Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0407920 | XP_024634879.1 | 83.040 | 454 | 57 | 3 | 1 | 442 | 335 | 780 | 0.0 | 766 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0407920 | A0A396IRE0 | 89.275 | 345 | 27 | 1 | 108 | 442 | 1 | 345 | 0.0 | 639 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004640 | Msa0407920 | 0.802994 | 4.307268e-49 | -8.615850e-47 |
| Msa0004880 | Msa0407920 | 0.820535 | 6.517318e-53 | -8.615850e-47 |
| Msa0012060 | Msa0407920 | 0.812235 | 4.695437e-51 | -8.615850e-47 |
| Msa0017510 | Msa0407920 | 0.874938 | 4.564743e-68 | -8.615850e-47 |
| Msa0029880 | Msa0407920 | 0.809709 | 1.655161e-50 | -8.615850e-47 |
| Msa0029910 | Msa0407920 | 0.819599 | 1.067133e-52 | -8.615850e-47 |
| Msa0034270 | Msa0407920 | 0.808142 | 3.581416e-50 | -8.615850e-47 |
| Msa0051790 | Msa0407920 | 0.804919 | 1.714078e-49 | -8.615850e-47 |
| Msa0053780 | Msa0407920 | 0.801761 | 7.730054e-49 | -8.615850e-47 |
| Msa0068680 | Msa0407920 | 0.820855 | 5.500563e-53 | -8.615850e-47 |
| Msa0072370 | Msa0407920 | 0.815078 | 1.111198e-51 | -8.615850e-47 |
| Msa0078650 | Msa0407920 | 0.807342 | 5.297615e-50 | -8.615850e-47 |
| Msa0089630 | Msa0407920 | 0.817208 | 3.715386e-52 | -8.615850e-47 |
| Msa0094140 | Msa0407920 | 0.810615 | 1.055421e-50 | -8.615850e-47 |
| Msa0101810 | Msa0407920 | -0.841184 | 5.543722e-58 | -8.615850e-47 |
| Msa0110970 | Msa0407920 | 0.848009 | 8.053767e-60 | -8.615850e-47 |
| Msa0112750 | Msa0407920 | 0.835101 | 2.041418e-56 | -8.615850e-47 |
| Msa0118570 | Msa0407920 | 0.807539 | 4.810905e-50 | -8.615850e-47 |
| Msa0124340 | Msa0407920 | 0.808143 | 3.579650e-50 | -8.615850e-47 |
| Msa0125090 | Msa0407920 | 0.822130 | 2.792204e-53 | -8.615850e-47 |
| Msa0126370 | Msa0407920 | 0.805143 | 1.539156e-49 | -8.615850e-47 |
| Msa0130570 | Msa0407920 | 0.808742 | 2.666878e-50 | -8.615850e-47 |
| Msa0140780 | Msa0407920 | 0.830221 | 3.318290e-55 | -8.615850e-47 |
| Msa0142200 | Msa0407920 | 0.866847 | 2.112799e-65 | -8.615850e-47 |
| Msa0152430 | Msa0407920 | 0.818367 | 2.033642e-52 | -8.615850e-47 |
| Msa0157290 | Msa0407920 | 0.875315 | 3.395615e-68 | -8.615850e-47 |
| Msa0163980 | Msa0407920 | 0.800976 | 1.119402e-48 | -8.615850e-47 |
| Msa0169860 | Msa0407920 | 0.824982 | 6.008692e-54 | -8.615850e-47 |
| Msa0169920 | Msa0407920 | 0.824723 | 6.916272e-54 | -8.615850e-47 |
| Msa0173990 | Msa0407920 | 0.816908 | 4.337697e-52 | -8.615850e-47 |
| Msa0191040 | Msa0407920 | 0.801104 | 1.053796e-48 | -8.615850e-47 |
| Msa0191250 | Msa0407920 | 0.833794 | 4.345838e-56 | -8.615850e-47 |
| Msa0197930 | Msa0407920 | 0.840264 | 9.654094e-58 | -8.615850e-47 |
| Msa0200260 | Msa0407920 | 0.831613 | 1.511820e-55 | -8.615850e-47 |
| Msa0202950 | Msa0407920 | 0.812512 | 4.085211e-51 | -8.615850e-47 |
| Msa0205510 | Msa0407920 | 0.804728 | 1.879093e-49 | -8.615850e-47 |
| Msa0205850 | Msa0407920 | 0.819199 | 1.316641e-52 | -8.615850e-47 |
| Msa0215320 | Msa0407920 | -0.814809 | 1.275462e-51 | -8.615850e-47 |
| Msa0225600 | Msa0407920 | 0.804366 | 2.235571e-49 | -8.615850e-47 |
| Msa0225760 | Msa0407920 | 0.804212 | 2.407213e-49 | -8.615850e-47 |
| Msa0227470 | Msa0407920 | 0.869559 | 2.827339e-66 | -8.615850e-47 |
| Msa0233340 | Msa0407920 | 0.801135 | 1.038757e-48 | -8.615850e-47 |
| Msa0366240 | Msa0407920 | 0.814772 | 1.299497e-51 | -8.615850e-47 |
| Msa0369850 | Msa0407920 | 0.800562 | 1.359835e-48 | -8.615850e-47 |
| Msa0385390 | Msa0407920 | 0.806116 | 9.615935e-50 | -8.615850e-47 |
| Msa0387510 | Msa0407920 | 0.824375 | 8.353134e-54 | -8.615850e-47 |
| Msa0388960 | Msa0407920 | 0.810195 | 1.300768e-50 | -8.615850e-47 |
| Msa0389340 | Msa0407920 | 0.802257 | 6.114148e-49 | -8.615850e-47 |
| Msa0392420 | Msa0407920 | 0.823064 | 1.693792e-53 | -8.615850e-47 |
| Msa0392460 | Msa0407920 | 0.818897 | 1.542177e-52 | -8.615850e-47 |
| Msa0392490 | Msa0407920 | 0.816871 | 4.422405e-52 | -8.615850e-47 |
| Msa0395790 | Msa0407920 | 0.830012 | 3.731261e-55 | -8.615850e-47 |
| Msa0407780 | Msa0407920 | 0.831177 | 1.935418e-55 | -8.615850e-47 |
| Msa0407880 | Msa0407920 | 0.938012 | 1.357331e-98 | -8.615850e-47 |
| Msa0407890 | Msa0407920 | 0.822708 | 2.049781e-53 | -8.615850e-47 |
| Msa0407900 | Msa0407920 | 0.953073 | 6.106432e-111 | -8.615850e-47 |
| Msa0407910 | Msa0407920 | 0.901557 | 2.376438e-78 | -8.615850e-47 |
| Msa0407920 | Msa0410650 | 0.835759 | 1.391821e-56 | -8.615850e-47 |
| Msa0407920 | Msa0417880 | 0.807348 | 5.282601e-50 | -8.615850e-47 |
| Msa0407920 | Msa0419820 | 0.825272 | 5.131134e-54 | -8.615850e-47 |
| Msa0407920 | Msa0427880 | 0.801566 | 8.474811e-49 | -8.615850e-47 |
| Msa0407920 | Msa0443260 | 0.809057 | 2.283565e-50 | -8.615850e-47 |
| Msa0407920 | Msa0450440 | 0.814925 | 1.202038e-51 | -8.615850e-47 |
| Msa0407920 | Msa0452920 | 0.870059 | 1.941483e-66 | -8.615850e-47 |
| Msa0407920 | Msa0461720 | 0.822535 | 2.248411e-53 | -8.615850e-47 |
| Msa0407920 | Msa0461730 | 0.806961 | 6.379101e-50 | -8.615850e-47 |
| Msa0407920 | Msa0465910 | 0.808526 | 2.966649e-50 | -8.615850e-47 |
| Msa0407920 | Msa0466390 | 0.805322 | 1.411922e-49 | -8.615850e-47 |
| Msa0407920 | Msa0484780 | 0.834656 | 2.641819e-56 | -8.615850e-47 |
| Msa0407920 | Msa0487570 | 0.821860 | 3.225305e-53 | -8.615850e-47 |
| Msa0407920 | Msa0487630 | 0.824995 | 5.965810e-54 | -8.615850e-47 |
| Msa0407920 | Msa0495320 | 0.809366 | 1.960515e-50 | -8.615850e-47 |
| Msa0407920 | Msa0503580 | 0.822653 | 2.111085e-53 | -8.615850e-47 |
| Msa0407920 | Msa0507680 | 0.832919 | 7.181107e-56 | -8.615850e-47 |
| Msa0407920 | Msa0509610 | 0.829117 | 6.158280e-55 | -8.615850e-47 |
| Msa0407920 | Msa0510980 | 0.823085 | 1.674733e-53 | -8.615850e-47 |
| Msa0407920 | Msa0512900 | 0.824549 | 7.600316e-54 | -8.615850e-47 |
| Msa0407920 | Msa0513160 | 0.804048 | 2.604143e-49 | -8.615850e-47 |
| Msa0407920 | Msa0523460 | 0.829692 | 4.464270e-55 | -8.615850e-47 |
| Msa0407920 | Msa0527550 | 0.815160 | 1.065971e-51 | -8.615850e-47 |
| Msa0407920 | Msa0527790 | 0.808494 | 3.012737e-50 | -8.615850e-47 |
| Msa0407920 | Msa0534590 | 0.811562 | 6.579806e-51 | -8.615850e-47 |
| Msa0407920 | Msa0535040 | 0.814872 | 1.234777e-51 | -8.615850e-47 |
| Msa0407920 | Msa0546680 | 0.802743 | 4.854465e-49 | -8.615850e-47 |
| Msa0407920 | Msa0574890 | 0.829276 | 5.634395e-55 | -8.615850e-47 |
| Msa0407920 | Msa0581760 | 0.806308 | 8.763248e-50 | -8.615850e-47 |
| Msa0407920 | Msa0627450 | 0.801565 | 8.479972e-49 | -8.615850e-47 |
| Msa0407920 | Msa0641360 | 0.820019 | 8.557492e-53 | -8.615850e-47 |
| Msa0407920 | Msa0647130 | 0.820914 | 5.331754e-53 | -8.615850e-47 |
| Msa0407920 | Msa0657970 | 0.840539 | 8.180173e-58 | -8.615850e-47 |
| Msa0407920 | Msa0662240 | 0.805094 | 1.575982e-49 | -8.615850e-47 |
| Msa0407920 | Msa0682330 | 0.814470 | 1.515545e-51 | -8.615850e-47 |
| Msa0407920 | Msa0682550 | 0.804159 | 2.469422e-49 | -8.615850e-47 |
| Msa0407920 | Msa0683510 | 0.811928 | 5.477028e-51 | -8.615850e-47 |
| Msa0407920 | Msa0684500 | 0.804810 | 1.806529e-49 | -8.615850e-47 |
| Msa0407920 | Msa0693380 | 0.803460 | 3.449353e-49 | -8.615850e-47 |
| Msa0407920 | Msa0696640 | 0.808562 | 2.914268e-50 | -8.615850e-47 |
| Msa0407920 | Msa0702350 | 0.806379 | 8.466437e-50 | -8.615850e-47 |
| Msa0407920 | Msa0702680 | 0.800683 | 1.284845e-48 | -8.615850e-47 |
| Msa0407920 | Msa0708520 | 0.801873 | 7.330134e-49 | -8.615850e-47 |
| Msa0407920 | Msa0716450 | 0.819920 | 9.016143e-53 | -8.615850e-47 |
| Msa0407920 | Msa0741900 | 0.803511 | 3.366516e-49 | -8.615850e-47 |
| Msa0407920 | Msa0754520 | 0.800263 | 1.564436e-48 | -8.615850e-47 |
| Msa0407920 | Msa0756630 | -0.803056 | 4.181915e-49 | -8.615850e-47 |
| Msa0407920 | Msa0787260 | 0.807945 | 3.944040e-50 | -8.615850e-47 |
| Msa0407920 | Msa0799030 | 0.802125 | 6.508319e-49 | -8.615850e-47 |
| Msa0407920 | Msa0801760 | 0.814988 | 1.163493e-51 | -8.615850e-47 |
| Msa0407920 | Msa0803890 | 0.808438 | 3.097257e-50 | -8.615850e-47 |
| Msa0407920 | Msa0816710 | 0.803752 | 3.000113e-49 | -8.615850e-47 |
| Msa0407920 | Msa0822870 | 0.805578 | 1.247772e-49 | -8.615850e-47 |
| Msa0407920 | Msa0824660 | 0.815279 | 1.002884e-51 | -8.615850e-47 |
| Msa0407920 | Msa0824680 | 0.800189 | 1.620002e-48 | -8.615850e-47 |
| Msa0407920 | Msa0828560 | 0.812835 | 3.471515e-51 | -8.615850e-47 |
| Msa0407920 | Msa0829620 | 0.823960 | 1.045146e-53 | -8.615850e-47 |
| Msa0407920 | Msa0833220 | 0.807259 | 5.515084e-50 | -8.615850e-47 |
| Msa0407920 | Msa0843400 | 0.810717 | 1.003139e-50 | -8.615850e-47 |
| Msa0407920 | Msa0844560 | 0.811073 | 8.402617e-51 | -8.615850e-47 |
| Msa0407920 | Msa0853660 | 0.806671 | 7.345235e-50 | -8.615850e-47 |
| Msa0407920 | Msa0858840 | 0.830517 | 2.809067e-55 | -8.615850e-47 |
| Msa0407920 | Msa0867890 | 0.838128 | 3.456129e-57 | -8.615850e-47 |
| Msa0407920 | Msa0870530 | 0.818029 | 2.426092e-52 | -8.615850e-47 |
| Msa0407920 | Msa0880140 | 0.873247 | 1.705218e-67 | -8.615850e-47 |
| Msa0407920 | Msa0883060 | 0.823588 | 1.277754e-53 | -8.615850e-47 |
| Msa0407920 | Msa0896540 | 0.802941 | 4.417549e-49 | -8.615850e-47 |
| Msa0407920 | Msa0896750 | 0.807308 | 5.385133e-50 | -8.615850e-47 |
| Msa0407920 | Msa0903700 | 0.802415 | 5.670435e-49 | -8.615850e-47 |
| Msa0407920 | Msa0906200 | 0.828392 | 9.223208e-55 | -8.615850e-47 |
| Msa0407920 | Msa0908050 | 0.830184 | 3.387458e-55 | -8.615850e-47 |
| Msa0407920 | Msa0909120 | 0.818539 | 1.859037e-52 | -8.615850e-47 |
| Msa0407920 | Msa0909140 | 0.811700 | 6.139250e-51 | -8.615850e-47 |
| Msa0407920 | Msa0910430 | 0.810122 | 1.348680e-50 | -8.615850e-47 |
| Msa0407920 | Msa0933230 | 0.803698 | 3.078535e-49 | -8.615850e-47 |
| Msa0407920 | Msa0936410 | 0.817959 | 2.515813e-52 | -8.615850e-47 |
| Msa0407920 | Msa0948290 | 0.800792 | 1.220628e-48 | -8.615850e-47 |
| Msa0407920 | Msa0954130 | 0.807026 | 6.181227e-50 | -8.615850e-47 |
| Msa0407920 | Msa0954550 | 0.816664 | 4.922611e-52 | -8.615850e-47 |
| Msa0407920 | Msa0969520 | 0.811936 | 5.454815e-51 | -8.615850e-47 |
| Msa0407920 | Msa0973150 | 0.802686 | 4.986087e-49 | -8.615850e-47 |
| Msa0407920 | Msa0973160 | 0.800508 | 1.394821e-48 | -8.615850e-47 |
| Msa0407920 | Msa0973250 | 0.819394 | 1.188741e-52 | -8.615850e-47 |
| Msa0407920 | Msa0990350 | 0.808569 | 2.904446e-50 | -8.615850e-47 |
| Msa0407920 | Msa1002620 | 0.803899 | 2.796606e-49 | -8.615850e-47 |
| Msa0407920 | Msa1003750 | 0.815054 | 1.124919e-51 | -8.615850e-47 |
| Msa0407920 | Msa1007270 | 0.808259 | 3.381548e-50 | -8.615850e-47 |
| Msa0407920 | Msa1030970 | 0.804198 | 2.423918e-49 | -8.615850e-47 |
| Msa0407920 | Msa1031930 | 0.813215 | 2.865362e-51 | -8.615850e-47 |
| Msa0407920 | Msa1044420 | 0.810680 | 1.021695e-50 | -8.615850e-47 |
| Msa0407920 | Msa1069100 | 0.803640 | 3.165420e-49 | -8.615850e-47 |
| Msa0407920 | Msa1075540 | 0.803577 | 3.261617e-49 | -8.615850e-47 |
| Msa0407920 | Msa1079590 | 0.808536 | 2.950897e-50 | -8.615850e-47 |
| Msa0407920 | Msa1082500 | 0.839301 | 1.719854e-57 | -8.615850e-47 |
| Msa0407920 | Msa1085200 | 0.834538 | 2.828889e-56 | -8.615850e-47 |
| Msa0407920 | Msa1085300 | 0.804856 | 1.766867e-49 | -8.615850e-47 |
| Msa0407920 | Msa1098560 | 0.809767 | 1.607781e-50 | -8.615850e-47 |
| Msa0407920 | Msa1102770 | 0.800719 | 1.263165e-48 | -8.615850e-47 |
| Msa0407920 | Msa1104000 | 0.814344 | 1.615849e-51 | -8.615850e-47 |
| Msa0407920 | Msa1131220 | 0.817053 | 4.024538e-52 | -8.615850e-47 |
| Msa0407920 | Msa1139810 | 0.804558 | 2.039646e-49 | -8.615850e-47 |
| Msa0407920 | Msa1140690 | 0.809197 | 2.131721e-50 | -8.615850e-47 |
| Msa0407920 | Msa1151910 | 0.827174 | 1.809782e-54 | -8.615850e-47 |
| Msa0407920 | Msa1161580 | 0.801864 | 7.364156e-49 | -8.615850e-47 |
| Msa0407920 | Msa1162550 | -0.801300 | 9.608206e-49 | -8.615850e-47 |
| Msa0407920 | Msa1172450 | 0.810114 | 1.353849e-50 | -8.615850e-47 |
| Msa0407920 | Msa1172670 | 0.818659 | 1.746823e-52 | -8.615850e-47 |
| Msa0407920 | Msa1179460 | 0.841453 | 4.710075e-58 | -8.615850e-47 |
| Msa0407920 | Msa1179940 | 0.801426 | 9.054079e-49 | -8.615850e-47 |
| Msa0407920 | Msa1179970 | 0.802920 | 4.462221e-49 | -8.615850e-47 |
| Msa0407920 | Msa1186060 | 0.800087 | 1.698635e-48 | -8.615850e-47 |
| Msa0407920 | Msa1187840 | 0.803397 | 3.554801e-49 | -8.615850e-47 |
| Msa0407920 | Msa1200440 | 0.810165 | 1.319763e-50 | -8.615850e-47 |
| Msa0407920 | Msa1214890 | 0.812195 | 4.791051e-51 | -8.615850e-47 |
| Msa0407920 | Msa1222970 | 0.805329 | 1.406934e-49 | -8.615850e-47 |
| Msa0407920 | Msa1227950 | 0.808626 | 2.823218e-50 | -8.615850e-47 |
| Msa0407920 | Msa1228190 | 0.804587 | 2.010951e-49 | -8.615850e-47 |
| Msa0407920 | Msa1238930 | 0.813935 | 1.990050e-51 | -8.615850e-47 |
| Msa0407920 | Msa1242220 | 0.807385 | 5.186377e-50 | -8.615850e-47 |
| Msa0407920 | Msa1242230 | 0.809070 | 2.269412e-50 | -8.615850e-47 |
| Msa0407920 | Msa1242240 | 0.806542 | 7.821691e-50 | -8.615850e-47 |
| Msa0407920 | Msa1267960 | 0.811841 | 5.721825e-51 | -8.615850e-47 |
| Msa0407920 | Msa1270610 | 0.800971 | 1.121746e-48 | -8.615850e-47 |
| Msa0407920 | Msa1271290 | 0.811526 | 6.700025e-51 | -8.615850e-47 |
| Msa0407920 | Msa1271300 | 0.802829 | 4.658150e-49 | -8.615850e-47 |
| Msa0407920 | Msa1278840 | 0.807455 | 5.013096e-50 | -8.615850e-47 |
| Msa0407920 | Msa1283860 | 0.828871 | 7.064336e-55 | -8.615850e-47 |
| Msa0407920 | Msa1284260 | 0.804876 | 1.749909e-49 | -8.615850e-47 |
| Msa0407920 | Msa1289280 | 0.828684 | 7.840746e-55 | -8.615850e-47 |
| Msa0407920 | Msa1293770 | 0.830250 | 3.264050e-55 | -8.615850e-47 |
| Msa0407920 | Msa1300490 | 0.820788 | 5.699784e-53 | -8.615850e-47 |
| Msa0407920 | Msa1303250 | 0.807138 | 5.850690e-50 | -8.615850e-47 |
| Msa0407920 | Msa1305340 | 0.803026 | 4.241421e-49 | -8.615850e-47 |
| Msa0407920 | Msa1308380 | 0.810122 | 1.348269e-50 | -8.615850e-47 |
| Msa0407920 | Msa1313150 | 0.809051 | 2.289958e-50 | -8.615850e-47 |
| Msa0407920 | Msa1318240 | 0.800539 | 1.374760e-48 | -8.615850e-47 |
| Msa0407920 | Msa1320740 | 0.806013 | 1.010876e-49 | -8.615850e-47 |
| Msa0407920 | Msa1322860 | 0.816825 | 4.529132e-52 | -8.615850e-47 |
| Msa0407920 | Msa1322890 | 0.809344 | 1.981944e-50 | -8.615850e-47 |
| Msa0407920 | Msa1324500 | 0.831883 | 1.296565e-55 | -8.615850e-47 |
| Msa0407920 | Msa1324550 | 0.801574 | 8.442331e-49 | -8.615850e-47 |
| Msa0407920 | Msa1327050 | 0.825937 | 3.569780e-54 | -8.615850e-47 |
| Msa0407920 | Msa1331910 | 0.821891 | 3.171597e-53 | -8.615850e-47 |
| Msa0407920 | Msa1346370 | 0.822493 | 2.299981e-53 | -8.615850e-47 |
| Msa0407920 | Msa1359040 | 0.810186 | 1.306056e-50 | -8.615850e-47 |
| Msa0407920 | Msa1374550 | 0.832348 | 9.951116e-56 | -8.615850e-47 |
| Msa0407920 | Msa1397250 | 0.804537 | 2.059995e-49 | -8.615850e-47 |
| Msa0407920 | Msa1409870 | 0.809736 | 1.633189e-50 | -8.615850e-47 |
| Msa0407920 | Msa1423880 | 0.822511 | 2.278056e-53 | -8.615850e-47 |
| Msa0407920 | Msa1425100 | 0.803424 | 3.508899e-49 | -8.615850e-47 |
| Msa0407920 | Msa1427760 | 0.807558 | 4.767709e-50 | -8.615850e-47 |
| Msa0407920 | Msa1430240 | 0.823211 | 1.564942e-53 | -8.615850e-47 |
| Msa0407920 | Msa1438250 | 0.847546 | 1.080184e-59 | -8.615850e-47 |
| Msa0407920 | Msa1445190 | 0.806089 | 9.742602e-50 | -8.615850e-47 |
| Msa0407920 | Msa1452120 | 0.807145 | 5.832225e-50 | -8.615850e-47 |
| Msa0407920 | Msa1457430 | 0.800098 | 1.690299e-48 | -8.615850e-47 |
| Msa0407920 | Msa1460020 | 0.803559 | 3.290744e-49 | -8.615850e-47 |
| Msa0407920 | Msa1461300 | 0.813721 | 2.217736e-51 | -8.615850e-47 |
| Msa0239570 | Msa0407920 | 0.818533 | 1.865063e-52 | -8.615850e-47 |
| Msa0240110 | Msa0407920 | 0.818201 | 2.218227e-52 | -8.615850e-47 |
| Msa0240150 | Msa0407920 | 0.810725 | 9.992529e-51 | -8.615850e-47 |
| Msa0243100 | Msa0407920 | 0.844107 | 9.280334e-59 | -8.615850e-47 |
| Msa0243890 | Msa0407920 | 0.800485 | 1.410044e-48 | -8.615850e-47 |
| Msa0244860 | Msa0407920 | 0.809384 | 1.942943e-50 | -8.615850e-47 |
| Msa0248970 | Msa0407920 | 0.833333 | 5.664501e-56 | -8.615850e-47 |
| Msa0257250 | Msa0407920 | 0.800836 | 1.195679e-48 | -8.615850e-47 |
| Msa0261340 | Msa0407920 | 0.826400 | 2.769909e-54 | -8.615850e-47 |
| Msa0266450 | Msa0407920 | 0.801276 | 9.720154e-49 | -8.615850e-47 |
| Msa0283450 | Msa0407920 | 0.809029 | 2.315304e-50 | -8.615850e-47 |
| Msa0283520 | Msa0407920 | 0.805529 | 1.277321e-49 | -8.615850e-47 |
| Msa0284420 | Msa0407920 | 0.821100 | 4.832241e-53 | -8.615850e-47 |
| Msa0287650 | Msa0407920 | 0.838423 | 2.902158e-57 | -8.615850e-47 |
| Msa0295070 | Msa0407920 | 0.805480 | 1.308391e-49 | -8.615850e-47 |
| Msa0296560 | Msa0407920 | 0.803756 | 2.995357e-49 | -8.615850e-47 |
| Msa0302000 | Msa0407920 | 0.801263 | 9.778232e-49 | -8.615850e-47 |
| Msa0305700 | Msa0407920 | 0.808610 | 2.845563e-50 | -8.615850e-47 |
| Msa0306300 | Msa0407920 | 0.815219 | 1.033965e-51 | -8.615850e-47 |
| Msa0308830 | Msa0407920 | 0.820521 | 6.566022e-53 | -8.615850e-47 |
| Msa0311860 | Msa0407920 | 0.811060 | 8.454637e-51 | -8.615850e-47 |
| Msa0316810 | Msa0407920 | 0.800024 | 1.749296e-48 | -8.615850e-47 |
| Msa0317280 | Msa0407920 | 0.834782 | 2.455677e-56 | -8.615850e-47 |
| Msa0317340 | Msa0407920 | 0.815555 | 8.708518e-52 | -8.615850e-47 |
| Msa0322690 | Msa0407920 | 0.807305 | 5.394331e-50 | -8.615850e-47 |
| Msa0323610 | Msa0407920 | 0.805021 | 1.632534e-49 | -8.615850e-47 |
| Msa0332000 | Msa0407920 | 0.812624 | 3.860231e-51 | -8.615850e-47 |
| Msa0334040 | Msa0407920 | 0.800548 | 1.368605e-48 | -8.615850e-47 |
| Msa0340090 | Msa0407920 | 0.811682 | 6.196821e-51 | -8.615850e-47 |
| Msa0344570 | Msa0407920 | 0.801894 | 7.258909e-49 | -8.615850e-47 |
| Msa0362680 | Msa0407920 | 0.820586 | 6.342597e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0407920 | MtrunA17_Chr3g0098481 | 89.275 | 345 | 27 | 1 | 108 | 442 | 1 | 345 | 0.0 | 639 |
| Msa0407920 | MtrunA17_Chr3g0098301 | 63.170 | 429 | 123 | 6 | 19 | 435 | 1 | 406 | 0.0 | 516 |
| Msa0407920 | MtrunA17_Chr3g0098531 | 67.114 | 298 | 87 | 2 | 155 | 442 | 1 | 297 | 3.88e-149 | 426 |
| Msa0407920 | MtrunA17_Chr3g0102001 | 52.866 | 314 | 127 | 5 | 141 | 439 | 439 | 746 | 2.80e-96 | 305 |
| Msa0407920 | MtrunA17_Chr5g0439061 | 52.866 | 314 | 132 | 4 | 141 | 442 | 435 | 744 | 4.06e-95 | 302 |
| Msa0407920 | MtrunA17_Chr2g0286601 | 42.484 | 306 | 158 | 5 | 144 | 438 | 391 | 689 | 8.27e-74 | 244 |
| Msa0407920 | MtrunA17_Chr5g0439051 | 56.585 | 205 | 77 | 2 | 248 | 442 | 20 | 222 | 2.24e-67 | 214 |
| Msa0407920 | MtrunA17_Chr2g0286551 | 41.176 | 323 | 164 | 5 | 135 | 438 | 353 | 668 | 8.87e-67 | 225 |
| Msa0407920 | MtrunA17_Chr3g0098511 | 84.314 | 102 | 16 | 0 | 341 | 442 | 1 | 102 | 5.47e-59 | 188 |
| Msa0407920 | MtrunA17_Chr5g0439081 | 50.510 | 196 | 84 | 3 | 248 | 433 | 16 | 208 | 2.32e-58 | 191 |
| Msa0407920 | MtrunA17_Chr2g0286561 | 42.254 | 213 | 108 | 4 | 238 | 438 | 5 | 214 | 4.41e-50 | 169 |
| Msa0407920 | MtrunA17_Chr5g0443001 | 35.570 | 298 | 167 | 9 | 146 | 429 | 316 | 602 | 4.56e-43 | 160 |
| Msa0407920 | MtrunA17_Chr2g0297701 | 32.646 | 291 | 179 | 5 | 146 | 425 | 282 | 566 | 2.61e-40 | 152 |
| Msa0407920 | MtrunA17_Chr2g0297491 | 32.353 | 306 | 181 | 7 | 146 | 435 | 91 | 386 | 7.90e-39 | 144 |
| Msa0407920 | MtrunA17_Chr5g0410171 | 30.029 | 343 | 216 | 6 | 102 | 428 | 397 | 731 | 8.80e-39 | 149 |
| Msa0407920 | MtrunA17_Chr2g0297681 | 31.126 | 302 | 191 | 7 | 146 | 435 | 402 | 698 | 8.30e-37 | 143 |
| Msa0407920 | MtrunA17_Chr5g0410271 | 30.201 | 298 | 192 | 4 | 142 | 428 | 32 | 324 | 1.09e-35 | 134 |
| Msa0407920 | MtrunA17_Chr6g0456141 | 31.496 | 254 | 158 | 4 | 142 | 384 | 92 | 340 | 3.89e-35 | 134 |
| Msa0407920 | MtrunA17_Chr5g0410201 | 30.201 | 298 | 192 | 4 | 142 | 428 | 33 | 325 | 4.10e-35 | 132 |
| Msa0407920 | MtrunA17_Chr6g0456101 | 33.977 | 259 | 155 | 4 | 142 | 389 | 449 | 702 | 6.14e-35 | 137 |
| Msa0407920 | MtrunA17_Chr2g0297691 | 30.921 | 304 | 189 | 8 | 146 | 435 | 404 | 700 | 7.55e-35 | 137 |
| Msa0407920 | MtrunA17_Chr6g0457101 | 31.034 | 261 | 164 | 4 | 140 | 389 | 394 | 649 | 1.12e-34 | 137 |
| Msa0407920 | MtrunA17_Chr5g0410341 | 29.836 | 305 | 184 | 5 | 142 | 428 | 451 | 743 | 1.20e-34 | 137 |
| Msa0407920 | MtrunA17_Chr2g0297481 | 32.000 | 300 | 172 | 10 | 146 | 429 | 189 | 472 | 1.55e-34 | 134 |
| Msa0407920 | MtrunA17_Chr2g0284501 | 32.593 | 270 | 160 | 7 | 166 | 424 | 392 | 650 | 7.32e-34 | 134 |
| Msa0407920 | MtrunA17_Chr2g0297711 | 30.822 | 292 | 182 | 7 | 149 | 429 | 245 | 527 | 4.11e-33 | 131 |
| Msa0407920 | MtrunA17_Chr2g0284541 | 31.132 | 318 | 189 | 7 | 141 | 441 | 351 | 655 | 1.68e-32 | 130 |
| Msa0407920 | MtrunA17_Chr5g0410371 | 31.210 | 314 | 190 | 8 | 144 | 442 | 2 | 304 | 1.77e-32 | 125 |
| Msa0407920 | MtrunA17_Chr3g0100301 | 38.000 | 200 | 107 | 5 | 233 | 419 | 205 | 400 | 1.78e-32 | 127 |
| Msa0407920 | MtrunA17_Chr2g0297651 | 31.699 | 306 | 177 | 11 | 146 | 432 | 404 | 696 | 2.12e-32 | 130 |
| Msa0407920 | MtrunA17_Chr3g0100741 | 30.945 | 307 | 187 | 9 | 127 | 419 | 292 | 587 | 6.23e-31 | 125 |
| Msa0407920 | MtrunA17_Chr5g0410461 | 28.931 | 318 | 204 | 7 | 135 | 437 | 160 | 470 | 4.58e-30 | 121 |
| Msa0407920 | MtrunA17_Chr5g0410581 | 28.159 | 277 | 183 | 5 | 135 | 399 | 491 | 763 | 2.73e-29 | 121 |
| Msa0407920 | MtrunA17_Chr3g0096941 | 30.293 | 307 | 189 | 9 | 127 | 419 | 293 | 588 | 7.05e-26 | 110 |
| Msa0407920 | MtrunA17_Chr5g0410191 | 31.319 | 182 | 111 | 3 | 258 | 428 | 12 | 190 | 4.46e-24 | 99.0 |
| Msa0407920 | MtrunA17_Chr5g0439041 | 45.536 | 112 | 55 | 2 | 141 | 248 | 59 | 168 | 2.66e-22 | 94.7 |
| Msa0407920 | MtrunA17_Chr5g0410541 | 34.722 | 144 | 84 | 1 | 263 | 396 | 38 | 181 | 1.04e-19 | 87.4 |
| Msa0407920 | MtrunA17_Chr5g0410451 | 30.120 | 166 | 105 | 2 | 242 | 396 | 35 | 200 | 1.66e-16 | 79.0 |
| Msa0407920 | MtrunA17_Chr5g0410181 | 31.298 | 131 | 86 | 2 | 299 | 428 | 4 | 131 | 2.11e-15 | 72.8 |
| Msa0407920 | MtrunA17_Chr5g0410511 | 29.444 | 180 | 116 | 2 | 250 | 418 | 4 | 183 | 7.33e-15 | 73.2 |
| Msa0407920 | MtrunA17_Chr2g0297611 | 35.556 | 90 | 47 | 3 | 253 | 332 | 1 | 89 | 3.38e-12 | 62.4 |
| Msa0407920 | MtrunA17_Chr1g0211541 | 25.221 | 226 | 146 | 5 | 135 | 346 | 211 | 427 | 1.30e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0407920 | AT3G18670.1 | 28.846 | 364 | 231 | 9 | 88 | 429 | 227 | 584 | 2.31e-44 | 164 |
| Msa0407920 | AT3G18670.2 | 30.120 | 332 | 210 | 7 | 114 | 429 | 314 | 639 | 5.42e-44 | 163 |
| Msa0407920 | AT5G35810.1 | 30.392 | 306 | 192 | 6 | 137 | 426 | 29 | 329 | 1.26e-37 | 140 |
| Msa0407920 | AT5G04690.1 | 33.617 | 235 | 138 | 5 | 209 | 431 | 386 | 614 | 5.60e-37 | 143 |
| Msa0407920 | AT5G04690.3 | 33.617 | 235 | 138 | 5 | 209 | 431 | 406 | 634 | 7.22e-37 | 143 |
| Msa0407920 | AT5G04690.2 | 33.617 | 235 | 138 | 5 | 209 | 431 | 420 | 648 | 9.02e-37 | 143 |
| Msa0407920 | AT5G04700.1 | 32.063 | 315 | 187 | 9 | 134 | 431 | 354 | 658 | 2.04e-36 | 142 |
| Msa0407920 | AT3G54065.1 | 34.286 | 210 | 119 | 5 | 234 | 426 | 8 | 215 | 2.46e-32 | 123 |
| Msa0407920 | AT5G04680.3 | 29.907 | 321 | 194 | 8 | 134 | 431 | 327 | 639 | 3.99e-31 | 126 |
| Msa0407920 | AT5G04680.4 | 29.063 | 320 | 198 | 6 | 134 | 431 | 341 | 653 | 5.50e-31 | 126 |
| Msa0407920 | AT5G04680.2 | 29.375 | 320 | 197 | 7 | 134 | 431 | 218 | 530 | 5.90e-31 | 125 |
| Msa0407920 | AT5G04680.1 | 29.375 | 320 | 197 | 7 | 134 | 431 | 370 | 682 | 6.65e-31 | 126 |
| Msa0407920 | AT5G04730.1 | 29.221 | 308 | 187 | 9 | 142 | 431 | 297 | 591 | 2.40e-30 | 124 |
Find 89 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCTATTTGTATCATTATA+AGG | 0.224560 | 3_2:+47210841 | Msa0407920:three_prime_UTR |
| TGCTTGCCTCTCACATTCTA+TGG | 0.260173 | 3_2:+47210576 | Msa0407920:CDS |
| AACCCCAGGTGAAATCTTTA+AGG | 0.271604 | 3_2:+47210158 | Msa0407920:CDS |
| ATGTTCATTTCTTTCATTGC+TGG | 0.288747 | 3_2:+47210486 | Msa0407920:CDS |
| AAGTGGCGTAGTTGAAATTA+TGG | 0.312736 | 3_2:+47209296 | Msa0407920:CDS |
| CTTCTTTGTTGCTTCTATGA+TGG | 0.336687 | 3_2:-47210131 | None:intergenic |
| CCTGTTTCCTGATTGCCTCC+AGG | 0.337339 | 3_2:-47210267 | None:intergenic |
| GATCAAGATATAACGGAAAC+TGG | 0.338760 | 3_2:-47210605 | None:intergenic |
| TTCAAGTGCACGCATGATTT+CGG | 0.351916 | 3_2:-47209448 | None:intergenic |
| CATTGTCAGAGTTAGTTTCA+TGG | 0.358694 | 3_2:-47209491 | None:intergenic |
| TTTGCTGTATCTTCATTAGT+TGG | 0.362700 | 3_2:+47210327 | Msa0407920:CDS |
| CCTGGAGGCAATCAGGAAAC+AGG | 0.362749 | 3_2:+47210267 | Msa0407920:CDS |
| TCCTTTCTATACTCACTTCT+CGG | 0.368888 | 3_2:+47210382 | Msa0407920:CDS |
| AAAACTGCTTGGAGGATATC+TGG | 0.377606 | 3_2:+47209675 | Msa0407920:CDS |
| CGCAAGTTGTTGAGGGGTTG+TGG | 0.380881 | 3_2:+47209550 | Msa0407920:CDS |
| AAGAAAGAAATCAAAACAAA+TGG | 0.391933 | 3_2:+47209176 | Msa0407920:CDS |
| TGTTGCTTCTATGATGGTAA+TGG | 0.392154 | 3_2:-47210125 | None:intergenic |
| AGCTTAACACCCTTGATACT+TGG | 0.393569 | 3_2:-47210660 | None:intergenic |
| TTTATTACTTGTAGCAATGA+AGG | 0.395604 | 3_2:+47209359 | Msa0407920:CDS |
| GTTTATTATGTTTAGAGTAC+TGG | 0.399543 | 3_2:+47210798 | Msa0407920:three_prime_UTR |
| CTGTTTCCTGATTGCCTCCA+GGG | 0.400780 | 3_2:-47210266 | None:intergenic |
| TGGATTGAAACTCATGAGTT+TGG | 0.409080 | 3_2:+47210714 | Msa0407920:three_prime_UTR |
| TCCTCCTTAAAGATTTCACC+TGG | 0.410908 | 3_2:-47210162 | None:intergenic |
| GTTGTGGAAGAGGCTTTCTA+TGG | 0.418288 | 3_2:+47209566 | Msa0407920:CDS |
| CAACGTCCCTGGAGGCAATC+AGG | 0.419195 | 3_2:+47210260 | Msa0407920:CDS |
| TTGTTGAGGGGTTGTGGAAG+AGG | 0.439045 | 3_2:+47209556 | Msa0407920:CDS |
| CATATTCGGTAGCCAGCTCT+TGG | 0.441519 | 3_2:+47207822 | Msa0407920:CDS |
| CTTCTATGATGGTAATGGTC+TGG | 0.452731 | 3_2:-47210120 | None:intergenic |
| GGGGCTCATCCCTTGGATTA+CGG | 0.453441 | 3_2:+47207886 | Msa0407920:CDS |
| TCATAAATGCTTCCAAGAGC+TGG | 0.458200 | 3_2:-47207834 | None:intergenic |
| GTTAAGAAGAAGCACATATT+CGG | 0.460043 | 3_2:+47207808 | Msa0407920:CDS |
| ACAGGGAAACCAACATTTGA+AGG | 0.475667 | 3_2:+47210285 | Msa0407920:CDS |
| AACCTTAGGGGCAATGAAGA+TGG | 0.479996 | 3_2:+47207786 | None:intergenic |
| GAAGGGCAACCAGCATTTGA+AGG | 0.483339 | 3_2:+47210303 | Msa0407920:CDS |
| ATAGAACAAGATACCACTCT+TGG | 0.493665 | 3_2:-47210538 | None:intergenic |
| TCATGCTCAGTTGTAGCATC+AGG | 0.496629 | 3_2:+47210237 | Msa0407920:CDS |
| CTCCTTAAAGATTTCACCTG+GGG | 0.497170 | 3_2:-47210160 | None:intergenic |
| AGAGCTTAATTCAAAAGTAA+AGG | 0.498132 | 3_2:+47209320 | Msa0407920:CDS |
| GTGTGGTGGGGCTCATCCCT+TGG | 0.500121 | 3_2:+47207879 | Msa0407920:CDS |
| GAATGTGAGAGGCAAGCAAA+TGG | 0.502669 | 3_2:-47210571 | None:intergenic |
| AGAAAGAAATCAAAACAAAT+GGG | 0.508367 | 3_2:+47209177 | Msa0407920:CDS |
| GTAGCATCAGGCAACGTCCC+TGG | 0.511124 | 3_2:+47210249 | Msa0407920:CDS |
| GGTGCCACCACCAAGTATCA+AGG | 0.511463 | 3_2:+47210650 | Msa0407920:CDS |
| TTGAGAAGATCAAGATATAA+CGG | 0.512499 | 3_2:-47210612 | None:intergenic |
| CCACACATGTATGACTCATA+AGG | 0.512671 | 3_2:-47207862 | None:intergenic |
| TTGATCTTCTCAAAGTTACA+TGG | 0.512948 | 3_2:+47210622 | Msa0407920:CDS |
| AGAAATGAACATGGCAACAA+TGG | 0.515982 | 3_2:-47210475 | None:intergenic |
| ACAGCAAATCCTTCAAATGC+TGG | 0.519658 | 3_2:-47210312 | None:intergenic |
| TTAACACCCTTGATACTTGG+TGG | 0.523933 | 3_2:-47210657 | None:intergenic |
| GCTGGTTGCCCTTCAAATGT+TGG | 0.529783 | 3_2:-47210294 | None:intergenic |
| ATGAGTCATACATGTGTGGT+GGG | 0.531314 | 3_2:+47207866 | Msa0407920:CDS |
| CACAACCCCTCAACAACTTG+CGG | 0.534637 | 3_2:-47209549 | None:intergenic |
| TTGAAAGTGTCATGCACGAA+AGG | 0.536960 | 3_2:+47207947 | Msa0407920:CDS |
| TTGTTGATTTATGCTCTGAA+AGG | 0.537416 | 3_2:-47209592 | None:intergenic |
| AGACAACCGCAAGTTGTTGA+GGG | 0.537910 | 3_2:+47209543 | Msa0407920:CDS |
| GTAAAGGCATCTGACAAGAA+AGG | 0.540805 | 3_2:+47209336 | Msa0407920:CDS |
| CATCATAGAAGCAACAAAGA+AGG | 0.547820 | 3_2:+47210132 | Msa0407920:CDS |
| TCCGAGAAGTGAGTATAGAA+AGG | 0.552792 | 3_2:-47210383 | None:intergenic |
| GTCATGTTCTCCGTAATCCA+AGG | 0.556822 | 3_2:-47207896 | None:intergenic |
| TAGACAACCGCAAGTTGTTG+AGG | 0.558579 | 3_2:+47209542 | Msa0407920:CDS |
| GATGTCCCACATCATTTGCA+TGG | 0.565189 | 3_2:-47209703 | None:intergenic |
| CCTCCTTAAAGATTTCACCT+GGG | 0.568420 | 3_2:-47210161 | None:intergenic |
| TATGAGTCATACATGTGTGG+TGG | 0.583051 | 3_2:+47207865 | Msa0407920:CDS |
| AAATCAAAACAAATGGGAGA+AGG | 0.587759 | 3_2:+47209183 | Msa0407920:CDS |
| TATTTGCGTGCAGCAAAACA+TGG | 0.589012 | 3_2:+47209420 | Msa0407920:CDS |
| ACACCCTTGATACTTGGTGG+TGG | 0.591476 | 3_2:-47210654 | None:intergenic |
| GTGGGACATCAAGTGGTACA+AGG | 0.594742 | 3_2:+47209716 | Msa0407920:CDS |
| TCAAGGGTGTTAAGCTGTAG+AGG | 0.595960 | 3_2:+47210667 | Msa0407920:CDS |
| ACAGATAAATATTCCAAGAG+TGG | 0.603652 | 3_2:+47210525 | Msa0407920:CDS |
| CTGGAGGCAATCAGGAAACA+GGG | 0.606342 | 3_2:+47210268 | Msa0407920:CDS |
| GAATTACCAGCAAAGAAAAG+TGG | 0.610189 | 3_2:+47209381 | Msa0407920:CDS |
| CAGGGAAACCAACATTTGAA+GGG | 0.612015 | 3_2:+47210286 | Msa0407920:CDS |
| AGTGTCATGCACGAAAGGAA+AGG | 0.614504 | 3_2:+47207952 | Msa0407920:CDS |
| GTGCGGCCATGCAAATGATG+TGG | 0.618816 | 3_2:+47209697 | Msa0407920:CDS |
| TCTCAAAGTTACATGGAGGA+AGG | 0.625653 | 3_2:+47210629 | Msa0407920:CDS |
| GTGCCACCACCAAGTATCAA+GGG | 0.630567 | 3_2:+47210651 | Msa0407920:CDS |
| TCATGTTCTCCGTAATCCAA+GGG | 0.632076 | 3_2:-47207895 | None:intergenic |
| TTCTAGATAAAAGCATTGAG+TGG | 0.638047 | 3_2:+47210196 | Msa0407920:CDS |
| GACAACCGCAAGTTGTTGAG+GGG | 0.642150 | 3_2:+47209544 | Msa0407920:CDS |
| TGAGTCATACATGTGTGGTG+GGG | 0.648242 | 3_2:+47207867 | Msa0407920:CDS |
| CCCAGGTGAAATCTTTAAGG+AGG | 0.655968 | 3_2:+47210161 | Msa0407920:CDS |
| TGCGGCCATGCAAATGATGT+GGG | 0.663238 | 3_2:+47209698 | Msa0407920:CDS |
| ACAACTCCATAGAATGTGAG+AGG | 0.673388 | 3_2:-47210582 | None:intergenic |
| ATCTTCTCAAAGTTACATGG+AGG | 0.681695 | 3_2:+47210625 | Msa0407920:CDS |
| AAATGATGTGGGACATCAAG+TGG | 0.684085 | 3_2:+47209709 | Msa0407920:CDS |
| TGCTTGGAGGATATCTGGTG+CGG | 0.697268 | 3_2:+47209680 | Msa0407920:CDS |
| GCATCAGGCAACGTCCCTGG+AGG | 0.700780 | 3_2:+47210252 | Msa0407920:CDS |
| AGCAATGAAAGAAATGAACA+TGG | 0.705741 | 3_2:-47210484 | None:intergenic |
| CCTTATGAGTCATACATGTG+TGG | 0.718357 | 3_2:+47207862 | Msa0407920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAGATACATTTAAAAT+TGG | + | chr3_2:47208056-47208075 | Msa0407920:intron | 10.0% |
| !! | TACATATATTAAATATTATC+TGG | + | chr3_2:47208088-47208107 | Msa0407920:intron | 10.0% |
| !! | ACATATATTAAATATTATCT+GGG | + | chr3_2:47208089-47208108 | Msa0407920:intron | 10.0% |
| !!! | TTAAAATAGAAGTTTTTTAT+TGG | - | chr3_2:47208946-47208965 | None:intergenic | 10.0% |
| !! | AGTAAGAACAAAAAAAAAAT+TGG | + | chr3_2:47207976-47207995 | Msa0407920:intron | 15.0% |
| !!! | TATTTTCTTATATATAAGAC+CGG | - | chr3_2:47208031-47208050 | None:intergenic | 15.0% |
| !!! | TGTTTTTAATATAAACCTAA+CGG | - | chr3_2:47208265-47208284 | None:intergenic | 15.0% |
| !!! | GATTAATTTCATATTTTTAG+TGG | + | chr3_2:47208505-47208524 | Msa0407920:intron | 15.0% |
| !!! | TTTTAAGAATACTCATTTTA+AGG | - | chr3_2:47208792-47208811 | None:intergenic | 15.0% |
| !! | ATTCTTAAAAAAGAAATGAA+CGG | + | chr3_2:47208802-47208821 | Msa0407920:intron | 15.0% |
| !! | TAATTTATCATTTCAACATA+TGG | + | chr3_2:47209855-47209874 | Msa0407920:intron | 15.0% |
| !!! | ATAGATTTTTTTTAAGAAGT+AGG | - | chr3_2:47210028-47210047 | None:intergenic | 15.0% |
| !!! | GTTTACCTATATTTTTTTAG+CGG | + | chr3_2:47208147-47208166 | Msa0407920:intron | 20.0% |
| !!! | TTTACCTATATTTTTTTAGC+GGG | + | chr3_2:47208148-47208167 | Msa0407920:intron | 20.0% |
| !!! | GTTTTTAATATAAACCTAAC+GGG | - | chr3_2:47208264-47208283 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAAAAAACACCGA+CGG | + | chr3_2:47208613-47208632 | Msa0407920:intron | 20.0% |
| !! | AAGAAAGAAATCAAAACAAA+TGG | + | chr3_2:47209176-47209195 | Msa0407920:CDS | 20.0% |
| !! | AGAAAGAAATCAAAACAAAT+GGG | + | chr3_2:47209177-47209196 | Msa0407920:CDS | 20.0% |
| !!! | TGAAAAAGATATGACATTTT+TGG | + | chr3_2:47209263-47209282 | Msa0407920:CDS | 20.0% |
| !!! | GAGATCATATGATATTTTTA+AGG | + | chr3_2:47209783-47209802 | Msa0407920:intron | 20.0% |
| !! | AATACAAAAAACTAAATGGA+AGG | - | chr3_2:47209953-47209972 | None:intergenic | 20.0% |
| !!! | AGTCTTTTAATATACTATAC+AGG | - | chr3_2:47210096-47210115 | None:intergenic | 20.0% |
| !!! | TGTTTTATTATATTGCATTG+TGG | + | chr3_2:47210694-47210713 | Msa0407920:three_prime_UTR | 20.0% |
| !! | ACTCTATTTGTATCATTATA+AGG | + | chr3_2:47210841-47210860 | Msa0407920:three_prime_UTR | 20.0% |
| !!! | TTACCTATATTTTTTTAGCG+GGG | + | chr3_2:47208149-47208168 | Msa0407920:intron | 25.0% |
| !!! | TTTTTTTAAAAAACACCGAC+GGG | + | chr3_2:47208614-47208633 | Msa0407920:intron | 25.0% |
| ! | GTCAATAATCTGTCTAAATA+GGG | - | chr3_2:47208729-47208748 | None:intergenic | 25.0% |
| ! | CTATTTAGACAGATTATTGA+CGG | + | chr3_2:47208728-47208747 | Msa0407920:intron | 25.0% |
| ! | TATTTAGACAGATTATTGAC+GGG | + | chr3_2:47208729-47208748 | Msa0407920:intron | 25.0% |
| !!! | CATTTTAAGGATGGTAAAAA+GGG | - | chr3_2:47208779-47208798 | None:intergenic | 25.0% |
| !!! | TCATTTTAAGGATGGTAAAA+AGG | - | chr3_2:47208780-47208799 | None:intergenic | 25.0% |
| !!! | AAGAATACTCATTTTAAGGA+TGG | - | chr3_2:47208788-47208807 | None:intergenic | 25.0% |
| !!! | ATAAAAAAGTGTCATAGCTA+AGG | - | chr3_2:47208972-47208991 | None:intergenic | 25.0% |
| ! | AGATTCTCCTTCAAAAAAAA+TGG | + | chr3_2:47209221-47209240 | Msa0407920:CDS | 25.0% |
| !!! | GAATCTTCCATTTTTTTTGA+AGG | - | chr3_2:47209231-47209250 | None:intergenic | 25.0% |
| ! | AGAGCTTAATTCAAAAGTAA+AGG | + | chr3_2:47209320-47209339 | Msa0407920:CDS | 25.0% |
| ! | TTTATTACTTGTAGCAATGA+AGG | + | chr3_2:47209359-47209378 | Msa0407920:CDS | 25.0% |
| !!! | CATATGATATTTTTAAGGCA+AGG | + | chr3_2:47209788-47209807 | Msa0407920:intron | 25.0% |
| !!! | TTAATCAGAGCTTAGTTTTA+TGG | - | chr3_2:47209900-47209919 | None:intergenic | 25.0% |
| ! | TCGGAATACAAAAAACTAAA+TGG | - | chr3_2:47209957-47209976 | None:intergenic | 25.0% |
| !!! | CTGTTTTAACTATATGTGAA+TGG | + | chr3_2:47210069-47210088 | Msa0407920:intron | 25.0% |
| ! | TTGAGAAGATCAAGATATAA+CGG | - | chr3_2:47210615-47210634 | None:intergenic | 25.0% |
| !! | TTTTTCTTTGACTCATAGTT+TGG | + | chr3_2:47210745-47210764 | Msa0407920:three_prime_UTR | 25.0% |
| !! | GTTTATTATGTTTAGAGTAC+TGG | + | chr3_2:47210798-47210817 | Msa0407920:three_prime_UTR | 25.0% |
| ! | GTTAAGAAGAAGCACATATT+CGG | + | chr3_2:47207808-47207827 | Msa0407920:CDS | 30.0% |
| TTCTTATATATAAGACCGGA+GGG | - | chr3_2:47208027-47208046 | None:intergenic | 30.0% | |
| TTTCTTATATATAAGACCGG+AGG | - | chr3_2:47208028-47208047 | None:intergenic | 30.0% | |
| CGTCAATAATCTGTCTAAAT+AGG | - | chr3_2:47208730-47208749 | None:intergenic | 30.0% | |
| !!! | GCTATGACACTTTTTTATAG+AGG | + | chr3_2:47208974-47208993 | Msa0407920:intron | 30.0% |
| ATCATAGTTATGTATTGCAG+AGG | + | chr3_2:47209149-47209168 | Msa0407920:intron | 30.0% | |
| AAATCAAAACAAATGGGAGA+AGG | + | chr3_2:47209183-47209202 | Msa0407920:CDS | 30.0% | |
| !! | TTGTTGATTTATGCTCTGAA+AGG | - | chr3_2:47209595-47209614 | None:intergenic | 30.0% |
| ! | AACTAAGCTCTGATTAAAAG+TGG | + | chr3_2:47209903-47209922 | Msa0407920:intron | 30.0% |
| !! | TTCTAGATAAAAGCATTGAG+TGG | + | chr3_2:47210196-47210215 | Msa0407920:CDS | 30.0% |
| ! | TTTGCTGTATCTTCATTAGT+TGG | + | chr3_2:47210327-47210346 | Msa0407920:CDS | 30.0% |
| AGCAATGAAAGAAATGAACA+TGG | - | chr3_2:47210487-47210506 | None:intergenic | 30.0% | |
| ATGTTCATTTCTTTCATTGC+TGG | + | chr3_2:47210486-47210505 | Msa0407920:CDS | 30.0% | |
| ACAGATAAATATTCCAAGAG+TGG | + | chr3_2:47210525-47210544 | Msa0407920:CDS | 30.0% | |
| TTGATCTTCTCAAAGTTACA+TGG | + | chr3_2:47210622-47210641 | Msa0407920:CDS | 30.0% | |
| ! | ATTATCTGGGACGACAAAAT+CGG | + | chr3_2:47208102-47208121 | Msa0407920:intron | 35.0% |
| !!! | CTATATTTTTTTAGCGGGGT+GGG | + | chr3_2:47208153-47208172 | Msa0407920:intron | 35.0% |
| ! | TGAAATTTTGAACCCATTGC+TGG | + | chr3_2:47208177-47208196 | Msa0407920:intron | 35.0% |
| !!! | TCATTTCCCTACTTTTTAGC+GGG | - | chr3_2:47208224-47208243 | None:intergenic | 35.0% |
| !!! | CTCATTTCCCTACTTTTTAG+CGG | - | chr3_2:47208225-47208244 | None:intergenic | 35.0% |
| GCTAAAAAGTAGGGAAATGA+GGG | + | chr3_2:47208224-47208243 | Msa0407920:intron | 35.0% | |
| CTAAAAAGTAGGGAAATGAG+GGG | + | chr3_2:47208225-47208244 | Msa0407920:intron | 35.0% | |
| TAAAAAGTAGGGAAATGAGG+GGG | + | chr3_2:47208226-47208245 | Msa0407920:intron | 35.0% | |
| GGGAGAAGGAAATCAAAAAA+TGG | + | chr3_2:47209197-47209216 | Msa0407920:CDS | 35.0% | |
| !!! | TTTTTGGCTGTAGCAAAAAG+TGG | + | chr3_2:47209279-47209298 | Msa0407920:CDS | 35.0% |
| AAGTGGCGTAGTTGAAATTA+TGG | + | chr3_2:47209296-47209315 | Msa0407920:CDS | 35.0% | |
| GAATTACCAGCAAAGAAAAG+TGG | + | chr3_2:47209381-47209400 | Msa0407920:CDS | 35.0% | |
| ! | CATTGTCAGAGTTAGTTTCA+TGG | - | chr3_2:47209494-47209513 | None:intergenic | 35.0% |
| ! | TGTTGCTTCTATGATGGTAA+TGG | - | chr3_2:47210128-47210147 | None:intergenic | 35.0% |
| ! | CTTCTTTGTTGCTTCTATGA+TGG | - | chr3_2:47210134-47210153 | None:intergenic | 35.0% |
| CATCATAGAAGCAACAAAGA+AGG | + | chr3_2:47210132-47210151 | Msa0407920:CDS | 35.0% | |
| TCCTTTCTATACTCACTTCT+CGG | + | chr3_2:47210382-47210401 | Msa0407920:CDS | 35.0% | |
| ! | TTGCCAATGAAGCTTCTTTT+TGG | + | chr3_2:47210432-47210451 | Msa0407920:CDS | 35.0% |
| AAGCCAAAAAGAAGCTTCAT+TGG | - | chr3_2:47210438-47210457 | None:intergenic | 35.0% | |
| AGAAATGAACATGGCAACAA+TGG | - | chr3_2:47210478-47210497 | None:intergenic | 35.0% | |
| ATAGAACAAGATACCACTCT+TGG | - | chr3_2:47210541-47210560 | None:intergenic | 35.0% | |
| ! | GATCAAGATATAACGGAAAC+TGG | - | chr3_2:47210608-47210627 | None:intergenic | 35.0% |
| ATCTTCTCAAAGTTACATGG+AGG | + | chr3_2:47210625-47210644 | Msa0407920:CDS | 35.0% | |
| TGGATTGAAACTCATGAGTT+TGG | + | chr3_2:47210714-47210733 | Msa0407920:three_prime_UTR | 35.0% | |
| TCATAAATGCTTCCAAGAGC+TGG | - | chr3_2:47207837-47207856 | None:intergenic | 40.0% | |
| CCACACATGTATGACTCATA+AGG | - | chr3_2:47207865-47207884 | None:intergenic | 40.0% | |
| CCTTATGAGTCATACATGTG+TGG | + | chr3_2:47207862-47207881 | Msa0407920:CDS | 40.0% | |
| TATGAGTCATACATGTGTGG+TGG | + | chr3_2:47207865-47207884 | Msa0407920:CDS | 40.0% | |
| ATGAGTCATACATGTGTGGT+GGG | + | chr3_2:47207866-47207885 | Msa0407920:CDS | 40.0% | |
| TCATGTTCTCCGTAATCCAA+GGG | - | chr3_2:47207898-47207917 | None:intergenic | 40.0% | |
| !! | TTGAAAGTGTCATGCACGAA+AGG | + | chr3_2:47207947-47207966 | Msa0407920:CDS | 40.0% |
| GACTTAATAACTACTCCCTC+CGG | + | chr3_2:47208009-47208028 | Msa0407920:intron | 40.0% | |
| CCACCCCGCTAAAAAAATAT+AGG | - | chr3_2:47208155-47208174 | None:intergenic | 40.0% | |
| !!! | CCTATATTTTTTTAGCGGGG+TGG | + | chr3_2:47208152-47208171 | Msa0407920:intron | 40.0% |
| ! | TTTTGAACCCATTGCTGGTA+AGG | + | chr3_2:47208182-47208201 | Msa0407920:intron | 40.0% |
| CGCTAAAAAGTAGGGAAATG+AGG | + | chr3_2:47208223-47208242 | Msa0407920:intron | 40.0% | |
| TTTATGGCAGACCGACAAAT+TGG | - | chr3_2:47208648-47208667 | None:intergenic | 40.0% | |
| ! | TCTCACCTTGTCTCGTTTTA+TGG | - | chr3_2:47208664-47208683 | None:intergenic | 40.0% |
| GTCAACTAGATATGTAGGGT+TGG | - | chr3_2:47208690-47208709 | None:intergenic | 40.0% | |
| ! | CGGTGTCAACTAGATATGTA+GGG | - | chr3_2:47208694-47208713 | None:intergenic | 40.0% |
| !! | GTAAAGGCATCTGACAAGAA+AGG | + | chr3_2:47209336-47209355 | Msa0407920:CDS | 40.0% |
| !!! | TTTGTGCCACTTTTCTTTGC+TGG | - | chr3_2:47209390-47209409 | None:intergenic | 40.0% |
| TATTTGCGTGCAGCAAAACA+TGG | + | chr3_2:47209420-47209439 | Msa0407920:CDS | 40.0% | |
| TTCAAGTGCACGCATGATTT+CGG | - | chr3_2:47209451-47209470 | None:intergenic | 40.0% | |
| CACACAACGAAAAAACTGCT+TGG | + | chr3_2:47209664-47209683 | Msa0407920:CDS | 40.0% | |
| ACAACGAAAAAACTGCTTGG+AGG | + | chr3_2:47209667-47209686 | Msa0407920:CDS | 40.0% | |
| AAAACTGCTTGGAGGATATC+TGG | + | chr3_2:47209675-47209694 | Msa0407920:CDS | 40.0% | |
| AAATGATGTGGGACATCAAG+TGG | + | chr3_2:47209709-47209728 | Msa0407920:CDS | 40.0% | |
| !! | CTTCTATGATGGTAATGGTC+TGG | - | chr3_2:47210123-47210142 | None:intergenic | 40.0% |
| AACAAAGAAGGAAAAACCCC+AGG | + | chr3_2:47210144-47210163 | Msa0407920:CDS | 40.0% | |
| AACCCCAGGTGAAATCTTTA+AGG | + | chr3_2:47210158-47210177 | Msa0407920:CDS | 40.0% | |
| CTCCTTAAAGATTTCACCTG+GGG | - | chr3_2:47210163-47210182 | None:intergenic | 40.0% | |
| CCTCCTTAAAGATTTCACCT+GGG | - | chr3_2:47210164-47210183 | None:intergenic | 40.0% | |
| TCCTCCTTAAAGATTTCACC+TGG | - | chr3_2:47210165-47210184 | None:intergenic | 40.0% | |
| ACAGGGAAACCAACATTTGA+AGG | + | chr3_2:47210285-47210304 | Msa0407920:CDS | 40.0% | |
| CAGGGAAACCAACATTTGAA+GGG | + | chr3_2:47210286-47210305 | Msa0407920:CDS | 40.0% | |
| ACAGCAAATCCTTCAAATGC+TGG | - | chr3_2:47210315-47210334 | None:intergenic | 40.0% | |
| TCCGAGAAGTGAGTATAGAA+AGG | - | chr3_2:47210386-47210405 | None:intergenic | 40.0% | |
| ACAACTCCATAGAATGTGAG+AGG | - | chr3_2:47210585-47210604 | None:intergenic | 40.0% | |
| TCTCAAAGTTACATGGAGGA+AGG | + | chr3_2:47210629-47210648 | Msa0407920:CDS | 40.0% | |
| TTAACACCCTTGATACTTGG+TGG | - | chr3_2:47210660-47210679 | None:intergenic | 40.0% | |
| AGCTTAACACCCTTGATACT+TGG | - | chr3_2:47210663-47210682 | None:intergenic | 40.0% | |
| TGAGTCATACATGTGTGGTG+GGG | + | chr3_2:47207867-47207886 | Msa0407920:CDS | 45.0% | |
| GTCATGTTCTCCGTAATCCA+AGG | - | chr3_2:47207899-47207918 | None:intergenic | 45.0% | |
| AGTGTCATGCACGAAAGGAA+AGG | + | chr3_2:47207952-47207971 | Msa0407920:CDS | 45.0% | |
| !!! | TTTTAGCGGGTTAGGCGTAT+CGG | - | chr3_2:47208211-47208230 | None:intergenic | 45.0% |
| GCCTAACCCGCTAAAAAGTA+GGG | + | chr3_2:47208215-47208234 | Msa0407920:intron | 45.0% | |
| !!! | TCCCTACTTTTTAGCGGGTT+AGG | - | chr3_2:47208219-47208238 | None:intergenic | 45.0% |
| GTCTGCCATAAAACGAGACA+AGG | + | chr3_2:47208656-47208675 | Msa0407920:intron | 45.0% | |
| ! | GCGGTGTCAACTAGATATGT+AGG | - | chr3_2:47208695-47208714 | None:intergenic | 45.0% |
| TCTAAATAGGGCGCATAGTG+GGG | - | chr3_2:47208717-47208736 | None:intergenic | 45.0% | |
| GTCTAAATAGGGCGCATAGT+GGG | - | chr3_2:47208718-47208737 | None:intergenic | 45.0% | |
| TGTCTAAATAGGGCGCATAG+TGG | - | chr3_2:47208719-47208738 | None:intergenic | 45.0% | |
| TAGACAACCGCAAGTTGTTG+AGG | + | chr3_2:47209542-47209561 | Msa0407920:CDS | 45.0% | |
| AGACAACCGCAAGTTGTTGA+GGG | + | chr3_2:47209543-47209562 | Msa0407920:CDS | 45.0% | |
| GTTGTGGAAGAGGCTTTCTA+TGG | + | chr3_2:47209566-47209585 | Msa0407920:CDS | 45.0% | |
| GATGTCCCACATCATTTGCA+TGG | - | chr3_2:47209706-47209725 | None:intergenic | 45.0% | |
| ! | CCCAGGTGAAATCTTTAAGG+AGG | + | chr3_2:47210161-47210180 | Msa0407920:CDS | 45.0% |
| TCATGCTCAGTTGTAGCATC+AGG | + | chr3_2:47210237-47210256 | Msa0407920:CDS | 45.0% | |
| GAATGTGAGAGGCAAGCAAA+TGG | - | chr3_2:47210574-47210593 | None:intergenic | 45.0% | |
| TGCTTGCCTCTCACATTCTA+TGG | + | chr3_2:47210576-47210595 | Msa0407920:CDS | 45.0% | |
| !! | TCAAGGGTGTTAAGCTGTAG+AGG | + | chr3_2:47210667-47210686 | Msa0407920:CDS | 45.0% |
| !! | GTATAAATATATAAATTTAT+AGG | - | chr3_2:47208566-47208585 | None:intergenic | 5.0% |
| !!! | AAAAAATAAAAATGTTTTTT+CGG | - | chr3_2:47209976-47209995 | None:intergenic | 5.0% |
| CATATTCGGTAGCCAGCTCT+TGG | + | chr3_2:47207822-47207841 | Msa0407920:CDS | 50.0% | |
| ! | TCTGGGACGACAAAATCGGT+TGG | + | chr3_2:47208106-47208125 | Msa0407920:intron | 50.0% |
| CAAAATCGGTTGGATCCGTC+AGG | + | chr3_2:47208116-47208135 | Msa0407920:intron | 50.0% | |
| GGTAAACGAGTCCAACCTGA+CGG | - | chr3_2:47208134-47208153 | None:intergenic | 50.0% | |
| TCGGACACCTTACCAGCAAT+GGG | - | chr3_2:47208192-47208211 | None:intergenic | 50.0% | |
| ATCGGACACCTTACCAGCAA+TGG | - | chr3_2:47208193-47208212 | None:intergenic | 50.0% | |
| CGCCTAACCCGCTAAAAAGT+AGG | + | chr3_2:47208214-47208233 | Msa0407920:intron | 50.0% | |
| AAAGTAGGGAAATGAGGGGG+CGG | + | chr3_2:47208229-47208248 | Msa0407920:intron | 50.0% | |
| TCCTCCGTATAGTGTGTGTG+TGG | + | chr3_2:47208342-47208361 | Msa0407920:intron | 50.0% | |
| CCTCCGTATAGTGTGTGTGT+GGG | + | chr3_2:47208343-47208362 | Msa0407920:intron | 50.0% | |
| CTCCGTATAGTGTGTGTGTG+GGG | + | chr3_2:47208344-47208363 | Msa0407920:intron | 50.0% | |
| TCCGTATAGTGTGTGTGTGG+GGG | + | chr3_2:47208345-47208364 | Msa0407920:intron | 50.0% | |
| !! | AAATTGGCGGGTTAACCCGT+CGG | - | chr3_2:47208632-47208651 | None:intergenic | 50.0% |
| GGGTTAACCCGCCAATTTGT+CGG | + | chr3_2:47208634-47208653 | Msa0407920:intron | 50.0% | |
| ATGGCAGACCGACAAATTGG+CGG | - | chr3_2:47208645-47208664 | None:intergenic | 50.0% | |
| GATTATTGACGGGACGAGAC+CGG | + | chr3_2:47208739-47208758 | Msa0407920:intron | 50.0% | |
| ATTATTGACGGGACGAGACC+GGG | + | chr3_2:47208740-47208759 | Msa0407920:intron | 50.0% | |
| GACAACCGCAAGTTGTTGAG+GGG | + | chr3_2:47209544-47209563 | Msa0407920:CDS | 50.0% | |
| CACAACCCCTCAACAACTTG+CGG | - | chr3_2:47209552-47209571 | None:intergenic | 50.0% | |
| TTGTTGAGGGGTTGTGGAAG+AGG | + | chr3_2:47209556-47209575 | Msa0407920:CDS | 50.0% | |
| TGCTTGGAGGATATCTGGTG+CGG | + | chr3_2:47209680-47209699 | Msa0407920:CDS | 50.0% | |
| TGCGGCCATGCAAATGATGT+GGG | + | chr3_2:47209698-47209717 | Msa0407920:CDS | 50.0% | |
| GTGGGACATCAAGTGGTACA+AGG | + | chr3_2:47209716-47209735 | Msa0407920:CDS | 50.0% | |
| CTGTTTCCTGATTGCCTCCA+GGG | - | chr3_2:47210269-47210288 | None:intergenic | 50.0% | |
| CTGGAGGCAATCAGGAAACA+GGG | + | chr3_2:47210268-47210287 | Msa0407920:CDS | 50.0% | |
| GCTGGTTGCCCTTCAAATGT+TGG | - | chr3_2:47210297-47210316 | None:intergenic | 50.0% | |
| GAAGGGCAACCAGCATTTGA+AGG | + | chr3_2:47210303-47210322 | Msa0407920:CDS | 50.0% | |
| GTGCCACCACCAAGTATCAA+GGG | + | chr3_2:47210651-47210670 | Msa0407920:CDS | 50.0% | |
| ! | ACACCCTTGATACTTGGTGG+TGG | - | chr3_2:47210657-47210676 | None:intergenic | 50.0% |
| GGGGCTCATCCCTTGGATTA+CGG | + | chr3_2:47207886-47207905 | Msa0407920:CDS | 55.0% | |
| ATCGGTTGGATCCGTCAGGT+TGG | + | chr3_2:47208120-47208139 | Msa0407920:intron | 55.0% | |
| AAGTAGGGAAATGAGGGGGC+GGG | + | chr3_2:47208230-47208249 | Msa0407920:intron | 55.0% | |
| CCCACACACACACTATACGG+AGG | - | chr3_2:47208346-47208365 | None:intergenic | 55.0% | |
| CCCCCCACACACACACTATA+CGG | - | chr3_2:47208349-47208368 | None:intergenic | 55.0% | |
| CCGTATAGTGTGTGTGTGGG+GGG | + | chr3_2:47208346-47208365 | Msa0407920:intron | 55.0% | |
| CGTATAGTGTGTGTGTGGGG+GGG | + | chr3_2:47208347-47208366 | Msa0407920:intron | 55.0% | |
| TGGCAGACCGACAAATTGGC+GGG | - | chr3_2:47208644-47208663 | None:intergenic | 55.0% | |
| ! | AAATAGGGCGCATAGTGGGG+CGG | - | chr3_2:47208714-47208733 | None:intergenic | 55.0% |
| CGCAAGTTGTTGAGGGGTTG+TGG | + | chr3_2:47209550-47209569 | Msa0407920:CDS | 55.0% | |
| GTGCGGCCATGCAAATGATG+TGG | + | chr3_2:47209697-47209716 | Msa0407920:CDS | 55.0% | |
| CCTGTTTCCTGATTGCCTCC+AGG | - | chr3_2:47210270-47210289 | None:intergenic | 55.0% | |
| CCTGGAGGCAATCAGGAAAC+AGG | + | chr3_2:47210267-47210286 | Msa0407920:CDS | 55.0% | |
| ! | GGTGCCACCACCAAGTATCA+AGG | + | chr3_2:47210650-47210669 | Msa0407920:CDS | 55.0% |
| ATAGTGTGTGTGTGGGGGGG+TGG | + | chr3_2:47208350-47208369 | Msa0407920:intron | 60.0% | |
| TAGTGTGTGTGTGGGGGGGT+GGG | + | chr3_2:47208351-47208370 | Msa0407920:intron | 60.0% | |
| GTAGCATCAGGCAACGTCCC+TGG | + | chr3_2:47210249-47210268 | Msa0407920:CDS | 60.0% | |
| CAACGTCCCTGGAGGCAATC+AGG | + | chr3_2:47210260-47210279 | Msa0407920:CDS | 60.0% | |
| ! | GTGTGGTGGGGCTCATCCCT+TGG | + | chr3_2:47207879-47207898 | Msa0407920:CDS | 65.0% |
| TAGGGAAATGAGGGGGCGGG+AGG | + | chr3_2:47208233-47208252 | Msa0407920:intron | 65.0% | |
| AGGGAAATGAGGGGGCGGGA+GGG | + | chr3_2:47208234-47208253 | Msa0407920:intron | 65.0% | |
| ATTGACGGGACGAGACCGGG+CGG | + | chr3_2:47208743-47208762 | Msa0407920:intron | 65.0% | |
| AAGGGTCAATCCGCTCCGCC+CGG | - | chr3_2:47208761-47208780 | None:intergenic | 65.0% | |
| GCATCAGGCAACGTCCCTGG+AGG | + | chr3_2:47210252-47210271 | Msa0407920:CDS | 65.0% | |
| GGCGGGAGGGTTGACCCGTT+AGG | + | chr3_2:47208247-47208266 | Msa0407920:intron | 70.0% | |
| ! | CGGGACGAGACCGGGCGGAG+CGG | + | chr3_2:47208748-47208767 | Msa0407920:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 47207799 | 47210889 | 47207799 | ID=Msa0407920;Name=Msa0407920 |
| chr3_2 | mRNA | 47207799 | 47210889 | 47207799 | ID=Msa0407920-mRNA-1;Parent=Msa0407920;Name=Msa0407920-mRNA-1;_AED=0.07;_eAED=0.08;_QI=0|1|0.33|1|1|1|3|203|442 |
| chr3_2 | exon | 47207799 | 47207973 | 47207799 | ID=Msa0407920-mRNA-1:exon:9058;Parent=Msa0407920-mRNA-1 |
| chr3_2 | exon | 47209169 | 47209737 | 47209169 | ID=Msa0407920-mRNA-1:exon:9059;Parent=Msa0407920-mRNA-1 |
| chr3_2 | exon | 47210102 | 47210889 | 47210102 | ID=Msa0407920-mRNA-1:exon:9060;Parent=Msa0407920-mRNA-1 |
| chr3_2 | CDS | 47207799 | 47207973 | 47207799 | ID=Msa0407920-mRNA-1:cds;Parent=Msa0407920-mRNA-1 |
| chr3_2 | CDS | 47209169 | 47209737 | 47209169 | ID=Msa0407920-mRNA-1:cds;Parent=Msa0407920-mRNA-1 |
| chr3_2 | CDS | 47210102 | 47210686 | 47210102 | ID=Msa0407920-mRNA-1:cds;Parent=Msa0407920-mRNA-1 |
| chr3_2 | three_prime_UTR | 47210687 | 47210889 | 47210687 | ID=Msa0407920-mRNA-1:three_prime_utr;Parent=Msa0407920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
