Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329670 | sp|Q7XJ53|P2C35_ARATH | 68.012 | 347 | 109 | 1 | 1 | 345 | 1 | 347 | 4.13e-173 | 489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329670 | G7JHV5 | 94.987 | 399 | 20 | 0 | 1 | 399 | 1 | 399 | 0.0 | 790 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0022750 | Msa1329670 | -0.828619 | 8.130781e-55 | -8.615850e-47 |
| Msa0027390 | Msa1329670 | 0.840102 | 1.063984e-57 | -8.615850e-47 |
| Msa0039250 | Msa1329670 | 0.816813 | 4.558230e-52 | -8.615850e-47 |
| Msa0043500 | Msa1329670 | 0.807911 | 4.011068e-50 | -8.615850e-47 |
| Msa0045790 | Msa1329670 | 0.803636 | 3.171951e-49 | -8.615850e-47 |
| Msa0048000 | Msa1329670 | 0.811357 | 7.289988e-51 | -8.615850e-47 |
| Msa0054820 | Msa1329670 | 0.814414 | 1.559460e-51 | -8.615850e-47 |
| Msa0055070 | Msa1329670 | 0.822134 | 2.786335e-53 | -8.615850e-47 |
| Msa0064110 | Msa1329670 | 0.813011 | 3.176288e-51 | -8.615850e-47 |
| Msa0068430 | Msa1329670 | 0.811629 | 6.362326e-51 | -8.615850e-47 |
| Msa0077450 | Msa1329670 | 0.821127 | 4.763781e-53 | -8.615850e-47 |
| Msa0092440 | Msa1329670 | 0.831202 | 1.907853e-55 | -8.615850e-47 |
| Msa0096580 | Msa1329670 | 0.805581 | 1.246078e-49 | -8.615850e-47 |
| Msa0100160 | Msa1329670 | 0.815730 | 7.957405e-52 | -8.615850e-47 |
| Msa0101020 | Msa1329670 | 0.817330 | 3.487289e-52 | -8.615850e-47 |
| Msa0608200 | Msa1329670 | 0.807967 | 3.901231e-50 | -8.615850e-47 |
| Msa0615220 | Msa1329670 | 0.806002 | 1.016241e-49 | -8.615850e-47 |
| Msa0626280 | Msa1329670 | 0.831286 | 1.818856e-55 | -8.615850e-47 |
| Msa0629430 | Msa1329670 | 0.801667 | 8.081530e-49 | -8.615850e-47 |
| Msa0675990 | Msa1329670 | 0.821111 | 4.802560e-53 | -8.615850e-47 |
| Msa0679550 | Msa1329670 | 0.802383 | 5.757954e-49 | -8.615850e-47 |
| Msa0687450 | Msa1329670 | 0.810851 | 9.386069e-51 | -8.615850e-47 |
| Msa0689760 | Msa1329670 | 0.808332 | 3.263355e-50 | -8.615850e-47 |
| Msa0691050 | Msa1329670 | 0.824347 | 8.477716e-54 | -8.615850e-47 |
| Msa0693380 | Msa1329670 | 0.820720 | 5.909666e-53 | -8.615850e-47 |
| Msa0715110 | Msa1329670 | 0.801595 | 8.361071e-49 | -8.615850e-47 |
| Msa0716860 | Msa1329670 | 0.808102 | 3.651854e-50 | -8.615850e-47 |
| Msa0756530 | Msa1329670 | 0.807028 | 6.174546e-50 | -8.615850e-47 |
| Msa0757080 | Msa1329670 | 0.809469 | 1.863201e-50 | -8.615850e-47 |
| Msa0757800 | Msa1329670 | 0.809123 | 2.211063e-50 | -8.615850e-47 |
| Msa0828660 | Msa1329670 | 0.802042 | 6.767178e-49 | -8.615850e-47 |
| Msa0829620 | Msa1329670 | 0.804453 | 2.144200e-49 | -8.615850e-47 |
| Msa0122810 | Msa1329670 | 0.824920 | 6.212619e-54 | -8.615850e-47 |
| Msa0123100 | Msa1329670 | 0.803458 | 3.452678e-49 | -8.615850e-47 |
| Msa0123300 | Msa1329670 | 0.806795 | 6.916100e-50 | -8.615850e-47 |
| Msa0124550 | Msa1329670 | 0.802675 | 5.013904e-49 | -8.615850e-47 |
| Msa0133720 | Msa1329670 | 0.822919 | 1.830596e-53 | -8.615850e-47 |
| Msa0133820 | Msa1329670 | 0.815617 | 8.433175e-52 | -8.615850e-47 |
| Msa0138210 | Msa1329670 | 0.806003 | 1.016009e-49 | -8.615850e-47 |
| Msa0143850 | Msa1329670 | 0.805293 | 1.431379e-49 | -8.615850e-47 |
| Msa0144790 | Msa1329670 | 0.820070 | 8.330215e-53 | -8.615850e-47 |
| Msa0145070 | Msa1329670 | 0.807806 | 4.221730e-50 | -8.615850e-47 |
| Msa0145110 | Msa1329670 | 0.803005 | 4.285669e-49 | -8.615850e-47 |
| Msa0159770 | Msa1329670 | 0.805965 | 1.034773e-49 | -8.615850e-47 |
| Msa0160670 | Msa1329670 | 0.818688 | 1.719905e-52 | -8.615850e-47 |
| Msa0165300 | Msa1329670 | 0.848716 | 5.134625e-60 | -8.615850e-47 |
| Msa0170140 | Msa1329670 | 0.820604 | 6.283504e-53 | -8.615850e-47 |
| Msa0178510 | Msa1329670 | 0.807590 | 4.692097e-50 | -8.615850e-47 |
| Msa0181360 | Msa1329670 | 0.804390 | 2.210849e-49 | -8.615850e-47 |
| Msa0191250 | Msa1329670 | 0.803365 | 3.609256e-49 | -8.615850e-47 |
| Msa0227230 | Msa1329670 | 0.828198 | 1.027215e-54 | -8.615850e-47 |
| Msa1224830 | Msa1329670 | 0.800817 | 1.206399e-48 | -8.615850e-47 |
| Msa1227330 | Msa1329670 | 0.804894 | 1.735002e-49 | -8.615850e-47 |
| Msa1286550 | Msa1329670 | 0.852413 | 4.694126e-61 | -8.615850e-47 |
| Msa1288450 | Msa1329670 | 0.825735 | 3.985219e-54 | -8.615850e-47 |
| Msa1306390 | Msa1329670 | 0.803016 | 4.262092e-49 | -8.615850e-47 |
| Msa1307550 | Msa1329670 | 0.824013 | 1.015626e-53 | -8.615850e-47 |
| Msa1317580 | Msa1329670 | 0.812468 | 4.175910e-51 | -8.615850e-47 |
| Msa1329670 | Msa1333730 | 0.811656 | 6.278616e-51 | -8.615850e-47 |
| Msa1329670 | Msa1335710 | 0.801940 | 7.101938e-49 | -8.615850e-47 |
| Msa1329670 | Msa1340040 | -0.801004 | 1.104473e-48 | -8.615850e-47 |
| Msa1329670 | Msa1340810 | 0.818653 | 1.752288e-52 | -8.615850e-47 |
| Msa1329670 | Msa1346750 | 0.817559 | 3.096389e-52 | -8.615850e-47 |
| Msa1329670 | Msa1366300 | 0.822064 | 2.893247e-53 | -8.615850e-47 |
| Msa1329670 | Msa1379850 | 0.841349 | 5.013796e-58 | -8.615850e-47 |
| Msa1329670 | Msa1402270 | 0.802876 | 4.555293e-49 | -8.615850e-47 |
| Msa1329670 | Msa1404540 | 0.812981 | 3.225129e-51 | -8.615850e-47 |
| Msa1329670 | Msa1408760 | -0.807456 | 5.010139e-50 | -8.615850e-47 |
| Msa1329670 | Msa1415940 | 0.834869 | 2.335592e-56 | -8.615850e-47 |
| Msa1329670 | Msa1418260 | 0.802743 | 4.854500e-49 | -8.615850e-47 |
| Msa1329670 | Msa1420250 | 0.806995 | 6.273573e-50 | -8.615850e-47 |
| Msa1329670 | Msa1422840 | 0.816779 | 4.636801e-52 | -8.615850e-47 |
| Msa1329670 | Msa1431060 | 0.820567 | 6.406049e-53 | -8.615850e-47 |
| Msa1329670 | Msa1433220 | 0.829238 | 5.755321e-55 | -8.615850e-47 |
| Msa1329670 | Msa1435400 | 0.829897 | 3.980040e-55 | -8.615850e-47 |
| Msa1329670 | Msa1436480 | 0.803709 | 3.063132e-49 | -8.615850e-47 |
| Msa1329670 | Msa1464290 | 0.805870 | 1.083194e-49 | -8.615850e-47 |
| Msa0378380 | Msa1329670 | 0.813268 | 2.789527e-51 | -8.615850e-47 |
| Msa0388030 | Msa1329670 | -0.816975 | 4.191280e-52 | -8.615850e-47 |
| Msa0392200 | Msa1329670 | 0.845960 | 2.931740e-59 | -8.615850e-47 |
| Msa0410300 | Msa1329670 | 0.816461 | 5.465468e-52 | -8.615850e-47 |
| Msa0417650 | Msa1329670 | 0.811308 | 7.470229e-51 | -8.615850e-47 |
| Msa0417730 | Msa1329670 | 0.801278 | 9.710700e-49 | -8.615850e-47 |
| Msa0422500 | Msa1329670 | 0.816659 | 4.934926e-52 | -8.615850e-47 |
| Msa0427980 | Msa1329670 | 0.804608 | 1.990941e-49 | -8.615850e-47 |
| Msa0436370 | Msa1329670 | 0.839508 | 1.519644e-57 | -8.615850e-47 |
| Msa0445280 | Msa1329670 | 0.813527 | 2.446997e-51 | -8.615850e-47 |
| Msa0450350 | Msa1329670 | 0.820421 | 6.920297e-53 | -8.615850e-47 |
| Msa0461590 | Msa1329670 | 0.817807 | 2.722599e-52 | -8.615850e-47 |
| Msa0464900 | Msa1329670 | 0.818122 | 2.310656e-52 | -8.615850e-47 |
| Msa0468800 | Msa1329670 | 0.804887 | 1.741323e-49 | -8.615850e-47 |
| Msa1010070 | Msa1329670 | 0.819584 | 1.075450e-52 | -8.615850e-47 |
| Msa1021510 | Msa1329670 | 0.824436 | 8.082411e-54 | -8.615850e-47 |
| Msa1033970 | Msa1329670 | 0.805149 | 1.534867e-49 | -8.615850e-47 |
| Msa1035300 | Msa1329670 | 0.803672 | 3.117705e-49 | -8.615850e-47 |
| Msa1037650 | Msa1329670 | -0.805418 | 1.347794e-49 | -8.615850e-47 |
| Msa1056460 | Msa1329670 | 0.820897 | 5.379430e-53 | -8.615850e-47 |
| Msa1070840 | Msa1329670 | 0.800263 | 1.564799e-48 | -8.615850e-47 |
| Msa1080960 | Msa1329670 | 0.802584 | 5.234602e-49 | -8.615850e-47 |
| Msa1105500 | Msa1329670 | 0.814355 | 1.607169e-51 | -8.615850e-47 |
| Msa0260810 | Msa1329670 | 0.813414 | 2.590845e-51 | -8.615850e-47 |
| Msa0264780 | Msa1329670 | 0.817061 | 4.009644e-52 | -8.615850e-47 |
| Msa0269520 | Msa1329670 | 0.839367 | 1.653419e-57 | -8.615850e-47 |
| Msa0276920 | Msa1329670 | 0.813365 | 2.655505e-51 | -8.615850e-47 |
| Msa0281480 | Msa1329670 | 0.801731 | 7.839005e-49 | -8.615850e-47 |
| Msa0299730 | Msa1329670 | 0.818541 | 1.857949e-52 | -8.615850e-47 |
| Msa0314060 | Msa1329670 | 0.800257 | 1.568498e-48 | -8.615850e-47 |
| Msa0317510 | Msa1329670 | 0.809308 | 2.017482e-50 | -8.615850e-47 |
| Msa0317730 | Msa1329670 | 0.810698 | 1.012641e-50 | -8.615850e-47 |
| Msa0317740 | Msa1329670 | 0.822624 | 2.144096e-53 | -8.615850e-47 |
| Msa0346990 | Msa1329670 | 0.836809 | 7.527937e-57 | -8.615850e-47 |
| Msa0347950 | Msa1329670 | 0.816562 | 5.188165e-52 | -8.615850e-47 |
| Msa0347990 | Msa1329670 | 0.822996 | 1.756781e-53 | -8.615850e-47 |
| Msa1118760 | Msa1329670 | 0.818211 | 2.206929e-52 | -8.615850e-47 |
| Msa1135880 | Msa1329670 | 0.800239 | 1.581869e-48 | -8.615850e-47 |
| Msa1152950 | Msa1329670 | 0.801370 | 9.298743e-49 | -8.615850e-47 |
| Msa1158660 | Msa1329670 | 0.822685 | 2.075769e-53 | -8.615850e-47 |
| Msa1162830 | Msa1329670 | 0.801181 | 1.016379e-48 | -8.615850e-47 |
| Msa1179940 | Msa1329670 | 0.814258 | 1.688467e-51 | -8.615850e-47 |
| Msa1179970 | Msa1329670 | 0.813973 | 1.951288e-51 | -8.615850e-47 |
| Msa1205370 | Msa1329670 | 0.820287 | 7.429698e-53 | -8.615850e-47 |
| Msa1216690 | Msa1329670 | 0.922120 | 1.485172e-88 | -8.615850e-47 |
| Msa1216890 | Msa1329670 | 0.916534 | 1.587200e-85 | -8.615850e-47 |
| Msa0484780 | Msa1329670 | 0.826359 | 2.833631e-54 | -8.615850e-47 |
| Msa0487780 | Msa1329670 | 0.818873 | 1.561335e-52 | -8.615850e-47 |
| Msa0510290 | Msa1329670 | 0.811305 | 7.480594e-51 | -8.615850e-47 |
| Msa0511250 | Msa1329670 | 0.811396 | 7.149064e-51 | -8.615850e-47 |
| Msa0512870 | Msa1329670 | 0.848776 | 4.940996e-60 | -8.615850e-47 |
| Msa0516370 | Msa1329670 | 0.801098 | 1.056968e-48 | -8.615850e-47 |
| Msa0518440 | Msa1329670 | 0.803797 | 2.936701e-49 | -8.615850e-47 |
| Msa0547400 | Msa1329670 | 0.806353 | 8.572653e-50 | -8.615850e-47 |
| Msa0567020 | Msa1329670 | 0.801974 | 6.988572e-49 | -8.615850e-47 |
| Msa0572480 | Msa1329670 | 0.818769 | 1.649307e-52 | -8.615850e-47 |
| Msa0573040 | Msa1329670 | 0.800909 | 1.155352e-48 | -8.615850e-47 |
| Msa0576680 | Msa1329670 | 0.806277 | 8.893919e-50 | -8.615850e-47 |
| Msa0587190 | Msa1329670 | 0.802465 | 5.538509e-49 | -8.615850e-47 |
| Msa0598160 | Msa1329670 | 0.808379 | 3.187549e-50 | -8.615850e-47 |
| Msa0849810 | Msa1329670 | 0.807897 | 4.038378e-50 | -8.615850e-47 |
| Msa0861830 | Msa1329670 | 0.804589 | 2.008856e-49 | -8.615850e-47 |
| Msa0873860 | Msa1329670 | 0.828801 | 7.344617e-55 | -8.615850e-47 |
| Msa0893810 | Msa1329670 | 0.811854 | 5.683805e-51 | -8.615850e-47 |
| Msa0900620 | Msa1329670 | 0.812995 | 3.202652e-51 | -8.615850e-47 |
| Msa0929950 | Msa1329670 | 0.811048 | 8.504678e-51 | -8.615850e-47 |
| Msa0939000 | Msa1329670 | 0.819014 | 1.450395e-52 | -8.615850e-47 |
| Msa0959010 | Msa1329670 | 0.811585 | 6.504300e-51 | -8.615850e-47 |
| Msa0961300 | Msa1329670 | 0.804030 | 2.626330e-49 | -8.615850e-47 |
| Msa0975940 | Msa1329670 | 0.836649 | 8.270508e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329670 | MtrunA17_Chr4g0066371 | 94.987 | 399 | 20 | 0 | 1 | 399 | 1 | 399 | 0.0 | 790 |
| Msa1329670 | MtrunA17_Chr2g0286951 | 68.983 | 403 | 119 | 4 | 1 | 399 | 1 | 401 | 0.0 | 551 |
| Msa1329670 | MtrunA17_Chr6g0486661 | 60.542 | 332 | 125 | 3 | 15 | 343 | 56 | 384 | 1.09e-133 | 409 |
| Msa1329670 | MtrunA17_Chr7g0243571 | 27.707 | 314 | 163 | 6 | 46 | 323 | 60 | 345 | 3.14e-31 | 123 |
| Msa1329670 | MtrunA17_Chr1g0192421 | 29.391 | 279 | 156 | 6 | 68 | 323 | 71 | 331 | 1.68e-30 | 120 |
| Msa1329670 | MtrunA17_Chr7g0221691 | 30.976 | 297 | 143 | 6 | 68 | 322 | 111 | 387 | 2.71e-30 | 121 |
| Msa1329670 | MtrunA17_Chr4g0004971 | 28.070 | 285 | 160 | 6 | 68 | 325 | 60 | 326 | 2.75e-30 | 119 |
| Msa1329670 | MtrunA17_Chr2g0295401 | 28.972 | 321 | 171 | 9 | 44 | 336 | 58 | 349 | 3.35e-29 | 116 |
| Msa1329670 | MtrunA17_Chr1g0150451 | 32.090 | 268 | 139 | 10 | 84 | 350 | 106 | 331 | 4.67e-29 | 115 |
| Msa1329670 | MtrunA17_Chr3g0136711 | 30.671 | 313 | 164 | 13 | 44 | 350 | 28 | 293 | 4.89e-29 | 114 |
| Msa1329670 | MtrunA17_Chr7g0249421 | 26.374 | 364 | 190 | 8 | 68 | 371 | 78 | 423 | 1.05e-28 | 117 |
| Msa1329670 | MtrunA17_Chr7g0272061 | 26.885 | 305 | 171 | 6 | 68 | 338 | 73 | 359 | 7.81e-28 | 113 |
| Msa1329670 | MtrunA17_Chr4g0067711 | 28.114 | 281 | 159 | 6 | 68 | 324 | 73 | 334 | 3.81e-27 | 110 |
| Msa1329670 | MtrunA17_Chr2g0324061 | 27.244 | 312 | 171 | 7 | 68 | 342 | 73 | 365 | 3.86e-27 | 112 |
| Msa1329670 | MtrunA17_Chr1g0151781 | 28.125 | 256 | 143 | 6 | 68 | 301 | 51 | 287 | 8.45e-27 | 109 |
| Msa1329670 | MtrunA17_Chr8g0342431 | 26.994 | 326 | 160 | 9 | 68 | 338 | 68 | 370 | 9.74e-27 | 110 |
| Msa1329670 | MtrunA17_Chr3g0105351 | 28.472 | 288 | 148 | 12 | 66 | 341 | 74 | 315 | 2.33e-26 | 107 |
| Msa1329670 | MtrunA17_Chr3g0105371 | 28.571 | 287 | 149 | 12 | 66 | 341 | 98 | 339 | 7.79e-26 | 107 |
| Msa1329670 | MtrunA17_Chr4g0022171 | 26.332 | 319 | 178 | 7 | 68 | 348 | 79 | 378 | 1.61e-25 | 107 |
| Msa1329670 | MtrunA17_Chr1g0212961 | 30.682 | 264 | 139 | 11 | 76 | 339 | 117 | 336 | 1.78e-25 | 105 |
| Msa1329670 | MtrunA17_Chr5g0430481 | 29.181 | 281 | 149 | 12 | 69 | 341 | 137 | 375 | 2.29e-25 | 106 |
| Msa1329670 | MtrunA17_Chr2g0317021 | 28.623 | 276 | 152 | 10 | 69 | 341 | 100 | 333 | 1.60e-24 | 103 |
| Msa1329670 | MtrunA17_Chr3g0126511 | 29.304 | 273 | 152 | 9 | 69 | 340 | 108 | 340 | 2.56e-24 | 103 |
| Msa1329670 | MtrunA17_Chr4g0065141 | 31.599 | 269 | 128 | 12 | 84 | 338 | 122 | 348 | 1.03e-23 | 101 |
| Msa1329670 | MtrunA17_Chr5g0407161 | 28.626 | 262 | 136 | 10 | 86 | 338 | 124 | 343 | 3.15e-22 | 97.4 |
| Msa1329670 | MtrunA17_Chr1g0150781 | 25.610 | 328 | 163 | 12 | 49 | 341 | 263 | 544 | 1.48e-20 | 93.6 |
| Msa1329670 | MtrunA17_Chr2g0293811 | 27.957 | 279 | 140 | 9 | 86 | 345 | 100 | 336 | 1.76e-20 | 92.0 |
| Msa1329670 | MtrunA17_Chr5g0426141 | 25.298 | 336 | 194 | 13 | 7 | 341 | 3 | 282 | 2.83e-20 | 90.1 |
| Msa1329670 | MtrunA17_Chr4g0051661 | 30.233 | 258 | 136 | 13 | 83 | 338 | 180 | 395 | 3.82e-19 | 88.6 |
| Msa1329670 | MtrunA17_Chr4g0070871 | 28.270 | 237 | 119 | 8 | 82 | 304 | 249 | 448 | 5.69e-19 | 88.6 |
| Msa1329670 | MtrunA17_Chr8g0360351 | 27.451 | 255 | 144 | 9 | 86 | 339 | 66 | 280 | 1.13e-18 | 85.5 |
| Msa1329670 | MtrunA17_Chr1g0194191 | 28.369 | 282 | 141 | 11 | 86 | 348 | 118 | 357 | 1.35e-18 | 86.7 |
| Msa1329670 | MtrunA17_Chr3g0138281 | 28.679 | 265 | 135 | 10 | 86 | 338 | 121 | 343 | 4.05e-18 | 85.5 |
| Msa1329670 | MtrunA17_Chr3g0112291 | 28.340 | 247 | 125 | 10 | 69 | 298 | 106 | 317 | 5.81e-18 | 84.7 |
| Msa1329670 | MtrunA17_Chr8g0389921 | 26.007 | 273 | 154 | 8 | 84 | 341 | 196 | 435 | 1.44e-17 | 84.3 |
| Msa1329670 | MtrunA17_Chr5g0396731 | 28.761 | 226 | 116 | 6 | 86 | 301 | 107 | 297 | 3.49e-16 | 79.3 |
| Msa1329670 | MtrunA17_Chr3g0144111 | 27.481 | 262 | 118 | 10 | 86 | 338 | 27 | 225 | 8.33e-16 | 77.0 |
| Msa1329670 | MtrunA17_Chr1g0171571 | 27.972 | 286 | 158 | 11 | 69 | 344 | 401 | 648 | 1.06e-14 | 75.9 |
| Msa1329670 | MtrunA17_Chr1g0185141 | 27.778 | 252 | 104 | 9 | 147 | 349 | 225 | 447 | 5.07e-14 | 73.9 |
| Msa1329670 | MtrunA17_Chr5g0435721 | 29.046 | 241 | 112 | 13 | 85 | 304 | 222 | 424 | 2.28e-13 | 71.6 |
| Msa1329670 | MtrunA17_Chr7g0225501 | 27.519 | 258 | 136 | 12 | 59 | 296 | 54 | 280 | 4.60e-12 | 67.4 |
| Msa1329670 | MtrunA17_Chr1g0209451 | 27.703 | 296 | 152 | 14 | 66 | 340 | 43 | 297 | 5.10e-12 | 67.0 |
| Msa1329670 | MtrunA17_Chr7g0271971 | 27.946 | 297 | 154 | 14 | 64 | 340 | 41 | 297 | 6.48e-12 | 66.6 |
| Msa1329670 | MtrunA17_Chr1g0192471 | 28.571 | 308 | 148 | 17 | 59 | 340 | 36 | 297 | 1.09e-11 | 66.2 |
| Msa1329670 | MtrunA17_Chr1g0175381 | 26.190 | 252 | 140 | 11 | 86 | 313 | 79 | 308 | 4.81e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329670 | AT3G06270.1 | 68.012 | 347 | 109 | 1 | 1 | 345 | 1 | 347 | 4.19e-174 | 489 |
| Msa1329670 | AT2G20050.1 | 63.323 | 319 | 113 | 1 | 40 | 354 | 97 | 415 | 1.88e-138 | 422 |
| Msa1329670 | AT2G20050.2 | 63.323 | 319 | 113 | 1 | 40 | 354 | 97 | 415 | 2.09e-138 | 422 |
| Msa1329670 | AT5G27930.1 | 27.609 | 297 | 171 | 6 | 68 | 338 | 74 | 352 | 2.70e-31 | 123 |
| Msa1329670 | AT5G27930.2 | 27.609 | 297 | 171 | 6 | 68 | 338 | 74 | 352 | 2.70e-31 | 123 |
| Msa1329670 | AT5G26010.1 | 32.479 | 234 | 128 | 5 | 80 | 301 | 67 | 282 | 3.37e-31 | 122 |
| Msa1329670 | AT5G10740.1 | 32.155 | 283 | 149 | 10 | 60 | 339 | 36 | 278 | 9.09e-30 | 118 |
| Msa1329670 | AT5G10740.2 | 32.155 | 283 | 149 | 10 | 60 | 339 | 36 | 278 | 9.09e-30 | 118 |
| Msa1329670 | AT5G36250.1 | 27.327 | 333 | 174 | 7 | 68 | 350 | 80 | 394 | 9.30e-30 | 120 |
| Msa1329670 | AT3G05640.2 | 30.182 | 275 | 156 | 6 | 68 | 324 | 75 | 331 | 1.64e-29 | 117 |
| Msa1329670 | AT3G05640.1 | 30.182 | 275 | 156 | 6 | 68 | 324 | 75 | 331 | 1.64e-29 | 117 |
| Msa1329670 | AT3G05640.3 | 30.182 | 275 | 156 | 6 | 68 | 324 | 75 | 331 | 1.64e-29 | 117 |
| Msa1329670 | AT4G31750.2 | 31.907 | 257 | 134 | 9 | 84 | 339 | 62 | 278 | 2.96e-29 | 115 |
| Msa1329670 | AT4G31750.1 | 31.907 | 257 | 134 | 9 | 84 | 339 | 62 | 278 | 4.33e-29 | 115 |
| Msa1329670 | AT4G31750.3 | 31.907 | 257 | 134 | 9 | 84 | 339 | 62 | 278 | 4.33e-29 | 115 |
| Msa1329670 | AT4G03415.1 | 27.187 | 320 | 175 | 8 | 68 | 348 | 80 | 380 | 1.13e-28 | 117 |
| Msa1329670 | AT4G03415.3 | 27.187 | 320 | 175 | 8 | 68 | 348 | 80 | 380 | 1.13e-28 | 117 |
| Msa1329670 | AT4G03415.2 | 27.187 | 320 | 175 | 8 | 68 | 348 | 80 | 380 | 1.13e-28 | 117 |
| Msa1329670 | AT4G32950.1 | 31.298 | 262 | 152 | 8 | 88 | 340 | 74 | 316 | 2.04e-28 | 114 |
| Msa1329670 | AT5G24940.1 | 32.443 | 262 | 126 | 10 | 84 | 339 | 62 | 278 | 8.78e-28 | 114 |
| Msa1329670 | AT5G01700.1 | 26.403 | 303 | 168 | 6 | 68 | 340 | 11 | 288 | 2.14e-27 | 111 |
| Msa1329670 | AT5G01700.2 | 26.403 | 303 | 168 | 6 | 68 | 340 | 60 | 337 | 3.21e-27 | 112 |
| Msa1329670 | AT1G03590.1 | 27.974 | 311 | 169 | 8 | 68 | 342 | 73 | 364 | 7.30e-27 | 112 |
| Msa1329670 | AT5G36250.2 | 26.225 | 347 | 174 | 8 | 68 | 350 | 80 | 408 | 1.65e-26 | 110 |
| Msa1329670 | AT5G27930.3 | 29.457 | 258 | 138 | 6 | 68 | 299 | 74 | 313 | 2.08e-26 | 108 |
| Msa1329670 | AT1G78200.1 | 29.492 | 295 | 164 | 13 | 49 | 341 | 31 | 283 | 7.52e-26 | 106 |
| Msa1329670 | AT1G78200.3 | 29.492 | 295 | 164 | 13 | 49 | 341 | 31 | 283 | 7.52e-26 | 106 |
| Msa1329670 | AT1G78200.2 | 29.492 | 295 | 164 | 13 | 49 | 341 | 31 | 283 | 7.52e-26 | 106 |
| Msa1329670 | AT1G16220.1 | 26.048 | 334 | 181 | 7 | 68 | 356 | 77 | 389 | 1.89e-25 | 108 |
| Msa1329670 | AT3G16800.2 | 27.931 | 290 | 172 | 6 | 68 | 338 | 75 | 346 | 2.51e-25 | 105 |
| Msa1329670 | AT3G16800.1 | 27.931 | 290 | 172 | 6 | 68 | 338 | 75 | 346 | 2.51e-25 | 105 |
| Msa1329670 | AT3G16800.3 | 27.931 | 290 | 172 | 6 | 68 | 338 | 75 | 346 | 2.51e-25 | 105 |
| Msa1329670 | AT1G78200.5 | 30.597 | 268 | 145 | 12 | 76 | 341 | 10 | 238 | 1.48e-24 | 101 |
| Msa1329670 | AT1G78200.4 | 30.597 | 268 | 145 | 12 | 76 | 341 | 10 | 238 | 1.48e-24 | 101 |
| Msa1329670 | AT3G02750.2 | 29.091 | 275 | 164 | 7 | 110 | 379 | 177 | 425 | 1.50e-24 | 105 |
| Msa1329670 | AT3G02750.1 | 29.091 | 275 | 164 | 7 | 110 | 379 | 177 | 425 | 1.50e-24 | 105 |
| Msa1329670 | AT5G36250.3 | 28.519 | 270 | 127 | 6 | 68 | 289 | 80 | 331 | 3.15e-24 | 102 |
| Msa1329670 | AT5G53140.1 | 27.007 | 274 | 159 | 9 | 69 | 341 | 115 | 348 | 5.46e-24 | 103 |
| Msa1329670 | AT5G53140.2 | 27.007 | 274 | 159 | 9 | 69 | 341 | 115 | 348 | 5.46e-24 | 103 |
| Msa1329670 | AT3G51470.2 | 29.252 | 294 | 153 | 13 | 58 | 338 | 30 | 281 | 7.36e-24 | 101 |
| Msa1329670 | AT3G51470.1 | 29.252 | 294 | 153 | 13 | 58 | 338 | 74 | 325 | 1.51e-23 | 101 |
| Msa1329670 | AT4G32950.2 | 34.450 | 209 | 111 | 7 | 88 | 289 | 74 | 263 | 3.53e-23 | 98.6 |
| Msa1329670 | AT3G16800.4 | 27.881 | 269 | 157 | 6 | 89 | 338 | 1 | 251 | 5.12e-23 | 97.8 |
| Msa1329670 | AT3G16800.6 | 27.881 | 269 | 157 | 6 | 89 | 338 | 1 | 251 | 5.12e-23 | 97.8 |
| Msa1329670 | AT1G07160.1 | 28.470 | 281 | 152 | 9 | 69 | 340 | 136 | 376 | 5.53e-23 | 99.8 |
| Msa1329670 | AT1G79630.2 | 30.000 | 200 | 119 | 4 | 142 | 338 | 146 | 327 | 1.87e-22 | 99.0 |
| Msa1329670 | AT1G79630.7 | 30.000 | 200 | 119 | 4 | 142 | 338 | 146 | 327 | 1.87e-22 | 99.0 |
| Msa1329670 | AT1G79630.1 | 30.000 | 200 | 119 | 4 | 142 | 338 | 216 | 397 | 2.04e-22 | 99.4 |
| Msa1329670 | AT1G79630.8 | 30.000 | 200 | 119 | 4 | 142 | 338 | 212 | 393 | 2.26e-22 | 99.4 |
| Msa1329670 | AT1G79630.6 | 30.000 | 200 | 119 | 4 | 142 | 338 | 106 | 287 | 2.29e-22 | 98.2 |
| Msa1329670 | AT1G79630.3 | 30.000 | 200 | 119 | 4 | 142 | 338 | 106 | 287 | 2.29e-22 | 98.2 |
| Msa1329670 | AT1G79630.4 | 30.000 | 200 | 119 | 4 | 142 | 338 | 106 | 287 | 2.29e-22 | 98.2 |
| Msa1329670 | AT1G79630.5 | 30.000 | 200 | 119 | 4 | 142 | 338 | 106 | 287 | 2.29e-22 | 98.2 |
| Msa1329670 | AT1G43900.1 | 28.467 | 274 | 154 | 9 | 69 | 341 | 137 | 369 | 6.14e-22 | 96.7 |
| Msa1329670 | AT5G57050.2 | 26.471 | 306 | 152 | 10 | 81 | 350 | 113 | 381 | 3.03e-19 | 89.0 |
| Msa1329670 | AT5G57050.1 | 26.471 | 306 | 152 | 10 | 81 | 350 | 153 | 421 | 3.80e-19 | 89.0 |
| Msa1329670 | AT1G34750.2 | 26.966 | 267 | 153 | 11 | 76 | 341 | 57 | 282 | 4.07e-19 | 87.0 |
| Msa1329670 | AT1G34750.1 | 26.966 | 267 | 153 | 11 | 76 | 341 | 57 | 282 | 4.07e-19 | 87.0 |
| Msa1329670 | AT1G34750.3 | 26.966 | 267 | 153 | 11 | 76 | 341 | 57 | 282 | 4.07e-19 | 87.0 |
| Msa1329670 | AT2G40180.1 | 30.855 | 269 | 130 | 13 | 86 | 341 | 161 | 386 | 4.21e-19 | 88.6 |
| Msa1329670 | AT3G02750.3 | 28.188 | 298 | 172 | 10 | 110 | 379 | 177 | 460 | 5.81e-19 | 89.4 |
| Msa1329670 | AT1G48040.1 | 26.909 | 275 | 136 | 9 | 86 | 338 | 116 | 347 | 7.91e-19 | 87.8 |
| Msa1329670 | AT2G25620.1 | 27.941 | 272 | 138 | 10 | 86 | 341 | 128 | 357 | 1.35e-18 | 87.4 |
| Msa1329670 | AT2G25620.2 | 27.941 | 272 | 138 | 10 | 86 | 341 | 128 | 357 | 1.35e-18 | 87.4 |
| Msa1329670 | AT2G20630.1 | 26.538 | 260 | 150 | 9 | 83 | 341 | 60 | 279 | 1.99e-18 | 85.1 |
| Msa1329670 | AT3G15260.2 | 27.132 | 258 | 145 | 9 | 86 | 341 | 73 | 289 | 2.67e-18 | 85.1 |
| Msa1329670 | AT3G15260.1 | 27.132 | 258 | 145 | 9 | 86 | 341 | 73 | 289 | 2.67e-18 | 85.1 |
| Msa1329670 | AT2G30020.1 | 27.972 | 286 | 148 | 11 | 69 | 341 | 153 | 393 | 2.93e-18 | 86.3 |
| Msa1329670 | AT2G33700.1 | 27.099 | 262 | 140 | 9 | 86 | 338 | 123 | 342 | 5.92e-18 | 85.1 |
| Msa1329670 | AT1G72770.4 | 26.557 | 305 | 139 | 11 | 85 | 342 | 237 | 503 | 9.04e-18 | 85.5 |
| Msa1329670 | AT1G72770.1 | 26.557 | 305 | 139 | 11 | 85 | 342 | 237 | 503 | 9.04e-18 | 85.5 |
| Msa1329670 | AT1G72770.3 | 26.557 | 305 | 139 | 11 | 85 | 342 | 237 | 503 | 9.04e-18 | 85.5 |
| Msa1329670 | AT1G22280.1 | 24.068 | 295 | 179 | 11 | 48 | 341 | 31 | 281 | 9.33e-18 | 83.2 |
| Msa1329670 | AT4G28400.3 | 27.059 | 255 | 145 | 9 | 86 | 339 | 45 | 259 | 1.24e-17 | 82.4 |
| Msa1329670 | AT2G20630.2 | 26.562 | 256 | 147 | 9 | 83 | 337 | 60 | 275 | 1.38e-17 | 82.8 |
| Msa1329670 | AT4G28400.1 | 27.059 | 255 | 145 | 9 | 86 | 339 | 67 | 281 | 1.64e-17 | 82.4 |
| Msa1329670 | AT5G51760.2 | 29.412 | 255 | 118 | 8 | 75 | 302 | 103 | 322 | 6.08e-17 | 82.4 |
| Msa1329670 | AT5G51760.1 | 29.412 | 255 | 118 | 8 | 75 | 302 | 133 | 352 | 6.40e-17 | 82.4 |
| Msa1329670 | AT3G17250.1 | 26.619 | 278 | 139 | 10 | 84 | 338 | 156 | 391 | 8.01e-17 | 82.0 |
| Msa1329670 | AT1G09160.2 | 31.788 | 302 | 146 | 19 | 59 | 340 | 36 | 297 | 6.49e-16 | 79.3 |
| Msa1329670 | AT1G09160.1 | 31.788 | 302 | 146 | 19 | 59 | 340 | 36 | 297 | 6.49e-16 | 79.3 |
| Msa1329670 | AT1G22280.3 | 23.920 | 301 | 178 | 12 | 48 | 341 | 31 | 287 | 7.51e-16 | 77.8 |
| Msa1329670 | AT2G34740.1 | 25.000 | 272 | 161 | 10 | 69 | 338 | 102 | 332 | 7.56e-16 | 78.6 |
| Msa1329670 | AT2G29380.1 | 25.952 | 289 | 144 | 13 | 85 | 341 | 111 | 361 | 8.53e-15 | 75.5 |
| Msa1329670 | AT1G68410.4 | 30.743 | 296 | 143 | 17 | 66 | 340 | 48 | 302 | 2.02e-13 | 72.0 |
| Msa1329670 | AT1G68410.3 | 30.743 | 296 | 143 | 17 | 66 | 340 | 48 | 302 | 2.02e-13 | 72.0 |
| Msa1329670 | AT1G68410.1 | 30.743 | 296 | 143 | 17 | 66 | 340 | 48 | 302 | 2.02e-13 | 72.0 |
| Msa1329670 | AT1G68410.2 | 30.743 | 296 | 143 | 17 | 66 | 340 | 48 | 302 | 2.02e-13 | 72.0 |
| Msa1329670 | AT3G11410.1 | 27.347 | 245 | 117 | 11 | 83 | 302 | 134 | 342 | 4.73e-13 | 70.5 |
| Msa1329670 | AT2G34740.2 | 26.222 | 225 | 128 | 9 | 69 | 291 | 116 | 304 | 1.01e-12 | 68.9 |
| Msa1329670 | AT2G34740.3 | 26.222 | 225 | 128 | 9 | 69 | 291 | 98 | 286 | 1.11e-12 | 68.6 |
| Msa1329670 | AT5G57050.3 | 33.333 | 144 | 73 | 6 | 81 | 209 | 153 | 288 | 1.45e-11 | 65.5 |
| Msa1329670 | AT5G02760.1 | 25.397 | 315 | 145 | 14 | 81 | 340 | 65 | 344 | 1.57e-11 | 65.9 |
| Msa1329670 | AT1G72770.2 | 31.373 | 153 | 71 | 6 | 85 | 209 | 237 | 383 | 2.94e-11 | 65.1 |
| Msa1329670 | AT1G72770.5 | 31.373 | 153 | 71 | 6 | 85 | 209 | 237 | 383 | 2.94e-11 | 65.1 |
| Msa1329670 | AT1G47380.1 | 26.174 | 298 | 172 | 13 | 66 | 349 | 39 | 302 | 6.53e-11 | 64.3 |
| Msa1329670 | AT1G34750.4 | 26.728 | 217 | 122 | 10 | 76 | 291 | 57 | 237 | 9.18e-11 | 62.4 |
Find 145 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTAGAAACTGTTTGATTT+TGG | 0.169277 | 8_4:+48378918 | None:intergenic |
| TCTCCAGGTGAGATTCTTTA+TGG | 0.170664 | 8_4:+48375473 | None:intergenic |
| TTTACCGGTCACTATATATT+TGG | 0.177630 | 8_4:-48375663 | Msa1329670:three_prime_UTR |
| TTGACTCTTCCTTCTTCATT+AGG | 0.181058 | 8_4:-48379086 | Msa1329670:five_prime_UTR |
| ATTATCATTGTCCAGATTAA+AGG | 0.182707 | 8_4:-48376606 | Msa1329670:CDS |
| CAAGTTGACGTGAAGAATTT+TGG | 0.184990 | 8_4:+48379113 | None:intergenic |
| AATTTCAAAAGGATCAAATT+TGG | 0.225220 | 8_4:-48378718 | Msa1329670:five_prime_UTR |
| TTACCCCAGTGTTGGATATT+TGG | 0.226477 | 8_4:+48377911 | None:intergenic |
| ACAGGATCCTTCACCAATTC+AGG | 0.227180 | 8_4:+48378223 | None:intergenic |
| CCTCTGTTTCTCTTCTTTGA+AGG | 0.244340 | 8_4:-48379050 | Msa1329670:five_prime_UTR |
| TGACTCTTCCTTCTTCATTA+GGG | 0.259340 | 8_4:-48379085 | Msa1329670:five_prime_UTR |
| CTGCATTTACAAGGAGTTTA+GGG | 0.266150 | 8_4:-48377826 | Msa1329670:CDS |
| TTGGGGTGACTTTGAGAAAA+AGG | 0.273728 | 8_4:+48378937 | None:intergenic |
| AGCTTACAATTCTGCGTTCT+CGG | 0.277270 | 8_4:-48378197 | Msa1329670:CDS |
| CATTGCTCCTGTACATTTAC+CGG | 0.278853 | 8_4:-48375678 | Msa1329670:three_prime_UTR |
| AACCCGAATATCCATTTCTT+TGG | 0.294164 | 8_4:-48378328 | Msa1329670:CDS |
| ACTGCATTTACAAGGAGTTT+AGG | 0.296176 | 8_4:-48377827 | Msa1329670:CDS |
| TTCCCAAATGGGATGTTTCC+TGG | 0.311843 | 8_4:-48377851 | Msa1329670:CDS |
| TCCTTCACACAACTTTGTTT+TGG | 0.323600 | 8_4:-48378443 | Msa1329670:CDS |
| ACACCAAAGAAATGGATATT+CGG | 0.329115 | 8_4:+48378325 | None:intergenic |
| GAAAATGCAATGAAGGTTCT+AGG | 0.330257 | 8_4:+48378980 | None:intergenic |
| TATTAGAGAGTCCTTTAATC+TGG | 0.331443 | 8_4:+48376595 | None:intergenic |
| TGATCAAGTGGAAGGGATTA+AGG | 0.333034 | 8_4:-48377936 | Msa1329670:CDS |
| CACCAACATTAGCAACATAA+AGG | 0.344783 | 8_4:+48378089 | None:intergenic |
| TTTGATGGGCATGGTCAATT+TGG | 0.349419 | 8_4:-48378301 | Msa1329670:CDS |
| TTCTTTATTGTTGCTAGTGA+TGG | 0.360065 | 8_4:-48377728 | Msa1329670:CDS |
| AAACTTTGTTAGAGATAGTT+TGG | 0.363044 | 8_4:-48378266 | Msa1329670:CDS |
| CACCAAAGAAATGGATATTC+GGG | 0.365530 | 8_4:+48378326 | None:intergenic |
| GAGTCAAATTTGAGCTCAAT+AGG | 0.367013 | 8_4:+48378854 | None:intergenic |
| GTTCCAGGAAACATCCCATT+TGG | 0.370982 | 8_4:+48377848 | None:intergenic |
| CTCCTTGTAAATGCAGTTCC+AGG | 0.374803 | 8_4:+48377833 | None:intergenic |
| ACATTGTAGTCAAGCACATC+TGG | 0.378787 | 8_4:-48376078 | Msa1329670:intron |
| GAGAGCTGTGATAGCTGTTA+AGG | 0.383368 | 8_4:-48378062 | Msa1329670:CDS |
| AAGCCAAACTGTTGTTGATA+TGG | 0.388203 | 8_4:-48377687 | Msa1329670:intron |
| TGAAACATGGGTTGTGTTCA+TGG | 0.388527 | 8_4:-48378574 | Msa1329670:exon |
| ACAATAAAGAAGAGATGATT+AGG | 0.391372 | 8_4:+48377740 | None:intergenic |
| TTGTTTAGCCATACCCTCTC+TGG | 0.391835 | 8_4:-48375517 | Msa1329670:three_prime_UTR |
| TTTGATAGCAACAAACAAAT+GGG | 0.402553 | 8_4:+48378800 | None:intergenic |
| ATTTGATAGCAACAAACAAA+TGG | 0.408534 | 8_4:+48378799 | None:intergenic |
| AAGGAGTTTAGGGGATAGAT+TGG | 0.411034 | 8_4:-48377816 | Msa1329670:CDS |
| GTTATCTAACGACCCTGAAT+TGG | 0.416488 | 8_4:-48378236 | Msa1329670:CDS |
| GAGCTTGTATGTTCTTCCTA+TGG | 0.417871 | 8_4:+48378491 | None:intergenic |
| CGAGATTGTGGTTCCCAAAT+GGG | 0.427237 | 8_4:-48377862 | Msa1329670:CDS |
| TGCAAAAGACTCAGAAAAGT+TGG | 0.428627 | 8_4:+48375699 | None:intergenic |
| TACGAGAGAGTGAAACTTTG+TGG | 0.431653 | 8_4:-48377977 | Msa1329670:CDS |
| CCGAGATTGTGGTTCCCAAA+TGG | 0.432081 | 8_4:-48377863 | Msa1329670:CDS |
| CCTCTGATCAGACACCATTT+CGG | 0.433454 | 8_4:-48378009 | Msa1329670:CDS |
| CAGACAAGAAAATGCAATGA+AGG | 0.437748 | 8_4:+48378973 | None:intergenic |
| CTGAAGAGTCATATAAACTA+TGG | 0.438665 | 8_4:-48376662 | Msa1329670:CDS |
| GCTATTACAGTGCTTGTTGT+TGG | 0.438993 | 8_4:-48378118 | Msa1329670:CDS |
| GAAGAGAAACAGAGGAATGA+AGG | 0.441584 | 8_4:+48379058 | None:intergenic |
| TCCTTGTAGTTTCTCCTAAG+TGG | 0.444679 | 8_4:-48375736 | Msa1329670:three_prime_UTR |
| TTCCAGGAAACATCCCATTT+GGG | 0.447799 | 8_4:+48377849 | None:intergenic |
| TCAACTCATCTTTGACTGGC+AGG | 0.448632 | 8_4:+48375930 | None:intergenic |
| ATACCATATCAACAACAGTT+TGG | 0.450437 | 8_4:+48377684 | None:intergenic |
| ACTATATATTTGGTTGTTCA+AGG | 0.453908 | 8_4:-48375653 | Msa1329670:three_prime_UTR |
| GGGTATGTGGTTCATTGTCT+TGG | 0.457233 | 8_4:-48375625 | Msa1329670:three_prime_UTR |
| AACTGGGTCCTATTGTCATT+CGG | 0.471259 | 8_4:-48375362 | None:intergenic |
| GATAGATTGGCGGAGACAAT+TGG | 0.474209 | 8_4:-48377803 | Msa1329670:CDS |
| CTGGGGTAACGAAGAGAGTT+GGG | 0.475410 | 8_4:-48377897 | Msa1329670:CDS |
| ATGTTGCTGTGTGAAATCTT+TGG | 0.476177 | 8_4:-48378548 | Msa1329670:CDS |
| ACCAACATTAGCAACATAAA+GGG | 0.477778 | 8_4:+48378090 | None:intergenic |
| GAGTGAAACTTTGTGGAGCA+AGG | 0.485633 | 8_4:-48377970 | Msa1329670:CDS |
| ATTTGGTTGTTCAAGGCAGC+CGG | 0.490140 | 8_4:-48375646 | Msa1329670:three_prime_UTR |
| AGTAGTACCTTTCGTGGGGT+GGG | 0.490336 | 8_4:+48379017 | None:intergenic |
| TCGTATTCATCTCTCCGAAA+TGG | 0.490543 | 8_4:+48377995 | None:intergenic |
| ACATGATACCCAATTTCAAA+AGG | 0.491484 | 8_4:-48378729 | Msa1329670:five_prime_UTR |
| GTTCAAGGCAGCCGGGTATG+TGG | 0.491817 | 8_4:-48375638 | Msa1329670:three_prime_UTR |
| TTCCTGGAACTGCATTTACA+AGG | 0.492066 | 8_4:-48377835 | Msa1329670:CDS |
| AATGAGAGAGACAGGAGAAG+TGG | 0.495363 | 8_4:+48379136 | None:intergenic |
| TGCATTAGGACGGAAATTCA+AGG | 0.496046 | 8_4:-48378352 | Msa1329670:CDS |
| AGAGCTGTGATAGCTGTTAA+GGG | 0.499710 | 8_4:-48378061 | Msa1329670:CDS |
| GCAGAATTGTAAGCTCGAAC+AGG | 0.504003 | 8_4:+48378205 | None:intergenic |
| GATGGCGGCTCTAGAAAACT+TGG | 0.504312 | 8_4:-48378526 | Msa1329670:CDS |
| ACACAACCCATGTTTCAAAC+AGG | 0.505574 | 8_4:+48378580 | None:intergenic |
| AGCTGAACTATTGACACCTC+TGG | 0.506076 | 8_4:+48377767 | None:intergenic |
| CAGAAAGTAGAAATTAGAGT+TGG | 0.507926 | 8_4:-48375582 | Msa1329670:three_prime_UTR |
| ACCCTTTATGTTGCTAATGT+TGG | 0.524420 | 8_4:-48378091 | Msa1329670:CDS |
| TTATTCAACTCATCTTTGAC+TGG | 0.527302 | 8_4:+48375926 | None:intergenic |
| CATCTCAGAAGTTCCTGTCC+TGG | 0.530672 | 8_4:+48376014 | None:intergenic |
| TTGAGTGTTGATCAAGTGGA+AGG | 0.530984 | 8_4:-48377944 | Msa1329670:CDS |
| AAGTAGTACCTTTCGTGGGG+TGG | 0.532029 | 8_4:+48379016 | None:intergenic |
| ACTGGGGTAACGAAGAGAGT+TGG | 0.535227 | 8_4:-48377898 | Msa1329670:CDS |
| GTAACCTCGCAGTGTGAGAA+AGG | 0.536584 | 8_4:+48378414 | None:intergenic |
| GTAGTACCTTTCGTGGGGTG+GGG | 0.541925 | 8_4:+48379018 | None:intergenic |
| TGTGATAGCTGTTAAGGGTG+GGG | 0.542620 | 8_4:-48378056 | Msa1329670:CDS |
| AAGGAAAACCCTAATGAAGA+AGG | 0.543390 | 8_4:+48379077 | None:intergenic |
| CCATTTGGGAACCACAATCT+CGG | 0.544156 | 8_4:+48377863 | None:intergenic |
| CTGTGATAGCTGTTAAGGGT+GGG | 0.544181 | 8_4:-48378057 | Msa1329670:CDS |
| TTTGGTTGTTCAAGGCAGCC+GGG | 0.547435 | 8_4:-48375645 | Msa1329670:three_prime_UTR |
| AGTGAAACTTTGTGGAGCAA+GGG | 0.549706 | 8_4:-48377969 | Msa1329670:CDS |
| ATAGTGACCGGTAAATGTAC+AGG | 0.552466 | 8_4:+48375671 | None:intergenic |
| AGGATCCAAATATCCAACAC+TGG | 0.555282 | 8_4:-48377916 | Msa1329670:CDS |
| TGAGTGTTGATCAAGTGGAA+GGG | 0.556319 | 8_4:-48377943 | Msa1329670:CDS |
| GAGTTTAGGGGATAGATTGG+CGG | 0.561902 | 8_4:-48377813 | Msa1329670:CDS |
| TCTCTTCGTTACCCCAGTGT+TGG | 0.563931 | 8_4:+48377903 | None:intergenic |
| ATATCACCTGTTTGAAACAT+GGG | 0.564125 | 8_4:-48378586 | Msa1329670:exon |
| GGATCCAAATATCCAACACT+GGG | 0.565827 | 8_4:-48377915 | Msa1329670:CDS |
| TCTTTACAGGGAACAAAGAG+AGG | 0.567828 | 8_4:-48375783 | Msa1329670:intron |
| GATATCACCTGTTTGAAACA+TGG | 0.568845 | 8_4:-48378587 | Msa1329670:exon |
| CTTTACAGGGAACAAAGAGA+GGG | 0.574860 | 8_4:-48375782 | Msa1329670:intron |
| ACTGCACCCCACCCCACGAA+AGG | 0.577373 | 8_4:-48379024 | Msa1329670:five_prime_UTR |
| GATACAATAAAACATTCTCC+AGG | 0.580533 | 8_4:+48375458 | None:intergenic |
| TTGGTTATCATCATAGCCAT+AGG | 0.581172 | 8_4:-48378507 | Msa1329670:CDS |
| TAATTTCTACTTTCTGAACA+AGG | 0.582956 | 8_4:+48375589 | None:intergenic |
| GGGTGGGGATCGGATTATTG+CGG | 0.585455 | 8_4:-48378041 | Msa1329670:CDS |
| TGCTGTGTGAAATCTTTGGA+TGG | 0.594368 | 8_4:-48378544 | Msa1329670:CDS |
| CCGAAATGGTGTCTGATCAG+AGG | 0.599821 | 8_4:+48378009 | None:intergenic |
| ACAACCAAATATATAGTGAC+CGG | 0.600585 | 8_4:+48375659 | None:intergenic |
| AGTATAGTATAGTATAGCAT+AGG | 0.601271 | 8_4:-48378609 | Msa1329670:five_prime_UTR |
| ACCACTTAGGAGAAACTACA+AGG | 0.602100 | 8_4:+48375735 | None:intergenic |
| CAGGATCCTTCACCAATTCA+GGG | 0.602285 | 8_4:+48378224 | None:intergenic |
| AATTTGGAGTTACAATGCAA+AGG | 0.605004 | 8_4:-48378702 | Msa1329670:five_prime_UTR |
| TTTGCTTATCCAGCGAATCA+GGG | 0.607172 | 8_4:+48378389 | None:intergenic |
| TCCAAAACAAAGTTGTGTGA+AGG | 0.609730 | 8_4:+48378442 | None:intergenic |
| GCTGTGATAGCTGTTAAGGG+TGG | 0.610038 | 8_4:-48378058 | Msa1329670:CDS |
| AAGACAATGAACCACATACC+CGG | 0.610092 | 8_4:+48375627 | None:intergenic |
| CAATTAAGTGAGGTCAATGT+CGG | 0.610601 | 8_4:-48376051 | Msa1329670:CDS |
| TAACGACCCTGAATTGGTGA+AGG | 0.614068 | 8_4:-48378230 | Msa1329670:CDS |
| ATGATAAACATCAAATTCAG+TGG | 0.614811 | 8_4:+48375984 | None:intergenic |
| TGCATTTACAAGGAGTTTAG+GGG | 0.615174 | 8_4:-48377825 | Msa1329670:CDS |
| TTGATAGCAACAAACAAATG+GGG | 0.616102 | 8_4:+48378801 | None:intergenic |
| AGAGTCATATAAACTATGGT+CGG | 0.617426 | 8_4:-48376658 | Msa1329670:CDS |
| AACATAGAAATGTACCACTT+AGG | 0.617985 | 8_4:+48375722 | None:intergenic |
| TCGGTACTGCTATGAGAACC+AGG | 0.619300 | 8_4:-48376032 | Msa1329670:CDS |
| TAGCTGTTAAGGGTGGGGAT+CGG | 0.622651 | 8_4:-48378051 | Msa1329670:CDS |
| ACTGCTATGAGAACCAGGAC+AGG | 0.627745 | 8_4:-48376027 | Msa1329670:CDS |
| AGATCCTCGTGATGCATGTG+CGG | 0.629182 | 8_4:-48376691 | Msa1329670:CDS |
| CCTTCAAAGAAGAGAAACAG+AGG | 0.638989 | 8_4:+48379050 | None:intergenic |
| TAACCATAAAGAATCTCACC+TGG | 0.646025 | 8_4:-48375476 | Msa1329670:three_prime_UTR |
| GACATTGATGATTCTATGAG+TGG | 0.646804 | 8_4:-48378148 | Msa1329670:CDS |
| ATGGTGATCCTCCGAGATTG+TGG | 0.650626 | 8_4:-48377874 | Msa1329670:CDS |
| TGGGGATCGGATTATTGCGG+AGG | 0.654548 | 8_4:-48378038 | Msa1329670:CDS |
| GGTAACGAAGAGAGTTGGGA+TGG | 0.656385 | 8_4:-48377893 | Msa1329670:CDS |
| TGATTCTATGAGTGGTACAA+CGG | 0.665201 | 8_4:-48378140 | Msa1329670:CDS |
| TGTGTGAAATCTTTGGATGG+CGG | 0.665816 | 8_4:-48378541 | Msa1329670:CDS |
| GGAGAAACTACAAGGAGACC+TGG | 0.666616 | 8_4:+48375743 | None:intergenic |
| ATCTGGAGTTCAATTAAGTG+AGG | 0.669700 | 8_4:-48376061 | Msa1329670:CDS |
| TTTACAGGGAACAAAGAGAG+GGG | 0.669983 | 8_4:-48375781 | Msa1329670:intron |
| TGGTGTGGTTGCAACTCCAG+AGG | 0.684152 | 8_4:-48377783 | Msa1329670:CDS |
| TATACCTTTCTCACACTGCG+AGG | 0.685306 | 8_4:-48378418 | Msa1329670:CDS |
| ATAGCCGCACATGCATCACG+AGG | 0.723344 | 8_4:+48376687 | None:intergenic |
| ATTGGCGGAGACAATTGGTG+TGG | 0.737589 | 8_4:-48377798 | Msa1329670:CDS |
| TTTGGGAACCACAATCTCGG+AGG | 0.737719 | 8_4:+48377866 | None:intergenic |
| GATCCAAATATCCAACACTG+GGG | 0.772205 | 8_4:-48377914 | Msa1329670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCAATTATAAAGTAAAAT+TGG | + | chr8_4:48377324-48377343 | None:intergenic | 10.0% |
| !!! | TTTTAGATTTGTATTATTAA+TGG | - | chr8_4:48378032-48378051 | Msa1329670:CDS | 10.0% |
| !!! | CAATATATAATTTCTATTTT+TGG | + | chr8_4:48378183-48378202 | None:intergenic | 10.0% |
| !! | CAAAAATAGAAATTATATAT+TGG | - | chr8_4:48378181-48378200 | Msa1329670:CDS | 10.0% |
| !! | ATTTCTAATAAGTAGATAAT+AGG | + | chr8_4:48377129-48377148 | None:intergenic | 15.0% |
| !! | ATTATAAAGTAAAATTGGAA+TGG | + | chr8_4:48377319-48377338 | None:intergenic | 15.0% |
| !! | AAGTTAATACAAATGATAAA+TGG | + | chr8_4:48377538-48377557 | None:intergenic | 15.0% |
| !!! | TTATCATTTGTATTAACTTT+TGG | - | chr8_4:48377539-48377558 | Msa1329670:intron | 15.0% |
| !!! | TATTTTATATTGTTTGATCA+TGG | - | chr8_4:48378685-48378704 | Msa1329670:five_prime_UTR | 15.0% |
| !!! | AATTTGATCCTTTTGAAATT+GGG | + | chr8_4:48375807-48375826 | None:intergenic | 20.0% |
| !!! | AAATTTGATCCTTTTGAAAT+TGG | + | chr8_4:48375808-48375827 | None:intergenic | 20.0% |
| !! | AATTTCAAAAGGATCAAATT+TGG | - | chr8_4:48375807-48375826 | Msa1329670:intron | 20.0% |
| !! | ATTGAAAAAAACAACTTTAC+AGG | + | chr8_4:48375860-48375879 | None:intergenic | 20.0% |
| !!! | GAAGAAAAATCTTTACATTT+TGG | - | chr8_4:48377003-48377022 | Msa1329670:intron | 20.0% |
| !! | TATATATATATATATCCCCA+TGG | - | chr8_4:48377344-48377363 | Msa1329670:intron | 20.0% |
| !! | ATATATATATATATCCCCAT+GGG | - | chr8_4:48377345-48377364 | Msa1329670:intron | 20.0% |
| !!! | TTTATTTGATTTGATTCTGT+AGG | - | chr8_4:48377798-48377817 | Msa1329670:CDS | 20.0% |
| !!! | CTAAAATTTTAAAACAAGCT+TGG | + | chr8_4:48378018-48378037 | None:intergenic | 20.0% |
| !! | AAAAAAATTCCTAAAGTCTA+TGG | + | chr8_4:48378132-48378151 | None:intergenic | 20.0% |
| !!! | TCAATAAATACTTGCTATTT+GGG | - | chr8_4:48378249-48378268 | Msa1329670:CDS | 20.0% |
| !!! | AAGTAACTAGAATTTTCTTT+TGG | + | chr8_4:48378990-48379009 | None:intergenic | 20.0% |
| !! | AGCAAACAATAATTAAAAAC+TGG | - | chr8_4:48379146-48379165 | Msa1329670:five_prime_UTR | 20.0% |
| !! | GCAAACAATAATTAAAAACT+GGG | - | chr8_4:48379147-48379166 | Msa1329670:five_prime_UTR | 20.0% |
| ! | AAAAAAAAAAGAACCCTAGT+AGG | + | chr8_4:48375642-48375661 | None:intergenic | 25.0% |
| !! | TTTGATAGCAACAAACAAAT+GGG | + | chr8_4:48375728-48375747 | None:intergenic | 25.0% |
| !! | ATTTGATAGCAACAAACAAA+TGG | + | chr8_4:48375729-48375748 | None:intergenic | 25.0% |
| !! | AAGTTGCTAATTTTGTAACT+AGG | - | chr8_4:48375767-48375786 | Msa1329670:three_prime_UTR | 25.0% |
| !! | AGTTGCTAATTTTGTAACTA+GGG | - | chr8_4:48375768-48375787 | Msa1329670:three_prime_UTR | 25.0% |
| ! | AGTATAGTATAGTATAGCAT+AGG | - | chr8_4:48375916-48375935 | Msa1329670:intron | 25.0% |
| !!! | ATTTCTTTGGTGTTTTTGAT+GGG | - | chr8_4:48376210-48376229 | Msa1329670:intron | 25.0% |
| ! | AAACTTTGTTAGAGATAGTT+TGG | - | chr8_4:48376259-48376278 | Msa1329670:intron | 25.0% |
| ! | ACAATAAAGAAGAGATGATT+AGG | + | chr8_4:48376788-48376807 | None:intergenic | 25.0% |
| ! | CTAGAAAAAAAAACTAAGAG+AGG | + | chr8_4:48376876-48376895 | None:intergenic | 25.0% |
| ! | CATTTAGATAATATCATCGT+AGG | - | chr8_4:48377074-48377093 | Msa1329670:intron | 25.0% |
| ! | GCAATTATGTTAATGGTTTA+TGG | - | chr8_4:48377229-48377248 | Msa1329670:intron | 25.0% |
| ! | GTTAATGGTTTATGGTTATT+CGG | - | chr8_4:48377237-48377256 | Msa1329670:intron | 25.0% |
| ! | TATATATATATATCCCCATG+GGG | - | chr8_4:48377346-48377365 | Msa1329670:intron | 25.0% |
| ! | GTAATATACAAACATAGGTT+AGG | - | chr8_4:48377368-48377387 | Msa1329670:intron | 25.0% |
| ! | AATTGTTTGTCACAATCATA+TGG | - | chr8_4:48377467-48377486 | Msa1329670:intron | 25.0% |
| ! | ATTGTTTGTCACAATCATAT+GGG | - | chr8_4:48377468-48377487 | Msa1329670:intron | 25.0% |
| ! | TAACTTCCAATTAAACGAAT+TGG | + | chr8_4:48377616-48377635 | None:intergenic | 25.0% |
| ! | ATTATCATTGTCCAGATTAA+AGG | - | chr8_4:48377919-48377938 | Msa1329670:CDS | 25.0% |
| !! | TAAAAGGAAAATGGTAATGA+AGG | + | chr8_4:48377983-48378002 | None:intergenic | 25.0% |
| ! | AACTACACATAAAAGGAAAA+TGG | + | chr8_4:48377992-48378011 | None:intergenic | 25.0% |
| !!! | GATAATACCTTGTTTTTCAT+GGG | + | chr8_4:48378068-48378087 | None:intergenic | 25.0% |
| !!! | CTCAATAAATACTTGCTATT+TGG | - | chr8_4:48378248-48378267 | Msa1329670:CDS | 25.0% |
| !!! | CAATAAATACTTGCTATTTG+GGG | - | chr8_4:48378250-48378269 | Msa1329670:CDS | 25.0% |
| !! | CTCTACATGTTTTTCTTTTT+GGG | + | chr8_4:48378316-48378335 | None:intergenic | 25.0% |
| ! | ATTTGAATCAACTCATTCAT+TGG | - | chr8_4:48378396-48378415 | Msa1329670:CDS | 25.0% |
| ! | ATGATAAACATCAAATTCAG+TGG | + | chr8_4:48378544-48378563 | None:intergenic | 25.0% |
| ! | ACTATATATTTGGTTGTTCA+AGG | - | chr8_4:48378872-48378891 | Msa1329670:five_prime_UTR | 25.0% |
| ! | TAATTTCTACTTTCTGAACA+AGG | + | chr8_4:48378939-48378958 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTCTTTCCAGAGA+GGG | + | chr8_4:48379024-48379043 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTTCTTTCCAGAG+AGG | + | chr8_4:48379025-48379044 | None:intergenic | 25.0% |
| AAAAAAGTAGTACCTTTCGT+GGG | + | chr8_4:48375516-48375535 | None:intergenic | 30.0% | |
| AAAAAAAGTAGTACCTTTCG+TGG | + | chr8_4:48375517-48375536 | None:intergenic | 30.0% | |
| !! | GTAGAAACTGTTTGATTTTG+GGG | + | chr8_4:48375608-48375627 | None:intergenic | 30.0% |
| !! | GGTAGAAACTGTTTGATTTT+GGG | + | chr8_4:48375609-48375628 | None:intergenic | 30.0% |
| ! | TTGATAGCAACAAACAAATG+GGG | + | chr8_4:48375727-48375746 | None:intergenic | 30.0% |
| ACATGATACCCAATTTCAAA+AGG | - | chr8_4:48375796-48375815 | Msa1329670:intron | 30.0% | |
| ! | AATTTGGAGTTACAATGCAA+AGG | - | chr8_4:48375823-48375842 | Msa1329670:intron | 30.0% |
| ! | ATATCACCTGTTTGAAACAT+GGG | - | chr8_4:48375939-48375958 | Msa1329670:CDS | 30.0% |
| ! | ACCAAGATAGTTTTTGCATT+AGG | - | chr8_4:48376159-48376178 | Msa1329670:intron | 30.0% |
| TCCTAATGCAAAAACTATCT+TGG | + | chr8_4:48376163-48376182 | None:intergenic | 30.0% | |
| ! | AGATAGTTTTTGCATTAGGA+CGG | - | chr8_4:48376163-48376182 | Msa1329670:intron | 30.0% |
| ACACCAAAGAAATGGATATT+CGG | + | chr8_4:48376203-48376222 | None:intergenic | 30.0% | |
| CATCAAAAACACCAAAGAAA+TGG | + | chr8_4:48376211-48376230 | None:intergenic | 30.0% | |
| !!! | CATTTCTTTGGTGTTTTTGA+TGG | - | chr8_4:48376209-48376228 | Msa1329670:intron | 30.0% |
| ACCAACATTAGCAACATAAA+GGG | + | chr8_4:48376438-48376457 | None:intergenic | 30.0% | |
| TTCTTTATTGTTGCTAGTGA+TGG | - | chr8_4:48376797-48376816 | Msa1329670:intron | 30.0% | |
| ATACCATATCAACAACAGTT+TGG | + | chr8_4:48376844-48376863 | None:intergenic | 30.0% | |
| !! | TTACATTTTGGCCACAATTA+TGG | - | chr8_4:48377015-48377034 | Msa1329670:intron | 30.0% |
| GAAATCGTATCATCTATCAA+TGG | - | chr8_4:48377144-48377163 | Msa1329670:intron | 30.0% | |
| !! | AAGACTTTGACTTGAAAATC+AGG | - | chr8_4:48377184-48377203 | Msa1329670:intron | 30.0% |
| TCTGTGTGCAATTATGTTAA+TGG | - | chr8_4:48377222-48377241 | Msa1329670:intron | 30.0% | |
| ATGTTTGTATATTACCCCAT+GGG | + | chr8_4:48377363-48377382 | None:intergenic | 30.0% | |
| TATGTTTGTATATTACCCCA+TGG | + | chr8_4:48377364-48377383 | None:intergenic | 30.0% | |
| ATGGGGTAATATACAAACAT+AGG | - | chr8_4:48377363-48377382 | Msa1329670:intron | 30.0% | |
| ! | TTCCTTGTTTAGCATAACTA+TGG | - | chr8_4:48377391-48377410 | Msa1329670:intron | 30.0% |
| AACCATAGTTATGCTAAACA+AGG | + | chr8_4:48377396-48377415 | None:intergenic | 30.0% | |
| ATAACTATGGTTCATTTACC+AGG | - | chr8_4:48377404-48377423 | Msa1329670:intron | 30.0% | |
| ATTATATTTGCACAACTACC+TGG | + | chr8_4:48377425-48377444 | None:intergenic | 30.0% | |
| CCTAATTAACAGATGGAATT+TGG | + | chr8_4:48377510-48377529 | None:intergenic | 30.0% | |
| CCAAATTCCATCTGTTAATT+AGG | - | chr8_4:48377507-48377526 | Msa1329670:intron | 30.0% | |
| CAATTAAACGAATTGGCAAT+TGG | + | chr8_4:48377609-48377628 | None:intergenic | 30.0% | |
| CAATTGCCAATTCGTTTAAT+TGG | - | chr8_4:48377607-48377626 | Msa1329670:intron | 30.0% | |
| !!! | ACTGTGTAGAATTTTAACTC+TGG | - | chr8_4:48377743-48377762 | Msa1329670:CDS | 30.0% |
| ACATTCATCAAGATATGAAG+GGG | + | chr8_4:48377776-48377795 | None:intergenic | 30.0% | |
| CACATTCATCAAGATATGAA+GGG | + | chr8_4:48377777-48377796 | None:intergenic | 30.0% | |
| ACACATTCATCAAGATATGA+AGG | + | chr8_4:48377778-48377797 | None:intergenic | 30.0% | |
| CTGAAGAGTCATATAAACTA+TGG | - | chr8_4:48377863-48377882 | Msa1329670:CDS | 30.0% | |
| AGAGTCATATAAACTATGGT+CGG | - | chr8_4:48377867-48377886 | Msa1329670:CDS | 30.0% | |
| TATTAGAGAGTCCTTTAATC+TGG | + | chr8_4:48377933-48377952 | None:intergenic | 30.0% | |
| AAGGACTCTCTAATAATGTA+TGG | - | chr8_4:48377938-48377957 | Msa1329670:CDS | 30.0% | |
| TTGGAGAAACTACACATAAA+AGG | + | chr8_4:48377999-48378018 | None:intergenic | 30.0% | |
| TTCTTATCCCATGAAAAACA+AGG | - | chr8_4:48378058-48378077 | Msa1329670:CDS | 30.0% | |
| !!! | GGATAATACCTTGTTTTTCA+TGG | + | chr8_4:48378069-48378088 | None:intergenic | 30.0% |
| ! | AAGGTATTATCCCATCAAAT+GGG | - | chr8_4:48378077-48378096 | Msa1329670:CDS | 30.0% |
| TAATTCACTCCATAGACTTT+AGG | - | chr8_4:48378120-48378139 | Msa1329670:CDS | 30.0% | |
| ! | GCTCTACATGTTTTTCTTTT+TGG | + | chr8_4:48378317-48378336 | None:intergenic | 30.0% |
| CAAAATCAAAATCTTGCTAC+TGG | - | chr8_4:48378363-48378382 | Msa1329670:CDS | 30.0% | |
| TTATTCAACTCATCTTTGAC+TGG | + | chr8_4:48378602-48378621 | None:intergenic | 30.0% | |
| GTAAAGAAAATAGGAGGAAA+AGG | + | chr8_4:48378729-48378748 | None:intergenic | 30.0% | |
| ! | TTTCCTCCTATTTTCTTTAC+AGG | - | chr8_4:48378729-48378748 | Msa1329670:five_prime_UTR | 30.0% |
| ! | TTCCTCCTATTTTCTTTACA+GGG | - | chr8_4:48378730-48378749 | Msa1329670:five_prime_UTR | 30.0% |
| TTGTTCCCTGTAAAGAAAAT+AGG | + | chr8_4:48378738-48378757 | None:intergenic | 30.0% | |
| AACATAGAAATGTACCACTT+AGG | + | chr8_4:48378806-48378825 | None:intergenic | 30.0% | |
| TTTACCGGTCACTATATATT+TGG | - | chr8_4:48378862-48378881 | Msa1329670:five_prime_UTR | 30.0% | |
| ACAACCAAATATATAGTGAC+CGG | + | chr8_4:48378869-48378888 | None:intergenic | 30.0% | |
| CAGAAAGTAGAAATTAGAGT+TGG | - | chr8_4:48378943-48378962 | Msa1329670:five_prime_UTR | 30.0% | |
| GATACAATAAAACATTCTCC+AGG | + | chr8_4:48379070-48379089 | None:intergenic | 30.0% | |
| !!! | AATTTTGGAATGAGAGAGAC+AGG | + | chr8_4:48375400-48375419 | None:intergenic | 35.0% |
| !! | CAAGTTGACGTGAAGAATTT+TGG | + | chr8_4:48375415-48375434 | None:intergenic | 35.0% |
| TTGACTCTTCCTTCTTCATT+AGG | - | chr8_4:48375439-48375458 | Msa1329670:three_prime_UTR | 35.0% | |
| TGACTCTTCCTTCTTCATTA+GGG | - | chr8_4:48375440-48375459 | Msa1329670:three_prime_UTR | 35.0% | |
| AAGGAAAACCCTAATGAAGA+AGG | + | chr8_4:48375451-48375470 | None:intergenic | 35.0% | |
| AAAAAGTAGTACCTTTCGTG+GGG | + | chr8_4:48375515-48375534 | None:intergenic | 35.0% | |
| GAAAATGCAATGAAGGTTCT+AGG | + | chr8_4:48375548-48375567 | None:intergenic | 35.0% | |
| CAGACAAGAAAATGCAATGA+AGG | + | chr8_4:48375555-48375574 | None:intergenic | 35.0% | |
| ! | TTTGAGAAAAAGGTGCAAGT+GGG | + | chr8_4:48375581-48375600 | None:intergenic | 35.0% |
| !! | GGGTAGAAACTGTTTGATTT+TGG | + | chr8_4:48375610-48375629 | None:intergenic | 35.0% |
| !!! | TACCCTTTTTTCTACCTACT+AGG | - | chr8_4:48375625-48375644 | Msa1329670:three_prime_UTR | 35.0% |
| !!! | ACCCTTTTTTCTACCTACTA+GGG | - | chr8_4:48375626-48375645 | Msa1329670:three_prime_UTR | 35.0% |
| ACCCTAGTAGGTAGAAAAAA+GGG | + | chr8_4:48375630-48375649 | None:intergenic | 35.0% | |
| AACCCTAGTAGGTAGAAAAA+AGG | + | chr8_4:48375631-48375650 | None:intergenic | 35.0% | |
| GAGTCAAATTTGAGCTCAAT+AGG | + | chr8_4:48375674-48375693 | None:intergenic | 35.0% | |
| ! | GATATCACCTGTTTGAAACA+TGG | - | chr8_4:48375938-48375957 | Msa1329670:CDS | 35.0% |
| ATGTTGCTGTGTGAAATCTT+TGG | - | chr8_4:48375977-48375996 | Msa1329670:CDS | 35.0% | |
| TTGGTTATCATCATAGCCAT+AGG | - | chr8_4:48376018-48376037 | Msa1329670:CDS | 35.0% | |
| !! | TCCTTCACACAACTTTGTTT+TGG | - | chr8_4:48376082-48376101 | Msa1329670:intron | 35.0% |
| TCCAAAACAAAGTTGTGTGA+AGG | + | chr8_4:48376086-48376105 | None:intergenic | 35.0% | |
| AACCCGAATATCCATTTCTT+TGG | - | chr8_4:48376197-48376216 | Msa1329670:intron | 35.0% | |
| CACCAAAGAAATGGATATTC+GGG | + | chr8_4:48376202-48376221 | None:intergenic | 35.0% | |
| ! | GACATTGATGATTCTATGAG+TGG | - | chr8_4:48376377-48376396 | Msa1329670:intron | 35.0% |
| TGATTCTATGAGTGGTACAA+CGG | - | chr8_4:48376385-48376404 | Msa1329670:intron | 35.0% | |
| ACCCTTTATGTTGCTAATGT+TGG | - | chr8_4:48376434-48376453 | Msa1329670:intron | 35.0% | |
| CACCAACATTAGCAACATAA+AGG | + | chr8_4:48376439-48376458 | None:intergenic | 35.0% | |
| ACTGCATTTACAAGGAGTTT+AGG | - | chr8_4:48376698-48376717 | Msa1329670:CDS | 35.0% | |
| CTGCATTTACAAGGAGTTTA+GGG | - | chr8_4:48376699-48376718 | Msa1329670:CDS | 35.0% | |
| TGCATTTACAAGGAGTTTAG+GGG | - | chr8_4:48376700-48376719 | Msa1329670:CDS | 35.0% | |
| AAGCCAAACTGTTGTTGATA+TGG | - | chr8_4:48376838-48376857 | Msa1329670:intron | 35.0% | |
| GTTGATATTGTGAATGACTG+TGG | - | chr8_4:48376935-48376954 | Msa1329670:intron | 35.0% | |
| ! | TTTGGCCACAATTATGGTTT+TGG | - | chr8_4:48377021-48377040 | Msa1329670:intron | 35.0% |
| AATTGGAATGGTATTTCGCT+TGG | + | chr8_4:48377307-48377326 | None:intergenic | 35.0% | |
| TGTTTGTATATTACCCCATG+GGG | + | chr8_4:48377362-48377381 | None:intergenic | 35.0% | |
| GGATAGACCTAATTAACAGA+TGG | + | chr8_4:48377517-48377536 | None:intergenic | 35.0% | |
| !!! | TGTAGAATTTTAACTCTGGC+AGG | - | chr8_4:48377747-48377766 | Msa1329670:CDS | 35.0% |
| ! | CAAGGTATTATCCCATCAAA+TGG | - | chr8_4:48378076-48378095 | Msa1329670:CDS | 35.0% |
| AGGTATTATCCCATCAAATG+GGG | - | chr8_4:48378078-48378097 | Msa1329670:CDS | 35.0% | |
| AATCCTTAACATGTGTCCTT+AGG | - | chr8_4:48378273-48378292 | Msa1329670:CDS | 35.0% | |
| ATCCTTAACATGTGTCCTTA+GGG | - | chr8_4:48378274-48378293 | Msa1329670:CDS | 35.0% | |
| ! | ATCTGGAGTTCAATTAAGTG+AGG | - | chr8_4:48378464-48378483 | Msa1329670:CDS | 35.0% |
| CAATTAAGTGAGGTCAATGT+CGG | - | chr8_4:48378474-48378493 | Msa1329670:CDS | 35.0% | |
| TTCCCTGTAAAGAAAATAGG+AGG | + | chr8_4:48378735-48378754 | None:intergenic | 35.0% | |
| TGCAAAAGACTCAGAAAAGT+TGG | + | chr8_4:48378829-48378848 | None:intergenic | 35.0% | |
| !!! | TCTTTTGGTTTCATGTGTCT+TGG | + | chr8_4:48378975-48378994 | None:intergenic | 35.0% |
| TAACCATAAAGAATCTCACC+TGG | - | chr8_4:48379049-48379068 | Msa1329670:five_prime_UTR | 35.0% | |
| GAAGAGAAACAGAGGAATGA+AGG | + | chr8_4:48375470-48375489 | None:intergenic | 40.0% | |
| CCTTCAAAGAAGAGAAACAG+AGG | + | chr8_4:48375478-48375497 | None:intergenic | 40.0% | |
| ! | CCTCTGTTTCTCTTCTTTGA+AGG | - | chr8_4:48375475-48375494 | Msa1329670:three_prime_UTR | 40.0% |
| ! | CTTTGAGAAAAAGGTGCAAG+TGG | + | chr8_4:48375582-48375601 | None:intergenic | 40.0% |
| ! | TTGGGGTGACTTTGAGAAAA+AGG | + | chr8_4:48375591-48375610 | None:intergenic | 40.0% |
| ACACAACCCATGTTTCAAAC+AGG | + | chr8_4:48375948-48375967 | None:intergenic | 40.0% | |
| ! | TGAAACATGGGTTGTGTTCA+TGG | - | chr8_4:48375951-48375970 | Msa1329670:CDS | 40.0% |
| TGCTGTGTGAAATCTTTGGA+TGG | - | chr8_4:48375981-48376000 | Msa1329670:CDS | 40.0% | |
| TGTGTGAAATCTTTGGATGG+CGG | - | chr8_4:48375984-48376003 | Msa1329670:CDS | 40.0% | |
| GAGCTTGTATGTTCTTCCTA+TGG | + | chr8_4:48376037-48376056 | None:intergenic | 40.0% | |
| TTTGCTTATCCAGCGAATCA+GGG | + | chr8_4:48376139-48376158 | None:intergenic | 40.0% | |
| ! | TTTTGCTTATCCAGCGAATC+AGG | + | chr8_4:48376140-48376159 | None:intergenic | 40.0% |
| TGCATTAGGACGGAAATTCA+AGG | - | chr8_4:48376173-48376192 | Msa1329670:intron | 40.0% | |
| !!! | TTTGGTGTTTTTGATGGGCA+TGG | - | chr8_4:48376215-48376234 | Msa1329670:intron | 40.0% |
| ! | TTTGATGGGCATGGTCAATT+TGG | - | chr8_4:48376224-48376243 | Msa1329670:intron | 40.0% |
| GTTATCTAACGACCCTGAAT+TGG | - | chr8_4:48376289-48376308 | Msa1329670:intron | 40.0% | |
| AGCTTACAATTCTGCGTTCT+CGG | - | chr8_4:48376328-48376347 | Msa1329670:intron | 40.0% | |
| !! | GCTATTACAGTGCTTGTTGT+TGG | - | chr8_4:48376407-48376426 | Msa1329670:intron | 40.0% |
| AGAGCTGTGATAGCTGTTAA+GGG | - | chr8_4:48376464-48376483 | Msa1329670:intron | 40.0% | |
| TCGTATTCATCTCTCCGAAA+TGG | + | chr8_4:48376533-48376552 | None:intergenic | 40.0% | |
| TACGAGAGAGTGAAACTTTG+TGG | - | chr8_4:48376548-48376567 | Msa1329670:intron | 40.0% | |
| AGTGAAACTTTGTGGAGCAA+GGG | - | chr8_4:48376556-48376575 | Msa1329670:intron | 40.0% | |
| !!! | GGTTTTGAGTGTTGATCAAG+TGG | - | chr8_4:48376577-48376596 | Msa1329670:intron | 40.0% |
| !! | TTGAGTGTTGATCAAGTGGA+AGG | - | chr8_4:48376581-48376600 | Msa1329670:intron | 40.0% |
| !! | TGAGTGTTGATCAAGTGGAA+GGG | - | chr8_4:48376582-48376601 | Msa1329670:intron | 40.0% |
| TGATCAAGTGGAAGGGATTA+AGG | - | chr8_4:48376589-48376608 | Msa1329670:intron | 40.0% | |
| AGGATCCAAATATCCAACAC+TGG | - | chr8_4:48376609-48376628 | Msa1329670:CDS | 40.0% | |
| GGATCCAAATATCCAACACT+GGG | - | chr8_4:48376610-48376629 | Msa1329670:CDS | 40.0% | |
| GATCCAAATATCCAACACTG+GGG | - | chr8_4:48376611-48376630 | Msa1329670:CDS | 40.0% | |
| ! | TTACCCCAGTGTTGGATATT+TGG | + | chr8_4:48376617-48376636 | None:intergenic | 40.0% |
| TTCCAGGAAACATCCCATTT+GGG | + | chr8_4:48376679-48376698 | None:intergenic | 40.0% | |
| TTCCTGGAACTGCATTTACA+AGG | - | chr8_4:48376690-48376709 | Msa1329670:CDS | 40.0% | |
| AAGGAGTTTAGGGGATAGAT+TGG | - | chr8_4:48376709-48376728 | Msa1329670:intron | 40.0% | |
| TTGTGAATGACTGTGGACAA+AGG | - | chr8_4:48376942-48376961 | Msa1329670:intron | 40.0% | |
| TGTCTGATGCTGCCAAATTA+TGG | - | chr8_4:48376965-48376984 | Msa1329670:intron | 40.0% | |
| GCAGTCCAAAACCATAATTG+TGG | + | chr8_4:48377029-48377048 | None:intergenic | 40.0% | |
| !! | TACAGTATTGCAACGGGTTA+GGG | + | chr8_4:48377688-48377707 | None:intergenic | 40.0% |
| AGTGTCTACAGTATTGCAAC+GGG | + | chr8_4:48377694-48377713 | None:intergenic | 40.0% | |
| CAGTGTCTACAGTATTGCAA+CGG | + | chr8_4:48377695-48377714 | None:intergenic | 40.0% | |
| TTCTACACAGTAATGCAGCA+GGG | + | chr8_4:48377734-48377753 | None:intergenic | 40.0% | |
| ATTCTACACAGTAATGCAGC+AGG | + | chr8_4:48377735-48377754 | None:intergenic | 40.0% | |
| ACATTGTAGTCAAGCACATC+TGG | - | chr8_4:48378447-48378466 | Msa1329670:CDS | 40.0% | |
| TCTTTACAGGGAACAAAGAG+AGG | - | chr8_4:48378742-48378761 | Msa1329670:five_prime_UTR | 40.0% | |
| CTTTACAGGGAACAAAGAGA+GGG | - | chr8_4:48378743-48378762 | Msa1329670:five_prime_UTR | 40.0% | |
| TTTACAGGGAACAAAGAGAG+GGG | - | chr8_4:48378744-48378763 | Msa1329670:five_prime_UTR | 40.0% | |
| ! | GAACAAAGAGAGGGGTTTTA+CGG | - | chr8_4:48378752-48378771 | Msa1329670:five_prime_UTR | 40.0% |
| TCCTTGTAGTTTCTCCTAAG+TGG | - | chr8_4:48378789-48378808 | Msa1329670:five_prime_UTR | 40.0% | |
| ACCACTTAGGAGAAACTACA+AGG | + | chr8_4:48378793-48378812 | None:intergenic | 40.0% | |
| CATTGCTCCTGTACATTTAC+CGG | - | chr8_4:48378847-48378866 | Msa1329670:five_prime_UTR | 40.0% | |
| ATAGTGACCGGTAAATGTAC+AGG | + | chr8_4:48378857-48378876 | None:intergenic | 40.0% | |
| AAGACAATGAACCACATACC+CGG | + | chr8_4:48378901-48378920 | None:intergenic | 40.0% | |
| CATTGTCTTGGCAGCAAAAA+TGG | - | chr8_4:48378912-48378931 | Msa1329670:five_prime_UTR | 40.0% | |
| ! | TTTTCTTTCCAGAGAGGGTA+TGG | + | chr8_4:48379019-48379038 | None:intergenic | 40.0% |
| TCTCCAGGTGAGATTCTTTA+TGG | + | chr8_4:48379055-48379074 | None:intergenic | 40.0% | |
| AATGAGAGAGACAGGAGAAG+TGG | + | chr8_4:48375392-48375411 | None:intergenic | 45.0% | |
| TATACCTTTCTCACACTGCG+AGG | - | chr8_4:48376107-48376126 | Msa1329670:intron | 45.0% | |
| TAACGACCCTGAATTGGTGA+AGG | - | chr8_4:48376295-48376314 | Msa1329670:intron | 45.0% | |
| CAGGATCCTTCACCAATTCA+GGG | + | chr8_4:48376304-48376323 | None:intergenic | 45.0% | |
| ACAGGATCCTTCACCAATTC+AGG | + | chr8_4:48376305-48376324 | None:intergenic | 45.0% | |
| GCAGAATTGTAAGCTCGAAC+AGG | + | chr8_4:48376323-48376342 | None:intergenic | 45.0% | |
| GAGAGCTGTGATAGCTGTTA+AGG | - | chr8_4:48376463-48376482 | Msa1329670:intron | 45.0% | |
| CTGTGATAGCTGTTAAGGGT+GGG | - | chr8_4:48376468-48376487 | Msa1329670:intron | 45.0% | |
| TGTGATAGCTGTTAAGGGTG+GGG | - | chr8_4:48376469-48376488 | Msa1329670:intron | 45.0% | |
| CCTCTGATCAGACACCATTT+CGG | - | chr8_4:48376516-48376535 | Msa1329670:intron | 45.0% | |
| GAGTGAAACTTTGTGGAGCA+AGG | - | chr8_4:48376555-48376574 | Msa1329670:intron | 45.0% | |
| CCATTTGGGAACCACAATCT+CGG | + | chr8_4:48376665-48376684 | None:intergenic | 45.0% | |
| CGAGATTGTGGTTCCCAAAT+GGG | - | chr8_4:48376663-48376682 | Msa1329670:CDS | 45.0% | |
| TTCCCAAATGGGATGTTTCC+TGG | - | chr8_4:48376674-48376693 | Msa1329670:CDS | 45.0% | |
| GTTCCAGGAAACATCCCATT+TGG | + | chr8_4:48376680-48376699 | None:intergenic | 45.0% | |
| CTCCTTGTAAATGCAGTTCC+AGG | + | chr8_4:48376695-48376714 | None:intergenic | 45.0% | |
| GAGTTTAGGGGATAGATTGG+CGG | - | chr8_4:48376712-48376731 | Msa1329670:intron | 45.0% | |
| GATAGATTGGCGGAGACAAT+TGG | - | chr8_4:48376722-48376741 | Msa1329670:intron | 45.0% | |
| AGCTGAACTATTGACACCTC+TGG | + | chr8_4:48376761-48376780 | None:intergenic | 45.0% | |
| ATGCTGCCAAATTATGGCTG+TGG | - | chr8_4:48376971-48376990 | Msa1329670:intron | 45.0% | |
| ACCACACCACAGCCATAATT+TGG | + | chr8_4:48376980-48376999 | None:intergenic | 45.0% | |
| ! | CTACAGTATTGCAACGGGTT+AGG | + | chr8_4:48377689-48377708 | None:intergenic | 45.0% |
| TTATCCCATCAAATGGGGTC+AGG | - | chr8_4:48378083-48378102 | Msa1329670:CDS | 45.0% | |
| TATCCCATCAAATGGGGTCA+GGG | - | chr8_4:48378084-48378103 | Msa1329670:CDS | 45.0% | |
| AGCCCTAAGGACACATGTTA+AGG | + | chr8_4:48378279-48378298 | None:intergenic | 45.0% | |
| CAATGCTAACATGAGCCCTA+AGG | + | chr8_4:48378292-48378311 | None:intergenic | 45.0% | |
| CTTAGGGCTCATGTTAGCAT+TGG | - | chr8_4:48378290-48378309 | Msa1329670:CDS | 45.0% | |
| TCAACTCATCTTTGACTGGC+AGG | + | chr8_4:48378598-48378617 | None:intergenic | 45.0% | |
| ATTTGGTTGTTCAAGGCAGC+CGG | - | chr8_4:48378879-48378898 | Msa1329670:five_prime_UTR | 45.0% | |
| GGGTATGTGGTTCATTGTCT+TGG | - | chr8_4:48378900-48378919 | Msa1329670:five_prime_UTR | 45.0% | |
| TTGTTTAGCCATACCCTCTC+TGG | - | chr8_4:48379008-48379027 | Msa1329670:five_prime_UTR | 45.0% | |
| !!! | TAATACATAATTTTTTTTAT+TGG | + | chr8_4:48378160-48378179 | None:intergenic | 5.0% |
| AGTAGTACCTTTCGTGGGGT+GGG | + | chr8_4:48375511-48375530 | None:intergenic | 50.0% | |
| AAGTAGTACCTTTCGTGGGG+TGG | + | chr8_4:48375512-48375531 | None:intergenic | 50.0% | |
| !! | GATGGCGGCTCTAGAAAACT+TGG | - | chr8_4:48375999-48376018 | Msa1329670:CDS | 50.0% |
| GTAACCTCGCAGTGTGAGAA+AGG | + | chr8_4:48376114-48376133 | None:intergenic | 50.0% | |
| ! | AGGTTACTACCCTGATTCGC+TGG | - | chr8_4:48376127-48376146 | Msa1329670:intron | 50.0% |
| GCTGTGATAGCTGTTAAGGG+TGG | - | chr8_4:48376467-48376486 | Msa1329670:intron | 50.0% | |
| TAGCTGTTAAGGGTGGGGAT+CGG | - | chr8_4:48376474-48376493 | Msa1329670:intron | 50.0% | |
| CCGAAATGGTGTCTGATCAG+AGG | + | chr8_4:48376519-48376538 | None:intergenic | 50.0% | |
| TCTCTTCGTTACCCCAGTGT+TGG | + | chr8_4:48376625-48376644 | None:intergenic | 50.0% | |
| ACTGGGGTAACGAAGAGAGT+TGG | - | chr8_4:48376627-48376646 | Msa1329670:CDS | 50.0% | |
| CTGGGGTAACGAAGAGAGTT+GGG | - | chr8_4:48376628-48376647 | Msa1329670:CDS | 50.0% | |
| GGTAACGAAGAGAGTTGGGA+TGG | - | chr8_4:48376632-48376651 | Msa1329670:CDS | 50.0% | |
| ATGGTGATCCTCCGAGATTG+TGG | - | chr8_4:48376651-48376670 | Msa1329670:CDS | 50.0% | |
| TTTGGGAACCACAATCTCGG+AGG | + | chr8_4:48376662-48376681 | None:intergenic | 50.0% | |
| CCGAGATTGTGGTTCCCAAA+TGG | - | chr8_4:48376662-48376681 | Msa1329670:CDS | 50.0% | |
| ATTGGCGGAGACAATTGGTG+TGG | - | chr8_4:48376727-48376746 | Msa1329670:intron | 50.0% | |
| GCCAAATTATGGCTGTGGTG+TGG | - | chr8_4:48376976-48376995 | Msa1329670:intron | 50.0% | |
| AGATCCTCGTGATGCATGTG+CGG | - | chr8_4:48377834-48377853 | Msa1329670:CDS | 50.0% | |
| ATCCCATCAAATGGGGTCAG+GGG | - | chr8_4:48378085-48378104 | Msa1329670:CDS | 50.0% | |
| TTCCCCTGACCCCATTTGAT+GGG | + | chr8_4:48378090-48378109 | None:intergenic | 50.0% | |
| ATTCCCCTGACCCCATTTGA+TGG | + | chr8_4:48378091-48378110 | None:intergenic | 50.0% | |
| TCGGTACTGCTATGAGAACC+AGG | - | chr8_4:48378493-48378512 | Msa1329670:CDS | 50.0% | |
| ACTGCTATGAGAACCAGGAC+AGG | - | chr8_4:48378498-48378517 | Msa1329670:CDS | 50.0% | |
| CATCTCAGAAGTTCCTGTCC+TGG | + | chr8_4:48378514-48378533 | None:intergenic | 50.0% | |
| GGAGAAACTACAAGGAGACC+TGG | + | chr8_4:48378785-48378804 | None:intergenic | 50.0% | |
| TTTGGTTGTTCAAGGCAGCC+GGG | - | chr8_4:48378880-48378899 | Msa1329670:five_prime_UTR | 50.0% | |
| GTAGTACCTTTCGTGGGGTG+GGG | + | chr8_4:48375510-48375529 | None:intergenic | 55.0% | |
| GGGTGGGGATCGGATTATTG+CGG | - | chr8_4:48376484-48376503 | Msa1329670:intron | 55.0% | |
| TGGGGATCGGATTATTGCGG+AGG | - | chr8_4:48376487-48376506 | Msa1329670:intron | 55.0% | |
| TGGTGTGGTTGCAACTCCAG+AGG | - | chr8_4:48376742-48376761 | Msa1329670:intron | 55.0% | |
| ! | AAACTTGCCCTGCTTGCTGC+TGG | - | chr8_4:48377658-48377677 | Msa1329670:intron | 55.0% |
| ATAGCCGCACATGCATCACG+AGG | + | chr8_4:48377841-48377860 | None:intergenic | 55.0% | |
| ! | GGGTTTTACGGAAGCTCACC+AGG | - | chr8_4:48378764-48378783 | Msa1329670:five_prime_UTR | 55.0% |
| GGGATGACCAGCAGCAAGCA+GGG | + | chr8_4:48377668-48377687 | None:intergenic | 60.0% | |
| AGGGATGACCAGCAGCAAGC+AGG | + | chr8_4:48377669-48377688 | None:intergenic | 60.0% | |
| GTTCAAGGCAGCCGGGTATG+TGG | - | chr8_4:48378887-48378906 | Msa1329670:five_prime_UTR | 60.0% | |
| ACTGCACCCCACCCCACGAA+AGG | - | chr8_4:48375501-48375520 | Msa1329670:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 48375363 | 48379184 | 48375363 | ID=Msa1329670;Name=Msa1329670 |
| chr8_4 | mRNA | 48375363 | 48379184 | 48375363 | ID=Msa1329670-mRNA-1;Parent=Msa1329670;Name=Msa1329670-mRNA-1;_AED=0.03;_eAED=0.03;_QI=594|1|1|1|0.66|0.5|4|438|399 |
| chr8_4 | exon | 48375363 | 48375796 | 48375363 | ID=Msa1329670-mRNA-1:exon:13899;Parent=Msa1329670-mRNA-1 |
| chr8_4 | exon | 48375926 | 48376091 | 48375926 | ID=Msa1329670-mRNA-1:exon:13898;Parent=Msa1329670-mRNA-1 |
| chr8_4 | exon | 48376593 | 48376727 | 48376593 | ID=Msa1329670-mRNA-1:exon:13897;Parent=Msa1329670-mRNA-1 |
| chr8_4 | exon | 48377688 | 48379184 | 48377688 | ID=Msa1329670-mRNA-1:exon:13896;Parent=Msa1329670-mRNA-1 |
| chr8_4 | five_prime_UTR | 48378591 | 48379184 | 48378591 | ID=Msa1329670-mRNA-1:five_prime_utr;Parent=Msa1329670-mRNA-1 |
| chr8_4 | CDS | 48377688 | 48378590 | 48377688 | ID=Msa1329670-mRNA-1:cds;Parent=Msa1329670-mRNA-1 |
| chr8_4 | CDS | 48376593 | 48376727 | 48376593 | ID=Msa1329670-mRNA-1:cds;Parent=Msa1329670-mRNA-1 |
| chr8_4 | CDS | 48375930 | 48376091 | 48375930 | ID=Msa1329670-mRNA-1:cds;Parent=Msa1329670-mRNA-1 |
| chr8_4 | three_prime_UTR | 48375926 | 48375929 | 48375926 | ID=Msa1329670-mRNA-1:three_prime_utr;Parent=Msa1329670-mRNA-1 |
| chr8_4 | three_prime_UTR | 48375363 | 48375796 | 48375363 | ID=Msa1329670-mRNA-1:three_prime_utr;Parent=Msa1329670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
