Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427980 | XP_039687650.1 | 98.927 | 466 | 4 | 1 | 1 | 466 | 1 | 465 | 0.0 | 938 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427980 | sp|Q38967|AAP2_ARATH | 69.247 | 465 | 137 | 3 | 11 | 469 | 29 | 493 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427980 | G8A1P0 | 98.927 | 466 | 4 | 1 | 1 | 466 | 1 | 465 | 0.0 | 938 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0076670 | Msa0427980 | 0.802657 | 5.056821e-49 | -8.615850e-47 |
| Msa0078610 | Msa0427980 | 0.835354 | 1.762557e-56 | -8.615850e-47 |
| Msa0100080 | Msa0427980 | 0.805167 | 1.521269e-49 | -8.615850e-47 |
| Msa0197660 | Msa0427980 | 0.815182 | 1.054096e-51 | -8.615850e-47 |
| Msa0220490 | Msa0427980 | 0.813647 | 2.303034e-51 | -8.615850e-47 |
| Msa0377530 | Msa0427980 | 0.806519 | 7.906741e-50 | -8.615850e-47 |
| Msa0378380 | Msa0427980 | 0.958841 | 8.656888e-117 | -8.615850e-47 |
| Msa0388030 | Msa0427980 | -0.847715 | 9.703132e-60 | -8.615850e-47 |
| Msa0422500 | Msa0427980 | 0.841124 | 5.745931e-58 | -8.615850e-47 |
| Msa0427730 | Msa0427980 | 0.924689 | 5.034970e-90 | -8.615850e-47 |
| Msa0427980 | Msa0428050 | 0.809895 | 1.509139e-50 | -8.615850e-47 |
| Msa0427980 | Msa0437150 | 0.822938 | 1.812061e-53 | -8.615850e-47 |
| Msa0427980 | Msa0445280 | 0.816752 | 4.703456e-52 | -8.615850e-47 |
| Msa0427980 | Msa0450350 | 0.837283 | 5.695298e-57 | -8.615850e-47 |
| Msa0427980 | Msa0511250 | 0.833326 | 5.687883e-56 | -8.615850e-47 |
| Msa0427980 | Msa0512870 | 0.802022 | 6.833380e-49 | -8.615850e-47 |
| Msa0427980 | Msa0517090 | 0.820912 | 5.338750e-53 | -8.615850e-47 |
| Msa0427980 | Msa0517490 | 0.818001 | 2.461460e-52 | -8.615850e-47 |
| Msa0427980 | Msa0518560 | 0.975308 | 1.024737e-139 | -8.615850e-47 |
| Msa0427980 | Msa0541040 | 0.809014 | 2.332115e-50 | -8.615850e-47 |
| Msa0427980 | Msa0597000 | 0.814434 | 1.543638e-51 | -8.615850e-47 |
| Msa0427980 | Msa0615220 | 0.805870 | 1.083134e-49 | -8.615850e-47 |
| Msa0427980 | Msa0626220 | 0.822223 | 2.657962e-53 | -8.615850e-47 |
| Msa0427980 | Msa0629630 | 0.807260 | 5.514397e-50 | -8.615850e-47 |
| Msa0427980 | Msa0715410 | 0.813748 | 2.187304e-51 | -8.615850e-47 |
| Msa0427980 | Msa0735160 | 0.803335 | 3.660825e-49 | -8.615850e-47 |
| Msa0427980 | Msa0779090 | 0.807624 | 4.615765e-50 | -8.615850e-47 |
| Msa0427980 | Msa0799060 | 0.830119 | 3.513672e-55 | -8.615850e-47 |
| Msa0427980 | Msa0856710 | 0.801124 | 1.044044e-48 | -8.615850e-47 |
| Msa0427980 | Msa0922030 | 0.814908 | 1.212008e-51 | -8.615850e-47 |
| Msa0427980 | Msa1021510 | 0.830003 | 3.749777e-55 | -8.615850e-47 |
| Msa0427980 | Msa1105500 | 0.823421 | 1.397534e-53 | -8.615850e-47 |
| Msa0427980 | Msa1152950 | 0.801237 | 9.897598e-49 | -8.615850e-47 |
| Msa0427980 | Msa1305350 | 0.801940 | 7.102695e-49 | -8.615850e-47 |
| Msa0427980 | Msa1307550 | 0.809539 | 1.799655e-50 | -8.615850e-47 |
| Msa0427980 | Msa1329670 | 0.804608 | 1.990941e-49 | -8.615850e-47 |
| Msa0427980 | Msa1338250 | 0.802155 | 6.415114e-49 | -8.615850e-47 |
| Msa0427980 | Msa1351090 | 0.832025 | 1.196280e-55 | -8.615850e-47 |
| Msa0427980 | Msa1435400 | 0.830508 | 2.822608e-55 | -8.615850e-47 |
| Msa0427980 | Msa1443610 | 0.800833 | 1.196956e-48 | -8.615850e-47 |
| Msa0427980 | Msa1448770 | 0.829470 | 5.057622e-55 | -8.615850e-47 |
| Msa0239800 | Msa0427980 | 0.815136 | 1.079201e-51 | -8.615850e-47 |
| Msa0268090 | Msa0427980 | 0.809654 | 1.700264e-50 | -8.615850e-47 |
| Msa0314120 | Msa0427980 | 0.829508 | 4.949851e-55 | -8.615850e-47 |
| Msa0317510 | Msa0427980 | 0.817238 | 3.658516e-52 | -8.615850e-47 |
| Msa0340690 | Msa0427980 | 0.814101 | 1.828873e-51 | -8.615850e-47 |
| Msa0340710 | Msa0427980 | 0.809737 | 1.632215e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427980 | MtrunA17_Chr3g0130651 | 98.927 | 466 | 4 | 1 | 1 | 466 | 1 | 465 | 0.0 | 938 |
| Msa0427980 | MtrunA17_Chr8g0384661 | 70.968 | 465 | 127 | 2 | 7 | 469 | 36 | 494 | 0.0 | 699 |
| Msa0427980 | MtrunA17_Chr3g0130641 | 71.368 | 468 | 131 | 2 | 4 | 469 | 11 | 477 | 0.0 | 698 |
| Msa0427980 | MtrunA17_Chr3g0125091 | 68.008 | 472 | 143 | 4 | 4 | 469 | 11 | 480 | 0.0 | 677 |
| Msa0427980 | MtrunA17_Chr3g0125081 | 67.516 | 471 | 146 | 3 | 4 | 469 | 11 | 479 | 0.0 | 677 |
| Msa0427980 | MtrunA17_Chr3g0125101 | 66.737 | 472 | 149 | 4 | 4 | 469 | 11 | 480 | 0.0 | 661 |
| Msa0427980 | MtrunA17_Chr4g0037201 | 63.674 | 479 | 163 | 3 | 2 | 469 | 34 | 512 | 0.0 | 645 |
| Msa0427980 | MtrunA17_Chr1g0159761 | 66.737 | 472 | 146 | 4 | 4 | 469 | 9 | 475 | 0.0 | 645 |
| Msa0427980 | MtrunA17_Chr3g0140761 | 56.438 | 466 | 196 | 4 | 7 | 465 | 13 | 478 | 0.0 | 540 |
| Msa0427980 | MtrunA17_Chr1g0146491 | 56.077 | 469 | 199 | 4 | 7 | 468 | 3 | 471 | 0.0 | 539 |
| Msa0427980 | MtrunA17_Chr1g0206871 | 54.585 | 458 | 192 | 5 | 26 | 468 | 14 | 470 | 6.30e-178 | 506 |
| Msa0427980 | MtrunA17_Chr1g0206821 | 49.903 | 517 | 192 | 7 | 16 | 465 | 11 | 527 | 6.21e-173 | 496 |
| Msa0427980 | MtrunA17_Chr3g0103231 | 51.121 | 446 | 211 | 3 | 15 | 455 | 11 | 454 | 1.67e-166 | 477 |
| Msa0427980 | MtrunA17_Chr1g0146411 | 49.467 | 469 | 224 | 6 | 2 | 465 | 9 | 469 | 1.87e-163 | 470 |
| Msa0427980 | MtrunA17_Chr3g0140531 | 49.682 | 471 | 227 | 5 | 1 | 465 | 1 | 467 | 2.75e-159 | 459 |
| Msa0427980 | MtrunA17_Chr3g0103211 | 50.340 | 441 | 212 | 3 | 20 | 455 | 16 | 454 | 1.95e-158 | 456 |
| Msa0427980 | MtrunA17_Chr3g0103221 | 49.775 | 444 | 216 | 3 | 25 | 463 | 28 | 469 | 2.61e-158 | 457 |
| Msa0427980 | MtrunA17_Chr5g0447221 | 50.000 | 438 | 210 | 5 | 24 | 455 | 26 | 460 | 4.79e-158 | 456 |
| Msa0427980 | MtrunA17_Chr1g0146331 | 49.115 | 452 | 220 | 5 | 21 | 465 | 14 | 462 | 1.24e-157 | 455 |
| Msa0427980 | MtrunA17_Chr2g0293331 | 49.556 | 450 | 222 | 3 | 20 | 465 | 5 | 453 | 1.05e-156 | 452 |
| Msa0427980 | MtrunA17_Chr1g0146391 | 48.444 | 450 | 227 | 3 | 21 | 466 | 6 | 454 | 8.56e-154 | 445 |
| Msa0427980 | MtrunA17_Chr3g0103271 | 49.660 | 441 | 214 | 4 | 21 | 455 | 21 | 459 | 4.97e-151 | 438 |
| Msa0427980 | MtrunA17_Chr3g0140541 | 47.660 | 470 | 233 | 5 | 1 | 465 | 5 | 466 | 3.36e-146 | 426 |
| Msa0427980 | MtrunA17_Chr1g0206851 | 51.630 | 368 | 165 | 5 | 108 | 468 | 19 | 380 | 1.40e-132 | 388 |
| Msa0427980 | MtrunA17_Chr5g0447231 | 44.266 | 436 | 235 | 4 | 26 | 455 | 24 | 457 | 2.86e-132 | 390 |
| Msa0427980 | MtrunA17_Chr5g0402151 | 64.407 | 295 | 70 | 4 | 30 | 322 | 3 | 264 | 6.00e-124 | 362 |
| Msa0427980 | MtrunA17_Chr1g0206831 | 54.573 | 328 | 136 | 5 | 140 | 460 | 14 | 335 | 7.64e-119 | 351 |
| Msa0427980 | MtrunA17_Chr3g0103251 | 49.143 | 350 | 142 | 4 | 140 | 455 | 20 | 367 | 1.98e-115 | 344 |
| Msa0427980 | MtrunA17_Chr3g0130671 | 69.869 | 229 | 69 | 0 | 7 | 235 | 19 | 247 | 2.05e-113 | 335 |
| Msa0427980 | MtrunA17_Chr3g0130661 | 66.854 | 178 | 57 | 1 | 291 | 466 | 1 | 178 | 1.03e-83 | 255 |
| Msa0427980 | MtrunA17_Chr6g0458931 | 29.185 | 466 | 286 | 11 | 12 | 463 | 17 | 452 | 6.88e-51 | 179 |
| Msa0427980 | MtrunA17_Chr8g0376991 | 28.319 | 452 | 286 | 10 | 23 | 466 | 15 | 436 | 7.37e-46 | 165 |
| Msa0427980 | MtrunA17_Chr2g0331721 | 28.289 | 456 | 282 | 10 | 23 | 466 | 39 | 461 | 8.98e-46 | 165 |
| Msa0427980 | MtrunA17_Chr4g0057851 | 28.959 | 442 | 276 | 10 | 28 | 463 | 11 | 420 | 2.18e-45 | 163 |
| Msa0427980 | MtrunA17_Chr3g0077651 | 28.409 | 440 | 285 | 7 | 28 | 463 | 53 | 466 | 2.26e-43 | 159 |
| Msa0427980 | MtrunA17_Chr1g0184721 | 27.468 | 466 | 298 | 12 | 10 | 465 | 2 | 437 | 2.48e-43 | 158 |
| Msa0427980 | MtrunA17_Chr7g0230011 | 29.677 | 465 | 269 | 12 | 21 | 462 | 10 | 439 | 1.90e-41 | 153 |
| Msa0427980 | MtrunA17_Chr6g0459021 | 29.175 | 473 | 294 | 12 | 1 | 463 | 3 | 444 | 2.95e-40 | 150 |
| Msa0427980 | MtrunA17_Chr5g0422741 | 29.299 | 471 | 289 | 13 | 6 | 466 | 3 | 439 | 1.19e-39 | 148 |
| Msa0427980 | MtrunA17_Chr6g0458921 | 29.252 | 441 | 277 | 9 | 28 | 463 | 15 | 425 | 2.12e-39 | 147 |
| Msa0427980 | MtrunA17_Chr3g0122921 | 27.696 | 473 | 279 | 13 | 4 | 466 | 9 | 428 | 2.49e-39 | 147 |
| Msa0427980 | MtrunA17_Chr6g0459031 | 28.540 | 452 | 284 | 10 | 21 | 463 | 4 | 425 | 8.73e-39 | 145 |
| Msa0427980 | MtrunA17_Chr6g0459011 | 29.953 | 424 | 259 | 10 | 43 | 460 | 1 | 392 | 1.09e-38 | 144 |
| Msa0427980 | MtrunA17_Chr2g0328081 | 29.204 | 452 | 281 | 10 | 21 | 463 | 4 | 425 | 9.95e-37 | 140 |
| Msa0427980 | MtrunA17_Chr1g0198531 | 27.447 | 470 | 290 | 14 | 10 | 466 | 6 | 437 | 1.85e-35 | 136 |
| Msa0427980 | MtrunA17_Chr6g0459001 | 27.992 | 493 | 297 | 10 | 2 | 463 | 8 | 473 | 5.17e-35 | 136 |
| Msa0427980 | MtrunA17_Chr1g0206841 | 64.516 | 93 | 33 | 0 | 16 | 108 | 10 | 102 | 6.40e-34 | 123 |
| Msa0427980 | MtrunA17_Chr4g0027241 | 27.716 | 451 | 289 | 14 | 26 | 467 | 39 | 461 | 1.98e-33 | 131 |
| Msa0427980 | MtrunA17_Chr1g0198541 | 25.738 | 474 | 299 | 12 | 7 | 466 | 3 | 437 | 1.20e-32 | 129 |
| Msa0427980 | MtrunA17_Chr3g0103261 | 45.255 | 137 | 74 | 1 | 15 | 151 | 11 | 146 | 3.27e-32 | 120 |
| Msa0427980 | MtrunA17_Chr8g0387941 | 26.360 | 478 | 304 | 16 | 10 | 468 | 2 | 450 | 5.73e-32 | 127 |
| Msa0427980 | MtrunA17_Chr1g0146351 | 58.000 | 100 | 41 | 1 | 37 | 136 | 13 | 111 | 5.01e-31 | 115 |
| Msa0427980 | MtrunA17_Chr1g0206861 | 46.875 | 128 | 65 | 2 | 6 | 132 | 2 | 127 | 4.15e-30 | 114 |
| Msa0427980 | MtrunA17_Chr1g0198081 | 27.416 | 445 | 272 | 18 | 38 | 466 | 70 | 479 | 2.63e-27 | 114 |
| Msa0427980 | MtrunA17_Chr4g0038711 | 24.580 | 476 | 303 | 14 | 16 | 464 | 55 | 501 | 8.64e-25 | 107 |
| Msa0427980 | MtrunA17_Chr3g0143701 | 25.107 | 466 | 277 | 18 | 21 | 455 | 74 | 498 | 8.87e-25 | 107 |
| Msa0427980 | MtrunA17_Chr5g0436281 | 25.962 | 416 | 261 | 13 | 58 | 465 | 4 | 380 | 1.01e-21 | 96.7 |
| Msa0427980 | MtrunA17_Chr5g0406351 | 23.831 | 449 | 282 | 16 | 27 | 452 | 107 | 518 | 5.32e-21 | 95.9 |
| Msa0427980 | MtrunA17_Chr5g0406331 | 23.877 | 423 | 267 | 16 | 28 | 430 | 87 | 474 | 6.10e-18 | 86.3 |
| Msa0427980 | MtrunA17_Chr3g0112971 | 25.161 | 465 | 292 | 18 | 17 | 465 | 9 | 433 | 2.24e-16 | 81.3 |
| Msa0427980 | MtrunA17_Chr1g0159751 | 47.561 | 82 | 34 | 2 | 270 | 349 | 1 | 75 | 1.10e-15 | 72.0 |
| Msa0427980 | MtrunA17_Chr4g0058161 | 23.591 | 479 | 306 | 18 | 1 | 465 | 15 | 447 | 6.22e-15 | 76.6 |
| Msa0427980 | MtrunA17_Chr2g0281341 | 22.538 | 457 | 303 | 13 | 27 | 464 | 95 | 519 | 1.54e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427980 | AT5G09220.1 | 69.247 | 465 | 137 | 3 | 11 | 469 | 29 | 493 | 0.0 | 689 |
| Msa0427980 | AT1G77380.1 | 69.612 | 464 | 136 | 2 | 11 | 469 | 13 | 476 | 0.0 | 671 |
| Msa0427980 | AT5G63850.1 | 67.982 | 456 | 140 | 3 | 20 | 469 | 11 | 466 | 0.0 | 667 |
| Msa0427980 | AT1G44100.1 | 64.375 | 480 | 160 | 3 | 1 | 469 | 1 | 480 | 0.0 | 652 |
| Msa0427980 | AT1G58360.1 | 55.629 | 453 | 195 | 3 | 21 | 467 | 30 | 482 | 0.0 | 537 |
| Msa0427980 | AT1G10010.1 | 56.541 | 451 | 190 | 3 | 21 | 465 | 21 | 471 | 0.0 | 535 |
| Msa0427980 | AT1G10010.2 | 56.541 | 451 | 190 | 3 | 21 | 465 | 22 | 472 | 0.0 | 535 |
| Msa0427980 | AT5G49630.1 | 56.276 | 478 | 196 | 8 | 1 | 465 | 1 | 478 | 0.0 | 531 |
| Msa0427980 | AT5G23810.1 | 47.732 | 463 | 226 | 7 | 1 | 452 | 1 | 458 | 1.20e-142 | 417 |
| Msa0427980 | AT5G23810.2 | 48.286 | 350 | 172 | 5 | 1 | 345 | 1 | 346 | 5.41e-108 | 325 |
| Msa0427980 | AT5G23810.4 | 47.308 | 260 | 130 | 4 | 1 | 257 | 1 | 256 | 9.44e-76 | 238 |
| Msa0427980 | AT5G23810.5 | 46.698 | 212 | 108 | 3 | 1 | 209 | 1 | 210 | 3.95e-59 | 194 |
| Msa0427980 | AT5G23810.3 | 46.698 | 212 | 108 | 3 | 1 | 209 | 1 | 210 | 3.95e-59 | 194 |
| Msa0427980 | AT1G24400.1 | 28.998 | 469 | 286 | 11 | 9 | 466 | 9 | 441 | 9.95e-47 | 167 |
| Msa0427980 | AT1G48640.1 | 28.178 | 472 | 293 | 9 | 12 | 466 | 11 | 453 | 1.84e-46 | 167 |
| Msa0427980 | AT5G40780.1 | 27.660 | 470 | 287 | 11 | 14 | 463 | 7 | 443 | 2.74e-46 | 167 |
| Msa0427980 | AT1G67640.1 | 29.747 | 474 | 292 | 10 | 1 | 466 | 1 | 441 | 8.12e-45 | 162 |
| Msa0427980 | AT5G40780.3 | 28.235 | 425 | 271 | 9 | 43 | 463 | 1 | 395 | 3.26e-42 | 154 |
| Msa0427980 | AT5G40780.2 | 28.235 | 425 | 271 | 9 | 43 | 463 | 1 | 395 | 3.26e-42 | 154 |
| Msa0427980 | AT3G01760.1 | 26.923 | 468 | 300 | 10 | 9 | 461 | 2 | 442 | 3.08e-41 | 153 |
| Msa0427980 | AT1G61270.1 | 28.507 | 442 | 276 | 9 | 28 | 461 | 34 | 443 | 1.17e-39 | 149 |
| Msa0427980 | AT1G71680.1 | 28.477 | 453 | 271 | 10 | 28 | 466 | 35 | 448 | 7.04e-38 | 144 |
| Msa0427980 | AT1G71680.2 | 30.539 | 334 | 193 | 8 | 28 | 347 | 35 | 343 | 1.11e-33 | 130 |
| Msa0427980 | AT1G08230.2 | 27.938 | 451 | 286 | 12 | 26 | 465 | 26 | 448 | 1.23e-31 | 126 |
| Msa0427980 | AT1G25530.1 | 26.258 | 457 | 298 | 11 | 13 | 463 | 14 | 437 | 4.08e-31 | 125 |
| Msa0427980 | AT5G41800.1 | 25.862 | 464 | 284 | 16 | 26 | 468 | 25 | 449 | 2.45e-26 | 111 |
| Msa0427980 | AT2G39890.2 | 25.061 | 411 | 271 | 11 | 58 | 465 | 63 | 439 | 4.34e-21 | 95.9 |
| Msa0427980 | AT2G39890.1 | 25.061 | 411 | 271 | 11 | 58 | 465 | 63 | 439 | 4.34e-21 | 95.9 |
| Msa0427980 | AT2G39890.3 | 25.061 | 411 | 271 | 11 | 58 | 465 | 4 | 380 | 6.22e-21 | 94.7 |
| Msa0427980 | AT1G08230.4 | 29.582 | 311 | 193 | 7 | 163 | 465 | 37 | 329 | 7.05e-21 | 94.0 |
| Msa0427980 | AT1G08230.6 | 29.582 | 311 | 193 | 7 | 163 | 465 | 37 | 329 | 7.05e-21 | 94.0 |
| Msa0427980 | AT1G08230.5 | 29.582 | 311 | 193 | 7 | 163 | 465 | 37 | 329 | 7.05e-21 | 94.0 |
| Msa0427980 | AT1G08230.3 | 29.582 | 311 | 193 | 7 | 163 | 465 | 56 | 348 | 8.42e-21 | 94.0 |
| Msa0427980 | AT2G36590.1 | 25.000 | 396 | 256 | 13 | 33 | 422 | 30 | 390 | 4.11e-20 | 92.8 |
| Msa0427980 | AT3G55740.2 | 24.519 | 416 | 267 | 12 | 58 | 465 | 4 | 380 | 7.07e-20 | 91.7 |
| Msa0427980 | AT3G55740.3 | 24.519 | 416 | 267 | 12 | 58 | 465 | 4 | 380 | 7.07e-20 | 91.7 |
| Msa0427980 | AT3G55740.1 | 25.000 | 416 | 265 | 13 | 58 | 465 | 60 | 436 | 7.63e-20 | 92.0 |
| Msa0427980 | AT4G35180.1 | 24.429 | 438 | 286 | 11 | 27 | 451 | 57 | 462 | 6.38e-15 | 77.4 |
| Msa0427980 | AT1G47670.1 | 22.976 | 457 | 301 | 13 | 27 | 464 | 93 | 517 | 1.03e-11 | 67.4 |
| Msa0427980 | AT5G02170.1 | 21.749 | 423 | 290 | 10 | 2 | 422 | 105 | 488 | 5.71e-11 | 65.1 |
Find 109 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCATTTATAACTCCATTT+TGG | 0.096747 | 3_2:-78716234 | None:intergenic |
| TCTTTCACCTATTCCTTTAT+TGG | 0.119863 | 3_2:+78715155 | Msa0427980:CDS |
| TCCTTTCTTCAATGATGTTT+TGG | 0.143872 | 3_2:+78716134 | Msa0427980:CDS |
| CTACAATGACTTGTTCATTT+TGG | 0.151530 | 3_2:-78716717 | None:intergenic |
| TCCTTCAAGGGTAGCCTTAC+AGG | 0.203563 | 3_2:+78715311 | Msa0427980:CDS |
| TCAAATTCTCATTGAAATTC+AGG | 0.204663 | 3_2:+78715421 | Msa0427980:CDS |
| ACCTATTCCTTTATTGGCCT+TGG | 0.221167 | 3_2:+78715161 | Msa0427980:CDS |
| GAATTTGAGAAAAGAAAATT+TGG | 0.225678 | 3_2:-78715085 | None:intergenic |
| TAAATTTGAAGATTCTTTCT+TGG | 0.240994 | 3_2:-78716495 | None:intergenic |
| TACTTGGAGCAGTAGGGTTT+TGG | 0.256465 | 3_2:+78716160 | Msa0427980:CDS |
| ACTGGAAAATAGACTGTTAA+AGG | 0.269131 | 3_2:-78716183 | None:intergenic |
| GGAAGCTGTTCACACCATTC+TGG | 0.269142 | 3_2:+78713797 | Msa0427980:CDS |
| TCCCAAAATGGAGTTATAAA+TGG | 0.282029 | 3_2:+78716232 | Msa0427980:CDS |
| GTCATCATCATCATACAAAT+TGG | 0.302533 | 3_2:-78713371 | None:intergenic |
| GAATACCGAATTCCAATTCC+TGG | 0.303298 | 3_2:+78716027 | Msa0427980:CDS |
| ACAACAAAGAAACCTGCTTT+TGG | 0.304532 | 3_2:+78712141 | Msa0427980:five_prime_UTR |
| GCAATATCAATGAGCCAATA+TGG | 0.308652 | 3_2:-78715895 | None:intergenic |
| CACACCTATACTTATCTTTG+TGG | 0.330592 | 3_2:-78715782 | None:intergenic |
| TAAATCTATTCAGATTAATA+TGG | 0.331283 | 3_2:+78716067 | Msa0427980:CDS |
| GTTCAGTACACAAATCTTTA+CGG | 0.334346 | 3_2:+78714280 | Msa0427980:CDS |
| GCTCAGTTGGGTTGGGTGAT+TGG | 0.347023 | 3_2:+78713663 | Msa0427980:CDS |
| TTAGCTGAATGTTATCGAAT+TGG | 0.352508 | 3_2:+78713738 | Msa0427980:CDS |
| TAGGGTTGAAAACCAGGAAT+TGG | 0.354439 | 3_2:-78716039 | None:intergenic |
| CGAATTGGCGATCCTCATTA+CGG | 0.356500 | 3_2:+78713753 | Msa0427980:CDS |
| CTAAATATAACCTGCAACTT+TGG | 0.358818 | 3_2:-78715195 | None:intergenic |
| CTAGCAGTTGCCAAAGTTGC+AGG | 0.362617 | 3_2:+78715185 | Msa0427980:CDS |
| TGCTAGACCAAGGCCAATAA+AGG | 0.370826 | 3_2:-78715168 | None:intergenic |
| TGAAGATTCTTTCTTGGAAA+AGG | 0.373430 | 3_2:-78716489 | None:intergenic |
| TCTGAATAGATTTAGATTGT+AGG | 0.380758 | 3_2:-78716058 | None:intergenic |
| GTTTGGTAGGTGCCGTCAAT+TGG | 0.382448 | 3_2:-78713172 | None:intergenic |
| AATCTTTACGGAACTGCAAT+AGG | 0.394383 | 3_2:+78714292 | Msa0427980:CDS |
| CTGAATAGATTTAGATTGTA+GGG | 0.395935 | 3_2:-78716057 | None:intergenic |
| GTATCAGTTGTGGCTGTTGT+TGG | 0.403765 | 3_2:+78716291 | Msa0427980:CDS |
| TTGGGATTACTTGGAGCAGT+AGG | 0.409541 | 3_2:+78716153 | Msa0427980:CDS |
| AAAGAGAAACTATACTTTCA+TGG | 0.411359 | 3_2:+78713776 | Msa0427980:CDS |
| GTAATAATAATCACCTTGTT+TGG | 0.412941 | 3_2:-78713189 | None:intergenic |
| GAAAACCAGGAATTGGAATT+CGG | 0.418612 | 3_2:-78716032 | None:intergenic |
| TCCTGTAAGGCTACCCTTGA+AGG | 0.421245 | 3_2:-78715312 | None:intergenic |
| AATCTATACATGATAGCATT+TGG | 0.421990 | 3_2:+78715056 | Msa0427980:CDS |
| GCAATAGGATACACAATTGC+GGG | 0.428317 | 3_2:+78714307 | Msa0427980:CDS |
| GCTGAGACAGGGCAATAAAA+AGG | 0.429469 | 3_2:+78714982 | Msa0427980:intron |
| CTAGCACTATTGTTATTCAA+TGG | 0.436547 | 3_2:-78716455 | None:intergenic |
| AGAAGGGTTGCGCGTATACT+TGG | 0.437084 | 3_2:-78715954 | None:intergenic |
| GGGCAATAGCTCAGTTGGGT+TGG | 0.438417 | 3_2:+78713655 | Msa0427980:CDS |
| GAAGCTGTTCACACCATTCT+GGG | 0.441958 | 3_2:+78713798 | Msa0427980:CDS |
| GACAGAAAATGGTTCCTTCA+AGG | 0.449757 | 3_2:+78715298 | Msa0427980:intron |
| TTTCTCGACGAAAGCAAAGA+AGG | 0.450672 | 3_2:-78715971 | None:intergenic |
| TCTGACTGTTTGCATTCCTC+AGG | 0.454495 | 3_2:+78715005 | Msa0427980:CDS |
| TATCAGTTGTGGCTGTTGTT+GGG | 0.456332 | 3_2:+78716292 | Msa0427980:CDS |
| CACATAATAACAGCAGTTGT+AGG | 0.459141 | 3_2:+78713609 | Msa0427980:CDS |
| GATCACTCACATCATGCTAA+TGG | 0.460901 | 3_2:-78714332 | None:intergenic |
| TGGGGAACTTTCCAAGCTCT+TGG | 0.462799 | 3_2:+78715371 | Msa0427980:CDS |
| TTTCAATAATCAGTTGTGAA+TGG | 0.464770 | 3_2:-78716354 | None:intergenic |
| TGCATGGGTTATGCAGCATT+TGG | 0.465101 | 3_2:+78715832 | Msa0427980:CDS |
| GGTTTCAATGACACCCTTTG+TGG | 0.466023 | 3_2:+78714253 | Msa0427980:CDS |
| ACCAAGGCCAATAAAGGAAT+AGG | 0.466847 | 3_2:-78715162 | None:intergenic |
| TAGTTTCTCTTTCCGTAATG+AGG | 0.467007 | 3_2:-78713765 | None:intergenic |
| GGCAATAGCTCAGTTGGGTT+GGG | 0.467438 | 3_2:+78713656 | Msa0427980:CDS |
| GCATTTGGAGACACAGCACC+AGG | 0.467683 | 3_2:+78715847 | Msa0427980:CDS |
| ATAACAGCAGTTGTAGGATC+AGG | 0.483816 | 3_2:+78713615 | Msa0427980:CDS |
| TTCCAATGCTTACTCCTGTA+AGG | 0.491026 | 3_2:-78715325 | None:intergenic |
| AGCATGGGCAATAGCTCAGT+TGG | 0.492596 | 3_2:+78713650 | Msa0427980:CDS |
| CAAGCCACAAAGATAAGTAT+AGG | 0.492781 | 3_2:+78715778 | Msa0427980:CDS |
| AGGCTATGTTGCCAAGAGCT+TGG | 0.496753 | 3_2:-78715382 | None:intergenic |
| ACAGAAAATGGTTCCTTCAA+GGG | 0.502482 | 3_2:+78715299 | Msa0427980:intron |
| CCCAAAACATCATTGAAGAA+AGG | 0.503059 | 3_2:-78716135 | None:intergenic |
| TAATAATCACCTTGTTTGGT+AGG | 0.503353 | 3_2:-78713185 | None:intergenic |
| GAAAGCAATAAATGTTACAT+TGG | 0.503783 | 3_2:-78716377 | None:intergenic |
| TTATATGCTTTGTGGCTGCA+TGG | 0.505265 | 3_2:+78715816 | Msa0427980:CDS |
| GATGACCGTCTCAAAAGAAC+AGG | 0.508021 | 3_2:+78713388 | Msa0427980:CDS |
| AGATTGTAGGGTTGAAAACC+AGG | 0.509683 | 3_2:-78716045 | None:intergenic |
| GTGAAATGCAGTCCAATTGA+CGG | 0.513494 | 3_2:+78713160 | Msa0427980:five_prime_UTR |
| GCTATCGTAATTCACCTTGT+GGG | 0.513660 | 3_2:+78715925 | Msa0427980:CDS |
| CAGGAGTGTTGTCGTTAGCA+TGG | 0.516340 | 3_2:+78713634 | Msa0427980:CDS |
| TAACATTTATTGCTTTCTTG+AGG | 0.518101 | 3_2:+78716383 | Msa0427980:three_prime_UTR |
| TGGGATTACTTGGAGCAGTA+GGG | 0.521905 | 3_2:+78716154 | Msa0427980:CDS |
| CGCTATCGTAATTCACCTTG+TGG | 0.523493 | 3_2:+78715924 | Msa0427980:CDS |
| GACTGTTTGCATTCCTCAGG+AGG | 0.526744 | 3_2:+78715008 | Msa0427980:CDS |
| GCATGGGCAATAGCTCAGTT+GGG | 0.527744 | 3_2:+78713651 | Msa0427980:CDS |
| TGATGAAGCAAGGAGGGGAG+CGG | 0.529139 | 3_2:+78716691 | Msa0427980:three_prime_UTR |
| TGTTTGATATACATCTCCAC+TGG | 0.530626 | 3_2:-78716201 | None:intergenic |
| GTTTCAATGACACCCTTTGT+GGG | 0.537172 | 3_2:+78714254 | Msa0427980:CDS |
| TATATGCTTTGTGGCTGCAT+GGG | 0.540477 | 3_2:+78715817 | Msa0427980:CDS |
| TGTGGCTGTTGTTGGGTCAG+TGG | 0.549777 | 3_2:+78716299 | Msa0427980:CDS |
| TTCTCGACGAAAGCAAAGAA+GGG | 0.555174 | 3_2:-78715970 | None:intergenic |
| TTACTGTGAAATCCAAAAGC+AGG | 0.556622 | 3_2:-78712153 | None:intergenic |
| AGCCTTACAGGAGTAAGCAT+TGG | 0.562434 | 3_2:+78715323 | Msa0427980:CDS |
| GTACTGAACTATCCCACAAA+GGG | 0.571823 | 3_2:-78714266 | None:intergenic |
| GCACCAGGGAACTTACTCAC+TGG | 0.573888 | 3_2:+78715862 | Msa0427980:CDS |
| CTGAAGAAAATCATAACTGA+AGG | 0.583795 | 3_2:-78713687 | None:intergenic |
| AGGAGTGTTGTCGTTAGCAT+GGG | 0.586525 | 3_2:+78713635 | Msa0427980:CDS |
| ATCTATTCAGATTAATATGG+AGG | 0.594981 | 3_2:+78716070 | Msa0427980:CDS |
| TCTAGAATTTGACATGGAGG+TGG | 0.597976 | 3_2:+78713309 | Msa0427980:exon |
| ATGTCTTGTAGTATCAGTTG+TGG | 0.607208 | 3_2:+78716281 | Msa0427980:CDS |
| AAATTGGAGTCTTTGTGTGA+AGG | 0.608942 | 3_2:-78713355 | None:intergenic |
| TTGACGGCACCTACCAAACA+AGG | 0.613543 | 3_2:+78713176 | Msa0427980:five_prime_UTR |
| ATTCCAGTGAGTAAGTTCCC+TGG | 0.614262 | 3_2:-78715865 | None:intergenic |
| TGCAATAGGATACACAATTG+CGG | 0.626230 | 3_2:+78714306 | Msa0427980:CDS |
| GTATAAAGAGTTACCCAGAA+TGG | 0.630066 | 3_2:-78713811 | None:intergenic |
| TTGAGAATATGAATATGCAA+AGG | 0.631765 | 3_2:-78715402 | None:intergenic |
| AACTTGGGTAGTGACTTATG+TGG | 0.644765 | 3_2:+78716417 | Msa0427980:three_prime_UTR |
| ATACTTGGTATGCTCCCACA+AGG | 0.667351 | 3_2:-78715939 | None:intergenic |
| TGTACTGAACTATCCCACAA+AGG | 0.675008 | 3_2:-78714267 | None:intergenic |
| CACAAGGTGAATTACGATAG+CGG | 0.685183 | 3_2:-78715923 | None:intergenic |
| CTTTGGCAACTGCTAGACCA+AGG | 0.697595 | 3_2:-78715178 | None:intergenic |
| ACACAATCTAGAATTTGACA+TGG | 0.702429 | 3_2:+78713303 | Msa0427980:exon |
| CATTTGGAGACACAGCACCA+GGG | 0.729488 | 3_2:+78715848 | Msa0427980:CDS |
| CAATCTAGAATTTGACATGG+AGG | 0.734277 | 3_2:+78713306 | Msa0427980:exon |
| AATCAACATTGCTATCACAG+TGG | 0.767055 | 3_2:-78716112 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTACAAGAAA+TGG | + | chr3_2:78712572-78712591 | Msa0427980:intron | 10.0% |
| !! | CAAAAAATAAATAGTAAAAT+TGG | - | chr3_2:78712911-78712930 | None:intergenic | 10.0% |
| !! | TGAATTTAATTAATGTAAAA+TGG | - | chr3_2:78713452-78713471 | None:intergenic | 10.0% |
| !!! | TAAATAGTAAAATTTTGAAA+TGG | + | chr3_2:78714177-78714196 | Msa0427980:intron | 10.0% |
| !!! | AAATCAATATCAATTTTTTT+GGG | - | chr3_2:78714436-78714455 | None:intergenic | 10.0% |
| !!! | AAAATCAATATCAATTTTTT+TGG | - | chr3_2:78714437-78714456 | None:intergenic | 10.0% |
| !!! | AAGATAATTTTATTCTTAAT+TGG | - | chr3_2:78714489-78714508 | None:intergenic | 10.0% |
| !!! | ATTTTATTCAATTTATCTTT+TGG | + | chr3_2:78714587-78714606 | Msa0427980:intron | 10.0% |
| !! | TAAAAATAAATTTGTAACAA+TGG | - | chr3_2:78714769-78714788 | None:intergenic | 10.0% |
| !!! | ATTGTTACAAATTTATTTTT+AGG | + | chr3_2:78714768-78714787 | Msa0427980:intron | 10.0% |
| !!! | AATCATCATTCATTTTTATT+AGG | + | chr3_2:78712270-78712289 | Msa0427980:intron | 15.0% |
| !! | GATATTATAATCAACAATAA+GGG | - | chr3_2:78712312-78712331 | None:intergenic | 15.0% |
| !! | AGATATTATAATCAACAATA+AGG | - | chr3_2:78712313-78712332 | None:intergenic | 15.0% |
| !!! | ATTGTTTTTTTTAACAAGAA+TGG | + | chr3_2:78712601-78712620 | Msa0427980:intron | 15.0% |
| !!! | ATTTTTTTTTTAAGGAAGAA+TGG | + | chr3_2:78712628-78712647 | Msa0427980:intron | 15.0% |
| !! | TCAATAATTCTTTCAAAAAA+TGG | - | chr3_2:78712742-78712761 | None:intergenic | 15.0% |
| !! | AAATAAATAGTAAAATTGGA+CGG | - | chr3_2:78712907-78712926 | None:intergenic | 15.0% |
| !! | ATTTGTAACCAAAATAATAA+TGG | - | chr3_2:78712964-78712983 | None:intergenic | 15.0% |
| !!! | CAATATTCACAATTTTTTTT+TGG | - | chr3_2:78713040-78713059 | None:intergenic | 15.0% |
| !! | TAAATCTATTCAGATTAATA+TGG | + | chr3_2:78716067-78716086 | Msa0427980:CDS | 15.0% |
| !! | CAAAAAATTAAATCAAACAA+CGG | - | chr3_2:78716673-78716692 | None:intergenic | 15.0% |
| !! | TTCATTCTTCTCAAATTTAT+TGG | + | chr3_2:78712239-78712258 | Msa0427980:intron | 20.0% |
| !!! | TGATTTTGGGTTTTTTTTAT+TGG | + | chr3_2:78712451-78712470 | Msa0427980:intron | 20.0% |
| !!! | ATGGCAGAATTTTTTTTTTA+AGG | + | chr3_2:78712620-78712639 | Msa0427980:intron | 20.0% |
| !!! | ACTATTTATTTTTTGTGCAA+AGG | + | chr3_2:78712916-78712935 | Msa0427980:intron | 20.0% |
| !!! | AAATAATAATGGAGTCAAAT+TGG | - | chr3_2:78712953-78712972 | None:intergenic | 20.0% |
| !!! | ATTTGACTCCATTATTATTT+TGG | + | chr3_2:78712953-78712972 | Msa0427980:intron | 20.0% |
| !!! | ATTATATGTATGATGATGAT+AGG | + | chr3_2:78713483-78713502 | Msa0427980:intron | 20.0% |
| !! | ATATGATAAAAAGTGACAAA+AGG | + | chr3_2:78713548-78713567 | Msa0427980:intron | 20.0% |
| !!! | ACTATTTTTGATATTCTGTT+TGG | + | chr3_2:78713960-78713979 | Msa0427980:intron | 20.0% |
| !! | TTTAATAATCACTACTAGAA+AGG | + | chr3_2:78714047-78714066 | Msa0427980:intron | 20.0% |
| !! | ACATATATAGAAATCAGATT+TGG | + | chr3_2:78714560-78714579 | Msa0427980:intron | 20.0% |
| !! | TTTGACAAAATTTGTAACAA+TGG | - | chr3_2:78714742-78714761 | None:intergenic | 20.0% |
| !!! | CAAGAATATTTAGTTTGATA+TGG | + | chr3_2:78714927-78714946 | Msa0427980:intron | 20.0% |
| !!! | TGTTTTAATTAAACTGGTTT+TGG | + | chr3_2:78714960-78714979 | Msa0427980:intron | 20.0% |
| !! | GAATTTGAGAAAAGAAAATT+TGG | - | chr3_2:78715088-78715107 | None:intergenic | 20.0% |
| !!! | ACCATATTAAGTTTTTATAC+CGG | + | chr3_2:78715576-78715595 | Msa0427980:intron | 20.0% |
| !! | TCTGAAAAAAGTTTATAAAC+CGG | - | chr3_2:78715626-78715645 | None:intergenic | 20.0% |
| !! | AGAAAATTGTGATAAAAAGA+TGG | + | chr3_2:78715989-78716008 | Msa0427980:CDS | 20.0% |
| !! | TAAATTTGAAGATTCTTTCT+TGG | - | chr3_2:78716498-78716517 | None:intergenic | 20.0% |
| !!! | TTTAATTTTTTGATGAAGCA+AGG | + | chr3_2:78716681-78716700 | Msa0427980:three_prime_UTR | 20.0% |
| !!! | CATCATTCATTTTTATTAGG+TGG | + | chr3_2:78712273-78712292 | Msa0427980:intron | 25.0% |
| !!! | TGTTTTAATTATACTCTGTC+TGG | + | chr3_2:78712807-78712826 | Msa0427980:intron | 25.0% |
| !!! | AAAAACCTCTTTTGTTTCTT+TGG | + | chr3_2:78713096-78713115 | Msa0427980:intron | 25.0% |
| ! | GTAATAATAATCACCTTGTT+TGG | - | chr3_2:78713192-78713211 | None:intergenic | 25.0% |
| ! | AGACAAAATAATTGAGAGAA+GGG | - | chr3_2:78713222-78713241 | None:intergenic | 25.0% |
| ! | AAAGAGAAACTATACTTTCA+TGG | + | chr3_2:78713776-78713795 | Msa0427980:CDS | 25.0% |
| ! | AAAATCGAACCAAATCAAAT+TGG | + | chr3_2:78713873-78713892 | Msa0427980:intron | 25.0% |
| ! | TTATGAAGCAATAGTGTTTA+TGG | + | chr3_2:78713905-78713924 | Msa0427980:intron | 25.0% |
| !! | ATATAGAAATCAGATTTGGT+TGG | + | chr3_2:78714564-78714583 | Msa0427980:intron | 25.0% |
| ! | AAAATTTGTAACAATGGATG+TGG | - | chr3_2:78714736-78714755 | None:intergenic | 25.0% |
| ! | TATTCTTGTCAACAGAAATA+AGG | - | chr3_2:78714915-78714934 | None:intergenic | 25.0% |
| !!! | TGAGTGTGTTTTAATTAAAC+TGG | + | chr3_2:78714954-78714973 | Msa0427980:intron | 25.0% |
| ! | AATCTATACATGATAGCATT+TGG | + | chr3_2:78715056-78715075 | Msa0427980:CDS | 25.0% |
| !!! | TTCCAGATTTTGATAAAATG+TGG | + | chr3_2:78715105-78715124 | Msa0427980:CDS | 25.0% |
| ! | TTGAGAATATGAATATGCAA+AGG | - | chr3_2:78715405-78715424 | None:intergenic | 25.0% |
| ! | TCAAATTCTCATTGAAATTC+AGG | + | chr3_2:78715421-78715440 | Msa0427980:CDS | 25.0% |
| !! | CCATATTAAGTTTTTATACC+GGG | + | chr3_2:78715577-78715596 | Msa0427980:intron | 25.0% |
| ! | ATGCATTCTTCTTATAAAAC+CGG | + | chr3_2:78715604-78715623 | Msa0427980:intron | 25.0% |
| !!! | TATAAACTTTTTTCAGAACG+TGG | + | chr3_2:78715629-78715648 | Msa0427980:intron | 25.0% |
| !!! | ATAAACTTTTTTCAGAACGT+GGG | + | chr3_2:78715630-78715649 | Msa0427980:intron | 25.0% |
| ! | TATGATAAATTTAACTCCAC+AGG | + | chr3_2:78715714-78715733 | Msa0427980:intron | 25.0% |
| !!! | TTCATTGTTTTTACTTCAGA+TGG | - | chr3_2:78715757-78715776 | None:intergenic | 25.0% |
| !! | CTGGAATTTTTAATCCATAT+TGG | + | chr3_2:78715881-78715900 | Msa0427980:CDS | 25.0% |
| !!! | CGGTATTCTTTGTTTATTTT+AGG | - | chr3_2:78716015-78716034 | None:intergenic | 25.0% |
| ! | CTGAATAGATTTAGATTGTA+GGG | - | chr3_2:78716060-78716079 | None:intergenic | 25.0% |
| ! | TCTGAATAGATTTAGATTGT+AGG | - | chr3_2:78716061-78716080 | None:intergenic | 25.0% |
| ! | ATCTATTCAGATTAATATGG+AGG | + | chr3_2:78716070-78716089 | Msa0427980:CDS | 25.0% |
| ! | AACAAAAAAAGATCCCAAAA+TGG | + | chr3_2:78716220-78716239 | Msa0427980:CDS | 25.0% |
| !! | TCCATTTATAACTCCATTTT+GGG | - | chr3_2:78716236-78716255 | None:intergenic | 25.0% |
| !! | ATCCATTTATAACTCCATTT+TGG | - | chr3_2:78716237-78716256 | None:intergenic | 25.0% |
| ! | TTTCAATAATCAGTTGTGAA+TGG | - | chr3_2:78716357-78716376 | None:intergenic | 25.0% |
| ! | GAAAGCAATAAATGTTACAT+TGG | - | chr3_2:78716380-78716399 | None:intergenic | 25.0% |
| ! | TAACATTTATTGCTTTCTTG+AGG | + | chr3_2:78716383-78716402 | Msa0427980:three_prime_UTR | 25.0% |
| TAGACACATAGAAAAAGAAG+TGG | + | chr3_2:78712476-78712495 | Msa0427980:intron | 30.0% | |
| ! | CATTAGTATGGGGTAATTTT+AGG | - | chr3_2:78712855-78712874 | None:intergenic | 30.0% |
| CTAAAATTACCCCATACTAA+TGG | + | chr3_2:78712853-78712872 | Msa0427980:intron | 30.0% | |
| !!! | TATACTTTTTCGGTACGAAT+TGG | - | chr3_2:78712884-78712903 | None:intergenic | 30.0% |
| !! | AATTGGACGGTATACTTTTT+CGG | - | chr3_2:78712894-78712913 | None:intergenic | 30.0% |
| ! | AATAATGGAGTCAAATTGGA+TGG | - | chr3_2:78712949-78712968 | None:intergenic | 30.0% |
| ! | TAATAATCACCTTGTTTGGT+AGG | - | chr3_2:78713188-78713207 | None:intergenic | 30.0% |
| TAATTGAGAGAAGGGTTATT+TGG | - | chr3_2:78713214-78713233 | None:intergenic | 30.0% | |
| GAGACAAAATAATTGAGAGA+AGG | - | chr3_2:78713223-78713242 | None:intergenic | 30.0% | |
| ! | GATTGTGTTCTAAATCTTTC+TGG | - | chr3_2:78713291-78713310 | None:intergenic | 30.0% |
| ! | ACACAATCTAGAATTTGACA+TGG | + | chr3_2:78713303-78713322 | Msa0427980:exon | 30.0% |
| GTCATCATCATCATACAAAT+TGG | - | chr3_2:78713374-78713393 | None:intergenic | 30.0% | |
| CTGAAGAAAATCATAACTGA+AGG | - | chr3_2:78713690-78713709 | None:intergenic | 30.0% | |
| TTAGCTGAATGTTATCGAAT+TGG | + | chr3_2:78713738-78713757 | Msa0427980:CDS | 30.0% | |
| TTCAACAGTCCAATTTGATT+TGG | - | chr3_2:78713885-78713904 | None:intergenic | 30.0% | |
| !!! | GTTTGCTGTTTCTTTTGAAA+AGG | + | chr3_2:78714019-78714038 | Msa0427980:intron | 30.0% |
| !!! | TGACTTTGTTTTTGACTTCT+TGG | - | chr3_2:78714087-78714106 | None:intergenic | 30.0% |
| ! | GAGAATCAAATGATTTTTGC+AGG | + | chr3_2:78714229-78714248 | Msa0427980:intron | 30.0% |
| ! | AATCAAATGATTTTTGCAGG+AGG | + | chr3_2:78714232-78714251 | Msa0427980:intron | 30.0% |
| GTTCAGTACACAAATCTTTA+CGG | + | chr3_2:78714280-78714299 | Msa0427980:CDS | 30.0% | |
| !! | TTTGCTGTTAATCATAACTG+AGG | + | chr3_2:78714691-78714710 | Msa0427980:intron | 30.0% |
| ! | TTGCTGTTAATCATAACTGA+GGG | + | chr3_2:78714692-78714711 | Msa0427980:intron | 30.0% |
| ! | TACTGGTGTTAGATATGTTA+TGG | - | chr3_2:78714887-78714906 | None:intergenic | 30.0% |
| ACAGAAATAAGGTCAATTAC+TGG | - | chr3_2:78714904-78714923 | None:intergenic | 30.0% | |
| ! | CACCACATTTTATCAAAATC+TGG | - | chr3_2:78715110-78715129 | None:intergenic | 30.0% |
| !! | CAGATTTTGATAAAATGTGG+TGG | + | chr3_2:78715108-78715127 | Msa0427980:CDS | 30.0% |
| TCTTTCACCTATTCCTTTAT+TGG | + | chr3_2:78715155-78715174 | Msa0427980:CDS | 30.0% | |
| CTAAATATAACCTGCAACTT+TGG | - | chr3_2:78715198-78715217 | None:intergenic | 30.0% | |
| ATAACATTCCATTTCTCAGA+AGG | + | chr3_2:78715237-78715256 | Msa0427980:intron | 30.0% | |
| AATTGTTCTACGACAGAAAA+TGG | + | chr3_2:78715287-78715306 | Msa0427980:intron | 30.0% | |
| !! | GTTTTGAACATAGAGAGAAA+AGG | - | chr3_2:78715451-78715470 | None:intergenic | 30.0% |
| ATTGGAAAAAACCTAAGACA+TGG | - | chr3_2:78715481-78715500 | None:intergenic | 30.0% | |
| CACCAAATTCAATAGTGTTT+GGG | - | chr3_2:78715515-78715534 | None:intergenic | 30.0% | |
| CCCGGTATAAAAACTTAATA+TGG | - | chr3_2:78715580-78715599 | None:intergenic | 30.0% | |
| !!! | TTCAGATGGTGGATTTTTTA+TGG | - | chr3_2:78715743-78715762 | None:intergenic | 30.0% |
| !!! | ATTGTTTTTACTTCAGATGG+TGG | - | chr3_2:78715754-78715773 | None:intergenic | 30.0% |
| ! | ACTGCATTTTATATGCTTTG+TGG | + | chr3_2:78715808-78715827 | Msa0427980:CDS | 30.0% |
| ! | TCCTTTCTTCAATGATGTTT+TGG | + | chr3_2:78716134-78716153 | Msa0427980:CDS | 30.0% |
| ! | CCTTTCTTCAATGATGTTTT+GGG | + | chr3_2:78716135-78716154 | Msa0427980:CDS | 30.0% |
| !!! | AATGATGTTTTGGGATTACT+TGG | + | chr3_2:78716144-78716163 | Msa0427980:CDS | 30.0% |
| ACTGGAAAATAGACTGTTAA+AGG | - | chr3_2:78716186-78716205 | None:intergenic | 30.0% | |
| ! | TTTAACAGTCTATTTTCCAG+TGG | + | chr3_2:78716185-78716204 | Msa0427980:CDS | 30.0% |
| TCCCAAAATGGAGTTATAAA+TGG | + | chr3_2:78716232-78716251 | Msa0427980:CDS | 30.0% | |
| ! | CTAGCACTATTGTTATTCAA+TGG | - | chr3_2:78716458-78716477 | None:intergenic | 30.0% |
| TGAAGATTCTTTCTTGGAAA+AGG | - | chr3_2:78716492-78716511 | None:intergenic | 30.0% | |
| TATATTTCTCCGTTATTGTG+AGG | + | chr3_2:78716532-78716551 | Msa0427980:intron | 30.0% | |
| ! | CAATTTGTTCCTCACAATAA+CGG | - | chr3_2:78716544-78716563 | None:intergenic | 30.0% |
| TATTGTGAGGAACAAATTGA+AGG | + | chr3_2:78716545-78716564 | Msa0427980:intron | 30.0% | |
| !!! | AATTTTTTGATGAAGCAAGG+AGG | + | chr3_2:78716684-78716703 | Msa0427980:three_prime_UTR | 30.0% |
| !!! | ATTTTTTGATGAAGCAAGGA+GGG | + | chr3_2:78716685-78716704 | Msa0427980:three_prime_UTR | 30.0% |
| ! | ACAACAAAGAAACCTGCTTT+TGG | + | chr3_2:78712141-78712160 | Msa0427980:five_prime_UTR | 35.0% |
| TTACTGTGAAATCCAAAAGC+AGG | - | chr3_2:78712156-78712175 | None:intergenic | 35.0% | |
| !!! | AAGAGTGAAGACACTGATTT+TGG | + | chr3_2:78712437-78712456 | Msa0427980:intron | 35.0% |
| !!! | AGAGTGAAGACACTGATTTT+GGG | + | chr3_2:78712438-78712457 | Msa0427980:intron | 35.0% |
| ! | TGTGTTCTAAATCTTTCTGG+AGG | - | chr3_2:78713288-78713307 | None:intergenic | 35.0% |
| ! | CAATCTAGAATTTGACATGG+AGG | + | chr3_2:78713306-78713325 | Msa0427980:exon | 35.0% |
| AAATTGGAGTCTTTGTGTGA+AGG | - | chr3_2:78713358-78713377 | None:intergenic | 35.0% | |
| !! | TAGTACCTGTTCTTTTGAGA+CGG | - | chr3_2:78713396-78713415 | None:intergenic | 35.0% |
| !!! | CAAAAGGTACTTTTTGAGAC+AGG | + | chr3_2:78713564-78713583 | Msa0427980:intron | 35.0% |
| CACATAATAACAGCAGTTGT+AGG | + | chr3_2:78713609-78713628 | Msa0427980:CDS | 35.0% | |
| ! | TTTTCTTCAGTCTCATCACT+TGG | + | chr3_2:78713700-78713719 | Msa0427980:CDS | 35.0% |
| TAGTTTCTCTTTCCGTAATG+AGG | - | chr3_2:78713768-78713787 | None:intergenic | 35.0% | |
| GTATAAAGAGTTACCCAGAA+TGG | - | chr3_2:78713814-78713833 | None:intergenic | 35.0% | |
| AATCTTTACGGAACTGCAAT+AGG | + | chr3_2:78714292-78714311 | Msa0427980:CDS | 35.0% | |
| TGCAATAGGATACACAATTG+CGG | + | chr3_2:78714306-78714325 | Msa0427980:CDS | 35.0% | |
| TAAAACTGATATCGTGCTTG+AGG | - | chr3_2:78714541-78714560 | None:intergenic | 35.0% | |
| ACAATGGATGTGGTACATAT+AGG | - | chr3_2:78714726-78714745 | None:intergenic | 35.0% | |
| !!! | TGCTTTTTCCTTCTGAGAAA+TGG | - | chr3_2:78715248-78715267 | None:intergenic | 35.0% |
| ACAGAAAATGGTTCCTTCAA+GGG | + | chr3_2:78715299-78715318 | Msa0427980:intron | 35.0% | |
| TGACAAAAGCCCAAAAAGTA+TGG | + | chr3_2:78715351-78715370 | Msa0427980:CDS | 35.0% | |
| ! | GACAAAAGCCCAAAAAGTAT+GGG | + | chr3_2:78715352-78715371 | Msa0427980:CDS | 35.0% |
| ! | ACAAAAGCCCAAAAAGTATG+GGG | + | chr3_2:78715353-78715372 | Msa0427980:CDS | 35.0% |
| !! | GAAAGTTCCCCATACTTTTT+GGG | - | chr3_2:78715363-78715382 | None:intergenic | 35.0% |
| AAACTAGTGTACCATGTCTT+AGG | + | chr3_2:78715467-78715486 | Msa0427980:intron | 35.0% | |
| AATAGTGTTTGGGCTTAAGT+GGG | - | chr3_2:78715505-78715524 | None:intergenic | 35.0% | |
| AGCCCAAACACTATTGAATT+TGG | + | chr3_2:78715510-78715529 | Msa0427980:intron | 35.0% | |
| GCACCAAATTCAATAGTGTT+TGG | - | chr3_2:78715516-78715535 | None:intergenic | 35.0% | |
| TGGTGCGTAGATATAAATTG+TGG | + | chr3_2:78715530-78715549 | Msa0427980:intron | 35.0% | |
| GGTGCGTAGATATAAATTGT+GGG | + | chr3_2:78715531-78715550 | Msa0427980:intron | 35.0% | |
| TAAGAAGAATGCATAAGACC+CGG | - | chr3_2:78715598-78715617 | None:intergenic | 35.0% | |
| CAAGCCACAAAGATAAGTAT+AGG | + | chr3_2:78715778-78715797 | Msa0427980:CDS | 35.0% | |
| CACACCTATACTTATCTTTG+TGG | - | chr3_2:78715785-78715804 | None:intergenic | 35.0% | |
| GCAATATCAATGAGCCAATA+TGG | - | chr3_2:78715898-78715917 | None:intergenic | 35.0% | |
| GAAAACCAGGAATTGGAATT+CGG | - | chr3_2:78716035-78716054 | None:intergenic | 35.0% | |
| AATCAACATTGCTATCACAG+TGG | - | chr3_2:78716115-78716134 | None:intergenic | 35.0% | |
| CCCAAAACATCATTGAAGAA+AGG | - | chr3_2:78716138-78716157 | None:intergenic | 35.0% | |
| TGTTTGATATACATCTCCAC+TGG | - | chr3_2:78716204-78716223 | None:intergenic | 35.0% | |
| ATGTCTTGTAGTATCAGTTG+TGG | + | chr3_2:78716281-78716300 | Msa0427980:CDS | 35.0% | |
| TGAGGATGTAAAAAGCAACT+TGG | + | chr3_2:78716401-78716420 | Msa0427980:three_prime_UTR | 35.0% | |
| GAGGATGTAAAAAGCAACTT+GGG | + | chr3_2:78716402-78716421 | Msa0427980:three_prime_UTR | 35.0% | |
| AATTGAAGGTCTTGCTTTCT+TGG | + | chr3_2:78716559-78716578 | Msa0427980:intron | 35.0% | |
| ATTGAAGGTCTTGCTTTCTT+GGG | + | chr3_2:78716560-78716579 | Msa0427980:intron | 35.0% | |
| !!! | TTTTTTGATGAAGCAAGGAG+GGG | + | chr3_2:78716686-78716705 | Msa0427980:three_prime_UTR | 35.0% |
| ATTGGACGGTCCATTAGTAT+GGG | - | chr3_2:78712866-78712885 | None:intergenic | 40.0% | |
| AATTGGACGGTCCATTAGTA+TGG | - | chr3_2:78712867-78712886 | None:intergenic | 40.0% | |
| !!! | CTTTTTCGGTACGAATTGGA+CGG | - | chr3_2:78712880-78712899 | None:intergenic | 40.0% |
| CAGCACCAAAGAAACAAAAG+AGG | - | chr3_2:78713104-78713123 | None:intergenic | 40.0% | |
| GTGAAATGCAGTCCAATTGA+CGG | + | chr3_2:78713160-78713179 | Msa0427980:five_prime_UTR | 40.0% | |
| ! | TCTAGAATTTGACATGGAGG+TGG | + | chr3_2:78713309-78713328 | Msa0427980:exon | 40.0% |
| !!! | GGTACTTTTTGAGACAGGAA+CGG | + | chr3_2:78713569-78713588 | Msa0427980:intron | 40.0% |
| !!! | TTTTTGAGACAGGAACGGTT+TGG | + | chr3_2:78713574-78713593 | Msa0427980:intron | 40.0% |
| ATAACAGCAGTTGTAGGATC+AGG | + | chr3_2:78713615-78713634 | Msa0427980:CDS | 40.0% | |
| TCACACGCTTGTACTTGATT+TGG | + | chr3_2:78714104-78714123 | Msa0427980:intron | 40.0% | |
| GTTTCAATGACACCCTTTGT+GGG | + | chr3_2:78714254-78714273 | Msa0427980:CDS | 40.0% | |
| GTACTGAACTATCCCACAAA+GGG | - | chr3_2:78714269-78714288 | None:intergenic | 40.0% | |
| TGTACTGAACTATCCCACAA+AGG | - | chr3_2:78714270-78714289 | None:intergenic | 40.0% | |
| GCAATAGGATACACAATTGC+GGG | + | chr3_2:78714307-78714326 | Msa0427980:CDS | 40.0% | |
| GATCACTCACATCATGCTAA+TGG | - | chr3_2:78714335-78714354 | None:intergenic | 40.0% | |
| ! | ACCTATTCCTTTATTGGCCT+TGG | + | chr3_2:78715161-78715180 | Msa0427980:CDS | 40.0% |
| ACCAAGGCCAATAAAGGAAT+AGG | - | chr3_2:78715165-78715184 | None:intergenic | 40.0% | |
| GACAGAAAATGGTTCCTTCA+AGG | + | chr3_2:78715298-78715317 | Msa0427980:intron | 40.0% | |
| TTCCAATGCTTACTCCTGTA+AGG | - | chr3_2:78715328-78715347 | None:intergenic | 40.0% | |
| ! | GGAAAGTTCCCCATACTTTT+TGG | - | chr3_2:78715364-78715383 | None:intergenic | 40.0% |
| CAATAGTGTTTGGGCTTAAG+TGG | - | chr3_2:78715506-78715525 | None:intergenic | 40.0% | |
| !!! | GGATTTTTTATGGTGTCCTG+TGG | - | chr3_2:78715733-78715752 | None:intergenic | 40.0% |
| TTATATGCTTTGTGGCTGCA+TGG | + | chr3_2:78715816-78715835 | Msa0427980:CDS | 40.0% | |
| TATATGCTTTGTGGCTGCAT+GGG | + | chr3_2:78715817-78715836 | Msa0427980:CDS | 40.0% | |
| CACAAGGTGAATTACGATAG+CGG | - | chr3_2:78715926-78715945 | None:intergenic | 40.0% | |
| GCTATCGTAATTCACCTTGT+GGG | + | chr3_2:78715925-78715944 | Msa0427980:CDS | 40.0% | |
| TTCTCGACGAAAGCAAAGAA+GGG | - | chr3_2:78715973-78715992 | None:intergenic | 40.0% | |
| TTTCTCGACGAAAGCAAAGA+AGG | - | chr3_2:78715974-78715993 | None:intergenic | 40.0% | |
| GAATACCGAATTCCAATTCC+TGG | + | chr3_2:78716027-78716046 | Msa0427980:CDS | 40.0% | |
| TAGGGTTGAAAACCAGGAAT+TGG | - | chr3_2:78716042-78716061 | None:intergenic | 40.0% | |
| AGATTGTAGGGTTGAAAACC+AGG | - | chr3_2:78716048-78716067 | None:intergenic | 40.0% | |
| TATCAGTTGTGGCTGTTGTT+GGG | + | chr3_2:78716292-78716311 | Msa0427980:CDS | 40.0% | |
| AACTTGGGTAGTGACTTATG+TGG | + | chr3_2:78716417-78716436 | Msa0427980:three_prime_UTR | 40.0% | |
| TTGGACGGTCCATTAGTATG+GGG | - | chr3_2:78712865-78712884 | None:intergenic | 45.0% | |
| GATGACCGTCTCAAAAGAAC+AGG | + | chr3_2:78713388-78713407 | Msa0427980:CDS | 45.0% | |
| !! | AGGAGTGTTGTCGTTAGCAT+GGG | + | chr3_2:78713635-78713654 | Msa0427980:CDS | 45.0% |
| CGAATTGGCGATCCTCATTA+CGG | + | chr3_2:78713753-78713772 | Msa0427980:CDS | 45.0% | |
| GAAGCTGTTCACACCATTCT+GGG | + | chr3_2:78713798-78713817 | Msa0427980:CDS | 45.0% | |
| GGTTTCAATGACACCCTTTG+TGG | + | chr3_2:78714253-78714272 | Msa0427980:CDS | 45.0% | |
| !!! | AAACTGGTTTTGGCTGAGAC+AGG | + | chr3_2:78714970-78714989 | Msa0427980:intron | 45.0% |
| !!! | AACTGGTTTTGGCTGAGACA+GGG | + | chr3_2:78714971-78714990 | Msa0427980:intron | 45.0% |
| GCTGAGACAGGGCAATAAAA+AGG | + | chr3_2:78714982-78715001 | Msa0427980:intron | 45.0% | |
| TCTGACTGTTTGCATTCCTC+AGG | + | chr3_2:78715005-78715024 | Msa0427980:CDS | 45.0% | |
| ! | ACATGAGTCTTTTCCTCCTG+AGG | - | chr3_2:78715024-78715043 | None:intergenic | 45.0% |
| TGCTAGACCAAGGCCAATAA+AGG | - | chr3_2:78715171-78715190 | None:intergenic | 45.0% | |
| AGCCTTACAGGAGTAAGCAT+TGG | + | chr3_2:78715323-78715342 | Msa0427980:CDS | 45.0% | |
| GTTTGGGCTTAAGTGGGTAT+TGG | - | chr3_2:78715499-78715518 | None:intergenic | 45.0% | |
| ! | TGCATGGGTTATGCAGCATT+TGG | + | chr3_2:78715832-78715851 | Msa0427980:CDS | 45.0% |
| ATTCCAGTGAGTAAGTTCCC+TGG | - | chr3_2:78715868-78715887 | None:intergenic | 45.0% | |
| CGCTATCGTAATTCACCTTG+TGG | + | chr3_2:78715924-78715943 | Msa0427980:CDS | 45.0% | |
| ATACTTGGTATGCTCCCACA+AGG | - | chr3_2:78715942-78715961 | None:intergenic | 45.0% | |
| TTGGGATTACTTGGAGCAGT+AGG | + | chr3_2:78716153-78716172 | Msa0427980:CDS | 45.0% | |
| TGGGATTACTTGGAGCAGTA+GGG | + | chr3_2:78716154-78716173 | Msa0427980:CDS | 45.0% | |
| ! | TACTTGGAGCAGTAGGGTTT+TGG | + | chr3_2:78716160-78716179 | Msa0427980:CDS | 45.0% |
| GTATCAGTTGTGGCTGTTGT+TGG | + | chr3_2:78716291-78716310 | Msa0427980:CDS | 45.0% | |
| !! | AATAATATTATAATAAGAAT+TGG | - | chr3_2:78712991-78713010 | None:intergenic | 5.0% |
| !!! | TTATTTATTGATTTAATAAA+GGG | - | chr3_2:78714807-78714826 | None:intergenic | 5.0% |
| !!! | TTTATTTATTGATTTAATAA+AGG | - | chr3_2:78714808-78714827 | None:intergenic | 5.0% |
| ! | GTTTGGTAGGTGCCGTCAAT+TGG | - | chr3_2:78713175-78713194 | None:intergenic | 50.0% |
| TTGACGGCACCTACCAAACA+AGG | + | chr3_2:78713176-78713195 | Msa0427980:five_prime_UTR | 50.0% | |
| !! | CAGGAGTGTTGTCGTTAGCA+TGG | + | chr3_2:78713634-78713653 | Msa0427980:CDS | 50.0% |
| AGCATGGGCAATAGCTCAGT+TGG | + | chr3_2:78713650-78713669 | Msa0427980:CDS | 50.0% | |
| GCATGGGCAATAGCTCAGTT+GGG | + | chr3_2:78713651-78713670 | Msa0427980:CDS | 50.0% | |
| GGCAATAGCTCAGTTGGGTT+GGG | + | chr3_2:78713656-78713675 | Msa0427980:CDS | 50.0% | |
| GGAAGCTGTTCACACCATTC+TGG | + | chr3_2:78713797-78713816 | Msa0427980:CDS | 50.0% | |
| GACTGTTTGCATTCCTCAGG+AGG | + | chr3_2:78715008-78715027 | Msa0427980:CDS | 50.0% | |
| CTTTGGCAACTGCTAGACCA+AGG | - | chr3_2:78715181-78715200 | None:intergenic | 50.0% | |
| CTAGCAGTTGCCAAAGTTGC+AGG | + | chr3_2:78715185-78715204 | Msa0427980:CDS | 50.0% | |
| ! | TCCTTCAAGGGTAGCCTTAC+AGG | + | chr3_2:78715311-78715330 | Msa0427980:CDS | 50.0% |
| TCCTGTAAGGCTACCCTTGA+AGG | - | chr3_2:78715315-78715334 | None:intergenic | 50.0% | |
| TGGGGAACTTTCCAAGCTCT+TGG | + | chr3_2:78715371-78715390 | Msa0427980:CDS | 50.0% | |
| AGGCTATGTTGCCAAGAGCT+TGG | - | chr3_2:78715385-78715404 | None:intergenic | 50.0% | |
| CATTTGGAGACACAGCACCA+GGG | + | chr3_2:78715848-78715867 | Msa0427980:CDS | 50.0% | |
| AGAAGGGTTGCGCGTATACT+TGG | - | chr3_2:78715957-78715976 | None:intergenic | 50.0% | |
| GAAGGTCTTGCTTTCTTGGG+AGG | + | chr3_2:78716563-78716582 | Msa0427980:intron | 50.0% | |
| CTTGCTTTCTTGGGAGGAAG+TGG | + | chr3_2:78716569-78716588 | Msa0427980:intron | 50.0% | |
| GAGGAAGTGGATGTGAGCAT+AGG | + | chr3_2:78716582-78716601 | Msa0427980:intron | 50.0% | |
| GGGCAATAGCTCAGTTGGGT+TGG | + | chr3_2:78713655-78713674 | Msa0427980:CDS | 55.0% | |
| !! | GCTCAGTTGGGTTGGGTGAT+TGG | + | chr3_2:78713663-78713682 | Msa0427980:CDS | 55.0% |
| GCATTTGGAGACACAGCACC+AGG | + | chr3_2:78715847-78715866 | Msa0427980:CDS | 55.0% | |
| GCACCAGGGAACTTACTCAC+TGG | + | chr3_2:78715862-78715881 | Msa0427980:CDS | 55.0% | |
| TGTGGCTGTTGTTGGGTCAG+TGG | + | chr3_2:78716299-78716318 | Msa0427980:CDS | 55.0% | |
| TGATGAAGCAAGGAGGGGAG+CGG | + | chr3_2:78716691-78716710 | Msa0427980:three_prime_UTR | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 78712122 | 78716727 | 78712122 | ID=Msa0427980;Name=Msa0427980 |
| chr3_2 | mRNA | 78712122 | 78716727 | 78712122 | ID=Msa0427980-mRNA-1;Parent=Msa0427980;Name=Msa0427980-mRNA-1;_AED=0.32;_eAED=0.32;_QI=142|1|1|1|0.62|0.44|9|230|469 |
| chr3_2 | exon | 78712122 | 78712171 | 78712122 | ID=Msa0427980-mRNA-1:exon:20955;Parent=Msa0427980-mRNA-1 |
| chr3_2 | exon | 78713136 | 78713197 | 78713136 | ID=Msa0427980-mRNA-1:exon:20956;Parent=Msa0427980-mRNA-1 |
| chr3_2 | exon | 78713292 | 78713409 | 78713292 | ID=Msa0427980-mRNA-1:exon:20957;Parent=Msa0427980-mRNA-1 |
| chr3_2 | exon | 78713586 | 78713819 | 78713586 | ID=Msa0427980-mRNA-1:exon:20958;Parent=Msa0427980-mRNA-1 |
| chr3_2 | exon | 78714251 | 78714344 | 78714251 | ID=Msa0427980-mRNA-1:exon:20959;Parent=Msa0427980-mRNA-1 |
| chr3_2 | exon | 78714992 | 78715206 | 78714992 | ID=Msa0427980-mRNA-1:exon:20960;Parent=Msa0427980-mRNA-1 |
| chr3_2 | exon | 78715303 | 78715442 | 78715303 | ID=Msa0427980-mRNA-1:exon:20961;Parent=Msa0427980-mRNA-1 |
| chr3_2 | exon | 78715736 | 78716514 | 78715736 | ID=Msa0427980-mRNA-1:exon:20962;Parent=Msa0427980-mRNA-1 |
| chr3_2 | exon | 78716638 | 78716727 | 78716638 | ID=Msa0427980-mRNA-1:exon:20963;Parent=Msa0427980-mRNA-1 |
| chr3_2 | five_prime_UTR | 78712122 | 78712171 | 78712122 | ID=Msa0427980-mRNA-1:five_prime_utr;Parent=Msa0427980-mRNA-1 |
| chr3_2 | five_prime_UTR | 78713136 | 78713197 | 78713136 | ID=Msa0427980-mRNA-1:five_prime_utr;Parent=Msa0427980-mRNA-1 |
| chr3_2 | five_prime_UTR | 78713292 | 78713321 | 78713292 | ID=Msa0427980-mRNA-1:five_prime_utr;Parent=Msa0427980-mRNA-1 |
| chr3_2 | CDS | 78713322 | 78713409 | 78713322 | ID=Msa0427980-mRNA-1:cds;Parent=Msa0427980-mRNA-1 |
| chr3_2 | CDS | 78713586 | 78713819 | 78713586 | ID=Msa0427980-mRNA-1:cds;Parent=Msa0427980-mRNA-1 |
| chr3_2 | CDS | 78714251 | 78714344 | 78714251 | ID=Msa0427980-mRNA-1:cds;Parent=Msa0427980-mRNA-1 |
| chr3_2 | CDS | 78714992 | 78715206 | 78714992 | ID=Msa0427980-mRNA-1:cds;Parent=Msa0427980-mRNA-1 |
| chr3_2 | CDS | 78715303 | 78715442 | 78715303 | ID=Msa0427980-mRNA-1:cds;Parent=Msa0427980-mRNA-1 |
| chr3_2 | CDS | 78715736 | 78716374 | 78715736 | ID=Msa0427980-mRNA-1:cds;Parent=Msa0427980-mRNA-1 |
| chr3_2 | three_prime_UTR | 78716375 | 78716514 | 78716375 | ID=Msa0427980-mRNA-1:three_prime_utr;Parent=Msa0427980-mRNA-1 |
| chr3_2 | three_prime_UTR | 78716638 | 78716727 | 78716638 | ID=Msa0427980-mRNA-1:three_prime_utr;Parent=Msa0427980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
