Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416470 | XP_003600862.1 | 98.264 | 288 | 5 | 0 | 1 | 288 | 1 | 288 | 0.0 | 583 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416470 | sp|O04202|EIF3F_ARATH | 75.945 | 291 | 66 | 1 | 2 | 288 | 3 | 293 | 2.00e-159 | 448 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416470 | B7FK44 | 98.264 | 288 | 5 | 0 | 1 | 288 | 1 | 288 | 0.0 | 583 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0416470 | 0.805327 | 1.408335e-49 | -8.615850e-47 |
| Msa0003030 | Msa0416470 | 0.817283 | 3.573408e-52 | -8.615850e-47 |
| Msa0003330 | Msa0416470 | 0.863093 | 3.182725e-64 | -8.615850e-47 |
| Msa0025060 | Msa0416470 | -0.804332 | 2.273224e-49 | -8.615850e-47 |
| Msa0025090 | Msa0416470 | -0.812217 | 4.736897e-51 | -8.615850e-47 |
| Msa0025690 | Msa0416470 | -0.826699 | 2.350901e-54 | -8.615850e-47 |
| Msa0037230 | Msa0416470 | 0.826409 | 2.756204e-54 | -8.615850e-47 |
| Msa0042510 | Msa0416470 | 0.850463 | 1.670371e-60 | -8.615850e-47 |
| Msa0053650 | Msa0416470 | -0.808840 | 2.541899e-50 | -8.615850e-47 |
| Msa0071640 | Msa0416470 | 0.832554 | 8.847639e-56 | -8.615850e-47 |
| Msa0079560 | Msa0416470 | 0.843069 | 1.757386e-58 | -8.615850e-47 |
| Msa0098210 | Msa0416470 | 0.820662 | 6.092576e-53 | -8.615850e-47 |
| Msa0099090 | Msa0416470 | -0.802513 | 5.412973e-49 | -8.615850e-47 |
| Msa0099270 | Msa0416470 | -0.805333 | 1.404063e-49 | -8.615850e-47 |
| Msa0127230 | Msa0416470 | 0.833889 | 4.114550e-56 | -8.615850e-47 |
| Msa0146910 | Msa0416470 | 0.816380 | 5.697787e-52 | -8.615850e-47 |
| Msa0148000 | Msa0416470 | -0.806675 | 7.332437e-50 | -8.615850e-47 |
| Msa0148190 | Msa0416470 | -0.808041 | 3.762280e-50 | -8.615850e-47 |
| Msa0153290 | Msa0416470 | -0.816327 | 5.855187e-52 | -8.615850e-47 |
| Msa0167800 | Msa0416470 | -0.807461 | 4.999012e-50 | -8.615850e-47 |
| Msa0167860 | Msa0416470 | 0.811563 | 6.577935e-51 | -8.615850e-47 |
| Msa0168320 | Msa0416470 | 0.839628 | 1.413974e-57 | -8.615850e-47 |
| Msa0169710 | Msa0416470 | 0.804628 | 1.971792e-49 | -8.615850e-47 |
| Msa0177940 | Msa0416470 | 0.835541 | 1.579983e-56 | -8.615850e-47 |
| Msa0182100 | Msa0416470 | 0.820977 | 5.156917e-53 | -8.615850e-47 |
| Msa0188740 | Msa0416470 | 0.845175 | 4.784329e-59 | -8.615850e-47 |
| Msa0192300 | Msa0416470 | 0.835941 | 1.251779e-56 | -8.615850e-47 |
| Msa0195030 | Msa0416470 | 0.858069 | 1.060678e-62 | -8.615850e-47 |
| Msa0225370 | Msa0416470 | -0.837713 | 4.418659e-57 | -8.615850e-47 |
| Msa0233550 | Msa0416470 | 0.808275 | 3.354515e-50 | -8.615850e-47 |
| Msa0237180 | Msa0416470 | 0.847142 | 1.394055e-59 | -8.615850e-47 |
| Msa0371490 | Msa0416470 | 0.849526 | 3.055232e-60 | -8.615850e-47 |
| Msa0376850 | Msa0416470 | 0.828108 | 1.079737e-54 | -8.615850e-47 |
| Msa0377370 | Msa0416470 | 0.802046 | 6.755045e-49 | -8.615850e-47 |
| Msa0377520 | Msa0416470 | 0.806425 | 8.276930e-50 | -8.615850e-47 |
| Msa0378620 | Msa0416470 | -0.866649 | 2.443871e-65 | -8.615850e-47 |
| Msa0380590 | Msa0416470 | 0.800733 | 1.255113e-48 | -8.615850e-47 |
| Msa0382670 | Msa0416470 | 0.932269 | 1.097226e-94 | -8.615850e-47 |
| Msa0387290 | Msa0416470 | 0.839963 | 1.156683e-57 | -8.615850e-47 |
| Msa0388520 | Msa0416470 | 0.830754 | 2.457342e-55 | -8.615850e-47 |
| Msa0389800 | Msa0416470 | 0.812099 | 5.026755e-51 | -8.615850e-47 |
| Msa0416470 | Msa0428530 | -0.820238 | 7.624855e-53 | -8.615850e-47 |
| Msa0416470 | Msa0432260 | -0.832545 | 8.892286e-56 | -8.615850e-47 |
| Msa0416470 | Msa0436830 | -0.816531 | 5.270747e-52 | -8.615850e-47 |
| Msa0416470 | Msa0468140 | 0.804245 | 2.369554e-49 | -8.615850e-47 |
| Msa0416470 | Msa0476730 | -0.846617 | 1.940827e-59 | -8.615850e-47 |
| Msa0416470 | Msa0511760 | 0.857259 | 1.843148e-62 | -8.615850e-47 |
| Msa0416470 | Msa0516830 | 0.829109 | 6.185405e-55 | -8.615850e-47 |
| Msa0416470 | Msa0521100 | -0.835808 | 1.352239e-56 | -8.615850e-47 |
| Msa0416470 | Msa0521730 | 0.841860 | 3.677433e-58 | -8.615850e-47 |
| Msa0416470 | Msa0540160 | -0.813189 | 2.903767e-51 | -8.615850e-47 |
| Msa0416470 | Msa0547920 | 0.816570 | 5.165670e-52 | -8.615850e-47 |
| Msa0416470 | Msa0549550 | -0.806077 | 9.801060e-50 | -8.615850e-47 |
| Msa0416470 | Msa0573550 | 0.826983 | 2.010173e-54 | -8.615850e-47 |
| Msa0416470 | Msa0574780 | 0.855283 | 6.997946e-62 | -8.615850e-47 |
| Msa0416470 | Msa0597240 | 0.812712 | 3.692330e-51 | -8.615850e-47 |
| Msa0416470 | Msa0602900 | 0.817736 | 2.824383e-52 | -8.615850e-47 |
| Msa0416470 | Msa0604890 | -0.811280 | 7.578091e-51 | -8.615850e-47 |
| Msa0416470 | Msa0609120 | 0.841989 | 3.400956e-58 | -8.615850e-47 |
| Msa0416470 | Msa0619230 | 0.850103 | 2.107797e-60 | -8.615850e-47 |
| Msa0416470 | Msa0621190 | 0.882926 | 6.913221e-71 | -8.615850e-47 |
| Msa0416470 | Msa0641030 | -0.814167 | 1.768471e-51 | -8.615850e-47 |
| Msa0416470 | Msa0643960 | 0.816728 | 4.762569e-52 | -8.615850e-47 |
| Msa0416470 | Msa0646180 | -0.829167 | 5.988137e-55 | -8.615850e-47 |
| Msa0416470 | Msa0656450 | 0.830151 | 3.451469e-55 | -8.615850e-47 |
| Msa0416470 | Msa0691760 | 0.866431 | 2.866228e-65 | -8.615850e-47 |
| Msa0416470 | Msa0700370 | 0.843662 | 1.220508e-58 | -8.615850e-47 |
| Msa0416470 | Msa0790450 | 0.832749 | 7.913887e-56 | -8.615850e-47 |
| Msa0416470 | Msa0834220 | 0.813362 | 2.659472e-51 | -8.615850e-47 |
| Msa0416470 | Msa0880050 | 0.844902 | 5.670615e-59 | -8.615850e-47 |
| Msa0416470 | Msa0881240 | 0.818747 | 1.668435e-52 | -8.615850e-47 |
| Msa0416470 | Msa0925420 | -0.808435 | 3.102046e-50 | -8.615850e-47 |
| Msa0416470 | Msa0929700 | 0.849882 | 2.431424e-60 | -8.615850e-47 |
| Msa0416470 | Msa0930090 | -0.815951 | 7.104211e-52 | -8.615850e-47 |
| Msa0416470 | Msa0930360 | 0.827175 | 1.808957e-54 | -8.615850e-47 |
| Msa0416470 | Msa0930790 | 0.814413 | 1.560576e-51 | -8.615850e-47 |
| Msa0416470 | Msa0982260 | 0.814010 | 1.915523e-51 | -8.615850e-47 |
| Msa0416470 | Msa1041830 | 0.801012 | 1.100485e-48 | -8.615850e-47 |
| Msa0416470 | Msa1055710 | -0.806046 | 9.948681e-50 | -8.615850e-47 |
| Msa0416470 | Msa1082050 | 0.838247 | 3.221529e-57 | -8.615850e-47 |
| Msa0416470 | Msa1124980 | 0.855965 | 4.427561e-62 | -8.615850e-47 |
| Msa0416470 | Msa1152860 | 0.815614 | 8.446047e-52 | -8.615850e-47 |
| Msa0416470 | Msa1167360 | 0.845044 | 5.190543e-59 | -8.615850e-47 |
| Msa0416470 | Msa1203090 | -0.814846 | 1.251310e-51 | -8.615850e-47 |
| Msa0416470 | Msa1203210 | -0.807411 | 5.121299e-50 | -8.615850e-47 |
| Msa0416470 | Msa1209560 | -0.811923 | 5.490274e-51 | -8.615850e-47 |
| Msa0416470 | Msa1225040 | 0.837966 | 3.804941e-57 | -8.615850e-47 |
| Msa0416470 | Msa1227350 | 0.801785 | 7.641649e-49 | -8.615850e-47 |
| Msa0416470 | Msa1235950 | 0.873088 | 1.927121e-67 | -8.615850e-47 |
| Msa0416470 | Msa1235980 | 0.875348 | 3.308316e-68 | -8.615850e-47 |
| Msa0416470 | Msa1237040 | 0.823562 | 1.295853e-53 | -8.615850e-47 |
| Msa0416470 | Msa1261970 | 0.828754 | 7.540004e-55 | -8.615850e-47 |
| Msa0416470 | Msa1276070 | -0.802107 | 6.564435e-49 | -8.615850e-47 |
| Msa0416470 | Msa1284800 | 0.818880 | 1.555919e-52 | -8.615850e-47 |
| Msa0416470 | Msa1295840 | -0.807332 | 5.322949e-50 | -8.615850e-47 |
| Msa0416470 | Msa1298910 | -0.821769 | 3.384985e-53 | -8.615850e-47 |
| Msa0416470 | Msa1307730 | 0.811957 | 5.398920e-51 | -8.615850e-47 |
| Msa0416470 | Msa1316100 | 0.850667 | 1.463781e-60 | -8.615850e-47 |
| Msa0416470 | Msa1317390 | 0.835631 | 1.499777e-56 | -8.615850e-47 |
| Msa0416470 | Msa1329930 | 0.804342 | 2.261879e-49 | -8.615850e-47 |
| Msa0416470 | Msa1330530 | -0.825121 | 5.569913e-54 | -8.615850e-47 |
| Msa0416470 | Msa1351020 | 0.819880 | 9.205698e-53 | -8.615850e-47 |
| Msa0416470 | Msa1359880 | -0.828567 | 8.367463e-55 | -8.615850e-47 |
| Msa0416470 | Msa1366540 | 0.809126 | 2.207816e-50 | -8.615850e-47 |
| Msa0416470 | Msa1387750 | 0.873572 | 1.325371e-67 | -8.615850e-47 |
| Msa0416470 | Msa1390760 | 0.853272 | 2.666486e-61 | -8.615850e-47 |
| Msa0416470 | Msa1403520 | 0.807670 | 4.513680e-50 | -8.615850e-47 |
| Msa0416470 | Msa1407550 | 0.864460 | 1.197046e-64 | -8.615850e-47 |
| Msa0416470 | Msa1413570 | 0.827429 | 1.572057e-54 | -8.615850e-47 |
| Msa0416470 | Msa1423050 | 0.843473 | 1.370991e-58 | -8.615850e-47 |
| Msa0416470 | Msa1425070 | 0.803060 | 4.174277e-49 | -8.615850e-47 |
| Msa0416470 | Msa1432310 | 0.803756 | 2.994109e-49 | -8.615850e-47 |
| Msa0416470 | Msa1446510 | 0.821585 | 3.733264e-53 | -8.615850e-47 |
| Msa0416470 | Msa1448840 | -0.803804 | 2.926372e-49 | -8.615850e-47 |
| Msa0416470 | Msa1450560 | 0.834905 | 2.286607e-56 | -8.615850e-47 |
| Msa0416470 | Msa1465700 | 0.892912 | 1.024243e-74 | -8.615850e-47 |
| Msa0239420 | Msa0416470 | 0.864530 | 1.137799e-64 | -8.615850e-47 |
| Msa0266380 | Msa0416470 | -0.861603 | 9.132854e-64 | -8.615850e-47 |
| Msa0270160 | Msa0416470 | 0.819195 | 1.319388e-52 | -8.615850e-47 |
| Msa0274940 | Msa0416470 | 0.854006 | 1.640071e-61 | -8.615850e-47 |
| Msa0278540 | Msa0416470 | 0.801086 | 1.062847e-48 | -8.615850e-47 |
| Msa0281370 | Msa0416470 | 0.821901 | 3.154768e-53 | -8.615850e-47 |
| Msa0301250 | Msa0416470 | 0.845754 | 3.333387e-59 | -8.615850e-47 |
| Msa0313060 | Msa0416470 | 0.830258 | 3.249865e-55 | -8.615850e-47 |
| Msa0315660 | Msa0416470 | 0.849675 | 2.776982e-60 | -8.615850e-47 |
| Msa0341860 | Msa0416470 | -0.854707 | 1.028824e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416470 | MtrunA17_Chr3g0113201 | 98.264 | 288 | 5 | 0 | 1 | 288 | 1 | 288 | 0.0 | 583 |
| Msa0416470 | MtrunA17_Chr5g0436671 | 88.542 | 288 | 29 | 1 | 1 | 288 | 1 | 284 | 0.0 | 520 |
| Msa0416470 | MtrunA17_Chr3g0113191 | 33.096 | 281 | 170 | 7 | 17 | 283 | 10 | 286 | 1.00e-34 | 127 |
| Msa0416470 | MtrunA17_Chr5g0436641 | 32.841 | 271 | 165 | 6 | 25 | 282 | 19 | 285 | 1.64e-34 | 127 |
| Msa0416470 | MtrunA17_Chr5g0436681 | 75.000 | 40 | 10 | 0 | 182 | 221 | 16 | 55 | 5.81e-13 | 62.8 |
| Msa0416470 | MtrunA17_Chr3g0079641 | 23.948 | 309 | 191 | 7 | 14 | 284 | 2 | 304 | 5.66e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416470 | AT2G39990.1 | 75.945 | 291 | 66 | 1 | 2 | 288 | 3 | 293 | 2.03e-160 | 448 |
| Msa0416470 | AT3G11270.2 | 32.979 | 282 | 169 | 7 | 17 | 282 | 5 | 282 | 1.82e-36 | 132 |
| Msa0416470 | AT3G11270.1 | 32.632 | 285 | 169 | 7 | 17 | 282 | 5 | 285 | 4.80e-36 | 131 |
| Msa0416470 | AT5G05780.2 | 31.560 | 282 | 173 | 7 | 17 | 282 | 5 | 282 | 1.33e-33 | 125 |
| Msa0416470 | AT5G05780.1 | 31.228 | 285 | 173 | 7 | 17 | 282 | 5 | 285 | 3.38e-33 | 124 |
| Msa0416470 | AT4G26430.1 | 24.342 | 304 | 191 | 7 | 16 | 284 | 4 | 303 | 2.23e-13 | 69.7 |
| Msa0416470 | AT5G56280.1 | 24.752 | 303 | 191 | 7 | 16 | 284 | 4 | 303 | 1.47e-12 | 67.4 |
Find 73 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCGTCATTGGAACGCTTCT+TGG | 0.210700 | 3_2:-63281276 | Msa0416470:CDS |
| ATGCTGATACTACAAGTTTC+TGG | 0.229094 | 3_2:+63275424 | None:intergenic |
| GTTGCACCAGACAACAAAAT+TGG | 0.229921 | 3_2:-63275850 | Msa0416470:CDS |
| ACAGTCAGAATTACAAAATC+TGG | 0.275877 | 3_2:+63275494 | None:intergenic |
| TGTCAACAGTGGTTGCCTTT+AGG | 0.305583 | 3_2:+63276045 | None:intergenic |
| GTTTGACACATAAGCTTTGA+TGG | 0.319915 | 3_2:+63276783 | None:intergenic |
| TTTCTTCTATATCTCGTATA+AGG | 0.321676 | 3_2:-63275337 | Msa0416470:three_prime_UTR |
| CTTGGATCTGTTCTTCCTGA+TGG | 0.343100 | 3_2:-63281258 | Msa0416470:CDS |
| GCTTGTGAACGACAGCTTAC+AGG | 0.343421 | 3_2:-63275767 | Msa0416470:intron |
| TCAACTGGACTTGGAGTAAC+TGG | 0.372693 | 3_2:-63276898 | Msa0416470:CDS |
| GTGTCAAACAATTTATCTCT+TGG | 0.383210 | 3_2:-63276769 | Msa0416470:CDS |
| TATTTATGCAGGTATTCAAC+TGG | 0.393038 | 3_2:-63276913 | Msa0416470:intron |
| ATTCATTTGACTGTTGATAC+AGG | 0.396286 | 3_2:-63276826 | Msa0416470:CDS |
| GATCAAGCTGAACGCGTCAT+TGG | 0.409335 | 3_2:-63281288 | Msa0416470:CDS |
| AACAGTCAAATGAATGGGAT+TGG | 0.410536 | 3_2:+63276834 | None:intergenic |
| TGCAGGTATTCAACTGGACT+TGG | 0.422441 | 3_2:-63276907 | Msa0416470:intron |
| AAAATCCCCTCTGACTTAGA+AGG | 0.446924 | 3_2:-63276023 | Msa0416470:CDS |
| AGAAGGCATGGAAGCATCAA+TGG | 0.461890 | 3_2:-63276006 | Msa0416470:CDS |
| AATCAAAAGGAAGTCATAGT+TGG | 0.465079 | 3_2:-63277395 | Msa0416470:CDS |
| TGTATCAACAGTCAAATGAA+TGG | 0.465420 | 3_2:+63276828 | None:intergenic |
| TCCAACCTCCTCTGCGAACA+TGG | 0.475173 | 3_2:-63281430 | Msa0416470:exon |
| TTGCACCAGACAACAAAATT+GGG | 0.482472 | 3_2:-63275849 | Msa0416470:CDS |
| ATGGTTGAAGCTGAGCGAAT+TGG | 0.484794 | 3_2:-63276697 | Msa0416470:CDS |
| TCACAATGAATCCATTGATC+AGG | 0.486833 | 3_2:-63281202 | Msa0416470:intron |
| GAGGAACAGCATATGAATTA+CGG | 0.486958 | 3_2:+63281223 | None:intergenic |
| ACAATTTATCTCTTGGAGAC+AGG | 0.488454 | 3_2:-63276762 | Msa0416470:CDS |
| ACAGTCAAATGAATGGGATT+GGG | 0.491042 | 3_2:+63276835 | None:intergenic |
| CGAGGGAAGGACCTGATCAA+TGG | 0.491179 | 3_2:+63281191 | None:intergenic |
| TTCTCAGAGCTTATCCGCTA+AGG | 0.495822 | 3_2:-63281361 | Msa0416470:CDS |
| GTATCAACAGTCAAATGAAT+GGG | 0.496605 | 3_2:+63276829 | None:intergenic |
| CGGATATCAACAGTTCCATC+AGG | 0.497957 | 3_2:+63281243 | None:intergenic |
| CCCCTCTGACTTAGAAGGCA+TGG | 0.501688 | 3_2:-63276018 | Msa0416470:CDS |
| AAATATGACAAGGAAACCTC+CGG | 0.502350 | 3_2:+63275448 | None:intergenic |
| ATGACGCGTTCAGCTTGATC+AGG | 0.505348 | 3_2:+63281291 | None:intergenic |
| CACAAGAACTCAACTTAGCT+TGG | 0.506158 | 3_2:-63275539 | Msa0416470:CDS |
| GTTGATACAGGATTCACAAC+TGG | 0.510744 | 3_2:-63276814 | Msa0416470:CDS |
| ACAAGCTTATCAAAATCAGA+TGG | 0.513873 | 3_2:+63275784 | None:intergenic |
| CAAGCTTATCAAAATCAGAT+GGG | 0.536179 | 3_2:+63275785 | None:intergenic |
| AATTCCACTGGATCTTCGTA+TGG | 0.540296 | 3_2:-63276716 | Msa0416470:CDS |
| CTTCTCGAGAATAAAACTCA+TGG | 0.540683 | 3_2:+63276860 | None:intergenic |
| CAGTCAGAATTACAAAATCT+GGG | 0.544157 | 3_2:+63275495 | None:intergenic |
| ACACGTCTTGTGAGCAGCGA+AGG | 0.545362 | 3_2:-63281460 | Msa0416470:five_prime_UTR |
| GTTTCAGGATCACTTGCTCA+TGG | 0.545819 | 3_2:-63275578 | Msa0416470:intron |
| TGACGCCATGTTCGCAGAGG+AGG | 0.548240 | 3_2:+63281425 | None:intergenic |
| AATGTCAGTTGATATCCTAA+AGG | 0.558985 | 3_2:-63276060 | Msa0416470:intron |
| GGGACAACAACATATTATGA+TGG | 0.564682 | 3_2:+63277429 | None:intergenic |
| AATATGACAAGGAAACCTCC+GGG | 0.570671 | 3_2:+63275449 | None:intergenic |
| GCCATGTTCGCAGAGGAGGT+TGG | 0.571219 | 3_2:+63281429 | None:intergenic |
| ATACAGGATTCACAACTGGC+GGG | 0.571329 | 3_2:-63276810 | Msa0416470:CDS |
| GAATTGCAACACTGTGCGAT+TGG | 0.579767 | 3_2:+63281401 | None:intergenic |
| TCCATGCCTTCTAAGTCAGA+GGG | 0.582710 | 3_2:+63276017 | None:intergenic |
| TTCTGACTGTCTCTGAGCGA+AGG | 0.593642 | 3_2:-63275481 | Msa0416470:three_prime_UTR |
| CAAATATGTTGATGATGTTG+TGG | 0.594015 | 3_2:-63275952 | Msa0416470:intron |
| TGCGCATGGCAACGCATAGG+TGG | 0.594293 | 3_2:-63275361 | Msa0416470:three_prime_UTR |
| AAAAGGAAGTCATAGTTGGA+TGG | 0.597430 | 3_2:-63277391 | Msa0416470:intron |
| AGCGGATAAGCTCTGAGAAG+AGG | 0.597938 | 3_2:+63281365 | None:intergenic |
| TTCCATGCCTTCTAAGTCAG+AGG | 0.599344 | 3_2:+63276016 | None:intergenic |
| TACAGGATTCACAACTGGCG+GGG | 0.601574 | 3_2:-63276809 | Msa0416470:CDS |
| GACGAGAGGATGAACCTTAG+CGG | 0.606488 | 3_2:+63281347 | None:intergenic |
| AAATTTATATCAGATGCAGT+AGG | 0.618068 | 3_2:-63275826 | Msa0416470:CDS |
| GATACAGGATTCACAACTGG+CGG | 0.624066 | 3_2:-63276811 | Msa0416470:CDS |
| ACTGGACTTGGAGTAACTGG+TGG | 0.625290 | 3_2:-63276895 | Msa0416470:CDS |
| ACAGTTTCAAGAAATTCCAC+TGG | 0.631890 | 3_2:-63276728 | Msa0416470:CDS |
| AAGCTTATCAAAATCAGATG+GGG | 0.633795 | 3_2:+63275786 | None:intergenic |
| TGATCAATGGATTCATTGTG+AGG | 0.635583 | 3_2:+63281204 | None:intergenic |
| ACAGGATTCACAACTGGCGG+GGG | 0.635785 | 3_2:-63276808 | Msa0416470:CDS |
| AGCTTATCAAAATCAGATGG+GGG | 0.668310 | 3_2:+63275787 | None:intergenic |
| CAGATGTTGAATACGACGAG+AGG | 0.671951 | 3_2:+63281333 | None:intergenic |
| GGTTGACGCCATGTTCGCAG+AGG | 0.681472 | 3_2:+63281422 | None:intergenic |
| CCATGCCTTCTAAGTCAGAG+GGG | 0.694607 | 3_2:+63276018 | None:intergenic |
| TCAACCATACGAAGATCCAG+TGG | 0.695781 | 3_2:+63276712 | None:intergenic |
| AGTTTCTGGAAAATATGACA+AGG | 0.735731 | 3_2:+63275438 | None:intergenic |
| ATATGACAAGGAAACCTCCG+GGG | 0.760518 | 3_2:+63275450 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTATTGATAAAAAAAAAT+AGG | - | chr3_2:63277674-63277693 | Msa0416470:intron | 10.0% |
| !!! | TTTTAAATGAAAGAAAAAAA+TGG | + | chr3_2:63278537-63278556 | None:intergenic | 10.0% |
| !! | TTTGTGAAAATATTAAATTA+AGG | - | chr3_2:63280578-63280597 | Msa0416470:intron | 10.0% |
| !! | AATCATTAAAAATCAATATT+TGG | + | chr3_2:63280609-63280628 | None:intergenic | 10.0% |
| !! | TATTTATAAATAAGATGTGA+AGG | - | chr3_2:63275694-63275713 | Msa0416470:intron | 15.0% |
| !! | TAATAGATTTATTTATGTCT+TGG | - | chr3_2:63277603-63277622 | Msa0416470:intron | 15.0% |
| !!! | TTTGCTTATTGTTTTTAAAA+CGG | - | chr3_2:63278603-63278622 | Msa0416470:intron | 15.0% |
| !! | TGGTTAATATTAATATGAAA+TGG | - | chr3_2:63279602-63279621 | Msa0416470:intron | 15.0% |
| !! | AAAATACAACAAAAAAACAA+AGG | + | chr3_2:63281335-63281354 | None:intergenic | 15.0% |
| !! | AATATGTAATAGTAGAAAAA+AGG | + | chr3_2:63281460-63281479 | None:intergenic | 15.0% |
| !! | ATCACATATTAAAATGTAGA+TGG | + | chr3_2:63275553-63275572 | None:intergenic | 20.0% |
| !!! | ATAATTGTGAACTTTTTGTT+TGG | - | chr3_2:63275648-63275667 | Msa0416470:intron | 20.0% |
| !!! | TAGTTGAAATTTTAACAGAA+TGG | + | chr3_2:63275830-63275849 | None:intergenic | 20.0% |
| !!! | ATTGAATTTTTGTCTAGATA+AGG | - | chr3_2:63277408-63277427 | Msa0416470:CDS | 20.0% |
| !!! | TTGAATTTTTGTCTAGATAA+GGG | - | chr3_2:63277409-63277428 | Msa0416470:CDS | 20.0% |
| !! | GAAGGAAAAAAAATTATTAC+AGG | + | chr3_2:63277527-63277546 | None:intergenic | 20.0% |
| !! | TATAAGAGAAACTATTAAGA+AGG | - | chr3_2:63277994-63278013 | Msa0416470:intron | 20.0% |
| !!! | TGTTGTTTTTGTTGTAATTA+TGG | - | chr3_2:63278119-63278138 | Msa0416470:intron | 20.0% |
| !!! | TCAAACTCAGAATTTTTTTT+TGG | + | chr3_2:63278414-63278433 | None:intergenic | 20.0% |
| !! | AAAGTAAATACTTATCTCAT+CGG | - | chr3_2:63277288-63277307 | Msa0416470:intron | 20.0% |
| !!! | TTGCTTATTGTTTTTAAAAC+GGG | - | chr3_2:63278604-63278623 | Msa0416470:intron | 20.0% |
| !!! | ATTGAATTTTTGTCTAGATA+AGG | - | chr3_2:63277408-63277427 | Msa0416470:CDS | 20.0% |
| !!! | TTGAATTTTTGTCTAGATAA+GGG | - | chr3_2:63277409-63277428 | Msa0416470:CDS | 20.0% |
| !! | GTTTATTGATATCTAATTAG+AGG | - | chr3_2:63278926-63278945 | Msa0416470:intron | 20.0% |
| !!! | TTTAGCTGTAACTTTTTTTA+TGG | - | chr3_2:63279531-63279550 | Msa0416470:intron | 20.0% |
| !!! | TTAGCTGTAACTTTTTTTAT+GGG | - | chr3_2:63279532-63279551 | Msa0416470:intron | 20.0% |
| !!! | CATTTGTTTTATATACCAAT+GGG | + | chr3_2:63279562-63279581 | None:intergenic | 20.0% |
| !! | TGGTTAATATTAATACGAAA+TGG | - | chr3_2:63279644-63279663 | Msa0416470:intron | 20.0% |
| !!! | GGTTGATATTAATATACAAA+TGG | - | chr3_2:63279687-63279706 | Msa0416470:intron | 20.0% |
| !! | ATATTAATATACAAATGGAC+TGG | - | chr3_2:63279692-63279711 | Msa0416470:intron | 20.0% |
| !! | AATAATCAAAGTTTACACAA+GGG | + | chr3_2:63279786-63279805 | None:intergenic | 20.0% |
| !! | AAATAATCAAAGTTTACACA+AGG | + | chr3_2:63279787-63279806 | None:intergenic | 20.0% |
| !! | TAAACTTTGATTATTTATGC+AGG | - | chr3_2:63279791-63279810 | Msa0416470:intron | 20.0% |
| !!! | AAAAGCTAAGACTTTAAAAT+AGG | + | chr3_2:63280191-63280210 | None:intergenic | 20.0% |
| !!! | CTTAGCTTTTAATTATGTAA+TGG | - | chr3_2:63280201-63280220 | Msa0416470:intron | 20.0% |
| ! | ACATATTAAAATGTAGATGG+AGG | + | chr3_2:63275550-63275569 | None:intergenic | 25.0% |
| ! | ATACAACAATATCCTTACTT+TGG | + | chr3_2:63275677-63275696 | None:intergenic | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr3_2:63276531-63276550 | Msa0416470:intron | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | + | chr3_2:63276656-63276675 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr3_2:63276673-63276692 | Msa0416470:intron | 25.0% |
| ! | AAGAGAAAATATGAATGAGT+TGG | - | chr3_2:63276853-63276872 | Msa0416470:CDS | 25.0% |
| ! | TTCTGAACAAACACTTATAA+AGG | - | chr3_2:63277108-63277127 | Msa0416470:intron | 25.0% |
| !! | AAATAGATTTGCTCATGTAA+TGG | - | chr3_2:63277132-63277151 | Msa0416470:intron | 25.0% |
| !!! | TTTTAAAAGAGTTCCAAGTA+CGG | + | chr3_2:63277209-63277228 | None:intergenic | 25.0% |
| !! | TTCAAACTCAGAAGAAATTT+TGG | + | chr3_2:63277270-63277289 | None:intergenic | 25.0% |
| ! | AACAAAAACTTCAGGAATTT+AGG | + | chr3_2:63277382-63277401 | None:intergenic | 25.0% |
| ! | ATAAGATGAACAAAAACTTC+AGG | + | chr3_2:63277390-63277409 | None:intergenic | 25.0% |
| ! | TAAAAAAAAATAGGAGCGAA+TGG | - | chr3_2:63277683-63277702 | Msa0416470:intron | 25.0% |
| ! | CTTAAAAGAATCAGATAAGA+GGG | - | chr3_2:63277776-63277795 | Msa0416470:intron | 25.0% |
| !! | AGAGTTGTAATTTTCACAAA+TGG | + | chr3_2:63277814-63277833 | None:intergenic | 25.0% |
| ! | GGATCTAGATATTAATGAAT+TGG | - | chr3_2:63278015-63278034 | Msa0416470:intron | 25.0% |
| !! | TGGTTTTTGACATATTACTA+TGG | - | chr3_2:63278047-63278066 | Msa0416470:intron | 25.0% |
| !! | AAATAGATTTGCTCATGTAA+TGG | - | chr3_2:63277132-63277151 | Msa0416470:intron | 25.0% |
| !! | CTTTCAAACTCAAGAAATTT+TGG | + | chr3_2:63278480-63278499 | None:intergenic | 25.0% |
| !!! | CTAATTAGAGGTACTTTTTT+AGG | - | chr3_2:63278938-63278957 | Msa0416470:intron | 25.0% |
| !!! | AGTTTTGACTTTGATTGATA+AGG | - | chr3_2:63279061-63279080 | Msa0416470:intron | 25.0% |
| !!! | CCATTTGTTTTATATACCAA+TGG | + | chr3_2:63279563-63279582 | None:intergenic | 25.0% |
| ! | CCATTGGTATATAAAACAAA+TGG | - | chr3_2:63279560-63279579 | Msa0416470:intron | 25.0% |
| ! | TAATACGAAATGGTTTCTTT+AGG | - | chr3_2:63279654-63279673 | Msa0416470:intron | 25.0% |
| ! | AATACGAAATGGTTTCTTTA+GGG | - | chr3_2:63279655-63279674 | Msa0416470:intron | 25.0% |
| !!! | AATTGGATGTAAGTATTGAT+TGG | - | chr3_2:63280035-63280054 | Msa0416470:intron | 25.0% |
| !! | GACAAATAAAGCTTTATAGA+GGG | + | chr3_2:63280111-63280130 | None:intergenic | 25.0% |
| !! | TGACAAATAAAGCTTTATAG+AGG | + | chr3_2:63280112-63280131 | None:intergenic | 25.0% |
| ! | AACATTTACAGTTCTTTGTT+GGG | - | chr3_2:63280247-63280266 | Msa0416470:intron | 25.0% |
| !! | ATTGATTAATTTTTCATCGC+AGG | - | chr3_2:63280834-63280853 | Msa0416470:intron | 25.0% |
| ! | AAATTTATATCAGATGCAGT+AGG | - | chr3_2:63280889-63280908 | Msa0416470:intron | 25.0% |
| ! | TTTCTTCTATATCTCGTATA+AGG | - | chr3_2:63281378-63281397 | Msa0416470:CDS | 25.0% |
| ACAAGATTAGAGAGTAAGTT+GGG | - | chr3_2:63275865-63275884 | Msa0416470:intron | 30.0% | |
| ! | CTACCATCTTTTCTACTAAT+AGG | + | chr3_2:63275896-63275915 | None:intergenic | 30.0% |
| ! | AAACTAGACTTAGGTTGTTT+GGG | - | chr3_2:63275916-63275935 | Msa0416470:intron | 30.0% |
| TAGAAACAAGACGGAATATA+TGG | - | chr3_2:63276100-63276119 | Msa0416470:intron | 30.0% | |
| TGGAATGTAACTTCAGTAAA+AGG | - | chr3_2:63276120-63276139 | Msa0416470:intron | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | + | chr3_2:63276192-63276211 | None:intergenic | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | - | chr3_2:63276195-63276214 | Msa0416470:intron | 30.0% | |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | chr3_2:63276527-63276546 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr3_2:63276678-63276697 | None:intergenic | 30.0% |
| GTTCTATCAAAGACCATATT+TGG | + | chr3_2:63276713-63276732 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | - | chr3_2:63276717-63276736 | Msa0416470:CDS | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | - | chr3_2:63276720-63276739 | Msa0416470:CDS | 30.0% | |
| ! | TTTTCTCTTATAGCTTAGCT+AGG | + | chr3_2:63276842-63276861 | None:intergenic | 30.0% |
| !! | GATTATCACTGATTCAAAGA+AGG | + | chr3_2:63277545-63277564 | None:intergenic | 30.0% |
| ATCATTGTGAACTCTATGTT+TGG | - | chr3_2:63277631-63277650 | Msa0416470:intron | 30.0% | |
| ATACAACAATGTCATTACTC+TGG | + | chr3_2:63277660-63277679 | None:intergenic | 30.0% | |
| GCTTAAAAGAATCAGATAAG+AGG | - | chr3_2:63277775-63277794 | Msa0416470:intron | 30.0% | |
| ! | CAACCATCTTTTCTTACTAT+AGG | + | chr3_2:63277879-63277898 | None:intergenic | 30.0% |
| !! | AAACTAGACTTAGGTTGTTT+TGG | - | chr3_2:63275916-63275935 | Msa0416470:intron | 30.0% |
| GTTTCTCTTATAGCTTATCT+AGG | + | chr3_2:63277986-63278005 | None:intergenic | 30.0% | |
| TAATGAATTGGTGAAAGACA+TGG | - | chr3_2:63278027-63278046 | Msa0416470:intron | 30.0% | |
| !!! | TTTTAGCTTCAAAAGTGAGA+AGG | + | chr3_2:63278153-63278172 | None:intergenic | 30.0% |
| CATGCTTCTTATAAGCTATA+AGG | - | chr3_2:63278450-63278469 | Msa0416470:intron | 30.0% | |
| ATAAGATGAACAAACACTTG+AGG | + | chr3_2:63278760-63278779 | None:intergenic | 30.0% | |
| !!! | AGGAAGTTTTTTTCTCTTTG+CGG | - | chr3_2:63278958-63278977 | Msa0416470:intron | 30.0% |
| ! | TTTGACTTTGATTGATAAGG+TGG | - | chr3_2:63279064-63279083 | Msa0416470:intron | 30.0% |
| GTGTAAAAGTTATACGCTTA+AGG | - | chr3_2:63279107-63279126 | Msa0416470:intron | 30.0% | |
| !!! | CTTTTGATTCACTTTTTGGT+GGG | + | chr3_2:63279309-63279328 | None:intergenic | 30.0% |
| !! | CTTCCTTTTGATTCACTTTT+TGG | + | chr3_2:63279313-63279332 | None:intergenic | 30.0% |
| AATCAAAAGGAAGTCATAGT+TGG | - | chr3_2:63279320-63279339 | Msa0416470:intron | 30.0% | |
| AGTGATAACATTGACAACTA+TGG | + | chr3_2:63279372-63279391 | None:intergenic | 30.0% | |
| AAAATGTTCACTCTGATATC+TGG | - | chr3_2:63279462-63279481 | Msa0416470:intron | 30.0% | |
| TATTTATGCAGGTATTCAAC+TGG | - | chr3_2:63279802-63279821 | Msa0416470:intron | 30.0% | |
| GTATCAACAGTCAAATGAAT+GGG | + | chr3_2:63279889-63279908 | None:intergenic | 30.0% | |
| TGTATCAACAGTCAAATGAA+TGG | + | chr3_2:63279890-63279909 | None:intergenic | 30.0% | |
| ATTCATTTGACTGTTGATAC+AGG | - | chr3_2:63279889-63279908 | Msa0416470:intron | 30.0% | |
| GTGTCAAACAATTTATCTCT+TGG | - | chr3_2:63279946-63279965 | Msa0416470:intron | 30.0% | |
| AAGGAAAAAAGAAAGAAAGC+GGG | + | chr3_2:63280077-63280096 | None:intergenic | 30.0% | |
| GAAGGAAAAAAGAAAGAAAG+CGG | + | chr3_2:63280078-63280097 | None:intergenic | 30.0% | |
| AAAGAACTGTAAATGTTCAC+GGG | + | chr3_2:63280244-63280263 | None:intergenic | 30.0% | |
| CAAAGAACTGTAAATGTTCA+CGG | + | chr3_2:63280245-63280264 | None:intergenic | 30.0% | |
| GAACATTTACAGTTCTTTGT+TGG | - | chr3_2:63280246-63280265 | Msa0416470:intron | 30.0% | |
| ACATTTACAGTTCTTTGTTG+GGG | - | chr3_2:63280248-63280267 | Msa0416470:intron | 30.0% | |
| ATATACAGTATGGTGAAACT+TGG | + | chr3_2:63280407-63280426 | None:intergenic | 30.0% | |
| AAGCAAGTCTATATACAGTA+TGG | + | chr3_2:63280417-63280436 | None:intergenic | 30.0% | |
| CATCACTTTATTGTTTCCAT+TGG | - | chr3_2:63280456-63280475 | Msa0416470:intron | 30.0% | |
| ! | AATGTCAGTTGATATCCTAA+AGG | - | chr3_2:63280655-63280674 | Msa0416470:intron | 30.0% |
| !! | CAAATATGTTGATGATGTTG+TGG | - | chr3_2:63280763-63280782 | Msa0416470:intron | 30.0% |
| TACTACTCACTTTATTGTCT+AGG | - | chr3_2:63280806-63280825 | Msa0416470:intron | 30.0% | |
| ! | ATTAATTTTTCATCGCAGGA+AGG | - | chr3_2:63280838-63280857 | Msa0416470:intron | 30.0% |
| ! | TTAATTTTTCATCGCAGGAA+GGG | - | chr3_2:63280839-63280858 | Msa0416470:intron | 30.0% |
| !! | AATTTCCCAATTTTGTTGTC+TGG | + | chr3_2:63280874-63280893 | None:intergenic | 30.0% |
| AAGCTTATCAAAATCAGATG+GGG | + | chr3_2:63280932-63280951 | None:intergenic | 30.0% | |
| CAAGCTTATCAAAATCAGAT+GGG | + | chr3_2:63280933-63280952 | None:intergenic | 30.0% | |
| ACAAGCTTATCAAAATCAGA+TGG | + | chr3_2:63280934-63280953 | None:intergenic | 30.0% | |
| CAGTCAGAATTACAAAATCT+GGG | + | chr3_2:63281223-63281242 | None:intergenic | 30.0% | |
| ACAGTCAGAATTACAAAATC+TGG | + | chr3_2:63281224-63281243 | None:intergenic | 30.0% | |
| ! | AGTTTCTGGAAAATATGACA+AGG | + | chr3_2:63281280-63281299 | None:intergenic | 30.0% |
| !! | TTTTTGTTGTATTTTGCGCA+TGG | - | chr3_2:63281340-63281359 | Msa0416470:CDS | 30.0% |
| GAGGAACAGCATATGAATTA+CGG | + | chr3_2:63275495-63275514 | None:intergenic | 35.0% | |
| ! | TGATCAATGGATTCATTGTG+AGG | + | chr3_2:63275514-63275533 | None:intergenic | 35.0% |
| TCACAATGAATCCATTGATC+AGG | - | chr3_2:63275513-63275532 | Msa0416470:CDS | 35.0% | |
| TTTGTTTGGAAGCCAAAGTA+AGG | - | chr3_2:63275662-63275681 | Msa0416470:intron | 35.0% | |
| TCGTTTCAGTTTCATGAAAC+TGG | - | chr3_2:63275744-63275763 | Msa0416470:intron | 35.0% | |
| ATTGCTCGAACTAATCAGAT+AGG | - | chr3_2:63275788-63275807 | Msa0416470:CDS | 35.0% | |
| ACTAATCAGATAGGAGGAAT+TGG | - | chr3_2:63275797-63275816 | Msa0416470:CDS | 35.0% | |
| GACAAGATTAGAGAGTAAGT+TGG | - | chr3_2:63275864-63275883 | Msa0416470:intron | 35.0% | |
| GCACCTATTAGTAGAAAAGA+TGG | - | chr3_2:63275890-63275909 | Msa0416470:intron | 35.0% | |
| AGATGGTAGAAACTAGACTT+AGG | - | chr3_2:63275907-63275926 | Msa0416470:intron | 35.0% | |
| ! | GAAACTAGACTTAGGTTGTT+TGG | - | chr3_2:63275915-63275934 | Msa0416470:intron | 35.0% |
| ! | AAAGTACCACTTAAGCTGAA+AGG | - | chr3_2:63276012-63276031 | Msa0416470:CDS | 35.0% |
| AAGTACCACTTAAGCTGAAA+GGG | - | chr3_2:63276013-63276032 | Msa0416470:CDS | 35.0% | |
| AACTTCAGTAAAAGGAGAAG+TGG | - | chr3_2:63276128-63276147 | Msa0416470:intron | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | - | chr3_2:63276129-63276148 | Msa0416470:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | - | chr3_2:63276180-63276199 | Msa0416470:intron | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | + | chr3_2:63276191-63276210 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | + | chr3_2:63276193-63276212 | None:intergenic | 35.0% | |
| GTTACACGGTTTAGATATCT+TGG | - | chr3_2:63276194-63276213 | Msa0416470:intron | 35.0% | |
| !! | TTCTCCGTCATTTTGTACTA+TGG | + | chr3_2:63276222-63276241 | None:intergenic | 35.0% |
| TACATCATCGTATTCAAGCT+GGG | - | chr3_2:63276255-63276274 | Msa0416470:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | - | chr3_2:63276012-63276031 | Msa0416470:CDS | 35.0% |
| AACTTTCCTTTCAGCTTAAG+TGG | + | chr3_2:63276329-63276348 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | - | chr3_2:63276333-63276352 | Msa0416470:intron | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | - | chr3_2:63276468-63276487 | Msa0416470:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr3_2:63276520-63276539 | Msa0416470:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr3_2:63276540-63276559 | Msa0416470:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr3_2:63276545-63276564 | Msa0416470:intron | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | + | chr3_2:63276597-63276616 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | - | chr3_2:63276598-63276617 | Msa0416470:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | chr3_2:63276601-63276620 | Msa0416470:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr3_2:63276685-63276704 | Msa0416470:intron | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr3_2:63276697-63276716 | Msa0416470:CDS | 35.0% |
| AACGATAGTAGACCAAATAG+AGG | - | chr3_2:63276810-63276829 | Msa0416470:CDS | 35.0% | |
| ACGATAGTAGACCAAATAGA+GGG | - | chr3_2:63276811-63276830 | Msa0416470:CDS | 35.0% | |
| ! | TGGTTTTTGACATAACACCA+TGG | - | chr3_2:63276885-63276904 | Msa0416470:CDS | 35.0% |
| TCAGAAGTTCATGCTCTTAA+TGG | + | chr3_2:63277094-63277113 | None:intergenic | 35.0% | |
| CTAATTCCCACATTAAGTGT+GGG | + | chr3_2:63277183-63277202 | None:intergenic | 35.0% | |
| AGGAATTTAGGAACAGAACT+CGG | + | chr3_2:63277370-63277389 | None:intergenic | 35.0% | |
| AAAAAATAGGAGCGAATGGA+TGG | - | chr3_2:63277687-63277706 | Msa0416470:intron | 35.0% | |
| AAGAATCAGATAAGAGGGAA+TGG | - | chr3_2:63277781-63277800 | Msa0416470:intron | 35.0% | |
| TGACAACATTAGAAGAGAGT+TGG | - | chr3_2:63277846-63277865 | Msa0416470:intron | 35.0% | |
| GACAACATTAGAAGAGAGTT+GGG | - | chr3_2:63277847-63277866 | Msa0416470:intron | 35.0% | |
| ACAACATTAGAAGAGAGTTG+GGG | - | chr3_2:63277848-63277867 | Msa0416470:intron | 35.0% | |
| GCACCTATAGTAAGAAAAGA+TGG | - | chr3_2:63277873-63277892 | Msa0416470:intron | 35.0% | |
| AGATGGTTGAAACTAGACTT+AGG | - | chr3_2:63277890-63277909 | Msa0416470:intron | 35.0% | |
| !!! | TTTTAGCTTCGAAAGCAAGA+AGG | + | chr3_2:63278191-63278210 | None:intergenic | 35.0% |
| TTGCTTTCGAAGCTAAAACA+TGG | - | chr3_2:63278193-63278212 | Msa0416470:intron | 35.0% | |
| CTAATTCCCACATTAAGTGT+GGG | + | chr3_2:63277183-63277202 | None:intergenic | 35.0% | |
| !! | AGAGACCCACTTTCATTTTT+GGG | + | chr3_2:63278631-63278650 | None:intergenic | 35.0% |
| ! | AAGAGACCCACTTTCATTTT+TGG | + | chr3_2:63278632-63278651 | None:intergenic | 35.0% |
| AAAAATGAAAGTGGGTCTCT+TGG | - | chr3_2:63278631-63278650 | Msa0416470:intron | 35.0% | |
| AAAATGAAAGTGGGTCTCTT+GGG | - | chr3_2:63278632-63278651 | Msa0416470:intron | 35.0% | |
| TAGATCTGGGAAATTATAGG+AGG | + | chr3_2:63278691-63278710 | None:intergenic | 35.0% | |
| AACAAACACTTGAGGAACTT+AGG | + | chr3_2:63278752-63278771 | None:intergenic | 35.0% | |
| TCTGATTCATCTCATACAAG+AGG | + | chr3_2:63278837-63278856 | None:intergenic | 35.0% | |
| ! | AATTGTTCTGACCTTTTTCC+AGG | - | chr3_2:63279244-63279263 | Msa0416470:intron | 35.0% |
| GGGACAACAACATATTATGA+TGG | + | chr3_2:63279289-63279308 | None:intergenic | 35.0% | |
| !!! | CCTTTTGATTCACTTTTTGG+TGG | + | chr3_2:63279310-63279329 | None:intergenic | 35.0% |
| CCACCAAAAAGTGAATCAAA+AGG | - | chr3_2:63279307-63279326 | Msa0416470:intron | 35.0% | |
| AAAAGGAAGTCATAGTTGGA+TGG | - | chr3_2:63279324-63279343 | Msa0416470:intron | 35.0% | |
| !! | CTTTGAAATCCATATGACGT+AGG | - | chr3_2:63279436-63279455 | Msa0416470:intron | 35.0% |
| ! | CATTTTGAACCTACGTCATA+TGG | + | chr3_2:63279448-63279467 | None:intergenic | 35.0% |
| !!! | TTTTTTATGGGAAGACCCAT+TGG | - | chr3_2:63279544-63279563 | Msa0416470:intron | 35.0% |
| ! | GTTTCTTTAGAGATCATCAC+TGG | - | chr3_2:63279582-63279601 | Msa0416470:intron | 35.0% |
| ! | GTTTCTTTAGAGATCATCAC+TGG | - | chr3_2:63279582-63279601 | Msa0416470:intron | 35.0% |
| CAAATACACCACTAAAGAAG+AGG | + | chr3_2:63279740-63279759 | None:intergenic | 35.0% | |
| CTCTTCTTTAGTGGTGTATT+TGG | - | chr3_2:63279738-63279757 | Msa0416470:intron | 35.0% | |
| CTTCTCGAGAATAAAACTCA+TGG | + | chr3_2:63279858-63279877 | None:intergenic | 35.0% | |
| ACAGTCAAATGAATGGGATT+GGG | + | chr3_2:63279883-63279902 | None:intergenic | 35.0% | |
| AACAGTCAAATGAATGGGAT+TGG | + | chr3_2:63279884-63279903 | None:intergenic | 35.0% | |
| ! | GTTTGACACATAAGCTTTGA+TGG | + | chr3_2:63279935-63279954 | None:intergenic | 35.0% |
| ACAATTTATCTCTTGGAGAC+AGG | - | chr3_2:63279953-63279972 | Msa0416470:intron | 35.0% | |
| ACAGTTTCAAGAAATTCCAC+TGG | - | chr3_2:63279987-63280006 | Msa0416470:intron | 35.0% | |
| ATAGAGGGAGAAGAATAAGA+AGG | + | chr3_2:63280096-63280115 | None:intergenic | 35.0% | |
| CAAGCTTCGGCAAATATATA+AGG | + | chr3_2:63280148-63280167 | None:intergenic | 35.0% | |
| ! | AATGTTCACGGGTTGTATAA+AGG | + | chr3_2:63280233-63280252 | None:intergenic | 35.0% |
| CATTTACAGTTCTTTGTTGG+GGG | - | chr3_2:63280249-63280268 | Msa0416470:intron | 35.0% | |
| GAGAAAATCAATCCAGTAGT+AGG | - | chr3_2:63280293-63280312 | Msa0416470:intron | 35.0% | |
| ! | CAATTAGAGGCTTTGTCATT+TGG | + | chr3_2:63280382-63280401 | None:intergenic | 35.0% |
| GATTGACACAACATTACCAA+TGG | + | chr3_2:63280475-63280494 | None:intergenic | 35.0% | |
| TTGCACCAGACAACAAAATT+GGG | - | chr3_2:63280866-63280885 | Msa0416470:intron | 35.0% | |
| AGCTTATCAAAATCAGATGG+GGG | + | chr3_2:63280931-63280950 | None:intergenic | 35.0% | |
| ! | TGTTACTGTGTTTTACGAAG+TGG | - | chr3_2:63280986-63281005 | Msa0416470:intron | 35.0% |
| ! | GTTACTGTGTTTTACGAAGT+GGG | - | chr3_2:63280987-63281006 | Msa0416470:intron | 35.0% |
| !! | TCACCTAACATAGCTTTGTT+TGG | - | chr3_2:63281096-63281115 | Msa0416470:intron | 35.0% |
| CTTGGCAGAAAAATTGAACA+CGG | - | chr3_2:63281194-63281213 | Msa0416470:intron | 35.0% | |
| AAATATGACAAGGAAACCTC+CGG | + | chr3_2:63281270-63281289 | None:intergenic | 35.0% | |
| ATGCTGATACTACAAGTTTC+TGG | + | chr3_2:63281294-63281313 | None:intergenic | 35.0% | |
| TAAAATGTAGATGGAGGCGA+GGG | + | chr3_2:63275544-63275563 | None:intergenic | 40.0% | |
| TTAAAATGTAGATGGAGGCG+AGG | + | chr3_2:63275545-63275564 | None:intergenic | 40.0% | |
| TGTAGTAACGATAGTAGACC+AGG | - | chr3_2:63275973-63275992 | Msa0416470:CDS | 40.0% | |
| !! | ATTCCGTCTTGTTTCTACTC+AGG | + | chr3_2:63276097-63276116 | None:intergenic | 40.0% |
| TCTACCTTAGAGGTGAAAGT+TGG | - | chr3_2:63276152-63276171 | Msa0416470:intron | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | + | chr3_2:63276159-63276178 | None:intergenic | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | - | chr3_2:63276215-63276234 | Msa0416470:intron | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | - | chr3_2:63276254-63276273 | Msa0416470:intron | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | - | chr3_2:63276493-63276512 | Msa0416470:intron | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | - | chr3_2:63276494-63276513 | Msa0416470:intron | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | - | chr3_2:63276495-63276514 | Msa0416470:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr3_2:63276626-63276645 | Msa0416470:intron | 40.0% | |
| CGATAGTAGACCAAATAGAG+GGG | - | chr3_2:63276812-63276831 | Msa0416470:CDS | 40.0% | |
| !! | GAATGAGTTGGTGAAAGACA+TGG | - | chr3_2:63276865-63276884 | Msa0416470:CDS | 40.0% |
| ACATGAATCAAATGACGCCA+TGG | + | chr3_2:63276905-63276924 | None:intergenic | 40.0% | |
| GCGTCATTTGATTCATGTAG+CGG | - | chr3_2:63276907-63276926 | Msa0416470:intron | 40.0% | |
| TTTCAGCTTCAAAAGCGAGA+AGG | + | chr3_2:63277045-63277064 | None:intergenic | 40.0% | |
| !!! | TCGCTTTTGAAGCTGAAACA+TGG | - | chr3_2:63277047-63277066 | Msa0416470:intron | 40.0% |
| !!! | CTTTTGAAGCTGAAACATGG+AGG | - | chr3_2:63277050-63277069 | Msa0416470:intron | 40.0% |
| GCTAATTCCCACATTAAGTG+TGG | + | chr3_2:63277184-63277203 | None:intergenic | 40.0% | |
| ! | TTTTTGTCTAGATAAGGGCG+AGG | - | chr3_2:63277414-63277433 | Msa0416470:CDS | 40.0% |
| TCTGATTCCTCTCATACAAG+AGG | + | chr3_2:63277467-63277486 | None:intergenic | 40.0% | |
| TTCATTCCAGTTTCATGAGC+TGG | + | chr3_2:63277737-63277756 | None:intergenic | 40.0% | |
| TGTAACGAGAGTAGATCAGA+AGG | - | chr3_2:63277951-63277970 | Msa0416470:intron | 40.0% | |
| GCGTCATTTGATTCATGTAG+CGG | - | chr3_2:63276907-63276926 | Msa0416470:intron | 40.0% | |
| !! | AAGCCTTATTCCACTAAGTG+GGG | + | chr3_2:63278096-63278115 | None:intergenic | 40.0% |
| !! | CAAGCCTTATTCCACTAAGT+GGG | + | chr3_2:63278097-63278116 | None:intergenic | 40.0% |
| TCAGATGTTCACGCTCTTAA+TGG | + | chr3_2:63278241-63278260 | None:intergenic | 40.0% | |
| GCTAATTCCCACATTAAGTG+TGG | + | chr3_2:63277184-63277203 | None:intergenic | 40.0% | |
| GTAGAATCGTACCTTGATGA+GGG | + | chr3_2:63278661-63278680 | None:intergenic | 40.0% | |
| AGTAGAATCGTACCTTGATG+AGG | + | chr3_2:63278662-63278681 | None:intergenic | 40.0% | |
| CGCTAGATCTGGGAAATTAT+AGG | + | chr3_2:63278694-63278713 | None:intergenic | 40.0% | |
| ! | TTTTTGTCTAGATAAGGGCG+AGG | - | chr3_2:63277414-63277433 | Msa0416470:CDS | 40.0% |
| GAAGAAATAGACACGACTAC+AGG | + | chr3_2:63279142-63279161 | None:intergenic | 40.0% | |
| ! | TGATATCTGGAAGTGTGGAA+TGG | - | chr3_2:63279475-63279494 | Msa0416470:intron | 40.0% |
| ! | GTTTCTTTAGGGATCATCAC+TGG | - | chr3_2:63279666-63279685 | Msa0416470:intron | 40.0% |
| CTAAGTTGCCTCTTCTTTAG+TGG | - | chr3_2:63279729-63279748 | Msa0416470:intron | 40.0% | |
| ! | AGTGGTGTATTTGGTGATCT+TGG | - | chr3_2:63279747-63279766 | Msa0416470:intron | 40.0% |
| ! | GTGGTGTATTTGGTGATCTT+GGG | - | chr3_2:63279748-63279767 | Msa0416470:intron | 40.0% |
| GTTGATACAGGATTCACAAC+TGG | - | chr3_2:63279901-63279920 | Msa0416470:intron | 40.0% | |
| AATTCCACTGGATCTTCGTA+TGG | - | chr3_2:63279999-63280018 | Msa0416470:intron | 40.0% | |
| ACACTTACACTACCTACTAC+TGG | + | chr3_2:63280308-63280327 | None:intergenic | 40.0% | |
| GTGAAACTTGGCTCAATTAG+AGG | + | chr3_2:63280395-63280414 | None:intergenic | 40.0% | |
| TCACTTCTGAACCAAGCAAT+TGG | - | chr3_2:63280509-63280528 | Msa0416470:intron | 40.0% | |
| TGAAAAGACCTCCAATTGCT+TGG | + | chr3_2:63280523-63280542 | None:intergenic | 40.0% | |
| AAAATCCCCTCTGACTTAGA+AGG | - | chr3_2:63280692-63280711 | Msa0416470:intron | 40.0% | |
| GTTGCACCAGACAACAAAAT+TGG | - | chr3_2:63280865-63280884 | Msa0416470:intron | 40.0% | |
| AAATCAGATGGGGGCAATTT+GGG | + | chr3_2:63280922-63280941 | None:intergenic | 40.0% | |
| AAAATCAGATGGGGGCAATT+TGG | + | chr3_2:63280923-63280942 | None:intergenic | 40.0% | |
| CAGCCAAACAAAGCTATGTT+AGG | + | chr3_2:63281102-63281121 | None:intergenic | 40.0% | |
| ACACATGCTTCATCTGTTTC+AGG | - | chr3_2:63281122-63281141 | Msa0416470:intron | 40.0% | |
| CACAAGAACTCAACTTAGCT+TGG | - | chr3_2:63281176-63281195 | Msa0416470:intron | 40.0% | |
| AATATGACAAGGAAACCTCC+GGG | + | chr3_2:63281269-63281288 | None:intergenic | 40.0% | |
| GAATTGCAACACTGTGCGAT+TGG | + | chr3_2:63275317-63275336 | None:intergenic | 45.0% | |
| TTCTCAGAGCTTATCCGCTA+AGG | - | chr3_2:63275354-63275373 | Msa0416470:three_prime_UTR | 45.0% | |
| CAGATGTTGAATACGACGAG+AGG | + | chr3_2:63275385-63275404 | None:intergenic | 45.0% | |
| CTTGGATCTGTTCTTCCTGA+TGG | - | chr3_2:63275457-63275476 | Msa0416470:three_prime_UTR | 45.0% | |
| CGGATATCAACAGTTCCATC+AGG | + | chr3_2:63275475-63275494 | None:intergenic | 45.0% | |
| GCTCGAACTAATCAGATAGG+AGG | - | chr3_2:63275791-63275810 | Msa0416470:CDS | 45.0% | |
| TTCTTGTCGCACAAAACACC+TGG | + | chr3_2:63275994-63276013 | None:intergenic | 45.0% | |
| TACCACTTAAGCTGAAAGGG+AGG | - | chr3_2:63276016-63276035 | Msa0416470:CDS | 45.0% | |
| GCTGAAAGGGAGGAGTTAAA+CGG | - | chr3_2:63276026-63276045 | Msa0416470:CDS | 45.0% | |
| CTGAAAGGGAGGAGTTAAAC+GGG | - | chr3_2:63276027-63276046 | Msa0416470:CDS | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | - | chr3_2:63276258-63276277 | Msa0416470:intron | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | chr3_2:63276267-63276286 | Msa0416470:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | - | chr3_2:63276281-63276300 | Msa0416470:intron | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | + | chr3_2:63276300-63276319 | None:intergenic | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | - | chr3_2:63276367-63276386 | Msa0416470:intron | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | + | chr3_2:63276371-63276390 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | - | chr3_2:63276375-63276394 | Msa0416470:intron | 45.0% | |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | chr3_2:63276376-63276395 | Msa0416470:intron | 45.0% |
| CGCTTACTTTACTCTCGTGT+TGG | + | chr3_2:63276412-63276431 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | - | chr3_2:63276415-63276434 | Msa0416470:intron | 45.0% | |
| GTGGGAAGACTAGACATGAT+AGG | - | chr3_2:63276462-63276481 | Msa0416470:intron | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | - | chr3_2:63276496-63276515 | Msa0416470:intron | 45.0% | |
| GGTTTGGACATGTAGAGAGA+AGG | - | chr3_2:63276561-63276580 | Msa0416470:intron | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | chr3_2:63276610-63276629 | Msa0416470:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | chr3_2:63276620-63276639 | Msa0416470:intron | 45.0% | |
| !! | AAGCCTTATTCCACCAAGTG+GGG | + | chr3_2:63276934-63276953 | None:intergenic | 45.0% |
| !! | CAAGCCTTATTCCACCAAGT+GGG | + | chr3_2:63276935-63276954 | None:intergenic | 45.0% |
| TTAGCTGCCCACACTTAATG+TGG | - | chr3_2:63277173-63277192 | Msa0416470:intron | 45.0% | |
| TAGCTGCCCACACTTAATGT+GGG | - | chr3_2:63277174-63277193 | Msa0416470:intron | 45.0% | |
| ! | TGGGAATTAGCTTCCGTACT+TGG | - | chr3_2:63277193-63277212 | Msa0416470:intron | 45.0% |
| CGCTGCATCTGGGAAATTAT+AGG | + | chr3_2:63277324-63277343 | None:intergenic | 45.0% | |
| TCTGACACCTCTTGTATGAG+AGG | - | chr3_2:63277457-63277476 | Msa0416470:intron | 45.0% | |
| TTCACTCCAGCTCATGAAAC+TGG | - | chr3_2:63277728-63277747 | Msa0416470:intron | 45.0% | |
| !! | CCAAGCCTTATTCCACTAAG+TGG | + | chr3_2:63278098-63278117 | None:intergenic | 45.0% |
| CCACTTAGTGGAATAAGGCT+TGG | - | chr3_2:63278095-63278114 | Msa0416470:intron | 45.0% | |
| TTAGCTGCCCACACTTAATG+TGG | - | chr3_2:63277173-63277192 | Msa0416470:intron | 45.0% | |
| TAGCTGCCCACACTTAATGT+GGG | - | chr3_2:63277174-63277193 | Msa0416470:intron | 45.0% | |
| ACGGGACCCAAAAATGAAAG+TGG | - | chr3_2:63278622-63278641 | Msa0416470:intron | 45.0% | |
| CGGGACCCAAAAATGAAAGT+GGG | - | chr3_2:63278623-63278642 | Msa0416470:intron | 45.0% | |
| AGGAACTTAGGAACAGAACC+CGG | + | chr3_2:63278740-63278759 | None:intergenic | 45.0% | |
| ! | TGTTCTGACCTTTTTCCAGG+TGG | - | chr3_2:63279247-63279266 | Msa0416470:intron | 45.0% |
| CACTCTGATATCTGGAAGTG+TGG | - | chr3_2:63279470-63279489 | Msa0416470:intron | 45.0% | |
| ! | TCTGGAAGTGTGGAATGGAA+TGG | - | chr3_2:63279480-63279499 | Msa0416470:intron | 45.0% |
| ! | GTGTATTTGGTGATCTTGGG+AGG | - | chr3_2:63279751-63279770 | Msa0416470:intron | 45.0% |
| TGCAGGTATTCAACTGGACT+TGG | - | chr3_2:63279808-63279827 | Msa0416470:intron | 45.0% | |
| TCAACTGGACTTGGAGTAAC+TGG | - | chr3_2:63279817-63279836 | Msa0416470:intron | 45.0% | |
| GATACAGGATTCACAACTGG+CGG | - | chr3_2:63279904-63279923 | Msa0416470:intron | 45.0% | |
| ATACAGGATTCACAACTGGC+GGG | - | chr3_2:63279905-63279924 | Msa0416470:intron | 45.0% | |
| TCAACCATACGAAGATCCAG+TGG | + | chr3_2:63280006-63280025 | None:intergenic | 45.0% | |
| ATGGTTGAAGCTGAGCGAAT+TGG | - | chr3_2:63280018-63280037 | Msa0416470:intron | 45.0% | |
| CTTCTGAACCAAGCAATTGG+AGG | - | chr3_2:63280512-63280531 | Msa0416470:intron | 45.0% | |
| TGTCAACAGTGGTTGCCTTT+AGG | + | chr3_2:63280673-63280692 | None:intergenic | 45.0% | |
| ! | AGAGGGGATTTTGTCAACAG+TGG | + | chr3_2:63280684-63280703 | None:intergenic | 45.0% |
| TCCATGCCTTCTAAGTCAGA+GGG | + | chr3_2:63280701-63280720 | None:intergenic | 45.0% | |
| TTCCATGCCTTCTAAGTCAG+AGG | + | chr3_2:63280702-63280721 | None:intergenic | 45.0% | |
| !! | AGAAGGCATGGAAGCATCAA+TGG | - | chr3_2:63280709-63280728 | Msa0416470:intron | 45.0% |
| GTTTCAGGATCACTTGCTCA+TGG | - | chr3_2:63281137-63281156 | Msa0416470:intron | 45.0% | |
| ATATGACAAGGAAACCTCCG+GGG | + | chr3_2:63281268-63281287 | None:intergenic | 45.0% | |
| !! | TTCATTAAAAAAATTATTAT+AGG | + | chr3_2:63278897-63278916 | None:intergenic | 5.0% |
| !! | AGCGGATAAGCTCTGAGAAG+AGG | + | chr3_2:63275353-63275372 | None:intergenic | 50.0% |
| GACGAGAGGATGAACCTTAG+CGG | + | chr3_2:63275371-63275390 | None:intergenic | 50.0% | |
| ATGACGCGTTCAGCTTGATC+AGG | + | chr3_2:63275427-63275446 | None:intergenic | 50.0% | |
| GATCAAGCTGAACGCGTCAT+TGG | - | chr3_2:63275427-63275446 | Msa0416470:three_prime_UTR | 50.0% | |
| GCATGTAGAGAGAAGACGTC+TGG | - | chr3_2:63275938-63275957 | Msa0416470:intron | 50.0% | |
| CTCCTCCCTTTCAGCTTAAG+TGG | + | chr3_2:63276021-63276040 | None:intergenic | 50.0% | |
| AAAGGGAGGAGTTAAACGGG+AGG | - | chr3_2:63276030-63276049 | Msa0416470:CDS | 50.0% | |
| TAAACGGGAGGCTAGAGACT+TGG | - | chr3_2:63276042-63276061 | Msa0416470:CDS | 50.0% | |
| ! | AGGCAAGCCTTAGAAGCGTA+CGG | - | chr3_2:63276065-63276084 | Msa0416470:intron | 50.0% |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | + | chr3_2:63276094-63276113 | None:intergenic | 50.0% |
| CCGCCTGAGTAGAAACAAGA+CGG | - | chr3_2:63276091-63276110 | Msa0416470:intron | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | - | chr3_2:63276142-63276161 | Msa0416470:intron | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | - | chr3_2:63276362-63276381 | Msa0416470:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | chr3_2:63276423-63276442 | Msa0416470:intron | 50.0% |
| AGGATGTTGCGTTGGATGAG+TGG | - | chr3_2:63276443-63276462 | Msa0416470:intron | 50.0% | |
| GGATGTTGCGTTGGATGAGT+GGG | - | chr3_2:63276444-63276463 | Msa0416470:intron | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | + | chr3_2:63276588-63276607 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr3_2:63276762-63276781 | None:intergenic | 50.0% | |
| ACCGCCTTATCCCACTAAGT+GGG | + | chr3_2:63276767-63276786 | None:intergenic | 50.0% | |
| GCTAGGTCTTCCCCTCTATT+TGG | + | chr3_2:63276825-63276844 | None:intergenic | 50.0% | |
| !! | CCAAGCCTTATTCCACCAAG+TGG | + | chr3_2:63276936-63276955 | None:intergenic | 50.0% |
| ! | CCACTTGGTGGAATAAGGCT+TGG | - | chr3_2:63276933-63276952 | Msa0416470:intron | 50.0% |
| AAGTGGTTGTCGCTGCATCT+GGG | + | chr3_2:63277334-63277353 | None:intergenic | 50.0% | |
| AAAGTGGTTGTCGCTGCATC+TGG | + | chr3_2:63277335-63277354 | None:intergenic | 50.0% | |
| ATGCAGCGACAACCACTTTC+TGG | - | chr3_2:63277336-63277355 | Msa0416470:intron | 50.0% | |
| TCGGTGATCAAGCCAGAAAG+TGG | + | chr3_2:63277351-63277370 | None:intergenic | 50.0% | |
| CGAGAGTAGATCAGAAGGAG+AGG | - | chr3_2:63277956-63277975 | Msa0416470:intron | 50.0% | |
| GGACCCCACTTAGTGGAATA+AGG | - | chr3_2:63278090-63278109 | Msa0416470:intron | 50.0% | |
| CTCTTGGGAAACCCTCATCA+AGG | - | chr3_2:63278647-63278666 | Msa0416470:intron | 50.0% | |
| AAGTGGCTGTCGCTAGATCT+GGG | + | chr3_2:63278704-63278723 | None:intergenic | 50.0% | |
| AAAGTGGCTGTCGCTAGATC+TGG | + | chr3_2:63278705-63278724 | None:intergenic | 50.0% | |
| ! | ATCTAGCGACAGCCACTTTC+TGG | - | chr3_2:63278706-63278725 | Msa0416470:intron | 50.0% |
| !! | CCACTTTCTGGCTTGATCAC+CGG | - | chr3_2:63277348-63277367 | Msa0416470:intron | 50.0% |
| !! | CACTTTCTGGCTTGATCACC+GGG | - | chr3_2:63277349-63277368 | Msa0416470:intron | 50.0% |
| ACTGGACTTGGAGTAACTGG+TGG | - | chr3_2:63279820-63279839 | Msa0416470:intron | 50.0% | |
| TACAGGATTCACAACTGGCG+GGG | - | chr3_2:63279906-63279925 | Msa0416470:intron | 50.0% | |
| GAGCTTCAGGACACAAGCTT+CGG | + | chr3_2:63280161-63280180 | None:intergenic | 50.0% | |
| AATAGGCAACCACGAGCTTC+AGG | + | chr3_2:63280174-63280193 | None:intergenic | 50.0% | |
| CCATGCCTTCTAAGTCAGAG+GGG | + | chr3_2:63280700-63280719 | None:intergenic | 50.0% | |
| GCTTGTGAACGACAGCTTAC+AGG | - | chr3_2:63280948-63280967 | Msa0416470:intron | 50.0% | |
| TTCTGACTGTCTCTGAGCGA+AGG | - | chr3_2:63281234-63281253 | Msa0416470:CDS | 50.0% | |
| ! | GAGCGAAGGCAATTTTTCCC+CGG | - | chr3_2:63281248-63281267 | Msa0416470:CDS | 50.0% |
| ! | TTTTGCGCATGGCAACGCAT+AGG | - | chr3_2:63281351-63281370 | Msa0416470:CDS | 50.0% |
| ACACGTCTTGTGAGCAGCGA+AGG | - | chr3_2:63275255-63275274 | Msa0416470:three_prime_UTR | 55.0% | |
| TCCAACCTCCTCTGCGAACA+TGG | - | chr3_2:63275285-63275304 | Msa0416470:three_prime_UTR | 55.0% | |
| CGCGTCATTGGAACGCTTCT+TGG | - | chr3_2:63275439-63275458 | Msa0416470:three_prime_UTR | 55.0% | |
| CGAGGGAAGGACCTGATCAA+TGG | + | chr3_2:63275527-63275546 | None:intergenic | 55.0% | |
| ATGTAGATGGAGGCGAGGGA+AGG | + | chr3_2:63275540-63275559 | None:intergenic | 55.0% | |
| GCGGAAACCGTACGCTTCTA+AGG | + | chr3_2:63276075-63276094 | None:intergenic | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | - | chr3_2:63276349-63276368 | Msa0416470:intron | 55.0% | |
| !! | GTATGGTACGGAGTGTTGGG+CGG | - | chr3_2:63276379-63276398 | Msa0416470:intron | 55.0% |
| CGGAGATGAGGATGTTGCGT+TGG | - | chr3_2:63276435-63276454 | Msa0416470:intron | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | + | chr3_2:63276587-63276606 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr3_2:63276754-63276773 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr3_2:63276753-63276772 | Msa0416470:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr3_2:63276754-63276773 | Msa0416470:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr3_2:63276760-63276779 | Msa0416470:CDS | 55.0% | |
| CCGCCTTATCCCACTAAGTG+GGG | + | chr3_2:63276766-63276785 | None:intergenic | 55.0% | |
| CCCCACTTAGTGGGATAAGG+CGG | - | chr3_2:63276763-63276782 | Msa0416470:CDS | 55.0% | |
| CACCGCCTTATCCCACTAAG+TGG | + | chr3_2:63276768-63276787 | None:intergenic | 55.0% | |
| !! | TTCATGTAGCGGACCCCACT+TGG | - | chr3_2:63276918-63276937 | Msa0416470:intron | 55.0% |
| ! | GGACCCCACTTGGTGGAATA+AGG | - | chr3_2:63276928-63276947 | Msa0416470:intron | 55.0% |
| !! | ATGTAGCGGACCCCACTTAG+TGG | - | chr3_2:63278083-63278102 | Msa0416470:intron | 55.0% |
| CCGGTGATCAAGCCAGAAAG+TGG | + | chr3_2:63278721-63278740 | None:intergenic | 55.0% | |
| ! | GACCTTTTTCCAGGTGGCGT+TGG | - | chr3_2:63279253-63279272 | Msa0416470:intron | 55.0% |
| GTCCAACGCCACCTGGAAAA+AGG | + | chr3_2:63279258-63279277 | None:intergenic | 55.0% | |
| ACTCTATGTCCAACGCCACC+TGG | + | chr3_2:63279265-63279284 | None:intergenic | 55.0% | |
| ACAGGATTCACAACTGGCGG+GGG | - | chr3_2:63279907-63279926 | Msa0416470:intron | 55.0% | |
| AGCTTGTGTCCTGAAGCTCG+TGG | - | chr3_2:63280162-63280181 | Msa0416470:intron | 55.0% | |
| CCCCTCTGACTTAGAAGGCA+TGG | - | chr3_2:63280697-63280716 | Msa0416470:intron | 55.0% | |
| ! | CGAAGGCAATTTTTCCCCGG+AGG | - | chr3_2:63281251-63281270 | Msa0416470:CDS | 55.0% |
| GCCATGTTCGCAGAGGAGGT+TGG | + | chr3_2:63275289-63275308 | None:intergenic | 60.0% | |
| TGACGCCATGTTCGCAGAGG+AGG | + | chr3_2:63275293-63275312 | None:intergenic | 60.0% | |
| GGTTGACGCCATGTTCGCAG+AGG | + | chr3_2:63275296-63275315 | None:intergenic | 60.0% | |
| ACGGGAGGCTAGAGACTTGG+AGG | - | chr3_2:63276045-63276064 | Msa0416470:CDS | 60.0% | |
| !! | ATGTAGCGGACCCCACTTGG+TGG | - | chr3_2:63276921-63276940 | Msa0416470:intron | 60.0% |
| TGCGCATGGCAACGCATAGG+TGG | - | chr3_2:63281354-63281373 | Msa0416470:CDS | 60.0% | |
| GAGAAGGCCCGTAGACGCCG+TGG | - | chr3_2:63276577-63276596 | Msa0416470:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 63275211 | 63281526 | 63275211 | ID=Msa0416470;Name=Msa0416470 |
| chr3_2 | mRNA | 63275211 | 63281526 | 63275211 | ID=Msa0416470-mRNA-1;Parent=Msa0416470;Name=Msa0416470-mRNA-1;_AED=0.07;_eAED=0.07;_QI=93|1|1|1|1|1|6|293|288 |
| chr3_2 | exon | 63275211 | 63275593 | 63275211 | ID=Msa0416470-mRNA-1:exon:13775;Parent=Msa0416470-mRNA-1 |
| chr3_2 | exon | 63275768 | 63275881 | 63275768 | ID=Msa0416470-mRNA-1:exon:13774;Parent=Msa0416470-mRNA-1 |
| chr3_2 | exon | 63275953 | 63276074 | 63275953 | ID=Msa0416470-mRNA-1:exon:13773;Parent=Msa0416470-mRNA-1 |
| chr3_2 | exon | 63276695 | 63276924 | 63276695 | ID=Msa0416470-mRNA-1:exon:13772;Parent=Msa0416470-mRNA-1 |
| chr3_2 | exon | 63277392 | 63277471 | 63277392 | ID=Msa0416470-mRNA-1:exon:13771;Parent=Msa0416470-mRNA-1 |
| chr3_2 | exon | 63281203 | 63281526 | 63281203 | ID=Msa0416470-mRNA-1:exon:13770;Parent=Msa0416470-mRNA-1 |
| chr3_2 | five_prime_UTR | 63281434 | 63281526 | 63281434 | ID=Msa0416470-mRNA-1:five_prime_utr;Parent=Msa0416470-mRNA-1 |
| chr3_2 | CDS | 63281203 | 63281433 | 63281203 | ID=Msa0416470-mRNA-1:cds;Parent=Msa0416470-mRNA-1 |
| chr3_2 | CDS | 63277392 | 63277471 | 63277392 | ID=Msa0416470-mRNA-1:cds;Parent=Msa0416470-mRNA-1 |
| chr3_2 | CDS | 63276695 | 63276924 | 63276695 | ID=Msa0416470-mRNA-1:cds;Parent=Msa0416470-mRNA-1 |
| chr3_2 | CDS | 63275953 | 63276074 | 63275953 | ID=Msa0416470-mRNA-1:cds;Parent=Msa0416470-mRNA-1 |
| chr3_2 | CDS | 63275768 | 63275881 | 63275768 | ID=Msa0416470-mRNA-1:cds;Parent=Msa0416470-mRNA-1 |
| chr3_2 | CDS | 63275504 | 63275593 | 63275504 | ID=Msa0416470-mRNA-1:cds;Parent=Msa0416470-mRNA-1 |
| chr3_2 | three_prime_UTR | 63275211 | 63275503 | 63275211 | ID=Msa0416470-mRNA-1:three_prime_utr;Parent=Msa0416470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
