Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0843220 | XP_003613278.1 | 97.534 | 365 | 6 | 2 | 1 | 365 | 1 | 362 | 0.0 | 734 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0843220 | sp|K4PW38|RSS3_ORYSJ | 36.444 | 225 | 105 | 7 | 14 | 227 | 31 | 228 | 8.95e-36 | 138 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0843220 | G7K2R0 | 97.534 | 365 | 6 | 2 | 1 | 365 | 1 | 362 | 0.0 | 734 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000190 | Msa0843220 | 0.831524 | 1.589522e-55 | -8.615850e-47 |
Msa0001780 | Msa0843220 | 0.801451 | 8.948039e-49 | -8.615850e-47 |
Msa0003700 | Msa0843220 | 0.827991 | 1.151989e-54 | -8.615850e-47 |
Msa0017510 | Msa0843220 | 0.863988 | 1.680201e-64 | -8.615850e-47 |
Msa0024550 | Msa0843220 | 0.825205 | 5.321561e-54 | -8.615850e-47 |
Msa0028420 | Msa0843220 | 0.804166 | 2.461259e-49 | -8.615850e-47 |
Msa0028640 | Msa0843220 | 0.812491 | 4.127734e-51 | -8.615850e-47 |
Msa0029880 | Msa0843220 | 0.800538 | 1.375120e-48 | -8.615850e-47 |
Msa0029890 | Msa0843220 | 0.804049 | 2.603209e-49 | -8.615850e-47 |
Msa0032840 | Msa0843220 | -0.807122 | 5.896233e-50 | -8.615850e-47 |
Msa0040450 | Msa0843220 | 0.804649 | 1.952400e-49 | -8.615850e-47 |
Msa0076250 | Msa0843220 | 0.838446 | 2.862011e-57 | -8.615850e-47 |
Msa0089630 | Msa0843220 | 0.825485 | 4.569860e-54 | -8.615850e-47 |
Msa0101810 | Msa0843220 | -0.823946 | 1.053506e-53 | -8.615850e-47 |
Msa0110970 | Msa0843220 | 0.854974 | 8.608322e-62 | -8.615850e-47 |
Msa0112570 | Msa0843220 | 0.804127 | 2.507282e-49 | -8.615850e-47 |
Msa0114540 | Msa0843220 | -0.828175 | 1.040309e-54 | -8.615850e-47 |
Msa0120400 | Msa0843220 | 0.833991 | 3.879630e-56 | -8.615850e-47 |
Msa0620240 | Msa0843220 | 0.803866 | 2.841661e-49 | -8.615850e-47 |
Msa0626090 | Msa0843220 | 0.809350 | 1.976558e-50 | -8.615850e-47 |
Msa0626510 | Msa0843220 | 0.814548 | 1.456944e-51 | -8.615850e-47 |
Msa0627450 | Msa0843220 | 0.836869 | 7.266133e-57 | -8.615850e-47 |
Msa0641360 | Msa0843220 | 0.814010 | 1.915002e-51 | -8.615850e-47 |
Msa0646090 | Msa0843220 | 0.815077 | 1.111877e-51 | -8.615850e-47 |
Msa0648880 | Msa0843220 | 0.800114 | 1.677690e-48 | -8.615850e-47 |
Msa0649980 | Msa0843220 | 0.814019 | 1.906122e-51 | -8.615850e-47 |
Msa0650020 | Msa0843220 | 0.807913 | 4.005941e-50 | -8.615850e-47 |
Msa0657970 | Msa0843220 | 0.837675 | 4.518489e-57 | -8.615850e-47 |
Msa0669320 | Msa0843220 | 0.812421 | 4.275027e-51 | -8.615850e-47 |
Msa0682620 | Msa0843220 | 0.823286 | 1.502752e-53 | -8.615850e-47 |
Msa0683510 | Msa0843220 | 0.858211 | 9.626528e-63 | -8.615850e-47 |
Msa0683570 | Msa0843220 | 0.808247 | 3.401304e-50 | -8.615850e-47 |
Msa0683730 | Msa0843220 | 0.800249 | 1.574871e-48 | -8.615850e-47 |
Msa0688770 | Msa0843220 | 0.828558 | 8.411286e-55 | -8.615850e-47 |
Msa0702350 | Msa0843220 | 0.805694 | 1.179793e-49 | -8.615850e-47 |
Msa0702590 | Msa0843220 | 0.800469 | 1.420589e-48 | -8.615850e-47 |
Msa0702660 | Msa0843220 | 0.802247 | 6.141270e-49 | -8.615850e-47 |
Msa0720070 | Msa0843220 | 0.818356 | 2.045315e-52 | -8.615850e-47 |
Msa0722780 | Msa0843220 | 0.917633 | 4.186978e-86 | -8.615850e-47 |
Msa0722850 | Msa0843220 | 0.927834 | 6.752389e-92 | -8.615850e-47 |
Msa0723000 | Msa0843220 | 0.916387 | 1.894281e-85 | -8.615850e-47 |
Msa0723050 | Msa0843220 | 0.915374 | 6.353139e-85 | -8.615850e-47 |
Msa0727930 | Msa0843220 | 0.814787 | 1.289826e-51 | -8.615850e-47 |
Msa0733390 | Msa0843220 | 0.800925 | 1.146578e-48 | -8.615850e-47 |
Msa0749460 | Msa0843220 | 0.813806 | 2.124600e-51 | -8.615850e-47 |
Msa0754520 | Msa0843220 | 0.800402 | 1.465680e-48 | -8.615850e-47 |
Msa0756630 | Msa0843220 | -0.826201 | 3.088952e-54 | -8.615850e-47 |
Msa0760130 | Msa0843220 | 0.800376 | 1.483897e-48 | -8.615850e-47 |
Msa0761580 | Msa0843220 | 0.801484 | 8.809790e-49 | -8.615850e-47 |
Msa0767300 | Msa0843220 | 0.809113 | 2.221426e-50 | -8.615850e-47 |
Msa0769180 | Msa0843220 | 0.800916 | 1.151395e-48 | -8.615850e-47 |
Msa0770080 | Msa0843220 | 0.814353 | 1.608399e-51 | -8.615850e-47 |
Msa0785210 | Msa0843220 | 0.833009 | 6.821645e-56 | -8.615850e-47 |
Msa0786500 | Msa0843220 | 0.800557 | 1.363217e-48 | -8.615850e-47 |
Msa0801760 | Msa0843220 | 0.816507 | 5.337350e-52 | -8.615850e-47 |
Msa0802470 | Msa0843220 | -0.803808 | 2.920660e-49 | -8.615850e-47 |
Msa0810220 | Msa0843220 | 0.807227 | 5.602906e-50 | -8.615850e-47 |
Msa0816150 | Msa0843220 | 0.805057 | 1.603748e-49 | -8.615850e-47 |
Msa0822870 | Msa0843220 | 0.817514 | 3.169884e-52 | -8.615850e-47 |
Msa0828560 | Msa0843220 | 0.846216 | 2.496904e-59 | -8.615850e-47 |
Msa0829620 | Msa0843220 | 0.804809 | 1.807348e-49 | -8.615850e-47 |
Msa0833220 | Msa0843220 | 0.808367 | 3.206276e-50 | -8.615850e-47 |
Msa0834770 | Msa0843220 | 0.809178 | 2.151304e-50 | -8.615850e-47 |
Msa0838580 | Msa0843220 | 0.807620 | 4.623343e-50 | -8.615850e-47 |
Msa0124060 | Msa0843220 | 0.820577 | 6.372627e-53 | -8.615850e-47 |
Msa0124280 | Msa0843220 | 0.807583 | 4.709484e-50 | -8.615850e-47 |
Msa0125090 | Msa0843220 | 0.808950 | 2.407268e-50 | -8.615850e-47 |
Msa0139060 | Msa0843220 | 0.805190 | 1.504288e-49 | -8.615850e-47 |
Msa0140780 | Msa0843220 | 0.826524 | 2.587896e-54 | -8.615850e-47 |
Msa0141120 | Msa0843220 | 0.802223 | 6.212002e-49 | -8.615850e-47 |
Msa0146260 | Msa0843220 | 0.829528 | 4.894849e-55 | -8.615850e-47 |
Msa0157290 | Msa0843220 | 0.864308 | 1.335424e-64 | -8.615850e-47 |
Msa0164330 | Msa0843220 | 0.800845 | 1.190300e-48 | -8.615850e-47 |
Msa0166560 | Msa0843220 | 0.808252 | 3.393128e-50 | -8.615850e-47 |
Msa0168500 | Msa0843220 | 0.829192 | 5.906545e-55 | -8.615850e-47 |
Msa0169860 | Msa0843220 | 0.840547 | 8.144639e-58 | -8.615850e-47 |
Msa0171300 | Msa0843220 | 0.801558 | 8.508477e-49 | -8.615850e-47 |
Msa0191250 | Msa0843220 | 0.809102 | 2.233863e-50 | -8.615850e-47 |
Msa0197230 | Msa0843220 | 0.814836 | 1.257912e-51 | -8.615850e-47 |
Msa0197660 | Msa0843220 | 0.805539 | 1.271558e-49 | -8.615850e-47 |
Msa0197930 | Msa0843220 | 0.817636 | 2.974880e-52 | -8.615850e-47 |
Msa0200260 | Msa0843220 | 0.823596 | 1.272072e-53 | -8.615850e-47 |
Msa0202950 | Msa0843220 | 0.846458 | 2.144406e-59 | -8.615850e-47 |
Msa0203010 | Msa0843220 | 0.809711 | 1.652847e-50 | -8.615850e-47 |
Msa0203030 | Msa0843220 | 0.816335 | 5.831809e-52 | -8.615850e-47 |
Msa0215320 | Msa0843220 | -0.820781 | 5.721946e-53 | -8.615850e-47 |
Msa0220580 | Msa0843220 | 0.817594 | 3.041064e-52 | -8.615850e-47 |
Msa0220740 | Msa0843220 | 0.808508 | 2.991935e-50 | -8.615850e-47 |
Msa0221290 | Msa0843220 | 0.831861 | 1.313117e-55 | -8.615850e-47 |
Msa0230550 | Msa0843220 | -0.805701 | 1.175400e-49 | -8.615850e-47 |
Msa0370030 | Msa0843220 | 0.827451 | 1.553294e-54 | -8.615850e-47 |
Msa0385390 | Msa0843220 | 0.841799 | 3.816185e-58 | -8.615850e-47 |
Msa0392420 | Msa0843220 | 0.847156 | 1.381800e-59 | -8.615850e-47 |
Msa0392460 | Msa0843220 | 0.844137 | 9.106287e-59 | -8.615850e-47 |
Msa0392490 | Msa0843220 | 0.848825 | 4.789565e-60 | -8.615850e-47 |
Msa0392510 | Msa0843220 | 0.807142 | 5.840467e-50 | -8.615850e-47 |
Msa0395790 | Msa0843220 | 0.828223 | 1.013055e-54 | -8.615850e-47 |
Msa0410500 | Msa0843220 | 0.802778 | 4.772820e-49 | -8.615850e-47 |
Msa0410650 | Msa0843220 | 0.817652 | 2.951058e-52 | -8.615850e-47 |
Msa0415320 | Msa0843220 | 0.817198 | 3.735230e-52 | -8.615850e-47 |
Msa0417270 | Msa0843220 | 0.800650 | 1.304684e-48 | -8.615850e-47 |
Msa0417880 | Msa0843220 | 0.822109 | 2.823872e-53 | -8.615850e-47 |
Msa0419820 | Msa0843220 | 0.807326 | 5.338808e-50 | -8.615850e-47 |
Msa0422850 | Msa0843220 | 0.814895 | 1.220492e-51 | -8.615850e-47 |
Msa0422930 | Msa0843220 | 0.813683 | 2.260374e-51 | -8.615850e-47 |
Msa0436490 | Msa0843220 | -0.801172 | 1.020608e-48 | -8.615850e-47 |
Msa0440750 | Msa0843220 | 0.806293 | 8.826254e-50 | -8.615850e-47 |
Msa0443260 | Msa0843220 | 0.838427 | 2.895392e-57 | -8.615850e-47 |
Msa0450440 | Msa0843220 | 0.808431 | 3.108259e-50 | -8.615850e-47 |
Msa0461720 | Msa0843220 | 0.827386 | 1.610213e-54 | -8.615850e-47 |
Msa0465910 | Msa0843220 | 0.829628 | 4.628602e-55 | -8.615850e-47 |
Msa0465950 | Msa0843220 | 0.826576 | 2.514915e-54 | -8.615850e-47 |
Msa0467430 | Msa0843220 | 0.815231 | 1.027608e-51 | -8.615850e-47 |
Msa0469160 | Msa0843220 | 0.802220 | 6.219625e-49 | -8.615850e-47 |
Msa0479540 | Msa0843220 | 0.803782 | 2.958070e-49 | -8.615850e-47 |
Msa0480980 | Msa0843220 | 0.815157 | 1.067717e-51 | -8.615850e-47 |
Msa0239030 | Msa0843220 | 0.810950 | 8.931493e-51 | -8.615850e-47 |
Msa0239570 | Msa0843220 | 0.810545 | 1.092867e-50 | -8.615850e-47 |
Msa0239800 | Msa0843220 | 0.800899 | 1.160490e-48 | -8.615850e-47 |
Msa0243100 | Msa0843220 | 0.843504 | 1.345638e-58 | -8.615850e-47 |
Msa0259500 | Msa0843220 | 0.804637 | 1.962920e-49 | -8.615850e-47 |
Msa0261340 | Msa0843220 | 0.830749 | 2.465092e-55 | -8.615850e-47 |
Msa0277180 | Msa0843220 | 0.807110 | 5.931815e-50 | -8.615850e-47 |
Msa0284410 | Msa0843220 | 0.804096 | 2.544730e-49 | -8.615850e-47 |
Msa0284420 | Msa0843220 | 0.844626 | 6.727191e-59 | -8.615850e-47 |
Msa0287650 | Msa0843220 | 0.831219 | 1.889840e-55 | -8.615850e-47 |
Msa0300690 | Msa0843220 | 0.814556 | 1.450700e-51 | -8.615850e-47 |
Msa0305700 | Msa0843220 | 0.826780 | 2.248399e-54 | -8.615850e-47 |
Msa0306300 | Msa0843220 | 0.808821 | 2.564814e-50 | -8.615850e-47 |
Msa0311860 | Msa0843220 | 0.803139 | 4.020041e-49 | -8.615850e-47 |
Msa0316680 | Msa0843220 | 0.803679 | 3.106637e-49 | -8.615850e-47 |
Msa0316810 | Msa0843220 | 0.819379 | 1.197981e-52 | -8.615850e-47 |
Msa0317280 | Msa0843220 | 0.803083 | 4.129441e-49 | -8.615850e-47 |
Msa0317510 | Msa0843220 | 0.811085 | 8.350538e-51 | -8.615850e-47 |
Msa0334040 | Msa0843220 | 0.804907 | 1.724110e-49 | -8.615850e-47 |
Msa0341540 | Msa0843220 | 0.800532 | 1.378829e-48 | -8.615850e-47 |
Msa0344570 | Msa0843220 | 0.835081 | 2.064576e-56 | -8.615850e-47 |
Msa0345330 | Msa0843220 | 0.837135 | 6.213500e-57 | -8.615850e-47 |
Msa0345410 | Msa0843220 | 0.830594 | 2.689362e-55 | -8.615850e-47 |
Msa0362780 | Msa0843220 | 0.821908 | 3.143951e-53 | -8.615850e-47 |
Msa0363070 | Msa0843220 | 0.817563 | 3.090803e-52 | -8.615850e-47 |
Msa0363200 | Msa0843220 | 0.808528 | 2.962792e-50 | -8.615850e-47 |
Msa0483150 | Msa0843220 | 0.800853 | 1.186209e-48 | -8.615850e-47 |
Msa0487570 | Msa0843220 | 0.848147 | 7.376990e-60 | -8.615850e-47 |
Msa0487630 | Msa0843220 | 0.855170 | 7.551363e-62 | -8.615850e-47 |
Msa0490390 | Msa0843220 | 0.817664 | 2.932995e-52 | -8.615850e-47 |
Msa0495320 | Msa0843220 | 0.828252 | 9.968357e-55 | -8.615850e-47 |
Msa0498060 | Msa0843220 | 0.832962 | 7.006925e-56 | -8.615850e-47 |
Msa0503580 | Msa0843220 | 0.819053 | 1.421066e-52 | -8.615850e-47 |
Msa0503590 | Msa0843220 | 0.810878 | 9.257959e-51 | -8.615850e-47 |
Msa0507680 | Msa0843220 | 0.811958 | 5.396577e-51 | -8.615850e-47 |
Msa0509790 | Msa0843220 | 0.826243 | 3.018988e-54 | -8.615850e-47 |
Msa0522590 | Msa0843220 | -0.812715 | 3.687436e-51 | -8.615850e-47 |
Msa0523000 | Msa0843220 | 0.802046 | 6.754225e-49 | -8.615850e-47 |
Msa0523460 | Msa0843220 | 0.812026 | 5.214524e-51 | -8.615850e-47 |
Msa0527550 | Msa0843220 | 0.815396 | 9.445560e-52 | -8.615850e-47 |
Msa0533070 | Msa0843220 | 0.800408 | 1.461457e-48 | -8.615850e-47 |
Msa0534930 | Msa0843220 | 0.809959 | 1.462052e-50 | -8.615850e-47 |
Msa0535040 | Msa0843220 | 0.842666 | 2.249625e-58 | -8.615850e-47 |
Msa0547230 | Msa0843220 | 0.808209 | 3.466394e-50 | -8.615850e-47 |
Msa0566500 | Msa0843220 | -0.800793 | 1.220056e-48 | -8.615850e-47 |
Msa0571140 | Msa0843220 | 0.820530 | 6.533174e-53 | -8.615850e-47 |
Msa0574890 | Msa0843220 | 0.837928 | 3.890552e-57 | -8.615850e-47 |
Msa0581760 | Msa0843220 | 0.821410 | 4.097207e-53 | -8.615850e-47 |
Msa0585300 | Msa0843220 | 0.814955 | 1.183629e-51 | -8.615850e-47 |
Msa0591790 | Msa0843220 | 0.818287 | 2.121011e-52 | -8.615850e-47 |
Msa0594660 | Msa0843220 | 0.806274 | 8.907088e-50 | -8.615850e-47 |
Msa0601850 | Msa0843220 | 0.808426 | 3.114989e-50 | -8.615850e-47 |
Msa0602240 | Msa0843220 | 0.804488 | 2.109393e-49 | -8.615850e-47 |
Msa0602250 | Msa0843220 | 0.816979 | 4.181724e-52 | -8.615850e-47 |
Msa0602460 | Msa0843220 | 0.818979 | 1.477100e-52 | -8.615850e-47 |
Msa0843220 | Msa0844240 | 0.812734 | 3.652288e-51 | -8.615850e-47 |
Msa0843220 | Msa0844560 | 0.803856 | 2.854581e-49 | -8.615850e-47 |
Msa0843220 | Msa0849100 | 0.803343 | 3.647814e-49 | -8.615850e-47 |
Msa0843220 | Msa0861510 | 0.835407 | 1.708088e-56 | -8.615850e-47 |
Msa0843220 | Msa0861530 | 0.825953 | 3.537970e-54 | -8.615850e-47 |
Msa0843220 | Msa0861600 | 0.826870 | 2.139769e-54 | -8.615850e-47 |
Msa0843220 | Msa0866270 | 0.820701 | 5.968413e-53 | -8.615850e-47 |
Msa0843220 | Msa0867890 | 0.825034 | 5.841636e-54 | -8.615850e-47 |
Msa0843220 | Msa0870550 | 0.809602 | 1.745087e-50 | -8.615850e-47 |
Msa0843220 | Msa0870640 | 0.800051 | 1.728067e-48 | -8.615850e-47 |
Msa0843220 | Msa0880140 | 0.864744 | 9.754906e-65 | -8.615850e-47 |
Msa0843220 | Msa0883060 | 0.804064 | 2.584089e-49 | -8.615850e-47 |
Msa0843220 | Msa0895790 | 0.815514 | 8.892732e-52 | -8.615850e-47 |
Msa0843220 | Msa0896970 | 0.837025 | 6.628751e-57 | -8.615850e-47 |
Msa0843220 | Msa0903690 | 0.807395 | 5.162268e-50 | -8.615850e-47 |
Msa0843220 | Msa0908050 | 0.819244 | 1.285642e-52 | -8.615850e-47 |
Msa0843220 | Msa0909120 | 0.807993 | 3.852927e-50 | -8.615850e-47 |
Msa0843220 | Msa0909140 | 0.822831 | 1.918871e-53 | -8.615850e-47 |
Msa0843220 | Msa0910430 | 0.815814 | 7.624720e-52 | -8.615850e-47 |
Msa0843220 | Msa0922410 | 0.824317 | 8.617487e-54 | -8.615850e-47 |
Msa0843220 | Msa0930780 | 0.832610 | 8.566646e-56 | -8.615850e-47 |
Msa0843220 | Msa0936340 | 0.807027 | 6.176620e-50 | -8.615850e-47 |
Msa0843220 | Msa0936410 | 0.828077 | 1.098465e-54 | -8.615850e-47 |
Msa0843220 | Msa0941820 | 0.801270 | 9.746242e-49 | -8.615850e-47 |
Msa0843220 | Msa0947660 | 0.815028 | 1.140419e-51 | -8.615850e-47 |
Msa0843220 | Msa0948290 | 0.817009 | 4.117663e-52 | -8.615850e-47 |
Msa0843220 | Msa0959360 | 0.803767 | 2.979714e-49 | -8.615850e-47 |
Msa0843220 | Msa0961690 | 0.818872 | 1.562366e-52 | -8.615850e-47 |
Msa0843220 | Msa0964840 | 0.810839 | 9.440603e-51 | -8.615850e-47 |
Msa0843220 | Msa0967380 | 0.838290 | 3.139228e-57 | -8.615850e-47 |
Msa0843220 | Msa0969520 | 0.807446 | 5.034344e-50 | -8.615850e-47 |
Msa0843220 | Msa0973160 | 0.805173 | 1.516979e-49 | -8.615850e-47 |
Msa0843220 | Msa0973250 | 0.811056 | 8.470749e-51 | -8.615850e-47 |
Msa0843220 | Msa1004550 | 0.810533 | 1.099413e-50 | -8.615850e-47 |
Msa0843220 | Msa1004600 | 0.809812 | 1.572250e-50 | -8.615850e-47 |
Msa0843220 | Msa1005870 | 0.805780 | 1.131409e-49 | -8.615850e-47 |
Msa0843220 | Msa1019430 | 0.827067 | 1.919383e-54 | -8.615850e-47 |
Msa0843220 | Msa1019470 | 0.826311 | 2.908636e-54 | -8.615850e-47 |
Msa0843220 | Msa1030970 | 0.803496 | 3.390366e-49 | -8.615850e-47 |
Msa0843220 | Msa1047980 | 0.830179 | 3.396814e-55 | -8.615850e-47 |
Msa0843220 | Msa1055280 | 0.802570 | 5.269392e-49 | -8.615850e-47 |
Msa0843220 | Msa1070000 | 0.802489 | 5.475886e-49 | -8.615850e-47 |
Msa0843220 | Msa1075220 | -0.826930 | 2.069768e-54 | -8.615850e-47 |
Msa0843220 | Msa1075540 | 0.800508 | 1.394788e-48 | -8.615850e-47 |
Msa0843220 | Msa1077150 | 0.805722 | 1.163849e-49 | -8.615850e-47 |
Msa0843220 | Msa1077180 | 0.826516 | 2.598403e-54 | -8.615850e-47 |
Msa0843220 | Msa1079590 | 0.803215 | 3.876349e-49 | -8.615850e-47 |
Msa0843220 | Msa1080240 | 0.803447 | 3.471388e-49 | -8.615850e-47 |
Msa0843220 | Msa1082500 | 0.815130 | 1.082538e-51 | -8.615850e-47 |
Msa0843220 | Msa1085200 | 0.815248 | 1.018662e-51 | -8.615850e-47 |
Msa0843220 | Msa1085300 | 0.809280 | 2.045712e-50 | -8.615850e-47 |
Msa0843220 | Msa1092010 | 0.807428 | 5.079267e-50 | -8.615850e-47 |
Msa0843220 | Msa1093840 | 0.803639 | 3.167508e-49 | -8.615850e-47 |
Msa0843220 | Msa1098560 | 0.825468 | 4.610788e-54 | -8.615850e-47 |
Msa0843220 | Msa1102770 | 0.809435 | 1.895271e-50 | -8.615850e-47 |
Msa0843220 | Msa1103500 | 0.812466 | 4.179346e-51 | -8.615850e-47 |
Msa0843220 | Msa1104000 | 0.806464 | 8.121856e-50 | -8.615850e-47 |
Msa0843220 | Msa1116130 | -0.814470 | 1.515372e-51 | -8.615850e-47 |
Msa0843220 | Msa1123380 | 0.814700 | 1.347879e-51 | -8.615850e-47 |
Msa0843220 | Msa1123880 | 0.809249 | 2.077325e-50 | -8.615850e-47 |
Msa0843220 | Msa1125000 | 0.826806 | 2.216732e-54 | -8.615850e-47 |
Msa0843220 | Msa1133000 | 0.805208 | 1.491764e-49 | -8.615850e-47 |
Msa0843220 | Msa1137570 | 0.802900 | 4.503511e-49 | -8.615850e-47 |
Msa0843220 | Msa1139810 | 0.810400 | 1.174431e-50 | -8.615850e-47 |
Msa0843220 | Msa1145250 | -0.807174 | 5.750191e-50 | -8.615850e-47 |
Msa0843220 | Msa1151910 | 0.801270 | 9.746758e-49 | -8.615850e-47 |
Msa0843220 | Msa1154710 | 0.809669 | 1.687882e-50 | -8.615850e-47 |
Msa0843220 | Msa1162550 | -0.815338 | 9.727920e-52 | -8.615850e-47 |
Msa0843220 | Msa1168160 | 0.805594 | 1.238284e-49 | -8.615850e-47 |
Msa0843220 | Msa1169710 | 0.809086 | 2.251281e-50 | -8.615850e-47 |
Msa0843220 | Msa1179940 | 0.814281 | 1.668427e-51 | -8.615850e-47 |
Msa0843220 | Msa1179970 | 0.807771 | 4.296262e-50 | -8.615850e-47 |
Msa0843220 | Msa1190400 | 0.807668 | 4.517039e-50 | -8.615850e-47 |
Msa0843220 | Msa1193290 | 0.813261 | 2.799999e-51 | -8.615850e-47 |
Msa0843220 | Msa1199570 | 0.803909 | 2.783833e-49 | -8.615850e-47 |
Msa0843220 | Msa1199830 | -0.810124 | 1.347293e-50 | -8.615850e-47 |
Msa0843220 | Msa1200440 | 0.803339 | 3.654623e-49 | -8.615850e-47 |
Msa0843220 | Msa1213360 | 0.807623 | 4.617783e-50 | -8.615850e-47 |
Msa0843220 | Msa1213420 | 0.820689 | 6.007086e-53 | -8.615850e-47 |
Msa0843220 | Msa1214890 | 0.821723 | 3.468790e-53 | -8.615850e-47 |
Msa0843220 | Msa1218280 | -0.810649 | 1.038051e-50 | -8.615850e-47 |
Msa0843220 | Msa1221060 | 0.808253 | 3.390784e-50 | -8.615850e-47 |
Msa0843220 | Msa1222970 | 0.823616 | 1.258805e-53 | -8.615850e-47 |
Msa0843220 | Msa1228190 | 0.806671 | 7.344510e-50 | -8.615850e-47 |
Msa0843220 | Msa1228210 | 0.814530 | 1.470249e-51 | -8.615850e-47 |
Msa0843220 | Msa1242220 | 0.839971 | 1.151401e-57 | -8.615850e-47 |
Msa0843220 | Msa1242230 | 0.834881 | 2.318976e-56 | -8.615850e-47 |
Msa0843220 | Msa1242240 | 0.822226 | 2.653459e-53 | -8.615850e-47 |
Msa0843220 | Msa1264020 | 0.812264 | 4.626687e-51 | -8.615850e-47 |
Msa0843220 | Msa1270610 | 0.800052 | 1.726875e-48 | -8.615850e-47 |
Msa0843220 | Msa1271280 | 0.809984 | 1.444414e-50 | -8.615850e-47 |
Msa0843220 | Msa1271290 | 0.815249 | 1.018151e-51 | -8.615850e-47 |
Msa0843220 | Msa1271300 | 0.806891 | 6.600577e-50 | -8.615850e-47 |
Msa0843220 | Msa1278840 | 0.829092 | 6.245442e-55 | -8.615850e-47 |
Msa0843220 | Msa1283840 | 0.820310 | 7.338631e-53 | -8.615850e-47 |
Msa0843220 | Msa1283860 | 0.833205 | 6.097099e-56 | -8.615850e-47 |
Msa0843220 | Msa1284260 | 0.821112 | 4.799910e-53 | -8.615850e-47 |
Msa0843220 | Msa1292340 | 0.805150 | 1.534159e-49 | -8.615850e-47 |
Msa0843220 | Msa1293770 | 0.823139 | 1.626334e-53 | -8.615850e-47 |
Msa0843220 | Msa1295450 | 0.800188 | 1.620156e-48 | -8.615850e-47 |
Msa0843220 | Msa1300490 | 0.838981 | 2.081434e-57 | -8.615850e-47 |
Msa0843220 | Msa1303240 | 0.801086 | 1.062792e-48 | -8.615850e-47 |
Msa0843220 | Msa1303250 | 0.827524 | 1.492100e-54 | -8.615850e-47 |
Msa0843220 | Msa1306850 | 0.800949 | 1.133710e-48 | -8.615850e-47 |
Msa0843220 | Msa1308380 | 0.821660 | 3.587953e-53 | -8.615850e-47 |
Msa0843220 | Msa1320740 | 0.808368 | 3.204652e-50 | -8.615850e-47 |
Msa0843220 | Msa1322860 | 0.831819 | 1.344946e-55 | -8.615850e-47 |
Msa0843220 | Msa1322890 | 0.834321 | 3.206591e-56 | -8.615850e-47 |
Msa0843220 | Msa1324550 | 0.800292 | 1.543079e-48 | -8.615850e-47 |
Msa0843220 | Msa1327050 | 0.817776 | 2.767194e-52 | -8.615850e-47 |
Msa0843220 | Msa1328710 | 0.804419 | 2.179697e-49 | -8.615850e-47 |
Msa0843220 | Msa1331910 | 0.813359 | 2.663474e-51 | -8.615850e-47 |
Msa0843220 | Msa1340390 | 0.805618 | 1.223465e-49 | -8.615850e-47 |
Msa0843220 | Msa1346280 | 0.809754 | 1.618272e-50 | -8.615850e-47 |
Msa0843220 | Msa1346370 | 0.806303 | 8.783998e-50 | -8.615850e-47 |
Msa0843220 | Msa1351760 | 0.806247 | 9.023825e-50 | -8.615850e-47 |
Msa0843220 | Msa1357240 | 0.817572 | 3.075624e-52 | -8.615850e-47 |
Msa0843220 | Msa1358280 | 0.805412 | 1.351567e-49 | -8.615850e-47 |
Msa0843220 | Msa1361400 | 0.802629 | 5.124271e-49 | -8.615850e-47 |
Msa0843220 | Msa1361410 | 0.810685 | 1.019304e-50 | -8.615850e-47 |
Msa0843220 | Msa1364470 | -0.808417 | 3.128652e-50 | -8.615850e-47 |
Msa0843220 | Msa1366340 | 0.819083 | 1.398845e-52 | -8.615850e-47 |
Msa0843220 | Msa1367080 | 0.819786 | 9.673592e-53 | -8.615850e-47 |
Msa0843220 | Msa1371960 | 0.814118 | 1.812890e-51 | -8.615850e-47 |
Msa0843220 | Msa1374040 | 0.834896 | 2.299515e-56 | -8.615850e-47 |
Msa0843220 | Msa1374550 | 0.884338 | 2.089327e-71 | -8.615850e-47 |
Msa0843220 | Msa1378760 | 0.801988 | 6.943601e-49 | -8.615850e-47 |
Msa0843220 | Msa1382540 | 0.800757 | 1.240878e-48 | -8.615850e-47 |
Msa0843220 | Msa1390800 | 0.803716 | 3.051972e-49 | -8.615850e-47 |
Msa0843220 | Msa1414930 | 0.818453 | 1.944488e-52 | -8.615850e-47 |
Msa0843220 | Msa1420860 | 0.813136 | 2.981992e-51 | -8.615850e-47 |
Msa0843220 | Msa1430240 | 0.804366 | 2.236086e-49 | -8.615850e-47 |
Msa0843220 | Msa1438250 | 0.807668 | 4.518205e-50 | -8.615850e-47 |
Msa0843220 | Msa1445610 | -0.820710 | 5.940213e-53 | -8.615850e-47 |
Msa0843220 | Msa1461300 | 0.816696 | 4.840581e-52 | -8.615850e-47 |
Msa0843220 | Msa1466540 | 0.802122 | 6.516852e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0843220 | MtrunA17_Chr5g0413871 | 97.534 | 365 | 6 | 2 | 1 | 365 | 1 | 362 | 0.0 | 734 |
Msa0843220 | MtrunA17_Chr1g0152981 | 51.185 | 211 | 80 | 5 | 13 | 217 | 11 | 204 | 6.07e-70 | 222 |
Msa0843220 | MtrunA17_Chr2g0317011 | 38.537 | 205 | 99 | 6 | 14 | 218 | 20 | 197 | 5.18e-36 | 135 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0843220 | AT1G60060.1 | 69.041 | 365 | 63 | 11 | 1 | 337 | 1 | 343 | 2.02e-160 | 455 |
Msa0843220 | AT1G60060.2 | 64.688 | 320 | 63 | 11 | 46 | 337 | 6 | 303 | 5.40e-124 | 361 |
Msa0843220 | AT5G53900.2 | 38.333 | 240 | 118 | 7 | 14 | 244 | 21 | 239 | 9.42e-39 | 142 |
Msa0843220 | AT3G15240.2 | 37.073 | 205 | 107 | 4 | 14 | 218 | 34 | 216 | 1.00e-37 | 139 |
Msa0843220 | AT5G53900.3 | 39.844 | 128 | 67 | 2 | 126 | 244 | 1 | 127 | 2.69e-20 | 89.7 |
Msa0843220 | AT5G53900.1 | 39.844 | 128 | 67 | 2 | 126 | 244 | 1 | 127 | 2.69e-20 | 89.7 |
Msa0843220 | AT2G31280.1 | 30.928 | 194 | 83 | 9 | 15 | 207 | 6 | 149 | 1.78e-14 | 75.5 |
Msa0843220 | AT2G31280.3 | 30.928 | 194 | 83 | 9 | 15 | 207 | 6 | 149 | 1.88e-14 | 75.1 |
Msa0843220 | AT2G27230.2 | 27.488 | 211 | 105 | 8 | 13 | 218 | 4 | 171 | 2.94e-13 | 71.6 |
Msa0843220 | AT2G27230.1 | 27.488 | 211 | 105 | 8 | 13 | 218 | 4 | 171 | 2.94e-13 | 71.6 |
Find 101 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTAGCTCATCATCAGTTTA+TGG | 0.128324 | 5_4:-20789899 | Msa0843220:CDS |
ATAAAATAATTAATAATTAT+TGG | 0.163550 | 5_4:+20787961 | None:intergenic |
CAATCACCGGTGTTTATTTC+AGG | 0.209024 | 5_4:+20789923 | None:intergenic |
TGCATATTTCAGTTTCTTCT+TGG | 0.255252 | 5_4:-20788178 | Msa0843220:three_prime_UTR |
TCACATGAGATCTATAACTA+TGG | 0.263874 | 5_4:-20789818 | Msa0843220:CDS |
CACACATTTGCATGGAATAA+TGG | 0.268865 | 5_4:+20788120 | None:intergenic |
TTGGGTGGAGGGTAGTTTCT+AGG | 0.275012 | 5_4:+20790398 | None:intergenic |
AACACAAACACAACATGTTT+TGG | 0.280192 | 5_4:-20788529 | Msa0843220:CDS |
AGAGAAGGTGTTGTTCAATT+AGG | 0.283607 | 5_4:-20789256 | Msa0843220:CDS |
AAATTAATTTCTTGATCATT+AGG | 0.297602 | 5_4:+20789634 | None:intergenic |
AATGGATCAAATAATAATAA+TGG | 0.318152 | 5_4:-20788330 | Msa0843220:CDS |
TATATGCATGCACAGGATAT+TGG | 0.324411 | 5_4:-20789987 | Msa0843220:intron |
CATTTCCAAGATGATCTTGA+TGG | 0.328838 | 5_4:+20788349 | None:intergenic |
AGGATATTGGTTTGGGAAGA+TGG | 0.329021 | 5_4:-20789974 | Msa0843220:CDS |
TCTTGAAACCCTTTAGCTAT+AGG | 0.329720 | 5_4:+20790630 | None:intergenic |
ATTGATGGAGTTACTTTCAT+TGG | 0.336300 | 5_4:+20788618 | None:intergenic |
CATCAAGATCATCTTGGAAA+TGG | 0.346285 | 5_4:-20788348 | Msa0843220:CDS |
TCAGTTCTTGTCTGGTATAA+AGG | 0.362612 | 5_4:-20789429 | Msa0843220:intron |
CTAGCTCCTGCTGCTGTTCA+AGG | 0.368140 | 5_4:-20788005 | Msa0843220:three_prime_UTR |
CAAAGAGCATTGGAATTTAC+CGG | 0.375355 | 5_4:-20788492 | Msa0843220:CDS |
CCAATCTACCACATTGTACT+TGG | 0.379695 | 5_4:-20788042 | Msa0843220:three_prime_UTR |
GCATGCACAGGATATTGGTT+TGG | 0.384339 | 5_4:-20789982 | Msa0843220:intron |
TCACCAACATCAAGTTGTTC+AGG | 0.392523 | 5_4:+20788411 | None:intergenic |
GACATCTTGAAGAAAAGTTC+AGG | 0.396788 | 5_4:+20789839 | None:intergenic |
CATGCACAGGATATTGGTTT+GGG | 0.400265 | 5_4:-20789981 | Msa0843220:intron |
TCATCATCAGCATACCCTTA+TGG | 0.403770 | 5_4:-20788735 | Msa0843220:CDS |
TAAAGATACCTATAGCTAAA+GGG | 0.404162 | 5_4:-20790638 | Msa0843220:five_prime_UTR |
GTTGGTGTGTGCTTATATAA+AGG | 0.405928 | 5_4:-20790692 | Msa0843220:five_prime_UTR |
GCTTCAAGACTACTCATTGA+TGG | 0.406362 | 5_4:+20788603 | None:intergenic |
TTAAAGATACCTATAGCTAA+AGG | 0.409220 | 5_4:-20790639 | Msa0843220:five_prime_UTR |
TGGGAAGCTCAGTTCTTGTC+TGG | 0.414012 | 5_4:-20789437 | Msa0843220:CDS |
CTAGCTCATCATCAGTTTAT+GGG | 0.418675 | 5_4:-20789898 | Msa0843220:CDS |
CTCTCTCACTACAATATGTT+AGG | 0.427654 | 5_4:+20788246 | None:intergenic |
TAGGTATCTTTAATAATAGT+AGG | 0.427738 | 5_4:+20790649 | None:intergenic |
TAAATGTGATATTTCCTTGT+TGG | 0.431856 | 5_4:-20790710 | Msa0843220:five_prime_UTR |
CATTTCCATCAAGATCATCT+TGG | 0.434289 | 5_4:-20788354 | Msa0843220:CDS |
TTTACAGCACCCTAGGACTT+GGG | 0.440440 | 5_4:-20789456 | Msa0843220:intron |
CAAGAGGAAACAGAAGGAAT+TGG | 0.444449 | 5_4:-20790129 | Msa0843220:intron |
TGTTCTGATGGACCACCATA+AGG | 0.450763 | 5_4:+20788720 | None:intergenic |
GGTAGTGTATTGTAGTATGA+AGG | 0.452877 | 5_4:-20788157 | Msa0843220:three_prime_UTR |
ATTGTAGTGAGAGAGTTGTT+AGG | 0.462280 | 5_4:-20788238 | Msa0843220:three_prime_UTR |
CCAAGTACAATGTGGTAGAT+TGG | 0.469859 | 5_4:+20788042 | None:intergenic |
GAACAATGGCACAACTTTCA+AGG | 0.484632 | 5_4:-20788702 | Msa0843220:CDS |
GTTGGATAATGAAGAAGAAG+AGG | 0.487343 | 5_4:-20788442 | Msa0843220:CDS |
AACTGAGCTTCCCAAGTCCT+AGG | 0.490005 | 5_4:+20789446 | None:intergenic |
AGCTACATTGAAAGCATACC+AGG | 0.501005 | 5_4:-20788777 | Msa0843220:CDS |
GTTCTGATGGACCACCATAA+GGG | 0.509808 | 5_4:+20788721 | None:intergenic |
GAGATCTATAACTATGGAGA+AGG | 0.511952 | 5_4:-20789812 | Msa0843220:CDS |
TAATATAGGTGGGAAGGACA+AGG | 0.515798 | 5_4:-20790166 | Msa0843220:intron |
TAAGGGTATGCTGATGATGA+TGG | 0.520173 | 5_4:+20788738 | None:intergenic |
AAAAGTTGCGAAAGAAGAGT+TGG | 0.521509 | 5_4:-20788460 | Msa0843220:CDS |
AAGTTGTGCCATTGTTCTGA+TGG | 0.534050 | 5_4:+20788708 | None:intergenic |
ACAATCTTCACACATTTGCA+TGG | 0.536085 | 5_4:+20788112 | None:intergenic |
GGAAGAACATCTTACTCCAT+TGG | 0.536644 | 5_4:-20790510 | Msa0843220:CDS |
CTTGATGGAAATGATGTTGA+TGG | 0.536878 | 5_4:+20788364 | None:intergenic |
TCAGGTTGAAGACCTTGGTA+AGG | 0.540371 | 5_4:+20789857 | None:intergenic |
TTGCATCCTTGAACAGCAGC+AGG | 0.542861 | 5_4:+20787999 | None:intergenic |
CCATAAACTGATGATGAGCT+AGG | 0.545039 | 5_4:+20789899 | None:intergenic |
ACAACAACAACAAAGAGCAT+TGG | 0.547643 | 5_4:-20788502 | Msa0843220:CDS |
GGGTGTGGAAGTAGCACTCC+TGG | 0.547961 | 5_4:+20788759 | None:intergenic |
AAAGTTCAGGTTGAAGACCT+TGG | 0.548638 | 5_4:+20789852 | None:intergenic |
GTGCTTATATAAAGGAGGAT+AGG | 0.553115 | 5_4:-20790684 | Msa0843220:five_prime_UTR |
AAATTAATTTCTTGTCAGCA+TGG | 0.554884 | 5_4:-20789621 | Msa0843220:CDS |
ACCTTCTCTAACAGCAATGA+GGG | 0.566133 | 5_4:+20789270 | None:intergenic |
GAGAGTAGTAGTTCAATACC+AGG | 0.567679 | 5_4:-20788390 | Msa0843220:CDS |
CACCCACCTAAATAAAATGA+GGG | 0.571153 | 5_4:-20790743 | None:intergenic |
AGAAGATGAGTAACAGCCAA+TGG | 0.572438 | 5_4:+20790494 | None:intergenic |
GTAGTGTATTGTAGTATGAA+GGG | 0.572719 | 5_4:-20788156 | Msa0843220:three_prime_UTR |
AGGTATCTTTAATAATAGTA+GGG | 0.573912 | 5_4:+20790650 | None:intergenic |
CTGCAGATCATAGTCACAAG+TGG | 0.577564 | 5_4:-20789669 | Msa0843220:CDS |
ACAGCAGCAGGAGCTAGCAT+TGG | 0.582155 | 5_4:+20788011 | None:intergenic |
TATGCTGATGATGATGGGTG+TGG | 0.582762 | 5_4:+20788744 | None:intergenic |
AATATAGGTGGGAAGGACAA+GGG | 0.583406 | 5_4:-20790165 | Msa0843220:intron |
ACTGAGCTTCCCAAGTCCTA+GGG | 0.584163 | 5_4:+20789447 | None:intergenic |
CATCCATGAAAATTCTCAGT+GGG | 0.589081 | 5_4:-20790447 | Msa0843220:CDS |
CACCTTCTCTAACAGCAATG+AGG | 0.591099 | 5_4:+20789269 | None:intergenic |
GGGGCTTATGATAGATCAAG+AGG | 0.592698 | 5_4:-20790145 | Msa0843220:CDS |
GCCCTCATTGCTGTTAGAGA+AGG | 0.593948 | 5_4:-20789271 | Msa0843220:CDS |
AGCATTGCACCACAGCATCA+AGG | 0.600171 | 5_4:-20788678 | Msa0843220:CDS |
ATATAGGTGGGAAGGACAAG+GGG | 0.604756 | 5_4:-20790164 | Msa0843220:intron |
TGTTGTGGTGGAACAACTGA+AGG | 0.615956 | 5_4:+20788564 | None:intergenic |
AGATCTATAACTATGGAGAA+GGG | 0.626888 | 5_4:-20789811 | Msa0843220:intron |
TCAATTAGGAGCTGTTCACA+AGG | 0.628502 | 5_4:-20789242 | Msa0843220:intron |
ATAGATCAAGAGGAAACAGA+AGG | 0.628702 | 5_4:-20790135 | Msa0843220:CDS |
TGTGTATAATATAGGTGGGA+AGG | 0.629661 | 5_4:-20790172 | Msa0843220:intron |
AAGGGTATGCTGATGATGAT+GGG | 0.632300 | 5_4:+20788739 | None:intergenic |
TGATGAGCTAGGACAATCAC+CGG | 0.633783 | 5_4:+20789910 | None:intergenic |
AATTGATCACCTTGATGCTG+TGG | 0.645054 | 5_4:+20788669 | None:intergenic |
AGACCTGAACAACTTGATGT+TGG | 0.656658 | 5_4:-20788414 | Msa0843220:CDS |
TATATAAGCACACACCAACA+AGG | 0.657069 | 5_4:+20790696 | None:intergenic |
ATGGTGGTCCATCAGAACAA+TGG | 0.666115 | 5_4:-20788716 | Msa0843220:CDS |
GATTGAAGACTTGAGCTATG+TGG | 0.668398 | 5_4:-20788820 | Msa0843220:CDS |
GGTGTGTGCTTATATAAAGG+AGG | 0.669304 | 5_4:-20790689 | Msa0843220:five_prime_UTR |
TCATCAGCATACCCTTATGG+TGG | 0.673613 | 5_4:-20788732 | Msa0843220:CDS |
AAATGATGTTGATGGTACCC+TGG | 0.680740 | 5_4:+20788372 | None:intergenic |
GAACTAATTCAACCTTACCA+AGG | 0.681689 | 5_4:-20789869 | Msa0843220:CDS |
ACCCACCTAAATAAAATGAG+GGG | 0.695884 | 5_4:-20790742 | None:intergenic |
GCATCCATGAAAATTCTCAG+TGG | 0.713658 | 5_4:-20790448 | Msa0843220:CDS |
AGAGTAGTAGTTCAATACCA+GGG | 0.726230 | 5_4:-20788389 | Msa0843220:CDS |
GCAGCACCTGAAATAAACAC+CGG | 0.739013 | 5_4:-20789929 | Msa0843220:CDS |
ATGTTGATCCAAGTACAATG+TGG | 0.823704 | 5_4:+20788034 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAATAATTAATAATTAT+TGG | + | chr5_4:20790688-20790707 | None:intergenic | 0.0% |
!!! | TGAGAATTTTATTTTATATA+TGG | - | chr5_4:20788115-20788134 | Msa0843220:three_prime_UTR | 10.0% |
!! | ACTTGATTATAAAAAAAAAA+TGG | - | chr5_4:20788568-20788587 | Msa0843220:CDS | 10.0% |
!!! | TATTAGTTAATTAGATTTTA+TGG | - | chr5_4:20788932-20788951 | Msa0843220:intron | 10.0% |
!! | AATTGAATTAAATTAAAGAA+AGG | + | chr5_4:20789327-20789346 | None:intergenic | 10.0% |
!! | AAATTAATTTCTTGATCATT+AGG | + | chr5_4:20789015-20789034 | None:intergenic | 15.0% |
!! | AATGGATCAAATAATAATAA+TGG | - | chr5_4:20790316-20790335 | Msa0843220:intron | 15.0% |
!! | AGGTATCTTTAATAATAGTA+GGG | + | chr5_4:20787999-20788018 | None:intergenic | 20.0% |
!! | TAGGTATCTTTAATAATAGT+AGG | + | chr5_4:20788000-20788019 | None:intergenic | 20.0% |
!!! | ATTTTGTGTGTGTATAATAT+AGG | - | chr5_4:20788466-20788485 | Msa0843220:CDS | 20.0% |
!!! | GAAGTTTTATTTAAGCAAAT+AGG | - | chr5_4:20788907-20788926 | Msa0843220:intron | 20.0% |
!! | CTGGTAATAATTTAAGAAAA+TGG | + | chr5_4:20789598-20789617 | None:intergenic | 20.0% |
!!! | AATGTTTTAAGAAAAATGTC+CGG | + | chr5_4:20789738-20789757 | None:intergenic | 20.0% |
! | TAAATGTGATATTTCCTTGT+TGG | - | chr5_4:20787936-20787955 | Msa0843220:three_prime_UTR | 25.0% |
! | TTAAAGATACCTATAGCTAA+AGG | - | chr5_4:20788007-20788026 | Msa0843220:three_prime_UTR | 25.0% |
! | TAAAGATACCTATAGCTAAA+GGG | - | chr5_4:20788008-20788027 | Msa0843220:three_prime_UTR | 25.0% |
!! | TTGCTATGATTTTCTTACTT+GGG | + | chr5_4:20788269-20788288 | None:intergenic | 25.0% |
!!! | TTTGCTATGATTTTCTTACT+TGG | + | chr5_4:20788270-20788289 | None:intergenic | 25.0% |
!! | TTAATTAGATTTTATGGAGC+AGG | - | chr5_4:20788938-20788957 | Msa0843220:intron | 25.0% |
! | AAATTAATTTCTTGTCAGCA+TGG | - | chr5_4:20789025-20789044 | Msa0843220:intron | 25.0% |
! | GAAATCATTCTATCTATTTC+AGG | + | chr5_4:20789169-20789188 | None:intergenic | 25.0% |
!!! | ATGTTTTAAGAAAAATGTCC+GGG | + | chr5_4:20789737-20789756 | None:intergenic | 25.0% |
!! | TCAATCAAATTTTGTCTCTA+TGG | - | chr5_4:20789793-20789812 | Msa0843220:intron | 25.0% |
!! | TTTTGTCTCTATGGAATTTA+AGG | - | chr5_4:20789802-20789821 | Msa0843220:intron | 25.0% |
!!! | GTTTGATTTTGAATTTGTTG+TGG | + | chr5_4:20790100-20790119 | None:intergenic | 25.0% |
TTGTGTGTGTATAATATAGG+TGG | - | chr5_4:20788469-20788488 | Msa0843220:CDS | 30.0% | |
TGTGTGTGTATAATATAGGT+GGG | - | chr5_4:20788470-20788489 | Msa0843220:CDS | 30.0% | |
TCACATGAGATCTATAACTA+TGG | - | chr5_4:20788828-20788847 | Msa0843220:intron | 30.0% | |
AGATCTATAACTATGGAGAA+GGG | - | chr5_4:20788835-20788854 | Msa0843220:intron | 30.0% | |
GAGATATACTATGTGAATGA+GGG | + | chr5_4:20789277-20789296 | None:intergenic | 30.0% | |
AGAGATATACTATGTGAATG+AGG | + | chr5_4:20789278-20789297 | None:intergenic | 30.0% | |
! | TTTCAGATTTAAGACGTGTT+TGG | - | chr5_4:20789507-20789526 | Msa0843220:intron | 30.0% |
!!! | TGTAGCTGAACTTTTTTCTT+AGG | + | chr5_4:20789856-20789875 | None:intergenic | 30.0% |
! | ATTGATGGAGTTACTTTCAT+TGG | + | chr5_4:20790031-20790050 | None:intergenic | 30.0% |
!!! | TGATTTTGAATTTGTTGTGG+TGG | + | chr5_4:20790097-20790116 | None:intergenic | 30.0% |
! | AACACAAACACAACATGTTT+TGG | - | chr5_4:20790117-20790136 | Msa0843220:intron | 30.0% |
TGCATATTTCAGTTTCTTCT+TGG | - | chr5_4:20790468-20790487 | Msa0843220:CDS | 30.0% | |
GTAGTGTATTGTAGTATGAA+GGG | - | chr5_4:20790490-20790509 | Msa0843220:CDS | 30.0% | |
TATATAAGCACACACCAACA+AGG | + | chr5_4:20787953-20787972 | None:intergenic | 35.0% | |
GTTGGTGTGTGCTTATATAA+AGG | - | chr5_4:20787954-20787973 | Msa0843220:three_prime_UTR | 35.0% | |
GTGCTTATATAAAGGAGGAT+AGG | - | chr5_4:20787962-20787981 | Msa0843220:three_prime_UTR | 35.0% | |
TCTTGAAACCCTTTAGCTAT+AGG | + | chr5_4:20788019-20788038 | None:intergenic | 35.0% | |
CATCCATGAAAATTCTCAGT+GGG | - | chr5_4:20788199-20788218 | Msa0843220:three_prime_UTR | 35.0% | |
! | AAACCCACTGAGAATTTTCA+TGG | + | chr5_4:20788205-20788224 | None:intergenic | 35.0% |
! | CTATGATTTTCTTACTTGGG+TGG | + | chr5_4:20788266-20788285 | None:intergenic | 35.0% |
TGTGTATAATATAGGTGGGA+AGG | - | chr5_4:20788474-20788493 | Msa0843220:CDS | 35.0% | |
ATAGATCAAGAGGAAACAGA+AGG | - | chr5_4:20788511-20788530 | Msa0843220:CDS | 35.0% | |
TCTATGTTATATGCATGCAC+AGG | - | chr5_4:20788652-20788671 | Msa0843220:CDS | 35.0% | |
TATATGCATGCACAGGATAT+TGG | - | chr5_4:20788659-20788678 | Msa0843220:CDS | 35.0% | |
CTAGCTCATCATCAGTTTAT+GGG | - | chr5_4:20788748-20788767 | Msa0843220:CDS | 35.0% | |
GAACTAATTCAACCTTACCA+AGG | - | chr5_4:20788777-20788796 | Msa0843220:CDS | 35.0% | |
GACATCTTGAAGAAAAGTTC+AGG | + | chr5_4:20788810-20788829 | None:intergenic | 35.0% | |
GAGATCTATAACTATGGAGA+AGG | - | chr5_4:20788834-20788853 | Msa0843220:intron | 35.0% | |
!!! | ATTTTATGGAGCAGGTTGAT+TGG | - | chr5_4:20788946-20788965 | Msa0843220:intron | 35.0% |
TCAGTTCTTGTCTGGTATAA+AGG | - | chr5_4:20789217-20789236 | Msa0843220:intron | 35.0% | |
!! | AGAGAAGGTGTTGTTCAATT+AGG | - | chr5_4:20789390-20789409 | Msa0843220:intron | 35.0% |
ACCAGTATTAGTGTTGTGTT+CGG | - | chr5_4:20789613-20789632 | Msa0843220:CDS | 35.0% | |
AACCACAATCATGTTGCAAT+CGG | - | chr5_4:20789671-20789690 | Msa0843220:CDS | 35.0% | |
! | ACAACAACAACAAAGAGCAT+TGG | - | chr5_4:20790144-20790163 | Msa0843220:CDS | 35.0% |
!! | CAAAGAGCATTGGAATTTAC+CGG | - | chr5_4:20790154-20790173 | Msa0843220:CDS | 35.0% |
AAAAGTTGCGAAAGAAGAGT+TGG | - | chr5_4:20790186-20790205 | Msa0843220:intron | 35.0% | |
GTTGGATAATGAAGAAGAAG+AGG | - | chr5_4:20790204-20790223 | Msa0843220:intron | 35.0% | |
AGAGTAGTAGTTCAATACCA+GGG | - | chr5_4:20790257-20790276 | Msa0843220:intron | 35.0% | |
CTTGATGGAAATGATGTTGA+TGG | + | chr5_4:20790285-20790304 | None:intergenic | 35.0% | |
CATTTCCATCAAGATCATCT+TGG | - | chr5_4:20790292-20790311 | Msa0843220:intron | 35.0% | |
CATTTCCAAGATGATCTTGA+TGG | + | chr5_4:20790300-20790319 | None:intergenic | 35.0% | |
CATCAAGATCATCTTGGAAA+TGG | - | chr5_4:20790298-20790317 | Msa0843220:intron | 35.0% | |
CTCTCTCACTACAATATGTT+AGG | + | chr5_4:20790403-20790422 | None:intergenic | 35.0% | |
ATTGTAGTGAGAGAGTTGTT+AGG | - | chr5_4:20790408-20790427 | Msa0843220:CDS | 35.0% | |
GGTAGTGTATTGTAGTATGA+AGG | - | chr5_4:20790489-20790508 | Msa0843220:CDS | 35.0% | |
CACACATTTGCATGGAATAA+TGG | + | chr5_4:20790529-20790548 | None:intergenic | 35.0% | |
ACAATCTTCACACATTTGCA+TGG | + | chr5_4:20790537-20790556 | None:intergenic | 35.0% | |
ATGTTGATCCAAGTACAATG+TGG | + | chr5_4:20790615-20790634 | None:intergenic | 35.0% | |
GGTGTGTGCTTATATAAAGG+AGG | - | chr5_4:20787957-20787976 | Msa0843220:three_prime_UTR | 40.0% | |
GGAAGAACATCTTACTCCAT+TGG | - | chr5_4:20788136-20788155 | Msa0843220:three_prime_UTR | 40.0% | |
AGAAGATGAGTAACAGCCAA+TGG | + | chr5_4:20788155-20788174 | None:intergenic | 40.0% | |
GCATCCATGAAAATTCTCAG+TGG | - | chr5_4:20788198-20788217 | Msa0843220:three_prime_UTR | 40.0% | |
!!! | AGTGGGTTTATGCTGTTTTC+TGG | - | chr5_4:20788216-20788235 | Msa0843220:three_prime_UTR | 40.0% |
! | GATTTTCTTACTTGGGTGGA+GGG | + | chr5_4:20788262-20788281 | None:intergenic | 40.0% |
! | TGATTTTCTTACTTGGGTGG+AGG | + | chr5_4:20788263-20788282 | None:intergenic | 40.0% |
TAATATAGGTGGGAAGGACA+AGG | - | chr5_4:20788480-20788499 | Msa0843220:CDS | 40.0% | |
AATATAGGTGGGAAGGACAA+GGG | - | chr5_4:20788481-20788500 | Msa0843220:CDS | 40.0% | |
CAAGAGGAAACAGAAGGAAT+TGG | - | chr5_4:20788517-20788536 | Msa0843220:CDS | 40.0% | |
!! | CATGCACAGGATATTGGTTT+GGG | - | chr5_4:20788665-20788684 | Msa0843220:CDS | 40.0% |
!! | AGGATATTGGTTTGGGAAGA+TGG | - | chr5_4:20788672-20788691 | Msa0843220:CDS | 40.0% |
CAATCACCGGTGTTTATTTC+AGG | + | chr5_4:20788726-20788745 | None:intergenic | 40.0% | |
! | CCATAAACTGATGATGAGCT+AGG | + | chr5_4:20788750-20788769 | None:intergenic | 40.0% |
CCTAGCTCATCATCAGTTTA+TGG | - | chr5_4:20788747-20788766 | Msa0843220:CDS | 40.0% | |
!! | AAAGTTCAGGTTGAAGACCT+TGG | + | chr5_4:20788797-20788816 | None:intergenic | 40.0% |
! | GATTTCTTTTACAGCACCCT+AGG | - | chr5_4:20789183-20789202 | Msa0843220:intron | 40.0% |
ACCTTCTCTAACAGCAATGA+GGG | + | chr5_4:20789379-20789398 | None:intergenic | 40.0% | |
TCAATTAGGAGCTGTTCACA+AGG | - | chr5_4:20789404-20789423 | Msa0843220:intron | 40.0% | |
AGAGAGAGAGAGAGAACAAA+GGG | + | chr5_4:20789441-20789460 | None:intergenic | 40.0% | |
! | TTTAAGACGTGTTTGGAGTC+CGG | - | chr5_4:20789514-20789533 | Msa0843220:intron | 40.0% |
TGTTAGACACCAATGTAAGC+CGG | + | chr5_4:20789536-20789555 | None:intergenic | 40.0% | |
ACCGAACACAACACTAATAC+TGG | + | chr5_4:20789617-20789636 | None:intergenic | 40.0% | |
GGTGCTTGTATGTGTTTCAT+AGG | - | chr5_4:20789634-20789653 | Msa0843220:CDS | 40.0% | |
GATTGAAGACTTGAGCTATG+TGG | - | chr5_4:20789826-20789845 | Msa0843220:CDS | 40.0% | |
! | AGCTACATTGAAAGCATACC+AGG | - | chr5_4:20789869-20789888 | Msa0843220:CDS | 40.0% |
! | AAGGGTATGCTGATGATGAT+GGG | + | chr5_4:20789910-20789929 | None:intergenic | 40.0% |
! | TAAGGGTATGCTGATGATGA+TGG | + | chr5_4:20789911-20789930 | None:intergenic | 40.0% |
TCATCATCAGCATACCCTTA+TGG | - | chr5_4:20789911-20789930 | Msa0843220:CDS | 40.0% | |
! | AAGTTGTGCCATTGTTCTGA+TGG | + | chr5_4:20789941-20789960 | None:intergenic | 40.0% |
GAACAATGGCACAACTTTCA+AGG | - | chr5_4:20789944-20789963 | Msa0843220:CDS | 40.0% | |
AATTGATCACCTTGATGCTG+TGG | + | chr5_4:20789980-20789999 | None:intergenic | 40.0% | |
GCTTCAAGACTACTCATTGA+TGG | + | chr5_4:20790046-20790065 | None:intergenic | 40.0% | |
! | CGCAACTTTTTGCATTCTTC+CGG | + | chr5_4:20790176-20790195 | None:intergenic | 40.0% |
AGACCTGAACAACTTGATGT+TGG | - | chr5_4:20790232-20790251 | Msa0843220:intron | 40.0% | |
! | TCACCAACATCAAGTTGTTC+AGG | + | chr5_4:20790238-20790257 | None:intergenic | 40.0% |
GAGAGTAGTAGTTCAATACC+AGG | - | chr5_4:20790256-20790275 | Msa0843220:intron | 40.0% | |
!! | AAATGATGTTGATGGTACCC+TGG | + | chr5_4:20790277-20790296 | None:intergenic | 40.0% |
CCAAGTACAATGTGGTAGAT+TGG | + | chr5_4:20790607-20790626 | None:intergenic | 40.0% | |
CCAATCTACCACATTGTACT+TGG | - | chr5_4:20790604-20790623 | Msa0843220:five_prime_UTR | 40.0% | |
!!! | GGGTTTATGCTGTTTTCTGG+AGG | - | chr5_4:20788219-20788238 | Msa0843220:three_prime_UTR | 45.0% |
ATATAGGTGGGAAGGACAAG+GGG | - | chr5_4:20788482-20788501 | Msa0843220:CDS | 45.0% | |
GGGGCTTATGATAGATCAAG+AGG | - | chr5_4:20788501-20788520 | Msa0843220:CDS | 45.0% | |
! | GCATGCACAGGATATTGGTT+TGG | - | chr5_4:20788664-20788683 | Msa0843220:CDS | 45.0% |
GCAGCACCTGAAATAAACAC+CGG | - | chr5_4:20788717-20788736 | Msa0843220:CDS | 45.0% | |
TGATGAGCTAGGACAATCAC+CGG | + | chr5_4:20788739-20788758 | None:intergenic | 45.0% | |
!! | TCAGGTTGAAGACCTTGGTA+AGG | + | chr5_4:20788792-20788811 | None:intergenic | 45.0% |
CTGCAGATCATAGTCACAAG+TGG | - | chr5_4:20788977-20788996 | Msa0843220:intron | 45.0% | |
! | TTTTACAGCACCCTAGGACT+TGG | - | chr5_4:20789189-20789208 | Msa0843220:intron | 45.0% |
TTTACAGCACCCTAGGACTT+GGG | - | chr5_4:20789190-20789209 | Msa0843220:intron | 45.0% | |
CACCTTCTCTAACAGCAATG+AGG | + | chr5_4:20789380-20789399 | None:intergenic | 45.0% | |
GAGAGAGAGAGAGAGAACAA+AGG | + | chr5_4:20789442-20789461 | None:intergenic | 45.0% | |
CTCCGATTGCAACATGATTG+TGG | + | chr5_4:20789676-20789695 | None:intergenic | 45.0% | |
TCATAGATCAGTCGCATTCC+CGG | - | chr5_4:20789716-20789735 | Msa0843220:intron | 45.0% | |
!! | TATGCTGATGATGATGGGTG+TGG | + | chr5_4:20789905-20789924 | None:intergenic | 45.0% |
TCATCAGCATACCCTTATGG+TGG | - | chr5_4:20789914-20789933 | Msa0843220:CDS | 45.0% | |
! | GTTCTGATGGACCACCATAA+GGG | + | chr5_4:20789928-20789947 | None:intergenic | 45.0% |
! | TGTTCTGATGGACCACCATA+AGG | + | chr5_4:20789929-20789948 | None:intergenic | 45.0% |
ATGGTGGTCCATCAGAACAA+TGG | - | chr5_4:20789930-20789949 | Msa0843220:CDS | 45.0% | |
! | TGTTGTGGTGGAACAACTGA+AGG | + | chr5_4:20790085-20790104 | None:intergenic | 45.0% |
!! | TATATATATATATATATATG+AGG | - | chr5_4:20788373-20788392 | Msa0843220:CDS | 5.0% |
TTGGGTGGAGGGTAGTTTCT+AGG | + | chr5_4:20788251-20788270 | None:intergenic | 50.0% | |
ACTGAGCTTCCCAAGTCCTA+GGG | + | chr5_4:20789202-20789221 | None:intergenic | 50.0% | |
AACTGAGCTTCCCAAGTCCT+AGG | + | chr5_4:20789203-20789222 | None:intergenic | 50.0% | |
TGGGAAGCTCAGTTCTTGTC+TGG | - | chr5_4:20789209-20789228 | Msa0843220:intron | 50.0% | |
! | GCCCTCATTGCTGTTAGAGA+AGG | - | chr5_4:20789375-20789394 | Msa0843220:intron | 50.0% |
! | GTTTGGAGTCCGGCTTACAT+TGG | - | chr5_4:20789524-20789543 | Msa0843220:intron | 50.0% |
AGCATTGCACCACAGCATCA+AGG | - | chr5_4:20789968-20789987 | Msa0843220:CDS | 50.0% | |
TTGCATCCTTGAACAGCAGC+AGG | + | chr5_4:20790650-20790669 | None:intergenic | 50.0% | |
ACAGCAGCAGGAGCTAGCAT+TGG | + | chr5_4:20790638-20790657 | None:intergenic | 55.0% | |
CTAGCTCCTGCTGCTGTTCA+AGG | - | chr5_4:20790641-20790660 | Msa0843220:five_prime_UTR | 55.0% | |
GGGTGTGGAAGTAGCACTCC+TGG | + | chr5_4:20789890-20789909 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 20787918 | 20790750 | 20787918 | ID=Msa0843220;Name=Msa0843220 |
chr5_4 | mRNA | 20787918 | 20790750 | 20787918 | ID=Msa0843220-mRNA-1;Parent=Msa0843220;Name=Msa0843220-mRNA-1;_AED=0.16;_eAED=0.16;_QI=216|1|1|1|1|1|7|405|365 |
chr5_4 | exon | 20787918 | 20788844 | 20787918 | ID=Msa0843220-mRNA-1:exon:8638;Parent=Msa0843220-mRNA-1 |
chr5_4 | exon | 20789243 | 20789299 | 20789243 | ID=Msa0843220-mRNA-1:exon:8637;Parent=Msa0843220-mRNA-1 |
chr5_4 | exon | 20789430 | 20789471 | 20789430 | ID=Msa0843220-mRNA-1:exon:8636;Parent=Msa0843220-mRNA-1 |
chr5_4 | exon | 20789603 | 20789708 | 20789603 | ID=Msa0843220-mRNA-1:exon:8635;Parent=Msa0843220-mRNA-1 |
chr5_4 | exon | 20789812 | 20789994 | 20789812 | ID=Msa0843220-mRNA-1:exon:8634;Parent=Msa0843220-mRNA-1 |
chr5_4 | exon | 20790130 | 20790180 | 20790130 | ID=Msa0843220-mRNA-1:exon:8633;Parent=Msa0843220-mRNA-1 |
chr5_4 | exon | 20790398 | 20790750 | 20790398 | ID=Msa0843220-mRNA-1:exon:8632;Parent=Msa0843220-mRNA-1 |
chr5_4 | five_prime_UTR | 20790535 | 20790750 | 20790535 | ID=Msa0843220-mRNA-1:five_prime_utr;Parent=Msa0843220-mRNA-1 |
chr5_4 | CDS | 20790398 | 20790534 | 20790398 | ID=Msa0843220-mRNA-1:cds;Parent=Msa0843220-mRNA-1 |
chr5_4 | CDS | 20790130 | 20790180 | 20790130 | ID=Msa0843220-mRNA-1:cds;Parent=Msa0843220-mRNA-1 |
chr5_4 | CDS | 20789812 | 20789994 | 20789812 | ID=Msa0843220-mRNA-1:cds;Parent=Msa0843220-mRNA-1 |
chr5_4 | CDS | 20789603 | 20789708 | 20789603 | ID=Msa0843220-mRNA-1:cds;Parent=Msa0843220-mRNA-1 |
chr5_4 | CDS | 20789430 | 20789471 | 20789430 | ID=Msa0843220-mRNA-1:cds;Parent=Msa0843220-mRNA-1 |
chr5_4 | CDS | 20789243 | 20789299 | 20789243 | ID=Msa0843220-mRNA-1:cds;Parent=Msa0843220-mRNA-1 |
chr5_4 | CDS | 20788323 | 20788844 | 20788323 | ID=Msa0843220-mRNA-1:cds;Parent=Msa0843220-mRNA-1 |
chr5_4 | three_prime_UTR | 20787918 | 20788322 | 20787918 | ID=Msa0843220-mRNA-1:three_prime_utr;Parent=Msa0843220-mRNA-1 |
Gene Sequence |
Protein sequence |