Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378380 | XP_039687650.1 | 99.142 | 466 | 3 | 1 | 1 | 466 | 1 | 465 | 0.0 | 941 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378380 | sp|Q38967|AAP2_ARATH | 69.462 | 465 | 136 | 3 | 11 | 469 | 29 | 493 | 0.0 | 694 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378380 | G8A1P0 | 99.142 | 466 | 3 | 1 | 1 | 466 | 1 | 465 | 0.0 | 941 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027390 | Msa0378380 | 0.804435 | 2.163599e-49 | -8.615850e-47 |
| Msa0032320 | Msa0378380 | 0.819620 | 1.055498e-52 | -8.615850e-47 |
| Msa0043730 | Msa0378380 | 0.802873 | 4.562830e-49 | -8.615850e-47 |
| Msa0076670 | Msa0378380 | 0.817650 | 2.954701e-52 | -8.615850e-47 |
| Msa0078610 | Msa0378380 | 0.853188 | 2.818870e-61 | -8.615850e-47 |
| Msa0090390 | Msa0378380 | 0.819276 | 1.264774e-52 | -8.615850e-47 |
| Msa0100080 | Msa0378380 | 0.802857 | 4.596835e-49 | -8.615850e-47 |
| Msa0101880 | Msa0378380 | 0.816855 | 4.459580e-52 | -8.615850e-47 |
| Msa0124550 | Msa0378380 | 0.815520 | 8.864917e-52 | -8.615850e-47 |
| Msa0137870 | Msa0378380 | 0.813486 | 2.498314e-51 | -8.615850e-47 |
| Msa0165300 | Msa0378380 | 0.811085 | 8.352562e-51 | -8.615850e-47 |
| Msa0177700 | Msa0378380 | -0.806627 | 7.504968e-50 | -8.615850e-47 |
| Msa0178510 | Msa0378380 | 0.808248 | 3.400064e-50 | -8.615850e-47 |
| Msa0197660 | Msa0378380 | 0.828826 | 7.244313e-55 | -8.615850e-47 |
| Msa0213040 | Msa0378380 | 0.800151 | 1.648740e-48 | -8.615850e-47 |
| Msa0220080 | Msa0378380 | 0.806352 | 8.576620e-50 | -8.615850e-47 |
| Msa0220490 | Msa0378380 | 0.814739 | 1.321492e-51 | -8.615850e-47 |
| Msa0377530 | Msa0378380 | 0.825323 | 4.989365e-54 | -8.615850e-47 |
| Msa0378380 | Msa0388030 | -0.862804 | 3.908233e-64 | -8.615850e-47 |
| Msa0378380 | Msa0410300 | 0.818854 | 1.577285e-52 | -8.615850e-47 |
| Msa0378380 | Msa0422500 | 0.831939 | 1.256177e-55 | -8.615850e-47 |
| Msa0378380 | Msa0427730 | 0.934729 | 2.572212e-96 | -8.615850e-47 |
| Msa0378380 | Msa0427980 | 0.958841 | 8.656888e-117 | -8.615850e-47 |
| Msa0378380 | Msa0428050 | 0.821284 | 4.381041e-53 | -8.615850e-47 |
| Msa0378380 | Msa0437150 | 0.832007 | 1.208086e-55 | -8.615850e-47 |
| Msa0378380 | Msa0445280 | 0.822498 | 2.293685e-53 | -8.615850e-47 |
| Msa0378380 | Msa0450350 | 0.828901 | 6.947744e-55 | -8.615850e-47 |
| Msa0378380 | Msa0461590 | 0.815762 | 7.830013e-52 | -8.615850e-47 |
| Msa0378380 | Msa0464900 | 0.824204 | 9.159323e-54 | -8.615850e-47 |
| Msa0378380 | Msa0468320 | 0.801901 | 7.234221e-49 | -8.615850e-47 |
| Msa0378380 | Msa0473240 | 0.809407 | 1.920946e-50 | -8.615850e-47 |
| Msa0378380 | Msa0474390 | 0.812423 | 4.272014e-51 | -8.615850e-47 |
| Msa0378380 | Msa0505060 | 0.803739 | 3.018747e-49 | -8.615850e-47 |
| Msa0378380 | Msa0511250 | 0.823244 | 1.537382e-53 | -8.615850e-47 |
| Msa0378380 | Msa0512870 | 0.808341 | 3.248475e-50 | -8.615850e-47 |
| Msa0378380 | Msa0517090 | 0.837110 | 6.306209e-57 | -8.615850e-47 |
| Msa0378380 | Msa0517490 | 0.835728 | 1.416767e-56 | -8.615850e-47 |
| Msa0378380 | Msa0518560 | 0.984016 | 2.376865e-159 | -8.615850e-47 |
| Msa0378380 | Msa0518810 | 0.812652 | 3.805956e-51 | -8.615850e-47 |
| Msa0378380 | Msa0527980 | -0.805077 | 1.588708e-49 | -8.615850e-47 |
| Msa0378380 | Msa0532540 | 0.802922 | 4.457450e-49 | -8.615850e-47 |
| Msa0378380 | Msa0537770 | 0.806612 | 7.558211e-50 | -8.615850e-47 |
| Msa0378380 | Msa0541040 | 0.844676 | 6.521822e-59 | -8.615850e-47 |
| Msa0378380 | Msa0587190 | 0.817467 | 3.249067e-52 | -8.615850e-47 |
| Msa0378380 | Msa0589390 | 0.814444 | 1.536214e-51 | -8.615850e-47 |
| Msa0378380 | Msa0592180 | 0.818039 | 2.412961e-52 | -8.615850e-47 |
| Msa0378380 | Msa0597000 | 0.834033 | 3.786987e-56 | -8.615850e-47 |
| Msa0378380 | Msa0615220 | 0.812102 | 5.020091e-51 | -8.615850e-47 |
| Msa0378380 | Msa0620620 | 0.800351 | 1.501302e-48 | -8.615850e-47 |
| Msa0378380 | Msa0626220 | 0.845373 | 4.227874e-59 | -8.615850e-47 |
| Msa0378380 | Msa0626280 | 0.809133 | 2.199570e-50 | -8.615850e-47 |
| Msa0378380 | Msa0626990 | 0.804507 | 2.090124e-49 | -8.615850e-47 |
| Msa0378380 | Msa0629630 | 0.816067 | 6.693809e-52 | -8.615850e-47 |
| Msa0378380 | Msa0637900 | 0.800341 | 1.507965e-48 | -8.615850e-47 |
| Msa0378380 | Msa0677080 | 0.818223 | 2.192372e-52 | -8.615850e-47 |
| Msa0378380 | Msa0679550 | 0.809351 | 1.975723e-50 | -8.615850e-47 |
| Msa0378380 | Msa0686080 | 0.805088 | 1.580057e-49 | -8.615850e-47 |
| Msa0378380 | Msa0693310 | 0.801220 | 9.980152e-49 | -8.615850e-47 |
| Msa0378380 | Msa0715410 | 0.831314 | 1.791079e-55 | -8.615850e-47 |
| Msa0378380 | Msa0735160 | 0.818972 | 1.482486e-52 | -8.615850e-47 |
| Msa0378380 | Msa0756530 | 0.812304 | 4.535262e-51 | -8.615850e-47 |
| Msa0378380 | Msa0779090 | 0.820726 | 5.890342e-53 | -8.615850e-47 |
| Msa0378380 | Msa0793140 | -0.809222 | 2.105281e-50 | -8.615850e-47 |
| Msa0378380 | Msa0794140 | 0.807974 | 3.889235e-50 | -8.615850e-47 |
| Msa0378380 | Msa0799060 | 0.830218 | 3.323157e-55 | -8.615850e-47 |
| Msa0378380 | Msa0816510 | 0.818944 | 1.504938e-52 | -8.615850e-47 |
| Msa0378380 | Msa0816540 | 0.821874 | 3.200519e-53 | -8.615850e-47 |
| Msa0378380 | Msa0818160 | 0.806322 | 8.702322e-50 | -8.615850e-47 |
| Msa0378380 | Msa0826760 | 0.801590 | 8.379889e-49 | -8.615850e-47 |
| Msa0378380 | Msa0844390 | 0.812058 | 5.130263e-51 | -8.615850e-47 |
| Msa0378380 | Msa0856710 | 0.831332 | 1.772842e-55 | -8.615850e-47 |
| Msa0378380 | Msa0922030 | 0.824496 | 7.820050e-54 | -8.615850e-47 |
| Msa0378380 | Msa0930400 | -0.811437 | 7.003402e-51 | -8.615850e-47 |
| Msa0378380 | Msa0945120 | 0.816147 | 6.422699e-52 | -8.615850e-47 |
| Msa0378380 | Msa0960740 | 0.808146 | 3.573808e-50 | -8.615850e-47 |
| Msa0378380 | Msa1021510 | 0.853080 | 3.026317e-61 | -8.615850e-47 |
| Msa0378380 | Msa1028270 | 0.807097 | 5.970883e-50 | -8.615850e-47 |
| Msa0378380 | Msa1078410 | 0.810268 | 1.254357e-50 | -8.615850e-47 |
| Msa0378380 | Msa1105500 | 0.850466 | 1.667481e-60 | -8.615850e-47 |
| Msa0378380 | Msa1152950 | 0.806896 | 6.582718e-50 | -8.615850e-47 |
| Msa0378380 | Msa1176270 | 0.812727 | 3.665889e-51 | -8.615850e-47 |
| Msa0378380 | Msa1219810 | 0.804298 | 2.310194e-49 | -8.615850e-47 |
| Msa0378380 | Msa1229850 | 0.802537 | 5.351814e-49 | -8.615850e-47 |
| Msa0378380 | Msa1253450 | 0.801835 | 7.465687e-49 | -8.615850e-47 |
| Msa0378380 | Msa1267060 | 0.807741 | 4.359214e-50 | -8.615850e-47 |
| Msa0378380 | Msa1307550 | 0.823001 | 1.752055e-53 | -8.615850e-47 |
| Msa0378380 | Msa1314770 | 0.805838 | 1.100377e-49 | -8.615850e-47 |
| Msa0378380 | Msa1329670 | 0.813268 | 2.789527e-51 | -8.615850e-47 |
| Msa0378380 | Msa1333680 | 0.805547 | 1.266562e-49 | -8.615850e-47 |
| Msa0378380 | Msa1335710 | 0.808164 | 3.543035e-50 | -8.615850e-47 |
| Msa0378380 | Msa1338250 | 0.824474 | 7.916063e-54 | -8.615850e-47 |
| Msa0378380 | Msa1340810 | 0.802833 | 4.651131e-49 | -8.615850e-47 |
| Msa0378380 | Msa1351090 | 0.822848 | 1.901478e-53 | -8.615850e-47 |
| Msa0378380 | Msa1372150 | 0.803574 | 3.267265e-49 | -8.615850e-47 |
| Msa0378380 | Msa1377570 | 0.806963 | 6.372187e-50 | -8.615850e-47 |
| Msa0378380 | Msa1401140 | 0.803296 | 3.729971e-49 | -8.615850e-47 |
| Msa0378380 | Msa1422840 | 0.800694 | 1.278118e-48 | -8.615850e-47 |
| Msa0378380 | Msa1424780 | 0.801533 | 8.607377e-49 | -8.615850e-47 |
| Msa0378380 | Msa1435400 | 0.849164 | 3.853504e-60 | -8.615850e-47 |
| Msa0378380 | Msa1440940 | 0.824084 | 9.778139e-54 | -8.615850e-47 |
| Msa0378380 | Msa1443610 | 0.815508 | 8.917849e-52 | -8.615850e-47 |
| Msa0378380 | Msa1448770 | 0.839350 | 1.670123e-57 | -8.615850e-47 |
| Msa0239800 | Msa0378380 | 0.833344 | 5.627425e-56 | -8.615850e-47 |
| Msa0268090 | Msa0378380 | 0.819987 | 8.700775e-53 | -8.615850e-47 |
| Msa0277820 | Msa0378380 | 0.802431 | 5.628146e-49 | -8.615850e-47 |
| Msa0288730 | Msa0378380 | 0.809886 | 1.515734e-50 | -8.615850e-47 |
| Msa0289400 | Msa0378380 | 0.810267 | 1.255105e-50 | -8.615850e-47 |
| Msa0292170 | Msa0378380 | 0.800192 | 1.617657e-48 | -8.615850e-47 |
| Msa0299730 | Msa0378380 | 0.800188 | 1.620547e-48 | -8.615850e-47 |
| Msa0313740 | Msa0378380 | 0.803597 | 3.230546e-49 | -8.615850e-47 |
| Msa0314120 | Msa0378380 | 0.833674 | 4.655188e-56 | -8.615850e-47 |
| Msa0317510 | Msa0378380 | 0.832315 | 1.013792e-55 | -8.615850e-47 |
| Msa0335040 | Msa0378380 | 0.803912 | 2.779404e-49 | -8.615850e-47 |
| Msa0340690 | Msa0378380 | 0.843477 | 1.367843e-58 | -8.615850e-47 |
| Msa0340710 | Msa0378380 | 0.837043 | 6.559060e-57 | -8.615850e-47 |
| Msa0344870 | Msa0378380 | 0.810838 | 9.446732e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378380 | MtrunA17_Chr3g0130651 | 99.142 | 466 | 3 | 1 | 1 | 466 | 1 | 465 | 0.0 | 941 |
| Msa0378380 | MtrunA17_Chr3g0130641 | 71.581 | 468 | 130 | 2 | 4 | 469 | 11 | 477 | 0.0 | 701 |
| Msa0378380 | MtrunA17_Chr8g0384661 | 70.753 | 465 | 128 | 2 | 7 | 469 | 36 | 494 | 0.0 | 696 |
| Msa0378380 | MtrunA17_Chr3g0125081 | 67.516 | 471 | 146 | 3 | 4 | 469 | 11 | 479 | 0.0 | 676 |
| Msa0378380 | MtrunA17_Chr3g0125091 | 68.008 | 472 | 143 | 4 | 4 | 469 | 11 | 480 | 0.0 | 676 |
| Msa0378380 | MtrunA17_Chr3g0125101 | 66.737 | 472 | 149 | 4 | 4 | 469 | 11 | 480 | 0.0 | 660 |
| Msa0378380 | MtrunA17_Chr4g0037201 | 63.674 | 479 | 163 | 3 | 2 | 469 | 34 | 512 | 0.0 | 646 |
| Msa0378380 | MtrunA17_Chr1g0159761 | 66.737 | 472 | 146 | 4 | 4 | 469 | 9 | 475 | 0.0 | 643 |
| Msa0378380 | MtrunA17_Chr3g0140761 | 56.652 | 466 | 195 | 4 | 7 | 465 | 13 | 478 | 0.0 | 544 |
| Msa0378380 | MtrunA17_Chr1g0146491 | 56.290 | 469 | 198 | 4 | 7 | 468 | 3 | 471 | 0.0 | 543 |
| Msa0378380 | MtrunA17_Chr1g0206871 | 54.585 | 458 | 192 | 5 | 26 | 468 | 14 | 470 | 3.77e-178 | 507 |
| Msa0378380 | MtrunA17_Chr1g0206821 | 49.903 | 517 | 192 | 7 | 16 | 465 | 11 | 527 | 3.09e-173 | 497 |
| Msa0378380 | MtrunA17_Chr3g0103231 | 51.121 | 446 | 211 | 3 | 15 | 455 | 11 | 454 | 8.38e-166 | 475 |
| Msa0378380 | MtrunA17_Chr1g0146411 | 49.680 | 469 | 223 | 6 | 2 | 465 | 9 | 469 | 4.26e-165 | 474 |
| Msa0378380 | MtrunA17_Chr3g0140531 | 49.894 | 471 | 226 | 5 | 1 | 465 | 1 | 467 | 5.10e-161 | 464 |
| Msa0378380 | MtrunA17_Chr1g0146331 | 49.336 | 452 | 219 | 5 | 21 | 465 | 14 | 462 | 2.04e-159 | 459 |
| Msa0378380 | MtrunA17_Chr2g0293331 | 49.778 | 450 | 221 | 3 | 20 | 465 | 5 | 453 | 1.76e-158 | 456 |
| Msa0378380 | MtrunA17_Chr3g0103221 | 49.775 | 444 | 216 | 3 | 25 | 463 | 28 | 469 | 1.63e-157 | 454 |
| Msa0378380 | MtrunA17_Chr5g0447221 | 50.000 | 438 | 210 | 5 | 24 | 455 | 26 | 460 | 2.32e-157 | 454 |
| Msa0378380 | MtrunA17_Chr3g0103211 | 50.113 | 441 | 213 | 3 | 20 | 455 | 16 | 454 | 2.81e-157 | 454 |
| Msa0378380 | MtrunA17_Chr1g0146391 | 48.667 | 450 | 226 | 3 | 21 | 466 | 6 | 454 | 2.41e-155 | 449 |
| Msa0378380 | MtrunA17_Chr3g0103271 | 49.660 | 441 | 214 | 4 | 21 | 455 | 21 | 459 | 7.77e-151 | 437 |
| Msa0378380 | MtrunA17_Chr3g0140541 | 47.872 | 470 | 232 | 5 | 1 | 465 | 5 | 466 | 7.31e-148 | 430 |
| Msa0378380 | MtrunA17_Chr1g0206851 | 51.630 | 368 | 165 | 5 | 108 | 468 | 19 | 380 | 1.12e-132 | 388 |
| Msa0378380 | MtrunA17_Chr5g0447231 | 44.266 | 436 | 235 | 4 | 26 | 455 | 24 | 457 | 6.18e-132 | 389 |
| Msa0378380 | MtrunA17_Chr5g0402151 | 64.068 | 295 | 71 | 4 | 30 | 322 | 3 | 264 | 6.10e-123 | 359 |
| Msa0378380 | MtrunA17_Chr1g0206831 | 54.573 | 328 | 136 | 5 | 140 | 460 | 14 | 335 | 6.28e-119 | 352 |
| Msa0378380 | MtrunA17_Chr3g0130671 | 70.306 | 229 | 68 | 0 | 7 | 235 | 19 | 247 | 3.25e-115 | 340 |
| Msa0378380 | MtrunA17_Chr3g0103251 | 48.857 | 350 | 143 | 4 | 140 | 455 | 20 | 367 | 2.25e-114 | 341 |
| Msa0378380 | MtrunA17_Chr3g0130661 | 66.854 | 178 | 57 | 1 | 291 | 466 | 1 | 178 | 9.49e-84 | 256 |
| Msa0378380 | MtrunA17_Chr6g0458931 | 29.185 | 466 | 286 | 11 | 12 | 463 | 17 | 452 | 1.28e-50 | 178 |
| Msa0378380 | MtrunA17_Chr2g0331721 | 28.728 | 456 | 280 | 10 | 23 | 466 | 39 | 461 | 8.88e-46 | 165 |
| Msa0378380 | MtrunA17_Chr8g0376991 | 28.319 | 452 | 286 | 10 | 23 | 466 | 15 | 436 | 1.31e-45 | 164 |
| Msa0378380 | MtrunA17_Chr4g0057851 | 28.959 | 442 | 276 | 10 | 28 | 463 | 11 | 420 | 3.49e-45 | 163 |
| Msa0378380 | MtrunA17_Chr1g0184721 | 27.468 | 466 | 298 | 12 | 10 | 465 | 2 | 437 | 1.43e-43 | 159 |
| Msa0378380 | MtrunA17_Chr3g0077651 | 28.409 | 440 | 285 | 7 | 28 | 463 | 53 | 466 | 5.09e-43 | 158 |
| Msa0378380 | MtrunA17_Chr7g0230011 | 29.677 | 465 | 269 | 12 | 21 | 462 | 10 | 439 | 3.16e-41 | 152 |
| Msa0378380 | MtrunA17_Chr6g0459021 | 29.175 | 473 | 294 | 12 | 1 | 463 | 3 | 444 | 4.85e-40 | 149 |
| Msa0378380 | MtrunA17_Chr5g0422741 | 29.299 | 471 | 289 | 13 | 6 | 466 | 3 | 439 | 3.02e-39 | 147 |
| Msa0378380 | MtrunA17_Chr3g0122921 | 27.696 | 473 | 279 | 13 | 4 | 466 | 9 | 428 | 3.77e-39 | 146 |
| Msa0378380 | MtrunA17_Chr6g0458921 | 29.252 | 441 | 277 | 9 | 28 | 463 | 15 | 425 | 6.07e-39 | 146 |
| Msa0378380 | MtrunA17_Chr6g0459011 | 29.953 | 424 | 259 | 10 | 43 | 460 | 1 | 392 | 2.49e-38 | 143 |
| Msa0378380 | MtrunA17_Chr6g0459031 | 28.540 | 452 | 284 | 10 | 21 | 463 | 4 | 425 | 3.80e-38 | 144 |
| Msa0378380 | MtrunA17_Chr2g0328081 | 29.204 | 452 | 281 | 10 | 21 | 463 | 4 | 425 | 3.85e-36 | 138 |
| Msa0378380 | MtrunA17_Chr1g0198531 | 27.447 | 470 | 290 | 14 | 10 | 466 | 6 | 437 | 4.10e-35 | 135 |
| Msa0378380 | MtrunA17_Chr6g0459001 | 27.992 | 493 | 297 | 10 | 2 | 463 | 8 | 473 | 1.75e-34 | 134 |
| Msa0378380 | MtrunA17_Chr1g0206841 | 64.516 | 93 | 33 | 0 | 16 | 108 | 10 | 102 | 6.67e-34 | 123 |
| Msa0378380 | MtrunA17_Chr4g0027241 | 27.716 | 451 | 289 | 14 | 26 | 467 | 39 | 461 | 8.01e-34 | 132 |
| Msa0378380 | MtrunA17_Chr1g0198541 | 25.738 | 474 | 299 | 12 | 7 | 466 | 3 | 437 | 2.72e-32 | 127 |
| Msa0378380 | MtrunA17_Chr3g0103261 | 45.255 | 137 | 74 | 1 | 15 | 151 | 11 | 146 | 2.86e-32 | 120 |
| Msa0378380 | MtrunA17_Chr8g0387941 | 25.210 | 476 | 312 | 14 | 10 | 468 | 2 | 450 | 1.35e-31 | 126 |
| Msa0378380 | MtrunA17_Chr1g0146351 | 58.000 | 100 | 41 | 1 | 37 | 136 | 13 | 111 | 5.17e-31 | 115 |
| Msa0378380 | MtrunA17_Chr1g0206861 | 46.875 | 128 | 65 | 2 | 6 | 132 | 2 | 127 | 4.37e-30 | 114 |
| Msa0378380 | MtrunA17_Chr1g0198081 | 26.862 | 443 | 277 | 17 | 38 | 466 | 70 | 479 | 2.63e-27 | 114 |
| Msa0378380 | MtrunA17_Chr4g0038711 | 24.580 | 476 | 303 | 14 | 16 | 464 | 55 | 501 | 4.17e-25 | 107 |
| Msa0378380 | MtrunA17_Chr3g0143701 | 25.107 | 466 | 277 | 18 | 21 | 455 | 74 | 498 | 4.25e-25 | 108 |
| Msa0378380 | MtrunA17_Chr5g0436281 | 26.077 | 418 | 258 | 14 | 58 | 465 | 4 | 380 | 2.17e-22 | 98.6 |
| Msa0378380 | MtrunA17_Chr5g0406351 | 23.831 | 449 | 282 | 16 | 27 | 452 | 107 | 518 | 3.05e-21 | 96.7 |
| Msa0378380 | MtrunA17_Chr5g0406331 | 23.877 | 423 | 267 | 16 | 28 | 430 | 87 | 474 | 3.75e-18 | 87.0 |
| Msa0378380 | MtrunA17_Chr3g0112971 | 25.376 | 465 | 291 | 18 | 17 | 465 | 9 | 433 | 8.05e-18 | 85.5 |
| Msa0378380 | MtrunA17_Chr4g0058161 | 22.934 | 484 | 303 | 17 | 1 | 465 | 15 | 447 | 9.12e-16 | 79.3 |
| Msa0378380 | MtrunA17_Chr1g0159751 | 47.561 | 82 | 34 | 2 | 270 | 349 | 1 | 75 | 1.13e-15 | 72.0 |
| Msa0378380 | MtrunA17_Chr2g0281341 | 22.944 | 462 | 295 | 15 | 27 | 464 | 95 | 519 | 5.15e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378380 | AT5G09220.1 | 69.462 | 465 | 136 | 3 | 11 | 469 | 29 | 493 | 0.0 | 694 |
| Msa0378380 | AT1G77380.1 | 69.828 | 464 | 135 | 2 | 11 | 469 | 13 | 476 | 0.0 | 675 |
| Msa0378380 | AT5G63850.1 | 68.202 | 456 | 139 | 3 | 20 | 469 | 11 | 466 | 0.0 | 671 |
| Msa0378380 | AT1G44100.1 | 64.375 | 480 | 160 | 3 | 1 | 469 | 1 | 480 | 0.0 | 650 |
| Msa0378380 | AT1G58360.1 | 55.850 | 453 | 194 | 3 | 21 | 467 | 30 | 482 | 0.0 | 541 |
| Msa0378380 | AT1G10010.1 | 56.763 | 451 | 189 | 3 | 21 | 465 | 21 | 471 | 0.0 | 539 |
| Msa0378380 | AT1G10010.2 | 56.763 | 451 | 189 | 3 | 21 | 465 | 22 | 472 | 0.0 | 539 |
| Msa0378380 | AT5G49630.1 | 56.485 | 478 | 195 | 8 | 1 | 465 | 1 | 478 | 0.0 | 535 |
| Msa0378380 | AT5G23810.1 | 47.732 | 463 | 226 | 7 | 1 | 452 | 1 | 458 | 4.53e-142 | 416 |
| Msa0378380 | AT5G23810.2 | 48.571 | 350 | 171 | 5 | 1 | 345 | 1 | 346 | 1.21e-107 | 324 |
| Msa0378380 | AT5G23810.4 | 47.308 | 260 | 130 | 4 | 1 | 257 | 1 | 256 | 1.94e-75 | 238 |
| Msa0378380 | AT5G23810.5 | 46.698 | 212 | 108 | 3 | 1 | 209 | 1 | 210 | 7.65e-59 | 193 |
| Msa0378380 | AT5G23810.3 | 46.698 | 212 | 108 | 3 | 1 | 209 | 1 | 210 | 7.65e-59 | 193 |
| Msa0378380 | AT5G40780.1 | 27.660 | 470 | 287 | 11 | 14 | 463 | 7 | 443 | 4.97e-46 | 166 |
| Msa0378380 | AT1G24400.1 | 28.998 | 469 | 286 | 11 | 9 | 466 | 9 | 441 | 5.65e-46 | 166 |
| Msa0378380 | AT1G48640.1 | 28.178 | 472 | 293 | 9 | 12 | 466 | 11 | 453 | 1.05e-45 | 165 |
| Msa0378380 | AT1G67640.1 | 29.747 | 474 | 292 | 10 | 1 | 466 | 1 | 441 | 1.75e-44 | 162 |
| Msa0378380 | AT5G40780.3 | 28.235 | 425 | 271 | 9 | 43 | 463 | 1 | 395 | 7.24e-42 | 154 |
| Msa0378380 | AT5G40780.2 | 28.235 | 425 | 271 | 9 | 43 | 463 | 1 | 395 | 7.24e-42 | 154 |
| Msa0378380 | AT3G01760.1 | 26.923 | 468 | 300 | 10 | 9 | 461 | 2 | 442 | 2.30e-41 | 153 |
| Msa0378380 | AT1G61270.1 | 28.507 | 442 | 276 | 9 | 28 | 461 | 34 | 443 | 8.41e-40 | 149 |
| Msa0378380 | AT1G71680.1 | 28.477 | 453 | 271 | 10 | 28 | 466 | 35 | 448 | 1.52e-37 | 143 |
| Msa0378380 | AT1G71680.2 | 30.539 | 334 | 193 | 8 | 28 | 347 | 35 | 343 | 2.91e-33 | 129 |
| Msa0378380 | AT1G08230.2 | 27.938 | 451 | 286 | 12 | 26 | 465 | 26 | 448 | 6.85e-32 | 127 |
| Msa0378380 | AT1G25530.1 | 26.477 | 457 | 297 | 11 | 13 | 463 | 14 | 437 | 8.17e-31 | 124 |
| Msa0378380 | AT5G41800.1 | 25.702 | 463 | 286 | 15 | 26 | 468 | 25 | 449 | 2.72e-26 | 111 |
| Msa0378380 | AT2G39890.2 | 25.481 | 416 | 263 | 13 | 58 | 465 | 63 | 439 | 1.35e-22 | 100 |
| Msa0378380 | AT2G39890.1 | 25.481 | 416 | 263 | 13 | 58 | 465 | 63 | 439 | 1.35e-22 | 100 |
| Msa0378380 | AT2G39890.3 | 25.481 | 416 | 263 | 13 | 58 | 465 | 4 | 380 | 1.85e-22 | 99.4 |
| Msa0378380 | AT2G36590.1 | 25.436 | 401 | 248 | 15 | 33 | 422 | 30 | 390 | 2.06e-21 | 96.7 |
| Msa0378380 | AT1G08230.4 | 29.582 | 311 | 193 | 7 | 163 | 465 | 37 | 329 | 7.47e-21 | 94.0 |
| Msa0378380 | AT1G08230.6 | 29.582 | 311 | 193 | 7 | 163 | 465 | 37 | 329 | 7.47e-21 | 94.0 |
| Msa0378380 | AT1G08230.5 | 29.582 | 311 | 193 | 7 | 163 | 465 | 37 | 329 | 7.47e-21 | 94.0 |
| Msa0378380 | AT1G08230.3 | 29.582 | 311 | 193 | 7 | 163 | 465 | 56 | 348 | 8.10e-21 | 94.0 |
| Msa0378380 | AT3G55740.1 | 25.178 | 421 | 258 | 15 | 58 | 465 | 60 | 436 | 2.20e-20 | 93.6 |
| Msa0378380 | AT3G55740.2 | 24.703 | 421 | 260 | 14 | 58 | 465 | 4 | 380 | 2.40e-20 | 93.2 |
| Msa0378380 | AT3G55740.3 | 24.703 | 421 | 260 | 14 | 58 | 465 | 4 | 380 | 2.40e-20 | 93.2 |
| Msa0378380 | AT4G35180.1 | 24.429 | 438 | 286 | 11 | 27 | 451 | 57 | 462 | 4.12e-15 | 77.8 |
| Msa0378380 | AT1G47670.1 | 23.377 | 462 | 293 | 15 | 27 | 464 | 93 | 517 | 3.16e-12 | 68.9 |
| Msa0378380 | AT5G02170.1 | 21.934 | 424 | 288 | 11 | 2 | 422 | 105 | 488 | 4.19e-11 | 65.5 |
Find 110 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCATTTATAACTCCATTT+TGG | 0.096747 | 3_1:+79141462 | None:intergenic |
| TCTTTCACCTATTCCTTTAT+TGG | 0.119863 | 3_1:-79142541 | Msa0378380:CDS |
| TCCTTTCTTCAATGATGTTT+TGG | 0.143872 | 3_1:-79141562 | Msa0378380:CDS |
| CTACAATGACTTGTTCATTT+TGG | 0.151530 | 3_1:+79140973 | None:intergenic |
| TCCTTCAAGGGTAGCCTTAC+AGG | 0.203563 | 3_1:-79142385 | Msa0378380:CDS |
| TCAAATTCTCATTGAAATTC+AGG | 0.204663 | 3_1:-79142275 | Msa0378380:intron |
| ACCTATTCCTTTATTGGCCT+TGG | 0.221167 | 3_1:-79142535 | Msa0378380:CDS |
| GAATTTGAGAAAAGAAAATT+TGG | 0.225678 | 3_1:+79142611 | None:intergenic |
| TAAATTTGAAGATTCTTTCT+TGG | 0.240994 | 3_1:+79141201 | None:intergenic |
| TACTTGGAGCAGTAGGGTTT+TGG | 0.256465 | 3_1:-79141536 | Msa0378380:CDS |
| ACTGGAAAATAGACTGTTAA+AGG | 0.269131 | 3_1:+79141513 | None:intergenic |
| GGAAGCTGTTCACACCATTC+TGG | 0.269142 | 3_1:-79143902 | Msa0378380:CDS |
| TCCCAAAATGGAGTTATAAA+TGG | 0.282029 | 3_1:-79141464 | Msa0378380:CDS |
| GTCATCATCATCATACAAAT+TGG | 0.302533 | 3_1:+79144336 | None:intergenic |
| GAATACCGAATTCCAATTCC+TGG | 0.303298 | 3_1:-79141669 | Msa0378380:CDS |
| ACAACAAAGAAACCTGCTTT+TGG | 0.304532 | 3_1:-79145569 | Msa0378380:five_prime_UTR |
| GCAATATCAATGAGCCAATA+TGG | 0.308652 | 3_1:+79141801 | None:intergenic |
| CACACCTATACTTATCTTTG+TGG | 0.330592 | 3_1:+79141914 | None:intergenic |
| TAAATCTATTCAGATTAATA+TGG | 0.331283 | 3_1:-79141629 | Msa0378380:CDS |
| GTTCAGTACACAAATCTTTA+CGG | 0.334346 | 3_1:-79143419 | Msa0378380:CDS |
| GCTCAGTTGGGTTGGGTGAT+TGG | 0.347023 | 3_1:-79144036 | Msa0378380:CDS |
| TTAGCTGAATGTTATCGAAT+TGG | 0.352508 | 3_1:-79143961 | Msa0378380:CDS |
| TAGGGTTGAAAACCAGGAAT+TGG | 0.354439 | 3_1:+79141657 | None:intergenic |
| CGAATTGGCGATCCTCATTA+CGG | 0.356500 | 3_1:-79143946 | Msa0378380:CDS |
| CTAAATATAACCTGCAACTT+TGG | 0.358818 | 3_1:+79142501 | None:intergenic |
| CTAGCAGTTGCCAAAGTTGC+AGG | 0.362617 | 3_1:-79142511 | Msa0378380:intron |
| TGCTAGACCAAGGCCAATAA+AGG | 0.370826 | 3_1:+79142528 | None:intergenic |
| TGAAGATTCTTTCTTGGAAA+AGG | 0.373430 | 3_1:+79141207 | None:intergenic |
| TCTGAATAGATTTAGATTGT+AGG | 0.380758 | 3_1:+79141638 | None:intergenic |
| GTTTGGTAGGTGCCGTCAAT+TGG | 0.382448 | 3_1:+79144533 | None:intergenic |
| AATCTTTACGGAACTGCAAT+AGG | 0.394383 | 3_1:-79143407 | Msa0378380:CDS |
| CTGAATAGATTTAGATTGTA+GGG | 0.395935 | 3_1:+79141639 | None:intergenic |
| GTATCAGTTGTGGCTGTTGT+TGG | 0.403765 | 3_1:-79141405 | Msa0378380:CDS |
| TTGGGATTACTTGGAGCAGT+AGG | 0.409541 | 3_1:-79141543 | Msa0378380:CDS |
| AAAGAGAAACTATACTTTCA+TGG | 0.411359 | 3_1:-79143923 | Msa0378380:CDS |
| GTAATAATAATCACCTTGTT+TGG | 0.412941 | 3_1:+79144516 | None:intergenic |
| GAAAACCAGGAATTGGAATT+CGG | 0.418612 | 3_1:+79141664 | None:intergenic |
| TCCTGTAAGGCTACCCTTGA+AGG | 0.421245 | 3_1:+79142384 | None:intergenic |
| AATCCATACATGATAGCATT+TGG | 0.426053 | 3_1:-79142640 | Msa0378380:CDS |
| GCAATAGGATACACAATTGC+GGG | 0.428317 | 3_1:-79143392 | Msa0378380:CDS |
| GCTGAGACAGGGCAATAAAA+AGG | 0.429469 | 3_1:-79142714 | Msa0378380:intron |
| CTAGCACTATTGTTATTCAA+TGG | 0.436547 | 3_1:+79141241 | None:intergenic |
| AGAAGGGTTGCGCGTATACT+TGG | 0.437084 | 3_1:+79141742 | None:intergenic |
| GGGCAATAGCTCAGTTGGGT+TGG | 0.438417 | 3_1:-79144044 | Msa0378380:CDS |
| GAAGCTGTTCACACCATTCT+GGG | 0.441958 | 3_1:-79143901 | Msa0378380:intron |
| ACTCCAAATGCTATCATGTA+TGG | 0.442408 | 3_1:+79142637 | None:intergenic |
| GACAGAAAATGGTTCCTTCA+AGG | 0.449757 | 3_1:-79142398 | Msa0378380:intron |
| TTTCTCGACGAAAGCAAAGA+AGG | 0.450672 | 3_1:+79141725 | None:intergenic |
| TCTGACTGTTTGCATTCCTC+AGG | 0.454495 | 3_1:-79142691 | Msa0378380:CDS |
| TATCAGTTGTGGCTGTTGTT+GGG | 0.456332 | 3_1:-79141404 | Msa0378380:CDS |
| CACATAATAACAGCAGTTGT+AGG | 0.459141 | 3_1:-79144090 | Msa0378380:CDS |
| GATCACTCACATCATGCTAA+TGG | 0.460901 | 3_1:+79143367 | None:intergenic |
| TGGGGAACTTTCCAAGCTCT+TGG | 0.462799 | 3_1:-79142325 | Msa0378380:CDS |
| TTTCAATAATCAGTTGTGAA+TGG | 0.464770 | 3_1:+79141342 | None:intergenic |
| TGCATGGGTTATGCAGCATT+TGG | 0.465101 | 3_1:-79141864 | Msa0378380:CDS |
| GGTTTCAATGACACCCTTTG+TGG | 0.466023 | 3_1:-79143446 | Msa0378380:CDS |
| ACCAAGGCCAATAAAGGAAT+AGG | 0.466847 | 3_1:+79142534 | None:intergenic |
| TAGTTTCTCTTTCCGTAATG+AGG | 0.467007 | 3_1:+79143934 | None:intergenic |
| GGCAATAGCTCAGTTGGGTT+GGG | 0.467438 | 3_1:-79144043 | Msa0378380:CDS |
| GCATTTGGAGACACAGCACC+AGG | 0.467683 | 3_1:-79141849 | Msa0378380:CDS |
| ATAACAGCAGTTGTAGGATC+AGG | 0.483816 | 3_1:-79144084 | Msa0378380:CDS |
| TTCCAATGCTTACTCCTGTA+AGG | 0.491026 | 3_1:+79142371 | None:intergenic |
| AGCATGGGCAATAGCTCAGT+TGG | 0.492596 | 3_1:-79144049 | Msa0378380:CDS |
| CAAGCCACAAAGATAAGTAT+AGG | 0.492781 | 3_1:-79141918 | Msa0378380:CDS |
| AGGCTATGTTGCCAAGAGCT+TGG | 0.496753 | 3_1:+79142314 | None:intergenic |
| ACAGAAAATGGTTCCTTCAA+GGG | 0.502482 | 3_1:-79142397 | Msa0378380:intron |
| CCCAAAACATCATTGAAGAA+AGG | 0.503059 | 3_1:+79141561 | None:intergenic |
| TAATAATCACCTTGTTTGGT+AGG | 0.503353 | 3_1:+79144520 | None:intergenic |
| GAAAGCAATAAATGTTACAT+TGG | 0.503783 | 3_1:+79141319 | None:intergenic |
| TTATATGCTTTGTGGCTGCA+TGG | 0.505265 | 3_1:-79141880 | Msa0378380:CDS |
| GATGACCGTCTCAAAAGAAC+AGG | 0.508021 | 3_1:-79144319 | Msa0378380:intron |
| AGATTGTAGGGTTGAAAACC+AGG | 0.509683 | 3_1:+79141651 | None:intergenic |
| GTGAAATGCAGTCCAATTGA+CGG | 0.513494 | 3_1:-79144545 | Msa0378380:five_prime_UTR |
| GCTATCGTAATTCACCTTGT+GGG | 0.513660 | 3_1:-79141771 | Msa0378380:CDS |
| CAGGAGTGTTGTCGTTAGCA+TGG | 0.516340 | 3_1:-79144065 | Msa0378380:CDS |
| TAACATTTATTGCTTTCTTG+AGG | 0.518101 | 3_1:-79141313 | Msa0378380:three_prime_UTR |
| TGGGATTACTTGGAGCAGTA+GGG | 0.521905 | 3_1:-79141542 | Msa0378380:CDS |
| CGCTATCGTAATTCACCTTG+TGG | 0.523493 | 3_1:-79141772 | Msa0378380:CDS |
| GACTGTTTGCATTCCTCAGG+AGG | 0.526744 | 3_1:-79142688 | Msa0378380:CDS |
| GCATGGGCAATAGCTCAGTT+GGG | 0.527744 | 3_1:-79144048 | Msa0378380:CDS |
| TGATGAAGCAAGGAGGGGAG+CGG | 0.529139 | 3_1:-79140999 | Msa0378380:three_prime_UTR |
| TGTTTGATATACATCTCCAC+TGG | 0.530626 | 3_1:+79141495 | None:intergenic |
| GTTTCAATGACACCCTTTGT+GGG | 0.537172 | 3_1:-79143445 | Msa0378380:CDS |
| TATATGCTTTGTGGCTGCAT+GGG | 0.540477 | 3_1:-79141879 | Msa0378380:CDS |
| TGTGGCTGTTGTTGGGTCAG+TGG | 0.549777 | 3_1:-79141397 | Msa0378380:CDS |
| TTCTCGACGAAAGCAAAGAA+GGG | 0.555174 | 3_1:+79141726 | None:intergenic |
| TTACTGTGAAATCCAAAAGC+AGG | 0.556622 | 3_1:+79145557 | None:intergenic |
| AGCCTTACAGGAGTAAGCAT+TGG | 0.562434 | 3_1:-79142373 | Msa0378380:CDS |
| GTACTGAACTATCCCACAAA+GGG | 0.571823 | 3_1:+79143433 | None:intergenic |
| GCACCAGGGAACTTACTCAC+TGG | 0.573888 | 3_1:-79141834 | Msa0378380:CDS |
| CTGAAGAAAATCATAACTGA+AGG | 0.583795 | 3_1:+79144012 | None:intergenic |
| AGGAGTGTTGTCGTTAGCAT+GGG | 0.586525 | 3_1:-79144064 | Msa0378380:CDS |
| ATCTATTCAGATTAATATGG+AGG | 0.594981 | 3_1:-79141626 | Msa0378380:CDS |
| TCTAGAATTTGACATGGAGG+TGG | 0.597976 | 3_1:-79144398 | Msa0378380:exon |
| ATGTCTTGTAGTATCAGTTG+TGG | 0.607208 | 3_1:-79141415 | Msa0378380:CDS |
| AAATTGGAGTCTTTGTGTGA+AGG | 0.608942 | 3_1:+79144352 | None:intergenic |
| TTGACGGCACCTACCAAACA+AGG | 0.613543 | 3_1:-79144529 | Msa0378380:intron |
| ATTCCAGTGAGTAAGTTCCC+TGG | 0.614262 | 3_1:+79141831 | None:intergenic |
| TGCAATAGGATACACAATTG+CGG | 0.626230 | 3_1:-79143393 | Msa0378380:CDS |
| GTATAAAGAGTTACCCAGAA+TGG | 0.630066 | 3_1:+79143888 | None:intergenic |
| TTGAGAATATGAATATGCAA+AGG | 0.631765 | 3_1:+79142294 | None:intergenic |
| AACTTGGGTAGTGATTTATG+TGG | 0.632196 | 3_1:-79141279 | Msa0378380:three_prime_UTR |
| ATACTTGGTATGCTCCCACA+AGG | 0.667351 | 3_1:+79141757 | None:intergenic |
| TGTACTGAACTATCCCACAA+AGG | 0.675008 | 3_1:+79143432 | None:intergenic |
| CACAAGGTGAATTACGATAG+CGG | 0.685183 | 3_1:+79141773 | None:intergenic |
| CTTTGGCAACTGCTAGACCA+AGG | 0.697595 | 3_1:+79142518 | None:intergenic |
| ACACAATCTAGAATTTGACA+TGG | 0.702429 | 3_1:-79144404 | Msa0378380:exon |
| CATTTGGAGACACAGCACCA+GGG | 0.729488 | 3_1:-79141848 | Msa0378380:CDS |
| CAATCTAGAATTTGACATGG+AGG | 0.734277 | 3_1:-79144401 | Msa0378380:exon |
| AATCAACATTGCTATCACAG+TGG | 0.767055 | 3_1:+79141584 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTTTTTTTTA+AGG | - | chr3_1:79141491-79141510 | Msa0378380:CDS | 0.0% |
| !!! | TTTTTTTTTTTTACAAGAAA+TGG | - | chr3_1:79141435-79141454 | Msa0378380:CDS | 10.0% |
| !! | CAAAAAATAAATAGTAAAAT+TGG | + | chr3_1:79141784-79141803 | None:intergenic | 10.0% |
| !! | TGAATTTAATTAATGTAAAA+TGG | + | chr3_1:79142326-79142345 | None:intergenic | 10.0% |
| !!! | TAAATAGTAAAATTTTGAAA+TGG | - | chr3_1:79143051-79143070 | Msa0378380:intron | 10.0% |
| !!! | AAATCAATATCAATTTTTTT+GGG | + | chr3_1:79143313-79143332 | None:intergenic | 10.0% |
| !!! | AAAATCAATATCAATTTTTT+TGG | + | chr3_1:79143314-79143333 | None:intergenic | 10.0% |
| !!! | AAGATAATTTTATTCTTAAT+TGG | + | chr3_1:79143366-79143385 | None:intergenic | 10.0% |
| !!! | ATTTTATTCAATTTATCTTT+TGG | - | chr3_1:79143464-79143483 | Msa0378380:intron | 10.0% |
| !! | TAAAAATAAATTTGTAACAA+TGG | + | chr3_1:79143646-79143665 | None:intergenic | 10.0% |
| !!! | ATTGTTACAAATTTATTTTT+AGG | - | chr3_1:79143645-79143664 | Msa0378380:intron | 10.0% |
| !!! | AATCATCATTCATTTTTATT+AGG | - | chr3_1:79141133-79141152 | Msa0378380:intron | 15.0% |
| !! | GATATTATAATCAACAATAA+GGG | + | chr3_1:79141175-79141194 | None:intergenic | 15.0% |
| !! | AGATATTATAATCAACAATA+AGG | + | chr3_1:79141176-79141195 | None:intergenic | 15.0% |
| !!! | ATTGTTTTTTTTAACAAGAA+TGG | - | chr3_1:79141464-79141483 | Msa0378380:CDS | 15.0% |
| !!! | TTTTTTTTTTTAAGGAAGAA+TGG | - | chr3_1:79141499-79141518 | Msa0378380:CDS | 15.0% |
| !! | TCAATAATTCTTTCAAAAAA+TGG | + | chr3_1:79141613-79141632 | None:intergenic | 15.0% |
| !! | AAATAAATAGTAAAATTGGA+CGG | + | chr3_1:79141780-79141799 | None:intergenic | 15.0% |
| !! | ATTTGTAACCAAAATAATAA+TGG | + | chr3_1:79141837-79141856 | None:intergenic | 15.0% |
| !!! | CAATATTCACAATTTTTTTT+TGG | + | chr3_1:79141913-79141932 | None:intergenic | 15.0% |
| !! | TAAATCTATTCAGATTAATA+TGG | - | chr3_1:79144944-79144963 | Msa0378380:intron | 15.0% |
| !! | CAAAAAATTAAATCAAACAA+CGG | + | chr3_1:79145556-79145575 | None:intergenic | 15.0% |
| !! | TTCATTCTTCTCAAATTTAT+TGG | - | chr3_1:79141102-79141121 | Msa0378380:intron | 20.0% |
| !!! | TGATTTTGGGTTTTTTTTAT+TGG | - | chr3_1:79141314-79141333 | Msa0378380:three_prime_UTR | 20.0% |
| !!! | ACTATTTATTTTTTGTGCAA+AGG | - | chr3_1:79141789-79141808 | Msa0378380:CDS | 20.0% |
| !!! | AAATAATAATGGAGTCAAAT+TGG | + | chr3_1:79141826-79141845 | None:intergenic | 20.0% |
| !!! | ATTTGACTCCATTATTATTT+TGG | - | chr3_1:79141826-79141845 | Msa0378380:CDS | 20.0% |
| !!! | ATTATATGTATGATGATGAT+AGG | - | chr3_1:79142357-79142376 | Msa0378380:CDS | 20.0% |
| !! | ATATGATAAAAAGTGACAAA+AGG | - | chr3_1:79142422-79142441 | Msa0378380:intron | 20.0% |
| !!! | ACTATTTTTGATATTCTGTT+TGG | - | chr3_1:79142834-79142853 | Msa0378380:intron | 20.0% |
| !! | TTTAATAATCACTACTAGAA+AGG | - | chr3_1:79142921-79142940 | Msa0378380:intron | 20.0% |
| !! | ACATATATAGAAATCAGATT+TGG | - | chr3_1:79143437-79143456 | Msa0378380:CDS | 20.0% |
| !! | TTTGACAAAATTTGTAACAA+TGG | + | chr3_1:79143619-79143638 | None:intergenic | 20.0% |
| !!! | CAAGAATATTTAGTTTGATA+TGG | - | chr3_1:79143804-79143823 | Msa0378380:intron | 20.0% |
| !!! | TGTTTTAATTAAACTGGTTT+TGG | - | chr3_1:79143837-79143856 | Msa0378380:intron | 20.0% |
| !! | GAATTTGAGAAAAGAAAATT+TGG | + | chr3_1:79143965-79143984 | None:intergenic | 20.0% |
| !!! | ACCATATTAAGTTTTTATAC+CGG | - | chr3_1:79144453-79144472 | Msa0378380:intron | 20.0% |
| !! | TCTGAAAAAAGTTTATAAAC+CGG | + | chr3_1:79144503-79144522 | None:intergenic | 20.0% |
| !! | AGAAAATTGTGATAAAAAGA+TGG | - | chr3_1:79144866-79144885 | Msa0378380:intron | 20.0% |
| !! | TAAATTTGAAGATTCTTTCT+TGG | + | chr3_1:79145375-79145394 | None:intergenic | 20.0% |
| !!! | TTTAATTTTTTGATGAAGCA+AGG | - | chr3_1:79145564-79145583 | Msa0378380:five_prime_UTR | 20.0% |
| !!! | CATCATTCATTTTTATTAGG+TGG | - | chr3_1:79141136-79141155 | Msa0378380:intron | 25.0% |
| !!! | TGTTTTAATTATACTCTGTC+TGG | - | chr3_1:79141679-79141698 | Msa0378380:CDS | 25.0% |
| !!! | ATACTTTTTTTGGTACGAAT+TGG | + | chr3_1:79141756-79141775 | None:intergenic | 25.0% |
| !!! | AAAAACCTCTTTTGTTTCTT+TGG | - | chr3_1:79141964-79141983 | Msa0378380:intron | 25.0% |
| ! | GTAATAATAATCACCTTGTT+TGG | + | chr3_1:79142060-79142079 | None:intergenic | 25.0% |
| ! | AGACAAAATAATTGAGAGAA+GGG | + | chr3_1:79142090-79142109 | None:intergenic | 25.0% |
| ! | AAAGAGAAACTATACTTTCA+TGG | - | chr3_1:79142650-79142669 | Msa0378380:CDS | 25.0% |
| ! | AAAATCGAACCAAATCAAAT+CGG | - | chr3_1:79142747-79142766 | Msa0378380:intron | 25.0% |
| ! | TTATGAAGCAATAGTGTTTA+TGG | - | chr3_1:79142779-79142798 | Msa0378380:intron | 25.0% |
| !! | ATATAGAAATCAGATTTGGT+TGG | - | chr3_1:79143441-79143460 | Msa0378380:CDS | 25.0% |
| ! | AAAATTTGTAACAATGGATG+TGG | + | chr3_1:79143613-79143632 | None:intergenic | 25.0% |
| ! | TATTCTTGTCAACAGAAATA+AGG | + | chr3_1:79143792-79143811 | None:intergenic | 25.0% |
| !!! | TGAGTGTGTTTTAATTAAAC+TGG | - | chr3_1:79143831-79143850 | Msa0378380:intron | 25.0% |
| !!! | TTCCAGATTTTGATAAAATG+TGG | - | chr3_1:79143982-79144001 | Msa0378380:CDS | 25.0% |
| ! | TTGAGAATATGAATATGCAA+AGG | + | chr3_1:79144282-79144301 | None:intergenic | 25.0% |
| ! | TCAAATTCTCATTGAAATTC+AGG | - | chr3_1:79144298-79144317 | Msa0378380:intron | 25.0% |
| !! | CCATATTAAGTTTTTATACC+GGG | - | chr3_1:79144454-79144473 | Msa0378380:intron | 25.0% |
| ! | ATGCATTCTTCTTATAAAAC+CGG | - | chr3_1:79144481-79144500 | Msa0378380:intron | 25.0% |
| !!! | TATAAACTTTTTTCAGAACG+TGG | - | chr3_1:79144506-79144525 | Msa0378380:intron | 25.0% |
| !!! | ATAAACTTTTTTCAGAACGT+GGG | - | chr3_1:79144507-79144526 | Msa0378380:intron | 25.0% |
| ! | TATGATAAATTTAACTCCAC+AGG | - | chr3_1:79144591-79144610 | Msa0378380:intron | 25.0% |
| !!! | TTCATTGTTTTTACTTCAGA+TGG | + | chr3_1:79144634-79144653 | None:intergenic | 25.0% |
| !! | CTGGAATTTTTAATCCATAT+TGG | - | chr3_1:79144758-79144777 | Msa0378380:intron | 25.0% |
| !!! | CGGTATTCTTTGTTTATTTT+AGG | + | chr3_1:79144892-79144911 | None:intergenic | 25.0% |
| ! | CTGAATAGATTTAGATTGTA+GGG | + | chr3_1:79144937-79144956 | None:intergenic | 25.0% |
| ! | TCTGAATAGATTTAGATTGT+AGG | + | chr3_1:79144938-79144957 | None:intergenic | 25.0% |
| ! | ATCTATTCAGATTAATATGG+AGG | - | chr3_1:79144947-79144966 | Msa0378380:intron | 25.0% |
| ! | AACAAAAAAAGATCCCAAAA+TGG | - | chr3_1:79145097-79145116 | Msa0378380:intron | 25.0% |
| !! | TCCATTTATAACTCCATTTT+GGG | + | chr3_1:79145113-79145132 | None:intergenic | 25.0% |
| !! | ATCCATTTATAACTCCATTT+TGG | + | chr3_1:79145114-79145133 | None:intergenic | 25.0% |
| ! | TTTCAATAATCAGTTGTGAA+TGG | + | chr3_1:79145234-79145253 | None:intergenic | 25.0% |
| ! | GAAAGCAATAAATGTTACAT+TGG | + | chr3_1:79145257-79145276 | None:intergenic | 25.0% |
| ! | TAACATTTATTGCTTTCTTG+AGG | - | chr3_1:79145260-79145279 | Msa0378380:intron | 25.0% |
| TAGACACATAGAAAAAGAAG+TGG | - | chr3_1:79141339-79141358 | Msa0378380:exon | 30.0% | |
| ! | CATTAGTATGGGGTAATTTT+AGG | + | chr3_1:79141727-79141746 | None:intergenic | 30.0% |
| CTAAAATTACCCCATACTAA+TGG | - | chr3_1:79141725-79141744 | Msa0378380:CDS | 30.0% | |
| !!! | TTTTTTTGGTACGAATTGGA+CGG | + | chr3_1:79141752-79141771 | None:intergenic | 30.0% |
| !!! | ATTGGACGGTATACTTTTTT+TGG | + | chr3_1:79141766-79141785 | None:intergenic | 30.0% |
| ! | AATAATGGAGTCAAATTGGA+TGG | + | chr3_1:79141822-79141841 | None:intergenic | 30.0% |
| ! | TAATAATCACCTTGTTTGGT+AGG | + | chr3_1:79142056-79142075 | None:intergenic | 30.0% |
| TAATTGAGAGAAGGGTTATT+TGG | + | chr3_1:79142082-79142101 | None:intergenic | 30.0% | |
| GAGACAAAATAATTGAGAGA+AGG | + | chr3_1:79142091-79142110 | None:intergenic | 30.0% | |
| ! | TAGATTGTGTTCTAAATCTC+TGG | + | chr3_1:79142159-79142178 | None:intergenic | 30.0% |
| ! | ACACAATCTAGAATTTGACA+TGG | - | chr3_1:79142169-79142188 | Msa0378380:intron | 30.0% |
| GTCATCATCATCATACAAAT+TGG | + | chr3_1:79142240-79142259 | None:intergenic | 30.0% | |
| CTGAAGAAAATCATAACTGA+AGG | + | chr3_1:79142564-79142583 | None:intergenic | 30.0% | |
| TTAGCTGAATGTTATCGAAT+TGG | - | chr3_1:79142612-79142631 | Msa0378380:CDS | 30.0% | |
| !!! | GTTTGCTGTTTCTTTTGAAA+AGG | - | chr3_1:79142893-79142912 | Msa0378380:intron | 30.0% |
| !!! | TGACTTTGTTTTTGACTTCT+TGG | + | chr3_1:79142961-79142980 | None:intergenic | 30.0% |
| ! | GAGAATCAAATGATTTTTGC+AGG | - | chr3_1:79143103-79143122 | Msa0378380:intron | 30.0% |
| ! | AATCAAATGATTTTTGCAGG+AGG | - | chr3_1:79143106-79143125 | Msa0378380:intron | 30.0% |
| GTTCAGTACACAAATCTTTA+CGG | - | chr3_1:79143154-79143173 | Msa0378380:intron | 30.0% | |
| ACAGAAATAAGGTCAATTAC+TGG | + | chr3_1:79143781-79143800 | None:intergenic | 30.0% | |
| AATCCATACATGATAGCATT+TGG | - | chr3_1:79143933-79143952 | Msa0378380:CDS | 30.0% | |
| ! | CACCACATTTTATCAAAATC+TGG | + | chr3_1:79143987-79144006 | None:intergenic | 30.0% |
| !! | CAGATTTTGATAAAATGTGG+TGG | - | chr3_1:79143985-79144004 | Msa0378380:CDS | 30.0% |
| TCTTTCACCTATTCCTTTAT+TGG | - | chr3_1:79144032-79144051 | Msa0378380:CDS | 30.0% | |
| CTAAATATAACCTGCAACTT+TGG | + | chr3_1:79144075-79144094 | None:intergenic | 30.0% | |
| ATAACATTCCATTTCTCAGA+AGG | - | chr3_1:79144114-79144133 | Msa0378380:CDS | 30.0% | |
| AATTGTTCTACGACAGAAAA+TGG | - | chr3_1:79144164-79144183 | Msa0378380:intron | 30.0% | |
| !! | GTTTTGAACATAGAGAGAAA+AGG | + | chr3_1:79144328-79144347 | None:intergenic | 30.0% |
| ATTGGAAAAAACCTAAGACA+TGG | + | chr3_1:79144358-79144377 | None:intergenic | 30.0% | |
| CACCAAATTCAATAGTGTTT+GGG | + | chr3_1:79144392-79144411 | None:intergenic | 30.0% | |
| CCCGGTATAAAAACTTAATA+TGG | + | chr3_1:79144457-79144476 | None:intergenic | 30.0% | |
| !!! | TTCAGATGGTGGATTTTTTA+TGG | + | chr3_1:79144620-79144639 | None:intergenic | 30.0% |
| !!! | ATTGTTTTTACTTCAGATGG+TGG | + | chr3_1:79144631-79144650 | None:intergenic | 30.0% |
| ! | ACTGCATTTTATATGCTTTG+TGG | - | chr3_1:79144685-79144704 | Msa0378380:intron | 30.0% |
| ! | TCCTTTCTTCAATGATGTTT+TGG | - | chr3_1:79145011-79145030 | Msa0378380:intron | 30.0% |
| ! | CCTTTCTTCAATGATGTTTT+GGG | - | chr3_1:79145012-79145031 | Msa0378380:intron | 30.0% |
| !!! | AATGATGTTTTGGGATTACT+TGG | - | chr3_1:79145021-79145040 | Msa0378380:intron | 30.0% |
| ACTGGAAAATAGACTGTTAA+AGG | + | chr3_1:79145063-79145082 | None:intergenic | 30.0% | |
| ! | TTTAACAGTCTATTTTCCAG+TGG | - | chr3_1:79145062-79145081 | Msa0378380:intron | 30.0% |
| TCCCAAAATGGAGTTATAAA+TGG | - | chr3_1:79145109-79145128 | Msa0378380:intron | 30.0% | |
| ! | CTAGCACTATTGTTATTCAA+TGG | + | chr3_1:79145335-79145354 | None:intergenic | 30.0% |
| TGAAGATTCTTTCTTGGAAA+AGG | + | chr3_1:79145369-79145388 | None:intergenic | 30.0% | |
| TATATTTCTCCGTTATTGTG+AGG | - | chr3_1:79145415-79145434 | Msa0378380:intron | 30.0% | |
| ! | CAATTTGTTCCTCACAATAA+CGG | + | chr3_1:79145427-79145446 | None:intergenic | 30.0% |
| TATTGTGAGGAACAAATTGA+AGG | - | chr3_1:79145428-79145447 | Msa0378380:intron | 30.0% | |
| !!! | AATTTTTTGATGAAGCAAGG+AGG | - | chr3_1:79145567-79145586 | Msa0378380:five_prime_UTR | 30.0% |
| !!! | ATTTTTTGATGAAGCAAGGA+GGG | - | chr3_1:79145568-79145587 | Msa0378380:five_prime_UTR | 30.0% |
| ! | ACAACAAAGAAACCTGCTTT+TGG | - | chr3_1:79141004-79141023 | Msa0378380:three_prime_UTR | 35.0% |
| TTACTGTGAAATCCAAAAGC+AGG | + | chr3_1:79141019-79141038 | None:intergenic | 35.0% | |
| !!! | AAGAGTGAAGACACTGATTT+TGG | - | chr3_1:79141300-79141319 | Msa0378380:three_prime_UTR | 35.0% |
| !!! | AGAGTGAAGACACTGATTTT+GGG | - | chr3_1:79141301-79141320 | Msa0378380:three_prime_UTR | 35.0% |
| ! | ATTGTGTTCTAAATCTCTGG+AGG | + | chr3_1:79142156-79142175 | None:intergenic | 35.0% |
| ! | CAATCTAGAATTTGACATGG+AGG | - | chr3_1:79142172-79142191 | Msa0378380:intron | 35.0% |
| AAATTGGAGTCTTTGTGTGA+AGG | + | chr3_1:79142224-79142243 | None:intergenic | 35.0% | |
| !! | TAGTACCTGTTCTTTTGAGA+CGG | + | chr3_1:79142262-79142281 | None:intergenic | 35.0% |
| !!! | CAAAAGGTACTTTTTGAGAC+AGG | - | chr3_1:79142438-79142457 | Msa0378380:intron | 35.0% |
| CACATAATAACAGCAGTTGT+AGG | - | chr3_1:79142483-79142502 | Msa0378380:intron | 35.0% | |
| ! | TTTTCTTCAGTCTCATCACT+TGG | - | chr3_1:79142574-79142593 | Msa0378380:CDS | 35.0% |
| TAGTTTCTCTTTCCGTAATG+AGG | + | chr3_1:79142642-79142661 | None:intergenic | 35.0% | |
| GTATAAAGAGTTACCCAGAA+TGG | + | chr3_1:79142688-79142707 | None:intergenic | 35.0% | |
| ! | TTCAACAGTCCGATTTGATT+TGG | + | chr3_1:79142759-79142778 | None:intergenic | 35.0% |
| AATCTTTACGGAACTGCAAT+AGG | - | chr3_1:79143166-79143185 | Msa0378380:intron | 35.0% | |
| TGCAATAGGATACACAATTG+CGG | - | chr3_1:79143180-79143199 | Msa0378380:intron | 35.0% | |
| TAAAACTGATATCGTGCTTG+AGG | + | chr3_1:79143418-79143437 | None:intergenic | 35.0% | |
| !! | TTTGCTGTTAATCATAGCTG+AGG | - | chr3_1:79143568-79143587 | Msa0378380:intron | 35.0% |
| ! | TTGCTGTTAATCATAGCTGA+GGG | - | chr3_1:79143569-79143588 | Msa0378380:intron | 35.0% |
| ACAATGGATGTGGTACATAT+AGG | + | chr3_1:79143603-79143622 | None:intergenic | 35.0% | |
| ! | TACTGGTGTTAGATATGTTC+TGG | + | chr3_1:79143764-79143783 | None:intergenic | 35.0% |
| ACTCCAAATGCTATCATGTA+TGG | + | chr3_1:79143939-79143958 | None:intergenic | 35.0% | |
| !!! | TGCTTTTTCCTTCTGAGAAA+TGG | + | chr3_1:79144125-79144144 | None:intergenic | 35.0% |
| ACAGAAAATGGTTCCTTCAA+GGG | - | chr3_1:79144176-79144195 | Msa0378380:intron | 35.0% | |
| TGACAAAAGCCCAAAAAGTA+TGG | - | chr3_1:79144228-79144247 | Msa0378380:intron | 35.0% | |
| ! | GACAAAAGCCCAAAAAGTAT+GGG | - | chr3_1:79144229-79144248 | Msa0378380:intron | 35.0% |
| ! | ACAAAAGCCCAAAAAGTATG+GGG | - | chr3_1:79144230-79144249 | Msa0378380:intron | 35.0% |
| !! | GAAAGTTCCCCATACTTTTT+GGG | + | chr3_1:79144240-79144259 | None:intergenic | 35.0% |
| AAACTAGTGTACCATGTCTT+AGG | - | chr3_1:79144344-79144363 | Msa0378380:CDS | 35.0% | |
| AATAGTGTTTGGGCTTAAGT+GGG | + | chr3_1:79144382-79144401 | None:intergenic | 35.0% | |
| AGCCCAAACACTATTGAATT+TGG | - | chr3_1:79144387-79144406 | Msa0378380:CDS | 35.0% | |
| GCACCAAATTCAATAGTGTT+TGG | + | chr3_1:79144393-79144412 | None:intergenic | 35.0% | |
| TGGTGCGTAGATATAAATTG+TGG | - | chr3_1:79144407-79144426 | Msa0378380:exon | 35.0% | |
| GGTGCGTAGATATAAATTGT+GGG | - | chr3_1:79144408-79144427 | Msa0378380:five_prime_UTR | 35.0% | |
| TAAGAAGAATGCATAAGACC+CGG | + | chr3_1:79144475-79144494 | None:intergenic | 35.0% | |
| CAAGCCACAAAGATAAGTAT+AGG | - | chr3_1:79144655-79144674 | Msa0378380:intron | 35.0% | |
| CACACCTATACTTATCTTTG+TGG | + | chr3_1:79144662-79144681 | None:intergenic | 35.0% | |
| GCAATATCAATGAGCCAATA+TGG | + | chr3_1:79144775-79144794 | None:intergenic | 35.0% | |
| GAAAACCAGGAATTGGAATT+CGG | + | chr3_1:79144912-79144931 | None:intergenic | 35.0% | |
| AATCAACATTGCTATCACAG+TGG | + | chr3_1:79144992-79145011 | None:intergenic | 35.0% | |
| CCCAAAACATCATTGAAGAA+AGG | + | chr3_1:79145015-79145034 | None:intergenic | 35.0% | |
| TGTTTGATATACATCTCCAC+TGG | + | chr3_1:79145081-79145100 | None:intergenic | 35.0% | |
| ATGTCTTGTAGTATCAGTTG+TGG | - | chr3_1:79145158-79145177 | Msa0378380:intron | 35.0% | |
| TGAGGATGTAAAAAGCAACT+TGG | - | chr3_1:79145278-79145297 | Msa0378380:intron | 35.0% | |
| GAGGATGTAAAAAGCAACTT+GGG | - | chr3_1:79145279-79145298 | Msa0378380:intron | 35.0% | |
| AACTTGGGTAGTGATTTATG+TGG | - | chr3_1:79145294-79145313 | Msa0378380:intron | 35.0% | |
| AATTGAAGGTCTTGCTTTCT+TGG | - | chr3_1:79145442-79145461 | Msa0378380:intron | 35.0% | |
| ATTGAAGGTCTTGCTTTCTT+GGG | - | chr3_1:79145443-79145462 | Msa0378380:intron | 35.0% | |
| !!! | TTTTTTGATGAAGCAAGGAG+GGG | - | chr3_1:79145569-79145588 | Msa0378380:five_prime_UTR | 35.0% |
| ATTGGACGGTCCATTAGTAT+GGG | + | chr3_1:79141738-79141757 | None:intergenic | 40.0% | |
| AATTGGACGGTCCATTAGTA+TGG | + | chr3_1:79141739-79141758 | None:intergenic | 40.0% | |
| CAGCACCAAAGAAACAAAAG+AGG | + | chr3_1:79141972-79141991 | None:intergenic | 40.0% | |
| GTGAAATGCAGTCCAATTGA+CGG | - | chr3_1:79142028-79142047 | Msa0378380:intron | 40.0% | |
| ! | TCTAGAATTTGACATGGAGG+TGG | - | chr3_1:79142175-79142194 | Msa0378380:intron | 40.0% |
| !!! | GGTACTTTTTGAGACAGGAA+CGG | - | chr3_1:79142443-79142462 | Msa0378380:intron | 40.0% |
| !!! | TTTTTGAGACAGGAACGGTT+TGG | - | chr3_1:79142448-79142467 | Msa0378380:intron | 40.0% |
| ATAACAGCAGTTGTAGGATC+AGG | - | chr3_1:79142489-79142508 | Msa0378380:intron | 40.0% | |
| TCACACGCTTGTACTTGATT+TGG | - | chr3_1:79142978-79142997 | Msa0378380:intron | 40.0% | |
| GTTTCAATGACACCCTTTGT+GGG | - | chr3_1:79143128-79143147 | Msa0378380:intron | 40.0% | |
| GTACTGAACTATCCCACAAA+GGG | + | chr3_1:79143143-79143162 | None:intergenic | 40.0% | |
| TGTACTGAACTATCCCACAA+AGG | + | chr3_1:79143144-79143163 | None:intergenic | 40.0% | |
| GCAATAGGATACACAATTGC+GGG | - | chr3_1:79143181-79143200 | Msa0378380:intron | 40.0% | |
| GATCACTCACATCATGCTAA+TGG | + | chr3_1:79143209-79143228 | None:intergenic | 40.0% | |
| ! | ACCTATTCCTTTATTGGCCT+TGG | - | chr3_1:79144038-79144057 | Msa0378380:CDS | 40.0% |
| ACCAAGGCCAATAAAGGAAT+AGG | + | chr3_1:79144042-79144061 | None:intergenic | 40.0% | |
| GACAGAAAATGGTTCCTTCA+AGG | - | chr3_1:79144175-79144194 | Msa0378380:intron | 40.0% | |
| TTCCAATGCTTACTCCTGTA+AGG | + | chr3_1:79144205-79144224 | None:intergenic | 40.0% | |
| ! | GGAAAGTTCCCCATACTTTT+TGG | + | chr3_1:79144241-79144260 | None:intergenic | 40.0% |
| CAATAGTGTTTGGGCTTAAG+TGG | + | chr3_1:79144383-79144402 | None:intergenic | 40.0% | |
| !!! | GGATTTTTTATGGTGTCCTG+TGG | + | chr3_1:79144610-79144629 | None:intergenic | 40.0% |
| TTATATGCTTTGTGGCTGCA+TGG | - | chr3_1:79144693-79144712 | Msa0378380:intron | 40.0% | |
| TATATGCTTTGTGGCTGCAT+GGG | - | chr3_1:79144694-79144713 | Msa0378380:intron | 40.0% | |
| CACAAGGTGAATTACGATAG+CGG | + | chr3_1:79144803-79144822 | None:intergenic | 40.0% | |
| GCTATCGTAATTCACCTTGT+GGG | - | chr3_1:79144802-79144821 | Msa0378380:intron | 40.0% | |
| TTCTCGACGAAAGCAAAGAA+GGG | + | chr3_1:79144850-79144869 | None:intergenic | 40.0% | |
| TTTCTCGACGAAAGCAAAGA+AGG | + | chr3_1:79144851-79144870 | None:intergenic | 40.0% | |
| GAATACCGAATTCCAATTCC+TGG | - | chr3_1:79144904-79144923 | Msa0378380:intron | 40.0% | |
| TAGGGTTGAAAACCAGGAAT+TGG | + | chr3_1:79144919-79144938 | None:intergenic | 40.0% | |
| AGATTGTAGGGTTGAAAACC+AGG | + | chr3_1:79144925-79144944 | None:intergenic | 40.0% | |
| TATCAGTTGTGGCTGTTGTT+GGG | - | chr3_1:79145169-79145188 | Msa0378380:intron | 40.0% | |
| TTGGACGGTCCATTAGTATG+GGG | + | chr3_1:79141737-79141756 | None:intergenic | 45.0% | |
| GATGACCGTCTCAAAAGAAC+AGG | - | chr3_1:79142254-79142273 | Msa0378380:intron | 45.0% | |
| !! | AGGAGTGTTGTCGTTAGCAT+GGG | - | chr3_1:79142509-79142528 | Msa0378380:intron | 45.0% |
| CGAATTGGCGATCCTCATTA+CGG | - | chr3_1:79142627-79142646 | Msa0378380:CDS | 45.0% | |
| GAAGCTGTTCACACCATTCT+GGG | - | chr3_1:79142672-79142691 | Msa0378380:CDS | 45.0% | |
| GGTTTCAATGACACCCTTTG+TGG | - | chr3_1:79143127-79143146 | Msa0378380:intron | 45.0% | |
| !!! | AAACTGGTTTTGGCTGAGAC+AGG | - | chr3_1:79143847-79143866 | Msa0378380:intron | 45.0% |
| !!! | AACTGGTTTTGGCTGAGACA+GGG | - | chr3_1:79143848-79143867 | Msa0378380:intron | 45.0% |
| GCTGAGACAGGGCAATAAAA+AGG | - | chr3_1:79143859-79143878 | Msa0378380:intron | 45.0% | |
| TCTGACTGTTTGCATTCCTC+AGG | - | chr3_1:79143882-79143901 | Msa0378380:intron | 45.0% | |
| ! | ACATGAGTCTTTTCCTCCTG+AGG | + | chr3_1:79143901-79143920 | None:intergenic | 45.0% |
| TGCTAGACCAAGGCCAATAA+AGG | + | chr3_1:79144048-79144067 | None:intergenic | 45.0% | |
| AGCCTTACAGGAGTAAGCAT+TGG | - | chr3_1:79144200-79144219 | Msa0378380:intron | 45.0% | |
| GTTTGGGCTTAAGTGGGTAT+TGG | + | chr3_1:79144376-79144395 | None:intergenic | 45.0% | |
| ! | TGCATGGGTTATGCAGCATT+TGG | - | chr3_1:79144709-79144728 | Msa0378380:intron | 45.0% |
| ATTCCAGTGAGTAAGTTCCC+TGG | + | chr3_1:79144745-79144764 | None:intergenic | 45.0% | |
| CGCTATCGTAATTCACCTTG+TGG | - | chr3_1:79144801-79144820 | Msa0378380:intron | 45.0% | |
| ATACTTGGTATGCTCCCACA+AGG | + | chr3_1:79144819-79144838 | None:intergenic | 45.0% | |
| TTGGGATTACTTGGAGCAGT+AGG | - | chr3_1:79145030-79145049 | Msa0378380:intron | 45.0% | |
| TGGGATTACTTGGAGCAGTA+GGG | - | chr3_1:79145031-79145050 | Msa0378380:intron | 45.0% | |
| ! | TACTTGGAGCAGTAGGGTTT+TGG | - | chr3_1:79145037-79145056 | Msa0378380:intron | 45.0% |
| GTATCAGTTGTGGCTGTTGT+TGG | - | chr3_1:79145168-79145187 | Msa0378380:intron | 45.0% | |
| !! | AATAATATTATAATAAGAAT+TGG | + | chr3_1:79141864-79141883 | None:intergenic | 5.0% |
| !!! | TTATTTATTGATTTAATAAA+GGG | + | chr3_1:79143684-79143703 | None:intergenic | 5.0% |
| !!! | TTTATTTATTGATTTAATAA+AGG | + | chr3_1:79143685-79143704 | None:intergenic | 5.0% |
| ! | GTTTGGTAGGTGCCGTCAAT+TGG | + | chr3_1:79142043-79142062 | None:intergenic | 50.0% |
| TTGACGGCACCTACCAAACA+AGG | - | chr3_1:79142044-79142063 | Msa0378380:intron | 50.0% | |
| !! | CAGGAGTGTTGTCGTTAGCA+TGG | - | chr3_1:79142508-79142527 | Msa0378380:intron | 50.0% |
| AGCATGGGCAATAGCTCAGT+TGG | - | chr3_1:79142524-79142543 | Msa0378380:CDS | 50.0% | |
| GCATGGGCAATAGCTCAGTT+GGG | - | chr3_1:79142525-79142544 | Msa0378380:CDS | 50.0% | |
| GGCAATAGCTCAGTTGGGTT+GGG | - | chr3_1:79142530-79142549 | Msa0378380:CDS | 50.0% | |
| GGAAGCTGTTCACACCATTC+TGG | - | chr3_1:79142671-79142690 | Msa0378380:CDS | 50.0% | |
| GACTGTTTGCATTCCTCAGG+AGG | - | chr3_1:79143885-79143904 | Msa0378380:intron | 50.0% | |
| CTTTGGCAACTGCTAGACCA+AGG | + | chr3_1:79144058-79144077 | None:intergenic | 50.0% | |
| CTAGCAGTTGCCAAAGTTGC+AGG | - | chr3_1:79144062-79144081 | Msa0378380:CDS | 50.0% | |
| ! | TCCTTCAAGGGTAGCCTTAC+AGG | - | chr3_1:79144188-79144207 | Msa0378380:intron | 50.0% |
| TCCTGTAAGGCTACCCTTGA+AGG | + | chr3_1:79144192-79144211 | None:intergenic | 50.0% | |
| TGGGGAACTTTCCAAGCTCT+TGG | - | chr3_1:79144248-79144267 | Msa0378380:intron | 50.0% | |
| AGGCTATGTTGCCAAGAGCT+TGG | + | chr3_1:79144262-79144281 | None:intergenic | 50.0% | |
| CATTTGGAGACACAGCACCA+GGG | - | chr3_1:79144725-79144744 | Msa0378380:intron | 50.0% | |
| AGAAGGGTTGCGCGTATACT+TGG | + | chr3_1:79144834-79144853 | None:intergenic | 50.0% | |
| GAAGGTCTTGCTTTCTTGGG+AGG | - | chr3_1:79145446-79145465 | Msa0378380:intron | 50.0% | |
| CTTGCTTTCTTGGGAGGAAG+TGG | - | chr3_1:79145452-79145471 | Msa0378380:intron | 50.0% | |
| GAGGAAGTGGATGTGAGCAT+AGG | - | chr3_1:79145465-79145484 | Msa0378380:intron | 50.0% | |
| GGGCAATAGCTCAGTTGGGT+TGG | - | chr3_1:79142529-79142548 | Msa0378380:CDS | 55.0% | |
| !! | GCTCAGTTGGGTTGGGTGAT+TGG | - | chr3_1:79142537-79142556 | Msa0378380:CDS | 55.0% |
| GCATTTGGAGACACAGCACC+AGG | - | chr3_1:79144724-79144743 | Msa0378380:intron | 55.0% | |
| GCACCAGGGAACTTACTCAC+TGG | - | chr3_1:79144739-79144758 | Msa0378380:intron | 55.0% | |
| TGTGGCTGTTGTTGGGTCAG+TGG | - | chr3_1:79145176-79145195 | Msa0378380:intron | 55.0% | |
| TGATGAAGCAAGGAGGGGAG+CGG | - | chr3_1:79145574-79145593 | Msa0378380:five_prime_UTR | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 79140985 | 79145610 | 79140985 | ID=Msa0378380;Name=Msa0378380 |
| chr3_1 | mRNA | 79140985 | 79145610 | 79140985 | ID=Msa0378380-mRNA-1;Parent=Msa0378380;Name=Msa0378380-mRNA-1;_AED=0.32;_eAED=0.32;_QI=140|1|1|1|0.62|0.44|9|230|469 |
| chr3_1 | exon | 79140985 | 79141068 | 79140985 | ID=Msa0378380-mRNA-1:exon:19343;Parent=Msa0378380-mRNA-1 |
| chr3_1 | exon | 79141198 | 79141982 | 79141198 | ID=Msa0378380-mRNA-1:exon:19342;Parent=Msa0378380-mRNA-1 |
| chr3_1 | exon | 79142276 | 79142415 | 79142276 | ID=Msa0378380-mRNA-1:exon:19341;Parent=Msa0378380-mRNA-1 |
| chr3_1 | exon | 79142512 | 79142726 | 79142512 | ID=Msa0378380-mRNA-1:exon:19340;Parent=Msa0378380-mRNA-1 |
| chr3_1 | exon | 79143377 | 79143470 | 79143377 | ID=Msa0378380-mRNA-1:exon:19339;Parent=Msa0378380-mRNA-1 |
| chr3_1 | exon | 79143902 | 79144135 | 79143902 | ID=Msa0378380-mRNA-1:exon:19338;Parent=Msa0378380-mRNA-1 |
| chr3_1 | exon | 79144320 | 79144435 | 79144320 | ID=Msa0378380-mRNA-1:exon:19337;Parent=Msa0378380-mRNA-1 |
| chr3_1 | exon | 79144530 | 79144591 | 79144530 | ID=Msa0378380-mRNA-1:exon:19336;Parent=Msa0378380-mRNA-1 |
| chr3_1 | exon | 79145561 | 79145610 | 79145561 | ID=Msa0378380-mRNA-1:exon:19335;Parent=Msa0378380-mRNA-1 |
| chr3_1 | five_prime_UTR | 79145561 | 79145610 | 79145561 | ID=Msa0378380-mRNA-1:five_prime_utr;Parent=Msa0378380-mRNA-1 |
| chr3_1 | five_prime_UTR | 79144530 | 79144591 | 79144530 | ID=Msa0378380-mRNA-1:five_prime_utr;Parent=Msa0378380-mRNA-1 |
| chr3_1 | five_prime_UTR | 79144408 | 79144435 | 79144408 | ID=Msa0378380-mRNA-1:five_prime_utr;Parent=Msa0378380-mRNA-1 |
| chr3_1 | CDS | 79144320 | 79144407 | 79144320 | ID=Msa0378380-mRNA-1:cds;Parent=Msa0378380-mRNA-1 |
| chr3_1 | CDS | 79143902 | 79144135 | 79143902 | ID=Msa0378380-mRNA-1:cds;Parent=Msa0378380-mRNA-1 |
| chr3_1 | CDS | 79143377 | 79143470 | 79143377 | ID=Msa0378380-mRNA-1:cds;Parent=Msa0378380-mRNA-1 |
| chr3_1 | CDS | 79142512 | 79142726 | 79142512 | ID=Msa0378380-mRNA-1:cds;Parent=Msa0378380-mRNA-1 |
| chr3_1 | CDS | 79142276 | 79142415 | 79142276 | ID=Msa0378380-mRNA-1:cds;Parent=Msa0378380-mRNA-1 |
| chr3_1 | CDS | 79141344 | 79141982 | 79141344 | ID=Msa0378380-mRNA-1:cds;Parent=Msa0378380-mRNA-1 |
| chr3_1 | three_prime_UTR | 79141198 | 79141343 | 79141198 | ID=Msa0378380-mRNA-1:three_prime_utr;Parent=Msa0378380-mRNA-1 |
| chr3_1 | three_prime_UTR | 79140985 | 79141068 | 79140985 | ID=Msa0378380-mRNA-1:three_prime_utr;Parent=Msa0378380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
