AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0465910


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0465910 MtrunA17_Chr3g0118671 85.535 318 46 0 1 318 162 479 0.0 587
Msa0465910 MtrunA17_Chr3g0118771 83.962 318 51 0 1 318 177 494 0.0 567
Msa0465910 MtrunA17_Chr3g0118711 81.073 317 60 0 1 317 169 485 0.0 556
Msa0465910 MtrunA17_Chr3g0118691 80.189 318 63 0 1 318 171 488 0.0 549
Msa0465910 MtrunA17_Chr3g0118701 79.560 318 65 0 1 318 171 488 0.0 543
Msa0465910 MtrunA17_Chr3g0118721 84.068 295 47 0 24 318 1 295 0.0 527
Msa0465910 MtrunA17_Chr3g0118751 75.157 318 50 2 1 318 162 450 3.80e-172 485
Msa0465910 MtrunA17_Chr3g0118661 63.208 318 116 1 1 318 169 485 2.56e-146 421
Msa0465910 MtrunA17_Chr5g0426431 55.484 310 133 4 5 313 173 478 3.76e-123 361
Msa0465910 MtrunA17_Chr3g0092641 54.575 306 134 4 9 313 177 478 7.50e-120 353
Msa0465910 MtrunA17_Chr6g0454201 53.398 309 141 2 5 313 176 481 3.83e-119 351
Msa0465910 MtrunA17_Chr3g0078841 51.768 311 148 2 3 313 170 478 2.12e-118 349
Msa0465910 MtrunA17_Chr6g0454401 53.398 309 141 2 5 313 176 481 2.89e-118 349
Msa0465910 MtrunA17_Chr8g0336331 53.055 311 144 2 3 313 169 477 7.09e-117 345
Msa0465910 MtrunA17_Chr5g0426401 51.911 314 144 5 3 313 2 311 1.34e-115 336
Msa0465910 MtrunA17_Chr6g0454331 52.427 309 144 2 5 313 174 479 2.61e-115 342
Msa0465910 MtrunA17_Chr6g0454341 51.118 313 151 2 1 313 168 478 3.41e-115 341
Msa0465910 MtrunA17_Chr6g0454191 51.133 309 148 2 5 313 176 481 1.23e-113 337
Msa0465910 MtrunA17_Chr6g0454321 50.625 320 150 3 1 314 168 485 1.65e-113 342
Msa0465910 MtrunA17_Chr6g0453951 50.485 309 150 2 5 313 222 527 2.89e-112 335
Msa0465910 MtrunA17_Chr6g0454301 52.427 309 145 2 5 313 425 731 3.50e-112 341
Msa0465910 MtrunA17_Chr6g0454301 54.113 231 103 3 83 313 3 230 9.12e-86 272
Msa0465910 MtrunA17_Chr6g0454361 51.780 309 146 2 5 313 176 481 9.45e-112 332
Msa0465910 MtrunA17_Chr6g0454121 50.162 309 151 2 5 313 174 479 1.04e-111 332
Msa0465910 MtrunA17_Chr6g0453961 50.323 310 150 3 5 313 184 490 1.70e-111 332
Msa0465910 MtrunA17_Chr6g0454181 50.162 309 151 2 5 313 175 480 3.30e-111 331
Msa0465910 MtrunA17_Chr6g0454211 52.427 309 144 2 5 313 462 767 7.43e-111 339
Msa0465910 MtrunA17_Chr6g0454211 35.897 312 115 4 1 312 41 267 3.95e-53 186
Msa0465910 MtrunA17_Chr6g0454291 50.809 309 149 2 5 313 172 477 1.04e-110 330
Msa0465910 MtrunA17_Chr6g0454151 50.962 312 148 3 5 316 175 481 1.96e-110 329
Msa0465910 MtrunA17_Chr5g0423981 50.162 309 150 3 6 313 140 445 4.36e-109 324
Msa0465910 MtrunA17_Chr4g0050341 49.839 311 152 3 5 312 181 490 7.18e-109 325
Msa0465910 MtrunA17_Chr6g0454131 48.220 309 157 2 5 313 174 479 8.48e-109 325
Msa0465910 MtrunA17_Chr6g0454261 48.882 313 157 2 1 313 171 480 1.85e-108 324
Msa0465910 MtrunA17_Chr8g0359821 49.838 309 152 2 5 313 173 478 7.68e-108 322
Msa0465910 MtrunA17_Chr6g0452771 47.896 309 158 2 5 313 175 480 2.85e-107 321
Msa0465910 MtrunA17_Chr6g0454271 51.724 290 137 2 24 313 1 287 2.90e-106 311
Msa0465910 MtrunA17_Chr6g0454351 48.544 309 139 3 5 313 177 465 1.39e-105 316
Msa0465910 MtrunA17_Chr6g0454141 47.896 309 158 2 5 313 175 480 2.76e-105 316
Msa0465910 MtrunA17_Chr2g0278711 47.910 311 159 3 5 313 168 477 1.85e-104 313
Msa0465910 MtrunA17_Chr7g0217881 49.169 301 148 3 14 313 166 462 5.57e-103 309
Msa0465910 MtrunA17_Chr6g0454221 54.506 233 104 2 83 315 3 233 1.30e-90 272
Msa0465910 MtrunA17_Chr8g0355011 44.660 309 126 3 5 313 99 362 1.01e-87 267
Msa0465910 MtrunA17_Chr6g0454171 42.173 313 130 5 5 313 45 310 3.98e-84 256
Msa0465910 MtrunA17_Chr6g0454251 48.018 227 115 2 5 231 172 395 3.43e-74 233
Msa0465910 MtrunA17_Chr3g0112771 37.288 295 173 4 21 313 168 452 1.21e-66 216
Msa0465910 MtrunA17_Chr6g0454371 55.814 172 75 1 142 313 1 171 5.51e-66 205
Msa0465910 MtrunA17_Chr5g0412131 36.513 304 187 5 11 312 170 469 1.14e-63 208
Msa0465910 MtrunA17_Chr6g0454231 42.969 256 104 4 59 313 5 219 2.17e-62 205
Msa0465910 MtrunA17_Chr6g0454231 48.485 66 34 0 5 70 412 477 2.92e-13 70.1
Msa0465910 MtrunA17_Chr5g0412101 36.513 304 188 4 11 312 170 470 4.14e-62 204
Msa0465910 MtrunA17_Chr3g0112761 37.584 298 175 6 19 313 161 450 4.23e-61 201
Msa0465910 MtrunA17_Chr5g0412111 35.197 304 189 5 11 312 164 461 1.18e-60 200
Msa0465910 MtrunA17_Chr8g0336261 58.394 137 56 1 142 278 1 136 3.60e-57 181
Msa0465910 MtrunA17_Chr7g0249981 32.635 334 202 7 1 318 146 472 4.60e-57 191
Msa0465910 MtrunA17_Chr4g0032331 35.526 304 175 7 19 317 167 454 7.23e-55 185
Msa0465910 MtrunA17_Chr1g0207931 35.271 258 156 3 62 312 244 497 1.19e-54 186
Msa0465910 MtrunA17_Chr5g0414331 33.758 314 192 6 12 316 151 457 1.76e-54 184
Msa0465910 MtrunA17_Chr1g0207981 31.000 300 192 6 21 313 182 473 4.59e-53 181
Msa0465910 MtrunA17_Chr3g0098111 30.100 299 198 3 27 318 181 475 4.84e-53 181
Msa0465910 MtrunA17_Chr5g0414321 33.333 306 182 5 21 316 162 455 9.83e-53 179
Msa0465910 MtrunA17_Chr6g0453981 44.211 190 103 2 5 194 45 231 3.90e-51 169
Msa0465910 MtrunA17_Chr7g0250001 29.831 295 196 4 24 314 162 449 6.83e-51 174
Msa0465910 MtrunA17_Chr8g0365811 31.544 298 187 6 27 312 665 957 1.17e-50 180
Msa0465910 MtrunA17_Chr8g0365811 31.136 273 171 6 27 287 183 450 2.07e-44 162
Msa0465910 MtrunA17_Chr4g0053321 35.135 259 156 4 66 316 229 483 4.31e-50 173
Msa0465910 MtrunA17_Chr5g0401721 31.715 309 188 9 21 316 177 475 4.66e-50 172
Msa0465910 MtrunA17_Chr1g0207951 29.677 310 201 3 15 318 816 1114 1.45e-49 177
Msa0465910 MtrunA17_Chr1g0207951 31.229 301 177 5 27 315 291 573 2.32e-49 176
Msa0465910 MtrunA17_Chr6g0464921 33.333 297 186 5 21 312 166 455 4.27e-49 170
Msa0465910 MtrunA17_Chr7g0232401 32.667 300 168 8 21 301 172 456 6.71e-49 169
Msa0465910 MtrunA17_Chr4g0053501 32.026 306 191 6 21 316 170 468 3.82e-48 168
Msa0465910 MtrunA17_Chr6g0464871 33.000 300 188 6 21 315 178 469 5.66e-48 167
Msa0465910 MtrunA17_Chr4g0044511 34.737 285 166 7 42 310 222 502 9.21e-48 167
Msa0465910 MtrunA17_Chr6g0464841 33.110 299 177 6 21 309 166 451 2.08e-47 165
Msa0465910 MtrunA17_Chr8g0377921 32.558 301 179 8 30 313 171 464 2.11e-47 165
Msa0465910 MtrunA17_Chr6g0453941 46.821 173 89 2 1 172 93 263 3.39e-47 160
Msa0465910 MtrunA17_Chr1g0207831 30.547 311 185 8 27 318 171 469 1.67e-46 163
Msa0465910 MtrunA17_Chr1g0207971 29.236 301 184 5 27 315 173 456 1.72e-46 163
Msa0465910 MtrunA17_Chr6g0462571 33.663 303 167 8 21 308 174 457 1.89e-46 163
Msa0465910 MtrunA17_Chr1g0207861 30.303 297 188 5 27 312 180 468 2.03e-46 163
Msa0465910 MtrunA17_Chr6g0464881 31.879 298 190 6 21 313 166 455 2.47e-46 162
Msa0465910 MtrunA17_Chr8g0377941 33.446 296 167 8 30 313 185 462 3.11e-46 162
Msa0465910 MtrunA17_Chr8g0373301 32.899 307 171 9 21 308 172 462 3.22e-46 162
Msa0465910 MtrunA17_Chr7g0249961 34.034 238 142 5 83 314 33 261 3.74e-46 157
Msa0465910 MtrunA17_Chr8g0336691 35.185 270 143 6 62 311 1121 1378 4.23e-46 167
Msa0465910 MtrunA17_Chr8g0336691 34.496 258 133 7 62 311 682 911 3.07e-41 153
Msa0465910 MtrunA17_Chr8g0336691 30.225 311 183 6 21 311 176 472 1.00e-39 148
Msa0465910 MtrunA17_Chr1g0161351 29.831 295 192 4 27 312 209 497 4.66e-46 162
Msa0465910 MtrunA17_Chr6g0449931 36.860 293 140 9 39 301 179 456 1.10e-45 161
Msa0465910 MtrunA17_Chr8g0336741 34.304 309 171 7 21 311 176 470 1.34e-45 160
Msa0465910 MtrunA17_Chr6g0464861 32.776 299 178 6 21 309 165 450 4.26e-45 159
Msa0465910 MtrunA17_Chr7g0232411 31.046 306 180 7 21 308 169 461 5.86e-45 159
Msa0465910 MtrunA17_Chr7g0218811 31.429 315 176 9 8 309 159 446 8.18e-45 158
Msa0465910 MtrunA17_Chr7g0218831 34.672 274 151 8 41 309 186 436 1.24e-44 157
Msa0465910 MtrunA17_Chr8g0335141 35.821 268 142 8 62 312 214 468 1.28e-44 158
Msa0465910 MtrunA17_Chr8g0336651 34.926 272 143 6 62 311 983 1242 1.55e-44 162
Msa0465910 MtrunA17_Chr8g0336651 35.075 268 144 6 62 311 208 463 2.05e-42 156
Msa0465910 MtrunA17_Chr8g0336651 31.783 258 136 5 62 311 548 773 1.41e-34 133
Msa0465910 MtrunA17_Chr7g0232391 31.962 316 177 9 14 311 169 464 1.82e-44 157
Msa0465910 MtrunA17_Chr1g0153451 34.177 316 170 10 23 316 171 470 2.31e-44 157
Msa0465910 MtrunA17_Chr8g0336731 34.304 309 171 8 21 311 195 489 3.16e-44 157
Msa0465910 MtrunA17_Chr6g0462551 33.444 302 172 8 21 308 174 460 6.48e-44 156
Msa0465910 MtrunA17_Chr8g0334851 31.746 315 173 9 21 311 172 468 8.45e-44 156
Msa0465910 MtrunA17_Chr7g0218791 34.076 314 167 13 6 305 153 440 1.64e-43 154
Msa0465910 MtrunA17_Chr6g0462541 32.907 313 163 10 24 308 166 459 1.65e-43 155
Msa0465910 MtrunA17_Chr7g0232331 30.945 307 180 8 21 308 169 462 2.46e-43 155
Msa0465910 MtrunA17_Chr7g0265041 34.164 281 161 7 57 317 217 493 2.56e-43 155
Msa0465910 MtrunA17_Chr8g0380531 29.568 301 193 7 21 312 167 457 3.49e-43 154
Msa0465910 MtrunA17_Chr6g0486251 32.971 276 151 7 56 311 202 463 5.63e-43 154
Msa0465910 MtrunA17_Chr6g0486201 32.971 276 151 7 56 311 202 463 5.63e-43 154
Msa0465910 MtrunA17_Chr3g0122001 31.429 315 197 7 15 312 161 473 6.10e-43 157
Msa0465910 MtrunA17_Chr3g0122001 30.892 314 199 7 15 312 641 952 8.54e-43 157
Msa0465910 MtrunA17_Chr7g0218821 31.481 270 159 7 44 309 200 447 6.91e-43 153
Msa0465910 MtrunA17_Chr8g0335161 32.459 305 173 9 29 316 180 468 7.40e-43 153
Msa0465910 MtrunA17_Chr7g0218841 36.481 233 124 7 82 309 224 437 1.38e-42 152
Msa0465910 MtrunA17_Chr3g0121991 30.351 313 202 8 15 312 234 545 1.55e-42 154
Msa0465910 MtrunA17_Chr7g0232311 32.143 308 174 9 21 309 169 460 4.35e-42 151
Msa0465910 MtrunA17_Chr7g0275681 33.333 279 157 7 57 315 214 483 1.10e-41 150
Msa0465910 MtrunA17_Chr8g0339461 32.154 311 175 9 21 308 170 467 1.23e-41 150
Msa0465910 MtrunA17_Chr7g0265141 34.409 279 155 6 57 313 214 486 2.68e-41 149
Msa0465910 MtrunA17_Chr5g0419761 34.069 317 172 12 26 317 186 490 3.67e-41 149
Msa0465910 MtrunA17_Chr8g0347281 33.442 308 173 9 21 311 179 471 3.79e-41 149
Msa0465910 MtrunA17_Chr3g0079731 32.979 282 148 7 58 310 209 478 3.86e-41 149
Msa0465910 MtrunA17_Chr6g0462521 31.475 305 174 7 24 310 161 448 4.90e-41 148
Msa0465910 MtrunA17_Chr5g0442581 31.861 317 171 8 30 318 183 482 5.35e-41 149
Msa0465910 MtrunA17_Chr8g0339601 31.494 308 175 9 16 300 24 318 6.98e-41 145
Msa0465910 MtrunA17_Chr6g0459311 31.835 267 151 6 62 311 218 470 1.08e-40 147
Msa0465910 MtrunA17_Chr6g0462531 31.000 300 176 8 25 310 180 462 1.40e-40 147
Msa0465910 MtrunA17_Chr7g0232341 32.669 251 140 6 62 294 208 447 1.73e-40 147
Msa0465910 MtrunA17_Chr5g0448521 32.986 288 148 10 58 315 198 470 2.03e-40 147
Msa0465910 MtrunA17_Chr4g0072771 29.667 300 183 7 18 312 189 465 6.03e-40 145
Msa0465910 MtrunA17_Chr4g0014061 34.426 305 161 14 27 309 182 469 6.20e-40 145
Msa0465910 MtrunA17_Chr4g0072761 30.565 301 181 6 17 312 175 452 7.99e-40 145
Msa0465910 MtrunA17_Chr8g0347271 32.990 291 165 8 38 311 195 472 8.64e-40 145
Msa0465910 MtrunA17_Chr8g0339631 31.353 303 171 10 21 301 170 457 9.54e-40 145
Msa0465910 MtrunA17_Chr6g0454111 41.104 163 93 2 1 162 23 183 9.78e-40 138
Msa0465910 MtrunA17_Chr7g0249931 28.094 299 202 6 21 314 195 485 1.00e-39 145
Msa0465910 MtrunA17_Chr8g0339451 32.362 309 173 9 16 301 157 452 2.95e-39 144
Msa0465910 MtrunA17_Chr7g0265151 31.271 291 176 8 47 316 200 487 3.06e-39 144
Msa0465910 MtrunA17_Chr5g0442601 31.230 317 171 9 27 315 581 878 1.27e-38 145
Msa0465910 MtrunA17_Chr5g0442601 35.556 180 95 4 85 253 164 333 3.07e-26 109
Msa0465910 MtrunA17_Chr1g0179901 33.213 277 162 9 58 314 222 495 1.34e-38 142
Msa0465910 MtrunA17_Chr8g0334861 28.981 314 183 8 21 311 166 462 2.13e-38 141
Msa0465910 MtrunA17_Chr7g0275511 33.692 279 153 7 53 311 208 474 4.40e-38 140
Msa0465910 MtrunA17_Chr5g0393591 29.433 282 160 4 32 312 192 435 1.27e-37 139
Msa0465910 MtrunA17_Chr5g0431441 29.904 311 188 8 15 314 176 467 1.72e-37 139
Msa0465910 MtrunA17_Chr1g0153461 35.616 219 122 5 117 316 1 219 1.78e-37 133
Msa0465910 MtrunA17_Chr8g0366391 31.402 328 205 8 6 318 164 486 2.24e-37 139
Msa0465910 MtrunA17_Chr5g0432731 29.642 307 185 8 20 314 11 298 2.36e-37 135
Msa0465910 MtrunA17_Chr5g0442541 32.095 296 154 7 48 313 188 466 3.03e-37 138
Msa0465910 MtrunA17_Chr5g0419771 32.234 273 161 6 62 314 246 514 3.27e-37 139
Msa0465910 MtrunA17_Chr5g0442511 29.530 298 163 8 48 315 216 496 5.12e-37 138
Msa0465910 MtrunA17_Chr1g0159551 29.592 294 178 7 24 301 168 448 1.10e-36 137
Msa0465910 MtrunA17_Chr1g0173121 28.975 283 175 6 45 312 191 462 2.11e-36 136
Msa0465910 MtrunA17_Chr7g0265051 32.246 276 160 7 62 316 219 488 2.91e-36 136
Msa0465910 MtrunA17_Chr8g0339441 36.634 202 109 4 119 301 217 418 3.77e-36 135
Msa0465910 MtrunA17_Chr8g0361371 31.502 273 148 9 62 311 213 469 4.18e-36 135
Msa0465910 MtrunA17_Chr5g0442521 30.818 318 173 8 27 315 179 478 4.54e-36 135
Msa0465910 MtrunA17_Chr4g0066221 31.667 300 177 7 34 309 182 477 5.32e-36 135
Msa0465910 MtrunA17_Chr4g0060511 32.381 315 185 10 17 312 182 487 6.32e-36 135
Msa0465910 MtrunA17_Chr4g0044521 32.121 330 174 13 6 310 160 464 1.18e-35 134
Msa0465910 MtrunA17_Chr8g0374901 33.333 276 156 7 58 309 204 475 1.19e-35 134
Msa0465910 MtrunA17_Chr7g0265101 31.769 277 167 8 59 316 217 490 1.26e-35 134
Msa0465910 MtrunA17_Chr5g0403641 31.010 287 155 9 62 317 236 510 1.41e-35 134
Msa0465910 MtrunA17_Chr7g0243931 31.849 292 173 8 42 312 204 490 1.81e-35 134
Msa0465910 MtrunA17_Chr2g0294931 30.903 288 172 7 48 312 198 481 1.91e-35 134
Msa0465910 MtrunA17_Chr8g0374941 33.574 277 154 9 58 309 1143 1414 1.96e-35 136
Msa0465910 MtrunA17_Chr8g0374941 32.184 261 149 8 58 294 670 926 3.91e-31 123
Msa0465910 MtrunA17_Chr8g0374941 31.061 264 152 8 58 296 205 463 3.23e-30 120
Msa0465910 MtrunA17_Chr5g0428081 32.302 291 164 9 48 312 196 479 2.96e-35 133
Msa0465910 MtrunA17_Chr2g0294921 31.507 292 173 7 44 312 343 630 3.50e-35 134
Msa0465910 MtrunA17_Chr8g0350881 33.696 276 155 7 58 309 206 477 3.71e-35 133
Msa0465910 MtrunA17_Chr7g0243801 33.688 282 163 7 49 312 201 476 3.87e-35 133
Msa0465910 MtrunA17_Chr7g0265111 33.212 274 163 7 59 313 244 516 3.92e-35 133
Msa0465910 MtrunA17_Chr5g0442561 28.955 335 185 11 19 315 156 475 6.29e-35 132
Msa0465910 MtrunA17_Chr4g0011051 30.952 294 181 7 39 313 198 488 6.73e-35 132
Msa0465910 MtrunA17_Chr4g0066261 30.070 286 173 7 47 309 197 478 7.45e-35 132
Msa0465910 MtrunA17_Chr8g0374971 31.429 280 164 7 54 309 202 477 8.83e-35 132
Msa0465910 MtrunA17_Chr7g0243771 33.688 282 163 7 49 312 200 475 1.06e-34 132
Msa0465910 MtrunA17_Chr8g0370941 27.586 319 186 7 21 303 170 479 1.11e-34 132
Msa0465910 MtrunA17_Chr8g0374931 30.195 308 184 8 32 312 178 481 1.38e-34 131
Msa0465910 MtrunA17_Chr4g0066201 33.216 283 157 9 56 314 202 476 1.69e-34 131
Msa0465910 MtrunA17_Chr7g0243631 32.131 305 172 11 32 312 193 486 1.81e-34 131
Msa0465910 MtrunA17_Chr5g0429711 31.655 278 158 9 53 316 206 465 1.90e-34 130
Msa0465910 MtrunA17_Chr5g0442491 30.537 298 160 8 48 315 197 477 5.17e-34 129
Msa0465910 MtrunA17_Chr7g0243871 29.429 333 185 10 6 312 164 472 2.03e-33 128
Msa0465910 MtrunA17_Chr4g0066151 30.450 289 173 7 45 309 192 476 3.08e-33 127
Msa0465910 MtrunA17_Chr7g0243851 34.657 277 153 10 58 312 172 442 4.04e-33 127
Msa0465910 MtrunA17_Chr5g0448551 27.820 266 174 5 18 280 168 418 4.90e-33 127
Msa0465910 MtrunA17_Chr7g0243951 30.822 292 175 8 42 312 198 483 7.45e-33 127
Msa0465910 MtrunA17_Chr5g0431361 28.710 310 190 9 14 312 164 453 9.04e-33 126
Msa0465910 MtrunA17_Chr7g0243681 32.215 298 170 11 32 309 191 476 1.01e-32 126
Msa0465910 MtrunA17_Chr8g0334831 31.225 253 127 9 62 283 212 448 1.01e-32 126
Msa0465910 MtrunA17_Chr3g0106251 28.525 305 188 7 18 313 11 294 1.05e-32 123
Msa0465910 MtrunA17_Chr4g0042891 32.836 268 146 8 62 311 213 464 1.32e-32 125
Msa0465910 MtrunA17_Chr4g0044501 31.541 279 162 8 58 318 217 484 1.76e-32 125
Msa0465910 MtrunA17_Chr7g0218311 29.452 292 178 7 44 312 197 483 1.87e-32 125
Msa0465910 MtrunA17_Chr4g0066281 32.000 275 159 7 57 309 195 463 1.93e-32 125
Msa0465910 MtrunA17_Chr5g0440421 27.937 315 205 10 20 314 183 495 2.50e-32 125
Msa0465910 MtrunA17_Chr6g0463851 31.119 286 169 7 48 309 198 479 4.97e-32 124
Msa0465910 MtrunA17_Chr5g0429681 34.831 267 151 11 62 316 248 503 5.47e-32 124
Msa0465910 MtrunA17_Chr7g0235051 31.773 299 178 10 32 311 161 452 7.78e-32 123
Msa0465910 MtrunA17_Chr5g0431401 27.778 306 190 8 18 312 163 448 1.52e-31 122
Msa0465910 MtrunA17_Chr7g0243861 30.137 292 178 8 42 312 201 487 1.67e-31 123
Msa0465910 MtrunA17_Chr6g0463861 30.605 281 165 9 57 312 198 473 1.77e-31 122
Msa0465910 MtrunA17_Chr3g0079711 36.957 184 97 4 146 310 3 186 2.36e-31 116
Msa0465910 MtrunA17_Chr4g0066131 29.643 280 169 6 54 309 196 471 2.74e-31 122
Msa0465910 MtrunA17_Chr5g0401851 29.688 320 177 11 29 312 176 483 2.82e-31 122
Msa0465910 MtrunA17_Chr7g0243711 33.962 212 122 5 118 312 106 316 3.44e-31 119
Msa0465910 MtrunA17_Chr4g0042931 29.054 296 178 9 33 311 182 462 8.20e-31 120
Msa0465910 MtrunA17_Chr5g0431421 27.331 311 187 8 18 313 163 449 2.01e-30 119
Msa0465910 MtrunA17_Chr7g0243781 29.514 288 162 8 47 309 201 472 4.13e-30 119
Msa0465910 MtrunA17_Chr2g0302961 29.766 299 176 7 32 312 183 465 4.99e-30 118
Msa0465910 MtrunA17_Chr3g0106231 26.885 305 197 7 18 313 165 452 9.60e-30 117
Msa0465910 MtrunA17_Chr5g0410941 28.082 292 183 7 44 312 202 489 2.51e-29 117
Msa0465910 MtrunA17_Chr2g0302991 28.523 298 185 6 32 312 176 462 3.51e-29 116
Msa0465910 MtrunA17_Chr2g0294941 27.737 274 171 7 44 294 92 361 6.10e-29 114
Msa0465910 MtrunA17_Chr5g0431371 28.065 310 184 9 18 312 163 448 6.56e-29 115
Msa0465910 MtrunA17_Chr7g0243911 34.975 203 104 6 116 301 18 209 6.95e-29 110
Msa0465910 MtrunA17_Chr5g0420801 27.869 305 190 10 21 312 171 458 1.40e-28 114
Msa0465910 MtrunA17_Chr4g0044481 31.915 235 150 6 24 256 174 400 1.69e-28 114
Msa0465910 MtrunA17_Chr7g0243761 34.343 198 111 4 118 312 273 454 1.76e-28 114
Msa0465910 MtrunA17_Chr1g0207881 37.121 132 77 1 187 312 253 384 1.83e-28 113
Msa0465910 MtrunA17_Chr8g0355221 33.654 208 122 4 121 312 279 486 3.34e-28 114
Msa0465910 MtrunA17_Chr1g0165701 30.000 300 181 10 32 312 194 483 4.60e-28 113
Msa0465910 MtrunA17_Chr5g0427561 55.952 84 37 0 230 313 2 85 5.36e-28 104
Msa0465910 MtrunA17_Chr2g0307961 30.189 265 163 8 58 313 218 469 6.94e-28 112
Msa0465910 MtrunA17_Chr8g0369341 27.124 306 188 10 21 310 180 466 1.33e-27 112
Msa0465910 MtrunA17_Chr8g0382021 29.808 208 130 4 121 312 281 488 1.62e-27 112
Msa0465910 MtrunA17_Chr4g0066171 29.433 282 165 9 56 312 204 476 2.05e-27 111
Msa0465910 MtrunA17_Chr5g0416741 27.517 298 192 7 32 312 193 483 4.29e-27 110
Msa0465910 MtrunA17_Chr8g0361411 28.470 281 182 8 39 312 185 453 4.53e-27 110
Msa0465910 MtrunA17_Chr7g0243611 30.769 260 155 10 24 265 44 296 3.37e-26 105
Msa0465910 MtrunA17_Chr2g0329111 29.730 259 153 9 57 298 213 459 1.05e-25 106
Msa0465910 MtrunA17_Chr6g0482061 28.947 304 193 9 11 300 173 467 5.00e-25 104
Msa0465910 MtrunA17_Chr7g0243811 32.743 226 119 8 47 259 176 381 6.67e-25 103
Msa0465910 MtrunA17_Chr4g0029131 30.645 186 117 4 120 293 255 440 5.95e-24 102
Msa0465910 MtrunA17_Chr1g0196851 31.892 185 114 6 121 293 296 480 6.40e-24 101
Msa0465910 MtrunA17_Chr7g0232351 31.250 224 126 7 21 230 169 378 1.43e-23 99.8
Msa0465910 MtrunA17_Chr5g0416821 27.645 293 188 10 31 312 194 473 2.90e-23 99.8
Msa0465910 MtrunA17_Chr5g0409591 29.134 254 143 9 61 286 212 456 7.21e-23 98.6
Msa0465910 MtrunA17_Chr2g0278721 31.884 207 128 6 90 290 756 955 1.04e-22 99.0
Msa0465910 MtrunA17_Chr2g0278721 28.283 198 120 5 122 318 274 450 6.82e-14 72.4
Msa0465910 MtrunA17_Chr8g0337381 41.935 124 66 2 192 311 3 124 1.13e-22 91.7
Msa0465910 MtrunA17_Chr6g0463891 27.083 288 188 8 43 312 201 484 1.86e-22 97.4
Msa0465910 MtrunA17_Chr7g0241801 32.370 173 105 4 121 289 242 406 4.28e-22 95.9
Msa0465910 MtrunA17_Chr6g0454391 64.062 64 23 0 205 268 11 74 5.17e-22 89.4
Msa0465910 MtrunA17_Chr8g0336321 32.673 202 128 6 90 286 241 439 1.90e-21 94.4
Msa0465910 MtrunA17_Chr4g0029151 30.108 186 118 5 120 293 263 448 2.12e-21 94.4
Msa0465910 MtrunA17_Chr5g0431431 28.405 257 158 7 15 268 110 343 2.24e-21 93.2
Msa0465910 MtrunA17_Chr8g0336251 31.841 201 131 4 90 286 241 439 3.93e-21 93.6
Msa0465910 MtrunA17_Chr4g0040691 27.136 199 137 4 122 313 261 458 7.45e-21 92.8
Msa0465910 MtrunA17_Chr8g0367221 28.063 253 149 9 49 288 1488 1720 1.89e-20 92.4
Msa0465910 MtrunA17_Chr8g0367221 32.653 147 88 4 121 263 270 409 5.77e-18 84.7
Msa0465910 MtrunA17_Chr8g0367221 34.014 147 86 4 121 263 1057 1196 6.45e-18 84.7
Msa0465910 MtrunA17_Chr7g0241781 31.214 173 107 4 121 289 242 406 1.95e-20 91.3
Msa0465910 MtrunA17_Chr2g0283041 27.841 176 119 3 122 289 258 433 5.99e-20 90.1
Msa0465910 MtrunA17_Chr5g0427571 33.918 171 107 5 121 286 104 273 1.06e-19 87.8
Msa0465910 MtrunA17_Chr3g0092031 26.699 206 140 5 117 316 1 201 1.72e-18 82.4
Msa0465910 MtrunA17_Chr7g0231631 28.638 213 140 5 106 312 53 259 2.65e-18 83.2
Msa0465910 MtrunA17_Chr4g0066141 35.570 149 79 4 178 309 200 348 3.41e-18 84.0
Msa0465910 MtrunA17_Chr4g0040711 26.131 199 139 4 122 313 261 458 3.46e-18 84.7
Msa0465910 MtrunA17_Chr2g0319761 28.856 201 133 5 122 313 259 458 4.65e-18 84.3
Msa0465910 MtrunA17_Chr8g0357361 28.019 207 129 6 57 256 59 252 3.48e-17 80.1
Msa0465910 MtrunA17_Chr4g0069611 27.586 174 116 4 122 289 269 438 9.16e-17 80.5
Msa0465910 MtrunA17_Chr6g0454381 38.947 95 58 0 5 99 45 139 8.74e-16 73.2
Msa0465910 MtrunA17_Chr6g0466831 24.757 206 144 5 117 316 267 467 9.24e-16 77.8
Msa0465910 MtrunA17_Chr2g0319731 27.363 201 136 5 122 313 276 475 1.15e-15 77.4
Msa0465910 MtrunA17_Chr8g0336271 50.000 76 38 0 3 78 169 244 1.59e-15 75.5
Msa0465910 MtrunA17_Chr6g0464091 30.714 140 92 3 117 255 274 409 1.99e-15 76.6
Msa0465910 MtrunA17_Chr6g0466841 24.272 206 145 5 117 316 267 467 3.00e-15 76.3
Msa0465910 MtrunA17_Chr2g0319801 30.178 169 109 4 122 281 259 427 6.31e-15 75.1
Msa0465910 MtrunA17_Chr2g0319791 26.238 202 136 6 122 314 259 456 7.93e-15 74.7
Msa0465910 MtrunA17_Chr2g0319751 25.616 203 141 5 122 315 736 937 9.03e-14 72.0
Msa0465910 MtrunA17_Chr2g0319751 25.743 202 116 6 122 314 259 435 2.17e-12 67.8
Msa0465910 MtrunA17_Chr2g0302851 30.769 130 86 2 117 245 265 391 1.18e-13 71.2
Msa0465910 MtrunA17_Chr4g0039881 25.957 235 154 8 63 289 193 415 2.64e-13 70.1
Msa0465910 MtrunA17_Chr2g0278741 26.437 174 118 4 122 289 356 525 9.80e-13 68.6
Msa0465910 MtrunA17_Chr7g0250021 28.395 162 109 3 21 182 167 321 2.48e-12 66.6
Msa0465910 MtrunA17_Chr7g0243731 39.130 69 41 1 189 256 6 74 3.90e-12 61.2
Msa0465910 MtrunA17_Chr4g0029161 24.324 185 102 5 120 293 255 412 2.23e-11 64.3
Msa0465910 MtrunA17_Chr2g0321331 34.737 95 61 1 130 223 94 188 7.51e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0465910 AT1G22380.1 50.645 310 151 2 5 313 173 481 1.76e-113 337
Msa0465910 AT1G22340.1 47.937 315 163 1 3 316 171 485 8.17e-113 335
Msa0465910 AT1G22360.1 48.387 310 158 2 5 313 170 478 3.19e-109 326
Msa0465910 AT1G22400.1 46.624 311 163 3 5 313 173 482 9.85e-107 320
Msa0465910 AT1G22370.1 49.013 304 153 2 11 313 4 306 3.62e-105 310
Msa0465910 AT1G22370.2 49.013 304 153 2 11 313 174 476 8.79e-103 310
Msa0465910 AT1G22360.2 46.129 310 153 3 5 313 170 466 1.31e-100 304
Msa0465910 AT1G78270.1 47.020 302 157 3 14 313 181 481 5.24e-95 290
Msa0465910 AT5G59590.1 37.540 309 172 6 6 309 154 446 3.20e-65 212
Msa0465910 AT3G46680.1 38.111 307 173 7 6 309 154 446 6.46e-62 203
Msa0465910 AT5G59580.1 36.306 314 183 6 6 316 152 451 1.23e-61 203
Msa0465910 AT3G46700.1 36.395 294 168 5 21 310 164 442 5.29e-61 201
Msa0465910 AT3G46690.1 37.419 310 174 6 6 310 153 447 1.30e-60 200
Msa0465910 AT2G36970.1 33.555 301 182 5 18 312 182 470 4.03e-59 197
Msa0465910 AT5G38040.1 36.667 300 164 7 18 310 167 447 5.40e-59 196
Msa0465910 AT3G46660.1 37.413 286 162 5 27 309 181 452 1.58e-58 195
Msa0465910 AT3G46670.1 38.340 253 143 3 59 309 204 445 1.25e-57 192
Msa0465910 AT3G55710.1 37.500 304 174 7 19 317 167 459 2.58e-57 192
Msa0465910 AT5G38010.1 35.906 298 167 6 19 310 172 451 6.91e-57 190
Msa0465910 AT3G46650.1 36.426 291 167 5 21 308 153 428 8.09e-57 190
Msa0465910 AT3G11340.1 37.586 290 165 5 27 313 169 445 1.14e-56 190
Msa0465910 AT3G55700.1 34.936 312 182 6 9 317 162 455 2.45e-56 189
Msa0465910 AT4G15480.1 32.899 307 188 6 14 312 182 478 6.27e-54 184
Msa0465910 AT1G05680.1 36.268 284 169 5 31 309 173 449 7.65e-54 182
Msa0465910 AT5G05890.1 34.899 298 176 7 19 312 169 452 9.76e-54 182
Msa0465910 AT4G15500.1 31.959 291 181 4 31 313 182 463 1.01e-53 182
Msa0465910 AT1G05675.1 34.843 287 169 5 31 309 173 449 1.49e-53 182
Msa0465910 AT3G21560.1 31.561 301 188 6 21 312 181 472 3.74e-53 182
Msa0465910 AT2G31750.1 33.223 301 187 6 21 314 163 456 1.29e-52 179
Msa0465910 AT2G28080.1 36.545 301 172 8 18 313 186 472 1.35e-52 180
Msa0465910 AT2G31750.2 33.223 301 187 6 21 314 163 456 3.72e-52 179
Msa0465910 AT3G46720.1 36.177 293 162 7 21 310 168 438 7.36e-52 177
Msa0465910 AT5G05870.1 32.770 296 188 3 19 312 168 454 7.37e-51 175
Msa0465910 AT5G05880.1 32.886 298 182 7 19 312 165 448 1.69e-50 174
Msa0465910 AT4G01070.1 35.943 281 149 6 40 301 188 456 8.31e-49 170
Msa0465910 AT4G15490.1 31.104 299 183 6 27 313 180 467 9.25e-49 169
Msa0465910 AT5G17040.2 30.719 306 197 3 9 313 47 338 1.17e-48 166
Msa0465910 AT2G26480.1 32.526 289 180 6 28 313 170 446 1.25e-47 166
Msa0465910 AT5G17050.1 29.801 302 195 3 14 314 173 458 2.57e-47 165
Msa0465910 AT5G05860.1 35.316 269 160 4 48 313 191 448 1.44e-46 163
Msa0465910 AT2G43840.1 32.890 301 180 9 24 312 156 446 1.69e-46 163
Msa0465910 AT2G43840.2 32.333 300 183 8 24 312 156 446 1.97e-46 163
Msa0465910 AT2G31790.1 32.667 300 187 5 10 301 153 445 2.65e-46 162
Msa0465910 AT2G23250.1 31.879 298 173 10 27 312 156 435 9.76e-46 160
Msa0465910 AT5G17040.1 30.872 298 191 3 17 313 157 440 1.18e-45 160
Msa0465910 AT2G43820.1 32.881 295 179 8 27 312 162 446 3.27e-45 159
Msa0465910 AT4G14090.1 34.333 300 161 10 27 311 176 454 2.28e-44 157
Msa0465910 AT5G05900.1 30.000 300 186 6 19 314 170 449 2.74e-44 157
Msa0465910 AT5G17030.1 28.477 302 201 3 14 314 170 457 3.43e-43 154
Msa0465910 AT2G23260.1 31.186 295 184 9 27 312 169 453 1.18e-42 153
Msa0465910 AT1G05560.1 30.547 311 193 8 21 318 157 457 1.23e-42 153
Msa0465910 AT1G30530.1 28.664 307 196 4 11 313 164 451 2.20e-42 152
Msa0465910 AT1G05560.2 30.547 311 193 8 21 318 207 507 3.14e-42 153
Msa0465910 AT4G15550.1 30.000 300 178 6 27 311 190 472 1.24e-41 150
Msa0465910 AT1G24100.1 36.150 213 125 3 106 312 251 458 7.34e-41 148
Msa0465910 AT2G15490.3 33.585 265 160 5 59 312 218 477 1.89e-40 147
Msa0465910 AT5G26310.1 30.960 323 170 11 21 311 165 466 2.49e-40 147
Msa0465910 AT4G34131.1 30.945 307 176 9 29 311 184 478 5.44e-40 146
Msa0465910 AT2G15480.1 32.394 284 166 6 45 312 207 480 5.74e-40 146
Msa0465910 AT1G01420.2 32.069 290 167 7 40 311 191 468 5.98e-40 146
Msa0465910 AT1G01420.1 33.582 268 148 7 62 311 210 465 6.82e-40 146
Msa0465910 AT5G66690.1 30.321 343 191 10 4 315 148 473 1.41e-39 145
Msa0465910 AT2G15490.1 33.582 268 159 6 59 312 218 480 2.11e-39 145
Msa0465910 AT3G53160.1 34.296 277 158 8 59 316 215 486 2.65e-39 144
Msa0465910 AT1G01390.2 32.203 295 165 7 38 311 203 483 7.24e-39 143
Msa0465910 AT1G01390.1 32.051 312 175 8 21 311 171 466 7.46e-39 143
Msa0465910 AT2G36750.1 33.910 289 163 8 47 314 204 485 1.05e-38 143
Msa0465910 AT2G15480.2 31.633 294 165 7 45 312 207 490 1.18e-38 143
Msa0465910 AT2G30140.2 31.013 316 177 10 15 316 166 454 1.70e-38 142
Msa0465910 AT2G30140.1 31.013 316 177 10 15 316 167 455 1.90e-38 142
Msa0465910 AT4G36770.1 30.345 290 159 7 35 297 175 448 3.73e-38 141
Msa0465910 AT2G36800.1 33.212 274 161 7 59 314 220 489 4.79e-38 141
Msa0465910 AT2G36780.1 32.653 294 170 8 40 314 206 490 5.10e-38 141
Msa0465910 AT1G05530.1 28.846 312 184 9 24 313 160 455 5.57e-38 140
Msa0465910 AT3G50740.1 29.755 326 177 9 21 314 170 475 8.10e-38 140
Msa0465910 AT2G36760.1 32.000 275 165 7 59 315 221 491 3.38e-37 139
Msa0465910 AT3G16520.3 31.579 304 175 10 21 310 173 457 3.94e-37 138
Msa0465910 AT4G34135.1 32.500 280 169 6 45 311 208 480 5.48e-37 138
Msa0465910 AT2G36770.1 31.469 286 174 7 48 315 210 491 8.01e-37 138
Msa0465910 AT2G18570.1 33.110 299 149 13 40 305 179 459 8.65e-37 137
Msa0465910 AT5G37950.2 36.697 218 114 6 19 230 138 337 1.26e-36 134
Msa0465910 AT5G37950.1 36.697 218 114 6 19 230 144 343 1.49e-36 134
Msa0465910 AT3G02100.1 31.765 255 141 7 62 309 228 456 7.42e-36 135
Msa0465910 AT2G36790.1 32.727 275 161 7 59 314 220 489 1.16e-35 135
Msa0465910 AT2G18560.1 31.438 299 154 11 40 305 89 369 1.66e-35 132
Msa0465910 AT1G10400.1 35.484 279 153 10 43 311 200 461 2.20e-35 134
Msa0465910 AT2G30150.1 29.904 311 186 9 11 312 149 436 6.06e-35 132
Msa0465910 AT3G16520.2 31.579 285 162 10 21 291 173 438 6.40e-35 132
Msa0465910 AT2G30150.2 29.904 311 186 9 11 312 165 452 6.44e-35 132
Msa0465910 AT3G16520.1 31.579 285 162 10 21 291 173 438 6.87e-35 132
Msa0465910 AT5G14860.1 33.217 286 161 10 40 312 207 475 1.76e-34 131
Msa0465910 AT4G15260.1 29.352 293 170 6 48 317 81 359 3.44e-34 128
Msa0465910 AT3G21790.1 31.387 274 153 7 62 312 217 478 1.68e-33 129
Msa0465910 AT2G29710.1 29.368 269 162 7 58 313 210 463 2.04e-33 128
Msa0465910 AT2G29730.1 30.479 292 176 10 32 313 189 463 3.08e-33 127
Msa0465910 AT3G53150.1 29.063 320 191 9 26 315 199 512 8.98e-33 127
Msa0465910 AT3G22250.1 32.243 214 126 7 80 285 239 441 1.30e-32 126
Msa0465910 AT3G21750.1 28.981 314 176 8 30 315 177 471 1.54e-32 126
Msa0465910 AT2G16890.2 31.387 274 157 10 52 312 212 467 2.59e-32 125
Msa0465910 AT3G21760.1 28.526 312 183 9 25 312 185 480 4.37e-32 125
Msa0465910 AT4G34138.1 30.070 286 170 7 44 312 206 478 5.19e-32 124
Msa0465910 AT3G21780.1 29.252 294 170 7 48 317 194 473 3.67e-31 122
Msa0465910 AT3G21800.1 30.714 280 158 7 62 317 213 480 5.75e-31 121
Msa0465910 AT2G29740.1 29.740 269 164 8 53 309 216 471 2.28e-30 120
Msa0465910 AT5G03490.1 29.129 333 195 11 1 311 148 461 3.22e-30 119
Msa0465910 AT4G15280.1 29.412 289 159 9 55 315 205 476 7.07e-30 119
Msa0465910 AT1G07260.1 29.057 265 163 6 62 313 220 472 9.17e-30 118
Msa0465910 AT4G15280.2 29.412 289 159 9 55 315 237 508 1.15e-29 118
Msa0465910 AT1G07250.1 29.213 267 167 5 62 317 222 477 2.89e-29 117
Msa0465910 AT1G07240.1 29.104 268 162 7 62 313 221 476 3.32e-29 117
Msa0465910 AT1G73880.1 26.621 293 197 6 28 313 186 467 7.53e-28 113
Msa0465910 AT2G29750.1 26.882 279 176 8 53 318 216 479 2.59e-27 111
Msa0465910 AT5G12890.1 27.302 315 185 12 29 313 182 482 2.27e-25 106
Msa0465910 AT2G16890.3 30.531 226 127 9 52 265 212 419 1.05e-23 100
Msa0465910 AT1G51210.1 26.298 289 186 8 5 286 163 431 1.91e-23 100
Msa0465910 AT5G65550.1 28.137 263 159 7 59 310 217 460 2.30e-23 100
Msa0465910 AT5G54010.1 28.218 202 137 4 121 315 249 449 3.30e-22 97.1
Msa0465910 AT5G49690.1 31.609 174 105 4 117 284 262 427 5.72e-22 96.3
Msa0465910 AT5G53990.1 35.664 143 87 2 122 263 244 382 8.50e-22 95.5
Msa0465910 AT1G64910.1 35.862 145 88 2 120 263 242 382 7.09e-21 92.8
Msa0465910 AT4G27570.1 28.977 176 118 3 121 289 249 424 6.25e-20 90.1
Msa0465910 AT4G27560.1 26.368 201 140 4 120 313 248 447 3.17e-19 88.2
Msa0465910 AT1G06000.1 25.279 269 176 8 59 312 175 433 6.12e-19 87.4
Msa0465910 AT4G09500.1 27.027 185 128 3 122 299 219 403 1.19e-18 86.3
Msa0465910 AT4G09500.2 27.027 185 128 3 122 299 244 428 1.32e-18 86.3
Msa0465910 AT3G29630.1 32.414 145 93 2 122 265 246 386 4.90e-18 84.7
Msa0465910 AT3G29630.2 32.414 145 93 2 122 265 220 360 4.99e-18 84.7
Msa0465910 AT2G22590.1 30.769 208 127 7 90 288 247 446 5.43e-18 84.7
Msa0465910 AT1G64920.1 27.749 191 127 4 120 299 242 432 2.45e-17 82.8
Msa0465910 AT2G22930.1 24.581 179 128 3 118 289 240 418 3.97e-17 82.0
Msa0465910 AT5G54060.1 28.019 207 134 6 90 288 243 442 8.12e-17 81.3
Msa0465910 AT1G50580.1 32.168 143 92 2 122 263 245 383 4.73e-16 79.0
Msa0465910 AT4G34135.2 35.484 124 73 3 45 166 208 326 1.45e-14 73.9
Msa0465910 AT4G01070.2 30.488 164 88 4 40 189 188 339 2.47e-13 70.1

Find 68 sgRNAs with CRISPR-Local

Find 158 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGCAAATGGTTCAAGTTTA+TGG 0.081901 3_3:+66400605 Msa0465910:CDS
TGATATTATGTTTGATTTCT+TGG 0.169944 3_3:+66400414 Msa0465910:CDS
TTAAAACCATGTTCCTTCTT+AGG 0.170040 3_3:-66400583 None:intergenic
GCACAAAATGGTTGAATAAA+TGG 0.184599 3_3:+66400644 Msa0465910:CDS
AGCTATAGATGCTACTAATT+TGG 0.205470 3_3:+66401158 Msa0465910:CDS
GATGAAAATTTCATTGTTGA+TGG 0.281443 3_3:+66400301 Msa0465910:CDS
CATTGTGATGAAGAACCTTT+TGG 0.286892 3_3:-66401215 None:intergenic
ATGAAGCCCTTGCCGCTCTT+AGG 0.305846 3_3:+66400503 Msa0465910:CDS
TCAGTCCTATATGTTAATTA+TGG 0.315097 3_3:+66400676 Msa0465910:CDS
GGACCAATGCTATATATGTT+TGG 0.319476 3_3:-66400535 None:intergenic
GCTATAGATGCTACTAATTT+GGG 0.327366 3_3:+66401159 Msa0465910:CDS
GACCAATGCTATATATGTTT+GGG 0.332388 3_3:-66400534 None:intergenic
TGCTTGCTCATCCATCAGTT+GGG 0.338073 3_3:+66400890 Msa0465910:CDS
CAAGTGTTCCTACTATTTGT+TGG 0.340717 3_3:+66400962 Msa0465910:CDS
CAGAGCAACAAACAAATTGT+AGG 0.356191 3_3:+66400995 Msa0465910:CDS
CCACTTGAAGGAATTTGCTT+GGG 0.364246 3_3:+66400723 Msa0465910:CDS
CCTTGGATACATGTTTAGAT+TGG 0.369819 3_3:+66400326 Msa0465910:CDS
GATATTATGTTTGATTTCTT+GGG 0.378244 3_3:+66400415 Msa0465910:CDS
TTATGCAACACTTGGAGAAT+AGG 0.381141 3_3:+66401021 Msa0465910:CDS
TCTTCACCCATTACTACATC+TGG 0.391769 3_3:-66400787 None:intergenic
GTGACCTAGAATGCACAAAA+TGG 0.392379 3_3:+66400632 Msa0465910:CDS
ACATGTTTAGATTGGATCTC+TGG 0.419613 3_3:+66400334 Msa0465910:CDS
GGAAATGATGGAAGGAGAAA+AGG 0.424374 3_3:+66401095 Msa0465910:CDS
CTAGATGAGGTTAAGGATAG+AGG 0.427298 3_3:+66400835 Msa0465910:CDS
AAACATAATATCATTTAAAT+CGG 0.427339 3_3:-66400404 None:intergenic
AAATTAACTATGATGTGAAA+AGG 0.437634 3_3:+66401049 Msa0465910:CDS
TGAAGCCCTTGCCGCTCTTA+GGG 0.438198 3_3:+66400504 Msa0465910:CDS
ACCACTTGAAGGAATTTGCT+TGG 0.441871 3_3:+66400722 Msa0465910:CDS
GAAATGATGGAAGGAGAAAA+GGG 0.444552 3_3:+66401096 Msa0465910:CDS
TTAACATATAGGACTGAGTA+AGG 0.448292 3_3:-66400670 None:intergenic
TTTCCATAAGTTAATCCAAA+AGG 0.450715 3_3:+66401200 Msa0465910:CDS
CACTTCCATAATTAACATAT+AGG 0.451185 3_3:-66400681 None:intergenic
TATGACAGATCACCACTTGA+AGG 0.456340 3_3:+66400711 Msa0465910:CDS
CTGAGGCACAAAATTGTTTG+AGG 0.457633 3_3:+66400440 Msa0465910:CDS
AATTAACTATGATGTGAAAA+GGG 0.466340 3_3:+66401050 Msa0465910:CDS
GTGCTTGCTCATCCATCAGT+TGG 0.479121 3_3:+66400889 Msa0465910:CDS
TGGTACGAACTTTCCTAAGA+AGG 0.479483 3_3:+66400570 Msa0465910:CDS
AAGAATGGCCAACAAATAGT+AGG 0.483470 3_3:-66400970 None:intergenic
AGAGTTTCTAGATGAGGTTA+AGG 0.485821 3_3:+66400828 Msa0465910:CDS
TGATTATCATAGAACTCAAA+TGG 0.491997 3_3:-66401238 None:intergenic
GTTTGATTTCTTGGGTTCTG+AGG 0.496308 3_3:+66400423 Msa0465910:CDS
GTTTGTTGCTCTGCAAAGAA+TGG 0.505033 3_3:-66400985 None:intergenic
AGAACTTGTGATGGAAATGA+TGG 0.507214 3_3:+66401083 Msa0465910:CDS
TCGGTGACTCTCATAAAACT+TGG 0.510649 3_3:-66400385 None:intergenic
CTGATGGATGAGCAAGCACT+TGG 0.511223 3_3:-66400885 None:intergenic
TGAGACAAAAGAGTTTAGAG+TGG 0.513272 3_3:+66401127 Msa0465910:CDS
CCCAAGCAAATTCCTTCAAG+TGG 0.523214 3_3:-66400723 None:intergenic
AACCCAAACATATATAGCAT+TGG 0.528923 3_3:+66400532 Msa0465910:CDS
ATTGGTCCACTTCACATGCT+TGG 0.530255 3_3:+66400550 Msa0465910:CDS
GCTTGCTCATCCATCAGTTG+GGG 0.531389 3_3:+66400891 Msa0465910:CDS
TTTGGCCCTAAGAGCGGCAA+GGG 0.533339 3_3:-66400509 None:intergenic
CACTTGAAGGAATTTGCTTG+GGG 0.535238 3_3:+66400724 Msa0465910:CDS
GCCACAAGAGTTTCTAGATG+AGG 0.537914 3_3:+66400822 Msa0465910:CDS
AGAGATAACAGAACTTGTGA+TGG 0.539853 3_3:+66401074 Msa0465910:CDS
CAACACTTGGAGAATAGGAA+TGG 0.540623 3_3:+66401026 Msa0465910:CDS
ATAGAGGATACATAACTAGT+TGG 0.545228 3_3:+66400851 Msa0465910:CDS
GTGAGACCAGATGTAGTAAT+GGG 0.546373 3_3:+66400781 Msa0465910:CDS
TTTCATTGTTGATGGCACCT+TGG 0.556341 3_3:+66400309 Msa0465910:CDS
CCAATCTAAACATGTATCCA+AGG 0.560724 3_3:-66400326 None:intergenic
GTAGGTATTTATGCAACACT+TGG 0.572740 3_3:+66401013 Msa0465910:CDS
TTCGTACCAAGCATGTGAAG+TGG 0.583854 3_3:-66400556 None:intergenic
AACTTTCCTAAGAAGGAACA+TGG 0.596271 3_3:+66400577 Msa0465910:CDS
TGTGAGACCAGATGTAGTAA+TGG 0.596460 3_3:+66400780 Msa0465910:CDS
TGACTCTCATAAAACTTGGA+AGG 0.606477 3_3:-66400381 None:intergenic
AAATGATGGAAGGAGAAAAG+GGG 0.640498 3_3:+66401097 Msa0465910:CDS
ACCTCATCTAGAAACTCTTG+TGG 0.647806 3_3:-66400823 None:intergenic
CTTGTGATGGAAATGATGGA+AGG 0.648111 3_3:+66401087 Msa0465910:CDS
ATAGATGCTACTAATTTGGG+AGG 0.676642 3_3:+66401162 Msa0465910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACATAATATCATTTAAAT+CGG - chr3_3:66400407-66400426 None:intergenic 10.0%
!! AAACATAATATCATTTAAAT+CGG - chr3_3:66400407-66400426 None:intergenic 10.0%
!!! ATAGTAAATTACCATTTTTA+TGG + chr3_3:66400755-66400774 Msa0465910:CDS 15.0%
!!! ATAGTAAATTACCATTTTTA+TGG + chr3_3:66400755-66400774 Msa0465910:CDS 15.0%
!!! TGATATTATGTTTGATTTCT+TGG + chr3_3:66400414-66400433 Msa0465910:CDS 20.0%
!!! GATATTATGTTTGATTTCTT+GGG + chr3_3:66400415-66400434 Msa0465910:CDS 20.0%
!! AAATTAACTATGATGTGAAA+AGG + chr3_3:66401049-66401068 Msa0465910:CDS 20.0%
!! AATTAACTATGATGTGAAAA+GGG + chr3_3:66401050-66401069 Msa0465910:CDS 20.0%
!!! TGATATTATGTTTGATTTCT+TGG + chr3_3:66400414-66400433 Msa0465910:CDS 20.0%
!!! GATATTATGTTTGATTTCTT+GGG + chr3_3:66400415-66400434 Msa0465910:CDS 20.0%
!! AAATTAACTATGATGTGAAA+AGG + chr3_3:66401049-66401068 Msa0465910:CDS 20.0%
!! AATTAACTATGATGTGAAAA+GGG + chr3_3:66401050-66401069 Msa0465910:CDS 20.0%
! GATGAAAATTTCATTGTTGA+TGG + chr3_3:66400301-66400320 Msa0465910:CDS 25.0%
! TCAGTCCTATATGTTAATTA+TGG + chr3_3:66400676-66400695 Msa0465910:CDS 25.0%
! CACTTCCATAATTAACATAT+AGG - chr3_3:66400684-66400703 None:intergenic 25.0%
! TTTCCATAAGTTAATCCAAA+AGG + chr3_3:66401200-66401219 Msa0465910:CDS 25.0%
! GATGAAAATTTCATTGTTGA+TGG + chr3_3:66400301-66400320 Msa0465910:CDS 25.0%
! TCAGTCCTATATGTTAATTA+TGG + chr3_3:66400676-66400695 Msa0465910:CDS 25.0%
! CACTTCCATAATTAACATAT+AGG - chr3_3:66400684-66400703 None:intergenic 25.0%
! TTTCCATAAGTTAATCCAAA+AGG + chr3_3:66401200-66401219 Msa0465910:CDS 25.0%
!! GCTATATATGTTTGGGTTTT+TGG - chr3_3:66400530-66400549 None:intergenic 30.0%
AACCCAAACATATATAGCAT+TGG + chr3_3:66400532-66400551 Msa0465910:CDS 30.0%
GACCAATGCTATATATGTTT+GGG - chr3_3:66400537-66400556 None:intergenic 30.0%
TTAAAACCATGTTCCTTCTT+AGG - chr3_3:66400586-66400605 None:intergenic 30.0%
!! TAAGAAGGAACATGGTTTTA+AGG + chr3_3:66400585-66400604 Msa0465910:CDS 30.0%
GCACAAAATGGTTGAATAAA+TGG + chr3_3:66400644-66400663 Msa0465910:CDS 30.0%
TTAACATATAGGACTGAGTA+AGG - chr3_3:66400673-66400692 None:intergenic 30.0%
ATAGAGGATACATAACTAGT+TGG + chr3_3:66400851-66400870 Msa0465910:CDS 30.0%
! TTTTTCTAACTCATTGTGGT+TGG + chr3_3:66400914-66400933 Msa0465910:CDS 30.0%
AGCTATAGATGCTACTAATT+TGG + chr3_3:66401158-66401177 Msa0465910:CDS 30.0%
GCTATAGATGCTACTAATTT+GGG + chr3_3:66401159-66401178 Msa0465910:CDS 30.0%
! GAACCTTTTGGATTAACTTA+TGG - chr3_3:66401206-66401225 None:intergenic 30.0%
!! GCTATATATGTTTGGGTTTT+TGG - chr3_3:66400530-66400549 None:intergenic 30.0%
AACCCAAACATATATAGCAT+TGG + chr3_3:66400532-66400551 Msa0465910:CDS 30.0%
GACCAATGCTATATATGTTT+GGG - chr3_3:66400537-66400556 None:intergenic 30.0%
TTAAAACCATGTTCCTTCTT+AGG - chr3_3:66400586-66400605 None:intergenic 30.0%
!! TAAGAAGGAACATGGTTTTA+AGG + chr3_3:66400585-66400604 Msa0465910:CDS 30.0%
GCACAAAATGGTTGAATAAA+TGG + chr3_3:66400644-66400663 Msa0465910:CDS 30.0%
TTAACATATAGGACTGAGTA+AGG - chr3_3:66400673-66400692 None:intergenic 30.0%
ATAGAGGATACATAACTAGT+TGG + chr3_3:66400851-66400870 Msa0465910:CDS 30.0%
! TTTTTCTAACTCATTGTGGT+TGG + chr3_3:66400914-66400933 Msa0465910:CDS 30.0%
AGCTATAGATGCTACTAATT+TGG + chr3_3:66401158-66401177 Msa0465910:CDS 30.0%
GCTATAGATGCTACTAATTT+GGG + chr3_3:66401159-66401178 Msa0465910:CDS 30.0%
! GAACCTTTTGGATTAACTTA+TGG - chr3_3:66401206-66401225 None:intergenic 30.0%
CCAATCTAAACATGTATCCA+AGG - chr3_3:66400329-66400348 None:intergenic 35.0%
CCTTGGATACATGTTTAGAT+TGG + chr3_3:66400326-66400345 Msa0465910:CDS 35.0%
ACATGTTTAGATTGGATCTC+TGG + chr3_3:66400334-66400353 Msa0465910:CDS 35.0%
TGACTCTCATAAAACTTGGA+AGG - chr3_3:66400384-66400403 None:intergenic 35.0%
GGACCAATGCTATATATGTT+TGG - chr3_3:66400538-66400557 None:intergenic 35.0%
AACTTTCCTAAGAAGGAACA+TGG + chr3_3:66400577-66400596 Msa0465910:CDS 35.0%
!!! GAACATGGTTTTAAGGCAAA+TGG + chr3_3:66400592-66400611 Msa0465910:CDS 35.0%
! AGGCAAATGGTTCAAGTTTA+TGG + chr3_3:66400605-66400624 Msa0465910:CDS 35.0%
! TCAACCATTTTGTGCATTCT+AGG - chr3_3:66400639-66400658 None:intergenic 35.0%
GGTCTCACAATCCATAAAAA+TGG - chr3_3:66400769-66400788 None:intergenic 35.0%
! AGAGTTTCTAGATGAGGTTA+AGG + chr3_3:66400828-66400847 Msa0465910:CDS 35.0%
CAAGTGTTCCTACTATTTGT+TGG + chr3_3:66400962-66400981 Msa0465910:CDS 35.0%
AAGAATGGCCAACAAATAGT+AGG - chr3_3:66400973-66400992 None:intergenic 35.0%
CAGAGCAACAAACAAATTGT+AGG + chr3_3:66400995-66401014 Msa0465910:CDS 35.0%
GTAGGTATTTATGCAACACT+TGG + chr3_3:66401013-66401032 Msa0465910:CDS 35.0%
TTATGCAACACTTGGAGAAT+AGG + chr3_3:66401021-66401040 Msa0465910:CDS 35.0%
AGAGATAACAGAACTTGTGA+TGG + chr3_3:66401074-66401093 Msa0465910:CDS 35.0%
! AGAACTTGTGATGGAAATGA+TGG + chr3_3:66401083-66401102 Msa0465910:CDS 35.0%
! GAAATGATGGAAGGAGAAAA+GGG + chr3_3:66401096-66401115 Msa0465910:CDS 35.0%
! AAATGATGGAAGGAGAAAAG+GGG + chr3_3:66401097-66401116 Msa0465910:CDS 35.0%
TGAGACAAAAGAGTTTAGAG+TGG + chr3_3:66401127-66401146 Msa0465910:CDS 35.0%
ATAGATGCTACTAATTTGGG+AGG + chr3_3:66401162-66401181 Msa0465910:CDS 35.0%
! CATTGTGATGAAGAACCTTT+TGG - chr3_3:66401218-66401237 None:intergenic 35.0%
CCAATCTAAACATGTATCCA+AGG - chr3_3:66400329-66400348 None:intergenic 35.0%
CCTTGGATACATGTTTAGAT+TGG + chr3_3:66400326-66400345 Msa0465910:CDS 35.0%
ACATGTTTAGATTGGATCTC+TGG + chr3_3:66400334-66400353 Msa0465910:CDS 35.0%
TGACTCTCATAAAACTTGGA+AGG - chr3_3:66400384-66400403 None:intergenic 35.0%
GGACCAATGCTATATATGTT+TGG - chr3_3:66400538-66400557 None:intergenic 35.0%
AACTTTCCTAAGAAGGAACA+TGG + chr3_3:66400577-66400596 Msa0465910:CDS 35.0%
!!! GAACATGGTTTTAAGGCAAA+TGG + chr3_3:66400592-66400611 Msa0465910:CDS 35.0%
! AGGCAAATGGTTCAAGTTTA+TGG + chr3_3:66400605-66400624 Msa0465910:CDS 35.0%
! TCAACCATTTTGTGCATTCT+AGG - chr3_3:66400639-66400658 None:intergenic 35.0%
GGTCTCACAATCCATAAAAA+TGG - chr3_3:66400769-66400788 None:intergenic 35.0%
! AGAGTTTCTAGATGAGGTTA+AGG + chr3_3:66400828-66400847 Msa0465910:CDS 35.0%
CAAGTGTTCCTACTATTTGT+TGG + chr3_3:66400962-66400981 Msa0465910:CDS 35.0%
AAGAATGGCCAACAAATAGT+AGG - chr3_3:66400973-66400992 None:intergenic 35.0%
CAGAGCAACAAACAAATTGT+AGG + chr3_3:66400995-66401014 Msa0465910:CDS 35.0%
GTAGGTATTTATGCAACACT+TGG + chr3_3:66401013-66401032 Msa0465910:CDS 35.0%
TTATGCAACACTTGGAGAAT+AGG + chr3_3:66401021-66401040 Msa0465910:CDS 35.0%
AGAGATAACAGAACTTGTGA+TGG + chr3_3:66401074-66401093 Msa0465910:CDS 35.0%
! AGAACTTGTGATGGAAATGA+TGG + chr3_3:66401083-66401102 Msa0465910:CDS 35.0%
! GAAATGATGGAAGGAGAAAA+GGG + chr3_3:66401096-66401115 Msa0465910:CDS 35.0%
! AAATGATGGAAGGAGAAAAG+GGG + chr3_3:66401097-66401116 Msa0465910:CDS 35.0%
TGAGACAAAAGAGTTTAGAG+TGG + chr3_3:66401127-66401146 Msa0465910:CDS 35.0%
ATAGATGCTACTAATTTGGG+AGG + chr3_3:66401162-66401181 Msa0465910:CDS 35.0%
! CATTGTGATGAAGAACCTTT+TGG - chr3_3:66401218-66401237 None:intergenic 35.0%
!! TTTCATTGTTGATGGCACCT+TGG + chr3_3:66400309-66400328 Msa0465910:CDS 40.0%
TCGGTGACTCTCATAAAACT+TGG - chr3_3:66400388-66400407 None:intergenic 40.0%
! GTTTGATTTCTTGGGTTCTG+AGG + chr3_3:66400423-66400442 Msa0465910:CDS 40.0%
CTGAGGCACAAAATTGTTTG+AGG + chr3_3:66400440-66400459 Msa0465910:CDS 40.0%
TGGTACGAACTTTCCTAAGA+AGG + chr3_3:66400570-66400589 Msa0465910:CDS 40.0%
GTGACCTAGAATGCACAAAA+TGG + chr3_3:66400632-66400651 Msa0465910:CDS 40.0%
TATGACAGATCACCACTTGA+AGG + chr3_3:66400711-66400730 Msa0465910:CDS 40.0%
! ACCACTTGAAGGAATTTGCT+TGG + chr3_3:66400722-66400741 Msa0465910:CDS 40.0%
! CCACTTGAAGGAATTTGCTT+GGG + chr3_3:66400723-66400742 Msa0465910:CDS 40.0%
! CACTTGAAGGAATTTGCTTG+GGG + chr3_3:66400724-66400743 Msa0465910:CDS 40.0%
TGTGAGACCAGATGTAGTAA+TGG + chr3_3:66400780-66400799 Msa0465910:CDS 40.0%
GTGAGACCAGATGTAGTAAT+GGG + chr3_3:66400781-66400800 Msa0465910:CDS 40.0%
TCTTCACCCATTACTACATC+TGG - chr3_3:66400790-66400809 None:intergenic 40.0%
ACCTCATCTAGAAACTCTTG+TGG - chr3_3:66400826-66400845 None:intergenic 40.0%
CTAGATGAGGTTAAGGATAG+AGG + chr3_3:66400835-66400854 Msa0465910:CDS 40.0%
GTTAGAAAAACCCCAACTGA+TGG - chr3_3:66400904-66400923 None:intergenic 40.0%
! GGGGTTTTTCTAACTCATTG+TGG + chr3_3:66400910-66400929 Msa0465910:CDS 40.0%
! GTTTGTTGCTCTGCAAAGAA+TGG - chr3_3:66400988-66401007 None:intergenic 40.0%
CAACACTTGGAGAATAGGAA+TGG + chr3_3:66401026-66401045 Msa0465910:CDS 40.0%
! CTTGTGATGGAAATGATGGA+AGG + chr3_3:66401087-66401106 Msa0465910:CDS 40.0%
! GGAAATGATGGAAGGAGAAA+AGG + chr3_3:66401095-66401114 Msa0465910:CDS 40.0%
!! TTTCATTGTTGATGGCACCT+TGG + chr3_3:66400309-66400328 Msa0465910:CDS 40.0%
TCGGTGACTCTCATAAAACT+TGG - chr3_3:66400388-66400407 None:intergenic 40.0%
! GTTTGATTTCTTGGGTTCTG+AGG + chr3_3:66400423-66400442 Msa0465910:CDS 40.0%
CTGAGGCACAAAATTGTTTG+AGG + chr3_3:66400440-66400459 Msa0465910:CDS 40.0%
TGGTACGAACTTTCCTAAGA+AGG + chr3_3:66400570-66400589 Msa0465910:CDS 40.0%
GTGACCTAGAATGCACAAAA+TGG + chr3_3:66400632-66400651 Msa0465910:CDS 40.0%
TATGACAGATCACCACTTGA+AGG + chr3_3:66400711-66400730 Msa0465910:CDS 40.0%
! ACCACTTGAAGGAATTTGCT+TGG + chr3_3:66400722-66400741 Msa0465910:CDS 40.0%
! CCACTTGAAGGAATTTGCTT+GGG + chr3_3:66400723-66400742 Msa0465910:CDS 40.0%
! CACTTGAAGGAATTTGCTTG+GGG + chr3_3:66400724-66400743 Msa0465910:CDS 40.0%
TGTGAGACCAGATGTAGTAA+TGG + chr3_3:66400780-66400799 Msa0465910:CDS 40.0%
GTGAGACCAGATGTAGTAAT+GGG + chr3_3:66400781-66400800 Msa0465910:CDS 40.0%
TCTTCACCCATTACTACATC+TGG - chr3_3:66400790-66400809 None:intergenic 40.0%
ACCTCATCTAGAAACTCTTG+TGG - chr3_3:66400826-66400845 None:intergenic 40.0%
CTAGATGAGGTTAAGGATAG+AGG + chr3_3:66400835-66400854 Msa0465910:CDS 40.0%
GTTAGAAAAACCCCAACTGA+TGG - chr3_3:66400904-66400923 None:intergenic 40.0%
! GGGGTTTTTCTAACTCATTG+TGG + chr3_3:66400910-66400929 Msa0465910:CDS 40.0%
! GTTTGTTGCTCTGCAAAGAA+TGG - chr3_3:66400988-66401007 None:intergenic 40.0%
CAACACTTGGAGAATAGGAA+TGG + chr3_3:66401026-66401045 Msa0465910:CDS 40.0%
! CTTGTGATGGAAATGATGGA+AGG + chr3_3:66401087-66401106 Msa0465910:CDS 40.0%
! GGAAATGATGGAAGGAGAAA+AGG + chr3_3:66401095-66401114 Msa0465910:CDS 40.0%
ATTGGTCCACTTCACATGCT+TGG + chr3_3:66400550-66400569 Msa0465910:CDS 45.0%
TTCGTACCAAGCATGTGAAG+TGG - chr3_3:66400559-66400578 None:intergenic 45.0%
CCCAAGCAAATTCCTTCAAG+TGG - chr3_3:66400726-66400745 None:intergenic 45.0%
! GCCACAAGAGTTTCTAGATG+AGG + chr3_3:66400822-66400841 Msa0465910:CDS 45.0%
TGCTTGCTCATCCATCAGTT+GGG + chr3_3:66400890-66400909 Msa0465910:CDS 45.0%
ATTGGTCCACTTCACATGCT+TGG + chr3_3:66400550-66400569 Msa0465910:CDS 45.0%
TTCGTACCAAGCATGTGAAG+TGG - chr3_3:66400559-66400578 None:intergenic 45.0%
CCCAAGCAAATTCCTTCAAG+TGG - chr3_3:66400726-66400745 None:intergenic 45.0%
! GCCACAAGAGTTTCTAGATG+AGG + chr3_3:66400822-66400841 Msa0465910:CDS 45.0%
TGCTTGCTCATCCATCAGTT+GGG + chr3_3:66400890-66400909 Msa0465910:CDS 45.0%
!!! TGGGTTTTTGGCCCTAAGAG+CGG - chr3_3:66400518-66400537 None:intergenic 50.0%
! CTGATGGATGAGCAAGCACT+TGG - chr3_3:66400888-66400907 None:intergenic 50.0%
GTGCTTGCTCATCCATCAGT+TGG + chr3_3:66400889-66400908 Msa0465910:CDS 50.0%
GCTTGCTCATCCATCAGTTG+GGG + chr3_3:66400891-66400910 Msa0465910:CDS 50.0%
!!! TGGGTTTTTGGCCCTAAGAG+CGG - chr3_3:66400518-66400537 None:intergenic 50.0%
! CTGATGGATGAGCAAGCACT+TGG - chr3_3:66400888-66400907 None:intergenic 50.0%
GTGCTTGCTCATCCATCAGT+TGG + chr3_3:66400889-66400908 Msa0465910:CDS 50.0%
GCTTGCTCATCCATCAGTTG+GGG + chr3_3:66400891-66400910 Msa0465910:CDS 50.0%
ATGAAGCCCTTGCCGCTCTT+AGG + chr3_3:66400503-66400522 Msa0465910:CDS 55.0%
TGAAGCCCTTGCCGCTCTTA+GGG + chr3_3:66400504-66400523 Msa0465910:CDS 55.0%
TTTGGCCCTAAGAGCGGCAA+GGG - chr3_3:66400512-66400531 None:intergenic 55.0%
! TTTTGGCCCTAAGAGCGGCA+AGG - chr3_3:66400513-66400532 None:intergenic 55.0%
ATGAAGCCCTTGCCGCTCTT+AGG + chr3_3:66400503-66400522 Msa0465910:CDS 55.0%
TGAAGCCCTTGCCGCTCTTA+GGG + chr3_3:66400504-66400523 Msa0465910:CDS 55.0%
TTTGGCCCTAAGAGCGGCAA+GGG - chr3_3:66400512-66400531 None:intergenic 55.0%
! TTTTGGCCCTAAGAGCGGCA+AGG - chr3_3:66400513-66400532 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 66400289 66401245 66400289 ID=Msa0465910;Name=Msa0465910
chr3_3 mRNA 66400289 66401245 66400289 ID=Msa0465910-mRNA-1;Parent=Msa0465910;Name=Msa0465910-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|-1|0|1|-1|1|1|0|318
chr3_3 exon 66400289 66401245 66400289 ID=Msa0465910-mRNA-1:exon:15063;Parent=Msa0465910-mRNA-1
chr3_3 CDS 66400289 66401245 66400289 ID=Msa0465910-mRNA-1:cds;Parent=Msa0465910-mRNA-1
Gene Sequence

>Msa0465910

ATGACATTTTTAGATGAAAATTTCATTGTTGATGGCACCTTGGATACATGTTTAGATTGGATCTCTGGTATAAAAGATATCAGACTAAAAGACCTTCCAAGTTTTATGAGAGTCACCGATTTAAATGATATTATGTTTGATTTCTTGGGTTCTGAGGCACAAAATTGTTTGAGGTCATCAACAATTATAATCAACACATTTGAAGAATTAGAACATGAAGCCCTTGCCGCTCTTAGGGCCAAAAACCCAAACATATATAGCATTGGTCCACTTCACATGCTTGGTACGAACTTTCCTAAGAAGGAACATGGTTTTAAGGCAAATGGTTCAAGTTTATGGAAAAGTGACCTAGAATGCACAAAATGGTTGAATAAATGGAAACCTTACTCAGTCCTATATGTTAATTATGGAAGTGTAACTATTATGACAGATCACCACTTGAAGGAATTTGCTTGGGGAATAGCAAATAGTAAATTACCATTTTTATGGATTGTGAGACCAGATGTAGTAATGGGTGAAGAAATTTCAACTTTGCCACAAGAGTTTCTAGATGAGGTTAAGGATAGAGGATACATAACTAGTTGGTGCATGCAAAACCAAGTGCTTGCTCATCCATCAGTTGGGGTTTTTCTAACTCATTGTGGTTGGAATTCTACAATTGAAACAATTTCTTCAAGTGTTCCTACTATTTGTTGGCCATTCTTTGCAGAGCAACAAACAAATTGTAGGTATTTATGCAACACTTGGAGAATAGGAATGGAAATTAACTATGATGTGAAAAGGGAAGAGATAACAGAACTTGTGATGGAAATGATGGAAGGAGAAAAGGGGAAAGAAATGAGACAAAAGAGTTTAGAGTGGAAGAAGAAAGCTATAGATGCTACTAATTTGGGAGGATCATCATACAATAATTTCCATAAGTTAATCCAAAAGGTTCTTCATCACAATGCCATTTGA

Protein sequence

>Msa0465910

MTFLDENFIVDGTLDTCLDWISGIKDIRLKDLPSFMRVTDLNDIMFDFLGSEAQNCLRSSTIIINTFEELEHEALAALRAKNPNIYSIGPLHMLGTNFPKKEHGFKANGSSLWKSDLECTKWLNKWKPYSVLYVNYGSVTIMTDHHLKEFAWGIANSKLPFLWIVRPDVVMGEEISTLPQEFLDEVKDRGYITSWCMQNQVLAHPSVGVFLTHCGWNSTIETISSSVPTICWPFFAEQQTNCRYLCNTWRIGMEINYDVKREEITELVMEMMEGEKGKEMRQKSLEWKKKAIDATNLGGSSYNNFHKLIQKVLHHNAI*