Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474670 | XP_003602742.1 | 96.324 | 272 | 9 | 1 | 1 | 271 | 1 | 272 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474670 | sp|Q55CU8|PITC_DICDI | 35.437 | 206 | 124 | 4 | 66 | 263 | 73 | 277 | 5.81e-27 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474670 | G7J392 | 96.324 | 272 | 9 | 1 | 1 | 271 | 1 | 272 | 0.0 | 531 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0064240 | Msa0474670 | 0.818211 | 2.205860e-52 | -8.615850e-47 |
| Msa0080820 | Msa0474670 | -0.800288 | 1.546278e-48 | -8.615850e-47 |
| Msa0087580 | Msa0474670 | 0.800429 | 1.447059e-48 | -8.615850e-47 |
| Msa0134300 | Msa0474670 | 0.800885 | 1.168319e-48 | -8.615850e-47 |
| Msa0134390 | Msa0474670 | 0.802668 | 5.029937e-49 | -8.615850e-47 |
| Msa0173380 | Msa0474670 | -0.819581 | 1.077269e-52 | -8.615850e-47 |
| Msa0371350 | Msa0474670 | 0.800707 | 1.270408e-48 | -8.615850e-47 |
| Msa0408490 | Msa0474670 | 0.805462 | 1.319358e-49 | -8.615850e-47 |
| Msa0434090 | Msa0474670 | -0.802435 | 5.617319e-49 | -8.615850e-47 |
| Msa0474670 | Msa0490200 | 0.803875 | 2.829301e-49 | -8.615850e-47 |
| Msa0474670 | Msa0501540 | 0.804718 | 1.888378e-49 | -8.615850e-47 |
| Msa0474670 | Msa0572270 | 0.806736 | 7.115643e-50 | -8.615850e-47 |
| Msa0474670 | Msa0598470 | 0.812562 | 3.983424e-51 | -8.615850e-47 |
| Msa0474670 | Msa0612520 | -0.813386 | 2.627468e-51 | -8.615850e-47 |
| Msa0474670 | Msa0620900 | -0.804885 | 1.742641e-49 | -8.615850e-47 |
| Msa0474670 | Msa0638300 | 0.807527 | 4.840422e-50 | -8.615850e-47 |
| Msa0474670 | Msa0660090 | -0.802484 | 5.488371e-49 | -8.615850e-47 |
| Msa0474670 | Msa0667840 | 0.821063 | 4.928124e-53 | -8.615850e-47 |
| Msa0474670 | Msa0677250 | 0.800013 | 1.758360e-48 | -8.615850e-47 |
| Msa0474670 | Msa0685390 | 0.809058 | 2.283125e-50 | -8.615850e-47 |
| Msa0474670 | Msa0712670 | 0.808064 | 3.721823e-50 | -8.615850e-47 |
| Msa0474670 | Msa0714230 | 0.840433 | 8.723492e-58 | -8.615850e-47 |
| Msa0474670 | Msa0866510 | 0.808798 | 2.594454e-50 | -8.615850e-47 |
| Msa0474670 | Msa0978980 | -0.816602 | 5.082278e-52 | -8.615850e-47 |
| Msa0474670 | Msa1082640 | 0.800561 | 1.360245e-48 | -8.615850e-47 |
| Msa0474670 | Msa1130780 | -0.812638 | 3.832911e-51 | -8.615850e-47 |
| Msa0474670 | Msa1136970 | 0.812714 | 3.689987e-51 | -8.615850e-47 |
| Msa0474670 | Msa1154630 | -0.802013 | 6.862588e-49 | -8.615850e-47 |
| Msa0474670 | Msa1196210 | 0.813993 | 1.931517e-51 | -8.615850e-47 |
| Msa0474670 | Msa1202220 | 0.826713 | 2.333068e-54 | -8.615850e-47 |
| Msa0474670 | Msa1287100 | 0.800532 | 1.378865e-48 | -8.615850e-47 |
| Msa0474670 | Msa1296270 | 0.814646 | 1.385898e-51 | -8.615850e-47 |
| Msa0474670 | Msa1414000 | 0.805045 | 1.613422e-49 | -8.615850e-47 |
| Msa0474670 | Msa1427600 | 0.827124 | 1.859892e-54 | -8.615850e-47 |
| Msa0474670 | Msa1430630 | 0.829376 | 5.327981e-55 | -8.615850e-47 |
| Msa0474670 | Msa1434710 | 0.801780 | 7.659868e-49 | -8.615850e-47 |
| Msa0262750 | Msa0474670 | -0.808414 | 3.133912e-50 | -8.615850e-47 |
| Msa0300470 | Msa0474670 | -0.809757 | 1.616348e-50 | -8.615850e-47 |
| Msa0336430 | Msa0474670 | -0.800061 | 1.719976e-48 | -8.615850e-47 |
| Msa0337970 | Msa0474670 | -0.808610 | 2.845431e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474670 | MtrunA17_Chr3g0131581 | 96.324 | 272 | 9 | 1 | 1 | 271 | 1 | 272 | 0.0 | 531 |
| Msa0474670 | MtrunA17_Chr8g0385691 | 75.431 | 232 | 57 | 0 | 40 | 271 | 21 | 252 | 9.13e-135 | 380 |
| Msa0474670 | MtrunA17_Chr8g0385681 | 74.026 | 231 | 60 | 0 | 40 | 270 | 24 | 254 | 1.83e-131 | 372 |
| Msa0474670 | MtrunA17_Chr1g0161441 | 37.975 | 237 | 138 | 4 | 39 | 270 | 5 | 237 | 1.03e-54 | 177 |
| Msa0474670 | MtrunA17_Chr1g0155071 | 31.224 | 237 | 152 | 6 | 34 | 262 | 7 | 240 | 1.50e-29 | 113 |
| Msa0474670 | MtrunA17_Chr4g0058791 | 32.558 | 172 | 114 | 2 | 65 | 235 | 68 | 238 | 6.36e-26 | 102 |
| Msa0474670 | MtrunA17_Chr4g0058811 | 32.515 | 163 | 108 | 2 | 65 | 226 | 70 | 231 | 1.84e-24 | 99.0 |
| Msa0474670 | MtrunA17_Chr7g0254621 | 28.986 | 207 | 131 | 5 | 64 | 262 | 42 | 240 | 2.28e-23 | 97.1 |
| Msa0474670 | MtrunA17_Chr3g0131071 | 30.476 | 210 | 132 | 4 | 66 | 261 | 247 | 456 | 3.69e-22 | 95.5 |
| Msa0474670 | MtrunA17_Chr3g0144891 | 32.794 | 247 | 145 | 9 | 35 | 261 | 62 | 307 | 6.18e-22 | 95.1 |
| Msa0474670 | MtrunA17_Chr3g0141821 | 31.797 | 217 | 129 | 6 | 68 | 266 | 93 | 308 | 8.10e-22 | 94.7 |
| Msa0474670 | MtrunA17_Chr1g0155521 | 29.856 | 278 | 173 | 11 | 10 | 266 | 51 | 327 | 3.62e-21 | 92.8 |
| Msa0474670 | MtrunA17_Chr4g0035361 | 33.019 | 212 | 123 | 7 | 68 | 261 | 1 | 211 | 1.30e-20 | 90.9 |
| Msa0474670 | MtrunA17_Chr5g0404711 | 31.535 | 241 | 143 | 8 | 43 | 263 | 50 | 288 | 4.20e-20 | 89.4 |
| Msa0474670 | MtrunA17_Chr1g0205531 | 27.778 | 198 | 137 | 3 | 43 | 235 | 12 | 208 | 4.31e-20 | 89.0 |
| Msa0474670 | MtrunA17_Chr5g0425421 | 28.000 | 175 | 122 | 3 | 64 | 237 | 44 | 215 | 6.05e-20 | 87.8 |
| Msa0474670 | MtrunA17_Chr7g0236461 | 29.804 | 255 | 150 | 10 | 28 | 261 | 64 | 310 | 7.79e-20 | 89.0 |
| Msa0474670 | MtrunA17_Chr3g0115591 | 27.706 | 231 | 150 | 8 | 40 | 261 | 22 | 244 | 1.59e-19 | 86.7 |
| Msa0474670 | MtrunA17_Chr2g0293201 | 29.524 | 210 | 132 | 6 | 66 | 261 | 142 | 349 | 2.49e-19 | 87.0 |
| Msa0474670 | MtrunA17_Chr4g0014911 | 27.632 | 304 | 173 | 10 | 2 | 261 | 44 | 344 | 4.86e-19 | 86.3 |
| Msa0474670 | MtrunA17_Chr8g0373391 | 28.846 | 208 | 141 | 6 | 62 | 265 | 39 | 243 | 4.96e-19 | 84.7 |
| Msa0474670 | MtrunA17_Chr8g0385291 | 28.814 | 295 | 169 | 11 | 3 | 261 | 97 | 386 | 5.17e-19 | 86.3 |
| Msa0474670 | MtrunA17_Chr3g0144911 | 32.093 | 215 | 127 | 7 | 65 | 261 | 107 | 320 | 5.52e-19 | 85.9 |
| Msa0474670 | MtrunA17_Chr8g0372651 | 31.507 | 219 | 129 | 7 | 62 | 261 | 73 | 289 | 5.83e-19 | 86.3 |
| Msa0474670 | MtrunA17_Chr4g0014901 | 29.911 | 224 | 120 | 7 | 63 | 261 | 266 | 477 | 6.68e-19 | 86.3 |
| Msa0474670 | MtrunA17_Chr4g0035391 | 31.513 | 238 | 143 | 8 | 43 | 261 | 81 | 317 | 1.25e-18 | 85.5 |
| Msa0474670 | MtrunA17_Chr5g0399151 | 29.515 | 227 | 127 | 5 | 62 | 263 | 109 | 327 | 1.45e-17 | 82.0 |
| Msa0474670 | MtrunA17_Chr4g0004981 | 28.372 | 215 | 128 | 7 | 66 | 261 | 123 | 330 | 1.47e-17 | 82.0 |
| Msa0474670 | MtrunA17_Chr3g0080051 | 29.796 | 245 | 151 | 8 | 36 | 261 | 71 | 313 | 7.67e-17 | 80.1 |
| Msa0474670 | MtrunA17_Chr8g0369291 | 29.779 | 272 | 166 | 12 | 10 | 261 | 35 | 301 | 1.03e-16 | 79.7 |
| Msa0474670 | MtrunA17_Chr7g0243541 | 25.000 | 200 | 116 | 3 | 63 | 261 | 111 | 277 | 8.05e-15 | 73.6 |
| Msa0474670 | MtrunA17_Chr4g0035381 | 28.311 | 219 | 136 | 6 | 62 | 261 | 78 | 294 | 3.46e-14 | 71.6 |
| Msa0474670 | MtrunA17_Chr1g0183881 | 28.507 | 221 | 129 | 9 | 61 | 261 | 142 | 353 | 2.25e-13 | 69.7 |
| Msa0474670 | MtrunA17_Chr3g0102691 | 25.822 | 213 | 124 | 7 | 68 | 257 | 33 | 234 | 1.22e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474670 | AT1G01630.1 | 65.368 | 231 | 80 | 0 | 41 | 271 | 25 | 255 | 2.78e-117 | 337 |
| Msa0474670 | AT1G14820.3 | 38.333 | 240 | 139 | 4 | 36 | 270 | 1 | 236 | 3.26e-49 | 163 |
| Msa0474670 | AT1G14820.2 | 39.815 | 216 | 124 | 3 | 60 | 270 | 9 | 223 | 6.43e-47 | 157 |
| Msa0474670 | AT1G14820.1 | 39.815 | 216 | 124 | 3 | 60 | 270 | 9 | 223 | 6.43e-47 | 157 |
| Msa0474670 | AT4G08690.2 | 30.531 | 226 | 150 | 5 | 40 | 261 | 16 | 238 | 7.01e-29 | 111 |
| Msa0474670 | AT4G08690.1 | 30.531 | 226 | 150 | 5 | 40 | 261 | 16 | 238 | 7.01e-29 | 111 |
| Msa0474670 | AT4G08690.3 | 30.531 | 226 | 150 | 5 | 40 | 261 | 16 | 238 | 7.01e-29 | 111 |
| Msa0474670 | AT1G75170.2 | 30.833 | 240 | 146 | 8 | 31 | 262 | 14 | 241 | 1.15e-26 | 105 |
| Msa0474670 | AT1G75170.1 | 30.833 | 240 | 146 | 8 | 31 | 262 | 14 | 241 | 1.15e-26 | 105 |
| Msa0474670 | AT1G22180.2 | 30.531 | 226 | 150 | 6 | 41 | 262 | 20 | 242 | 5.63e-24 | 99.0 |
| Msa0474670 | AT1G22180.4 | 30.531 | 226 | 150 | 6 | 41 | 262 | 20 | 242 | 5.63e-24 | 99.0 |
| Msa0474670 | AT4G36640.1 | 29.612 | 206 | 138 | 5 | 64 | 265 | 39 | 241 | 1.51e-23 | 97.4 |
| Msa0474670 | AT4G36640.3 | 29.612 | 206 | 138 | 5 | 64 | 265 | 39 | 241 | 1.51e-23 | 97.4 |
| Msa0474670 | AT5G63060.2 | 33.742 | 163 | 106 | 2 | 65 | 226 | 36 | 197 | 5.58e-23 | 94.4 |
| Msa0474670 | AT5G63060.1 | 33.742 | 163 | 106 | 2 | 65 | 226 | 71 | 232 | 8.99e-23 | 94.7 |
| Msa0474670 | AT4G34580.2 | 33.180 | 217 | 125 | 8 | 64 | 261 | 83 | 298 | 8.97e-22 | 94.7 |
| Msa0474670 | AT4G34580.1 | 33.180 | 217 | 125 | 8 | 64 | 261 | 83 | 298 | 8.97e-22 | 94.7 |
| Msa0474670 | AT4G39180.1 | 31.696 | 224 | 134 | 7 | 61 | 266 | 89 | 311 | 7.14e-21 | 92.4 |
| Msa0474670 | AT4G39180.3 | 31.696 | 224 | 134 | 7 | 61 | 266 | 89 | 311 | 7.26e-21 | 92.4 |
| Msa0474670 | AT4G39180.2 | 31.696 | 224 | 134 | 7 | 61 | 266 | 89 | 311 | 7.26e-21 | 92.4 |
| Msa0474670 | AT4G36490.1 | 31.050 | 219 | 130 | 7 | 62 | 261 | 72 | 288 | 1.60e-20 | 91.3 |
| Msa0474670 | AT1G30690.1 | 30.769 | 208 | 133 | 6 | 63 | 261 | 217 | 422 | 2.46e-20 | 90.5 |
| Msa0474670 | AT1G30690.2 | 30.769 | 208 | 133 | 6 | 63 | 261 | 217 | 422 | 2.46e-20 | 90.5 |
| Msa0474670 | AT2G16380.2 | 34.259 | 216 | 122 | 8 | 65 | 261 | 84 | 298 | 3.54e-20 | 90.1 |
| Msa0474670 | AT2G16380.1 | 34.259 | 216 | 122 | 8 | 65 | 261 | 84 | 298 | 3.54e-20 | 90.1 |
| Msa0474670 | AT2G18180.2 | 31.222 | 221 | 131 | 7 | 62 | 263 | 75 | 293 | 5.95e-20 | 89.7 |
| Msa0474670 | AT4G39170.2 | 31.250 | 272 | 165 | 9 | 10 | 261 | 49 | 318 | 6.07e-20 | 89.7 |
| Msa0474670 | AT4G39170.1 | 31.250 | 272 | 165 | 9 | 10 | 261 | 49 | 318 | 6.62e-20 | 89.4 |
| Msa0474670 | AT2G18180.1 | 31.222 | 221 | 131 | 7 | 62 | 263 | 75 | 293 | 6.92e-20 | 89.4 |
| Msa0474670 | AT4G09160.3 | 27.237 | 257 | 158 | 8 | 31 | 261 | 268 | 521 | 1.04e-19 | 89.0 |
| Msa0474670 | AT4G09160.2 | 27.237 | 257 | 158 | 8 | 31 | 261 | 268 | 521 | 1.05e-19 | 89.0 |
| Msa0474670 | AT4G09160.1 | 27.237 | 257 | 158 | 8 | 31 | 261 | 293 | 546 | 1.25e-19 | 89.0 |
| Msa0474670 | AT2G21540.3 | 31.674 | 221 | 132 | 7 | 61 | 263 | 88 | 307 | 1.32e-19 | 88.6 |
| Msa0474670 | AT2G21540.5 | 31.674 | 221 | 132 | 7 | 61 | 263 | 88 | 307 | 1.32e-19 | 88.6 |
| Msa0474670 | AT2G21540.6 | 31.674 | 221 | 132 | 7 | 61 | 263 | 88 | 307 | 1.43e-19 | 88.6 |
| Msa0474670 | AT2G21540.2 | 31.674 | 221 | 132 | 7 | 61 | 263 | 88 | 307 | 1.43e-19 | 88.6 |
| Msa0474670 | AT2G21540.1 | 31.674 | 221 | 132 | 7 | 61 | 263 | 88 | 307 | 1.43e-19 | 88.6 |
| Msa0474670 | AT2G21540.4 | 31.674 | 221 | 132 | 7 | 61 | 263 | 88 | 307 | 1.43e-19 | 88.6 |
| Msa0474670 | AT2G21520.2 | 32.870 | 216 | 124 | 7 | 65 | 261 | 111 | 324 | 1.45e-19 | 88.6 |
| Msa0474670 | AT2G21520.3 | 32.870 | 216 | 124 | 7 | 65 | 261 | 111 | 324 | 1.45e-19 | 88.6 |
| Msa0474670 | AT2G21520.1 | 32.870 | 216 | 124 | 7 | 65 | 261 | 107 | 320 | 1.51e-19 | 88.6 |
| Msa0474670 | AT2G18180.4 | 31.132 | 212 | 125 | 7 | 71 | 263 | 13 | 222 | 3.28e-19 | 87.0 |
| Msa0474670 | AT2G18180.3 | 31.132 | 212 | 125 | 7 | 71 | 263 | 13 | 222 | 4.52e-19 | 87.0 |
| Msa0474670 | AT1G19650.1 | 31.513 | 238 | 143 | 7 | 43 | 261 | 78 | 314 | 6.10e-19 | 86.7 |
| Msa0474670 | AT1G19650.3 | 31.933 | 238 | 142 | 7 | 43 | 261 | 78 | 314 | 6.61e-19 | 86.3 |
| Msa0474670 | AT1G05370.1 | 30.899 | 178 | 122 | 1 | 62 | 239 | 38 | 214 | 9.82e-19 | 85.5 |
| Msa0474670 | AT1G19650.2 | 30.932 | 236 | 142 | 7 | 44 | 261 | 10 | 242 | 1.00e-18 | 85.9 |
| Msa0474670 | AT1G75370.1 | 32.218 | 239 | 140 | 8 | 43 | 261 | 87 | 323 | 2.97e-18 | 84.7 |
| Msa0474670 | AT1G75370.2 | 32.218 | 239 | 140 | 8 | 43 | 261 | 87 | 323 | 4.25e-18 | 84.3 |
| Msa0474670 | AT5G47510.4 | 30.455 | 220 | 134 | 6 | 62 | 263 | 45 | 263 | 4.74e-17 | 80.5 |
| Msa0474670 | AT5G47510.1 | 30.455 | 220 | 134 | 6 | 62 | 263 | 44 | 262 | 5.19e-17 | 80.5 |
| Msa0474670 | AT5G47510.2 | 30.455 | 220 | 134 | 6 | 62 | 263 | 45 | 263 | 5.27e-17 | 80.1 |
| Msa0474670 | AT1G55690.3 | 31.905 | 210 | 123 | 9 | 71 | 261 | 104 | 312 | 7.09e-17 | 80.5 |
| Msa0474670 | AT1G55690.2 | 31.905 | 210 | 123 | 9 | 71 | 261 | 104 | 312 | 8.74e-17 | 80.5 |
| Msa0474670 | AT1G55690.4 | 31.905 | 210 | 123 | 9 | 71 | 261 | 104 | 312 | 8.74e-17 | 80.5 |
| Msa0474670 | AT1G55690.1 | 31.905 | 210 | 123 | 9 | 71 | 261 | 104 | 312 | 8.74e-17 | 80.5 |
| Msa0474670 | AT1G55690.5 | 31.905 | 210 | 123 | 9 | 71 | 261 | 104 | 312 | 8.74e-17 | 80.5 |
| Msa0474670 | AT1G22180.3 | 28.333 | 180 | 123 | 5 | 86 | 262 | 1 | 177 | 1.77e-16 | 77.4 |
| Msa0474670 | AT1G22180.1 | 28.333 | 180 | 123 | 5 | 86 | 262 | 1 | 177 | 1.77e-16 | 77.4 |
| Msa0474670 | AT1G72160.1 | 29.048 | 210 | 133 | 7 | 66 | 261 | 164 | 371 | 1.78e-16 | 79.3 |
| Msa0474670 | AT1G75170.3 | 33.117 | 154 | 91 | 5 | 116 | 262 | 10 | 158 | 3.60e-16 | 75.9 |
| Msa0474670 | AT3G24840.7 | 28.916 | 249 | 143 | 10 | 41 | 263 | 75 | 315 | 4.78e-16 | 78.2 |
| Msa0474670 | AT3G24840.3 | 28.916 | 249 | 143 | 10 | 41 | 263 | 75 | 315 | 4.78e-16 | 78.2 |
| Msa0474670 | AT3G24840.5 | 28.916 | 249 | 143 | 10 | 41 | 263 | 75 | 315 | 4.78e-16 | 78.2 |
| Msa0474670 | AT3G24840.1 | 28.916 | 249 | 143 | 10 | 41 | 263 | 75 | 315 | 5.20e-16 | 78.2 |
| Msa0474670 | AT3G24840.6 | 28.916 | 249 | 143 | 10 | 41 | 263 | 75 | 315 | 5.20e-16 | 78.2 |
| Msa0474670 | AT3G24840.4 | 28.916 | 249 | 143 | 10 | 41 | 263 | 75 | 315 | 5.20e-16 | 78.2 |
| Msa0474670 | AT3G24840.2 | 28.916 | 249 | 143 | 10 | 41 | 263 | 75 | 315 | 5.20e-16 | 78.2 |
| Msa0474670 | AT4G36640.2 | 27.174 | 184 | 127 | 5 | 86 | 265 | 1 | 181 | 6.65e-16 | 75.5 |
| Msa0474670 | AT3G22410.1 | 29.412 | 170 | 116 | 4 | 68 | 235 | 33 | 200 | 1.07e-15 | 76.6 |
| Msa0474670 | AT3G51670.1 | 27.273 | 209 | 137 | 5 | 66 | 261 | 82 | 288 | 1.48e-15 | 76.3 |
| Msa0474670 | AT2G18180.5 | 29.949 | 197 | 117 | 7 | 86 | 263 | 1 | 195 | 7.19e-14 | 71.6 |
| Msa0474670 | AT2G16380.3 | 31.443 | 194 | 114 | 7 | 86 | 261 | 1 | 193 | 2.54e-13 | 69.7 |
| Msa0474670 | AT1G55840.1 | 26.556 | 241 | 132 | 9 | 50 | 257 | 12 | 240 | 3.36e-12 | 65.9 |
| Msa0474670 | AT1G55840.2 | 27.143 | 210 | 120 | 7 | 71 | 257 | 14 | 213 | 6.42e-12 | 65.1 |
| Msa0474670 | AT5G47730.4 | 27.586 | 203 | 128 | 7 | 71 | 257 | 41 | 240 | 6.60e-12 | 65.1 |
| Msa0474670 | AT5G47730.1 | 27.586 | 203 | 128 | 7 | 71 | 257 | 41 | 240 | 6.60e-12 | 65.1 |
| Msa0474670 | AT1G72150.1 | 26.484 | 219 | 132 | 10 | 63 | 261 | 253 | 462 | 3.21e-11 | 63.5 |
Find 70 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGTCTCTCAATTCTTT+AGG | 0.153731 | 3_3:-77586512 | None:intergenic |
| TGTATCTATTGCAGACATTA+AGG | 0.206776 | 3_3:+77588506 | Msa0474670:CDS |
| AGTTCTCATGAGGCTGATTT+TGG | 0.214151 | 3_3:-77586692 | None:intergenic |
| GCAGCAAAAGCAACAGTTAT+AGG | 0.238428 | 3_3:-77587331 | None:intergenic |
| TAAAAGTGTTACCTTCTTCT+TGG | 0.260617 | 3_3:-77588688 | None:intergenic |
| AATTGTCTCTCAATTCTTTA+GGG | 0.261286 | 3_3:-77586511 | None:intergenic |
| CTTACATGTTTATGAAAGTA+TGG | 0.278705 | 3_3:+77588634 | Msa0474670:CDS |
| TTCTCCATTTCATGTACTTT+AGG | 0.284773 | 3_3:-77587210 | None:intergenic |
| GAATCTTGTATTGGAACTAA+TGG | 0.319714 | 3_3:-77588893 | None:intergenic |
| TTATTACAAGCAAATAAATA+AGG | 0.338806 | 3_3:+77588925 | Msa0474670:three_prime_UTR |
| ATTGGATTCAAAACATGAAT+TGG | 0.341875 | 3_3:+77586594 | Msa0474670:CDS |
| AAGCCGCGACCCTTCTTCTA+AGG | 0.343766 | 3_3:+77586723 | Msa0474670:CDS |
| GTAAGATTATAATAGCTAAT+TGG | 0.344337 | 3_3:+77589059 | Msa0474670:three_prime_UTR |
| AGTCAGCTCCCAGAGATATA+TGG | 0.360943 | 3_3:+77588860 | Msa0474670:CDS |
| AAAATTCTTGTTCAAGATGA+TGG | 0.385796 | 3_3:+77586637 | Msa0474670:CDS |
| AGATTACTATCCAGAGAGAT+TGG | 0.387553 | 3_3:+77588587 | Msa0474670:CDS |
| ATTAATCAAGAATCTTGTAT+TGG | 0.399694 | 3_3:-77588902 | None:intergenic |
| CATACTTTCATAAACATGTA+AGG | 0.403022 | 3_3:-77588633 | None:intergenic |
| TGTTCCTAAAGTACATGAAA+TGG | 0.412855 | 3_3:+77587206 | Msa0474670:CDS |
| GTATCTATTGCAGACATTAA+GGG | 0.415933 | 3_3:+77588507 | Msa0474670:CDS |
| AGTTTGCCTCCATATATCTC+TGG | 0.418208 | 3_3:-77588869 | None:intergenic |
| TCAAGATGATGGAGCTTTGA+AGG | 0.435484 | 3_3:+77586648 | Msa0474670:CDS |
| AATGCTGAATTCCCAGGCTC+AGG | 0.439463 | 3_3:-77586574 | None:intergenic |
| CAAGAAAAGATGTATGTTCA+AGG | 0.455113 | 3_3:+77587289 | Msa0474670:CDS |
| TATTGCAGACATTAAGGGCT+GGG | 0.457362 | 3_3:+77588512 | Msa0474670:CDS |
| ATATAATAATATCATGCATA+TGG | 0.458616 | 3_3:-77586473 | None:intergenic |
| TTGTTTGTTACCTTAGAAGA+AGG | 0.464246 | 3_3:-77586733 | None:intergenic |
| AACAACTTTCCCAATCTCTC+TGG | 0.465287 | 3_3:-77588597 | None:intergenic |
| ACATATTGTAGTTCTATACT+AGG | 0.481489 | 3_3:+77589037 | Msa0474670:three_prime_UTR |
| GAATCCAATGCTGAATTCCC+AGG | 0.487330 | 3_3:-77586580 | None:intergenic |
| TGGTATTGTCATCAATGAAA+GGG | 0.492868 | 3_3:-77588668 | None:intergenic |
| TTGGTATTGTCATCAATGAA+AGG | 0.500676 | 3_3:-77588669 | None:intergenic |
| GAAACCGTGAGCCCTGAGCC+TGG | 0.507130 | 3_3:+77586562 | Msa0474670:CDS |
| CTATTGCAGACATTAAGGGC+TGG | 0.521375 | 3_3:+77588511 | Msa0474670:CDS |
| GATTACTATCCAGAGAGATT+GGG | 0.526098 | 3_3:+77588588 | Msa0474670:CDS |
| TCGTGATTTAGATGTAGATA+AGG | 0.528241 | 3_3:+77587174 | Msa0474670:CDS |
| TGTTCAAGGAGTGGATAAGA+AGG | 0.530265 | 3_3:+77587303 | Msa0474670:CDS |
| TTCAAAACATGAATTGGCTA+AGG | 0.531998 | 3_3:+77586600 | Msa0474670:CDS |
| TGGATAGTAATCTTGTAGAA+TGG | 0.535897 | 3_3:-77588577 | None:intergenic |
| ACGCATGAATTGCTCAATCA+AGG | 0.540770 | 3_3:-77589087 | None:intergenic |
| ATGCTGAATTCCCAGGCTCA+GGG | 0.548569 | 3_3:-77586573 | None:intergenic |
| TAATGTGACAGGATGCCACC+AGG | 0.550381 | 3_3:+77588471 | Msa0474670:intron |
| TGTTTGTTACCTTAGAAGAA+GGG | 0.551270 | 3_3:-77586732 | None:intergenic |
| TGATGACAATACCAAGAAGA+AGG | 0.551378 | 3_3:+77588677 | Msa0474670:CDS |
| TATGCAAACAGCGACATTCG+CGG | 0.552322 | 3_3:+77588537 | Msa0474670:CDS |
| TGAGCCTGGGAATTCAGCAT+TGG | 0.553795 | 3_3:+77586576 | Msa0474670:CDS |
| AGATCGTCAGGTATCTCTGA+AGG | 0.558116 | 3_3:-77587262 | None:intergenic |
| ATTCCCAGGCTCAGGGCTCA+CGG | 0.559765 | 3_3:-77586566 | None:intergenic |
| AGCGACATTCGCGGTTACCT+CGG | 0.560343 | 3_3:+77588546 | Msa0474670:CDS |
| TTGTCTCTCAATTCTTTAGG+GGG | 0.564426 | 3_3:-77586509 | None:intergenic |
| TGGCTAAGGAAGAAACCAAA+GGG | 0.568357 | 3_3:+77586614 | Msa0474670:CDS |
| GTTTGCCTCCATATATCTCT+GGG | 0.573143 | 3_3:-77588868 | None:intergenic |
| AAACCGTGAGCCCTGAGCCT+GGG | 0.577698 | 3_3:+77586563 | Msa0474670:CDS |
| AGAAAATCATTTGTTCCAAG+TGG | 0.582982 | 3_3:+77587229 | Msa0474670:CDS |
| ATTGTCTCTCAATTCTTTAG+GGG | 0.598264 | 3_3:-77586510 | None:intergenic |
| AAAGATGTATGTTCAAGGAG+TGG | 0.599654 | 3_3:+77587294 | Msa0474670:CDS |
| TTACCTTAGAAGAAGGGTCG+CGG | 0.603865 | 3_3:-77586726 | None:intergenic |
| ATTGCAGACATTAAGGGCTG+GGG | 0.606164 | 3_3:+77588513 | Msa0474670:CDS |
| GATCGTCAGGTATCTCTGAA+GGG | 0.611116 | 3_3:-77587261 | None:intergenic |
| TCATAAACATGTAAGGTGCA+TGG | 0.614836 | 3_3:-77588626 | None:intergenic |
| ATCGTCAGGTATCTCTGAAG+GGG | 0.622595 | 3_3:-77587260 | None:intergenic |
| GAAGGGGATACAGAACCACT+TGG | 0.629494 | 3_3:-77587244 | None:intergenic |
| TTTCAACAAGAGTTCTCATG+AGG | 0.631501 | 3_3:-77586702 | None:intergenic |
| AATGTGACAGGATGCCACCA+GGG | 0.634560 | 3_3:+77588472 | Msa0474670:intron |
| TTGGCTAAGGAAGAAACCAA+AGG | 0.643668 | 3_3:+77586613 | Msa0474670:CDS |
| TTTATAGCAGACAAAGAACA+AGG | 0.650050 | 3_3:-77589130 | None:intergenic |
| GTTCAAGGAGTGGATAAGAA+GGG | 0.656937 | 3_3:+77587304 | Msa0474670:CDS |
| CAGCTCCCAGAGATATATGG+AGG | 0.670836 | 3_3:+77588863 | Msa0474670:CDS |
| ATGTGACAGGATGCCACCAG+GGG | 0.685775 | 3_3:+77588473 | Msa0474670:intron |
| GTAGAATGGTTAGAGCACCG+AGG | 0.822792 | 3_3:-77588563 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTATTTTTTTAATTCTAAA+AGG | + | chr3_3:77587855-77587874 | Msa0474670:intron | 10.0% |
| !! | ATATAATAATATCATGCATA+TGG | - | chr3_3:77586476-77586495 | None:intergenic | 15.0% |
| !!! | TTTTTTCGAACTAAATTTTT+TGG | + | chr3_3:77586995-77587014 | Msa0474670:intron | 15.0% |
| !! | TAAAGATACAAAATTTATGA+TGG | + | chr3_3:77587025-77587044 | Msa0474670:intron | 15.0% |
| !!! | AAACATTTTCAAAACAAAAA+TGG | + | chr3_3:77587355-77587374 | Msa0474670:CDS | 15.0% |
| !!! | TTCTTTATAAAATTTGCTTT+AGG | + | chr3_3:77587879-77587898 | Msa0474670:intron | 15.0% |
| !!! | AAATTTATCTTTTTTTACAC+AGG | - | chr3_3:77588083-77588102 | None:intergenic | 15.0% |
| !! | TTATTACAAGCAAATAAATA+AGG | + | chr3_3:77588925-77588944 | Msa0474670:three_prime_UTR | 15.0% |
| !!! | TCATTTTTTCAACAAGATAA+TGG | + | chr3_3:77586540-77586559 | Msa0474670:exon | 20.0% |
| !!! | TTTTGATAAAACAGTGATAA+CGG | + | chr3_3:77586797-77586816 | Msa0474670:intron | 20.0% |
| !!! | TGTTCAAGATTAGTTTATTT+TGG | + | chr3_3:77586874-77586893 | Msa0474670:intron | 20.0% |
| !!! | TTTCTAAAAAGTCAAACTTT+GGG | - | chr3_3:77586960-77586979 | None:intergenic | 20.0% |
| !!! | TTTTCTAAAAAGTCAAACTT+TGG | - | chr3_3:77586961-77586980 | None:intergenic | 20.0% |
| !! | ATAAAACAAAACAAACATCA+TGG | - | chr3_3:77587051-77587070 | None:intergenic | 20.0% |
| !!! | TTTTCAAAACAAAAATGGTT+TGG | + | chr3_3:77587360-77587379 | Msa0474670:CDS | 20.0% |
| !!! | AACTAAATTGACTTATTTTG+AGG | - | chr3_3:77587691-77587710 | None:intergenic | 20.0% |
| !! | CTTATGTCTAAATTAACAAA+AGG | - | chr3_3:77588232-77588251 | None:intergenic | 20.0% |
| !! | ATGCTTATACAGTTTATATT+TGG | + | chr3_3:77588401-77588420 | Msa0474670:intron | 20.0% |
| !! | ATTAATCAAGAATCTTGTAT+TGG | - | chr3_3:77588905-77588924 | None:intergenic | 20.0% |
| !! | GTAAGATTATAATAGCTAAT+TGG | + | chr3_3:77589059-77589078 | Msa0474670:three_prime_UTR | 20.0% |
| ! | AATTGTCTCTCAATTCTTTA+GGG | - | chr3_3:77586514-77586533 | None:intergenic | 25.0% |
| ! | ATTGGATTCAAAACATGAAT+TGG | + | chr3_3:77586594-77586613 | Msa0474670:CDS | 25.0% |
| ! | AAAATTCTTGTTCAAGATGA+TGG | + | chr3_3:77586637-77586656 | Msa0474670:CDS | 25.0% |
| !!! | GTTTTATTACAGTACTGATT+AGG | + | chr3_3:77587064-77587083 | Msa0474670:intron | 25.0% |
| !!! | ATTAGTTTGTTAACCATAAG+AGG | - | chr3_3:77587448-77587467 | None:intergenic | 25.0% |
| ! | CTAATATGTGAAGTTATGTT+TGG | + | chr3_3:77587463-77587482 | Msa0474670:intron | 25.0% |
| ! | TTCCATAAATTCTCCAAAAT+AGG | + | chr3_3:77587585-77587604 | Msa0474670:intron | 25.0% |
| ! | TCCATAAATTCTCCAAAATA+GGG | + | chr3_3:77587586-77587605 | Msa0474670:intron | 25.0% |
| !! | CAATATTTATCTAGCTTAGT+TGG | + | chr3_3:77587740-77587759 | Msa0474670:intron | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | - | chr3_3:77588020-77588039 | None:intergenic | 25.0% |
| !!! | ATTAATTTGTTTATCCCAAC+AGG | + | chr3_3:77588175-77588194 | Msa0474670:intron | 25.0% |
| !! | TATGTTGTTTATCCAAACAA+TGG | + | chr3_3:77588258-77588277 | Msa0474670:intron | 25.0% |
| !!! | TAGATATTTTTTGTGTATGC+AGG | + | chr3_3:77588289-77588308 | Msa0474670:intron | 25.0% |
| !!! | AGATATTTTTTGTGTATGCA+GGG | + | chr3_3:77588290-77588309 | Msa0474670:intron | 25.0% |
| ! | TGCATGAATTAATTAATGAG+AGG | - | chr3_3:77588363-77588382 | None:intergenic | 25.0% |
| ! | AACTTTACAATTCTTCTTAC+TGG | - | chr3_3:77588437-77588456 | None:intergenic | 25.0% |
| ! | CATACTTTCATAAACATGTA+AGG | - | chr3_3:77588636-77588655 | None:intergenic | 25.0% |
| ! | CTTACATGTTTATGAAAGTA+TGG | + | chr3_3:77588634-77588653 | Msa0474670:CDS | 25.0% |
| ! | TTTGAAAATTGAGATGTTCT+AGG | + | chr3_3:77588750-77588769 | Msa0474670:intron | 25.0% |
| !! | ACATATTGTAGTTCTATACT+AGG | + | chr3_3:77589037-77589056 | Msa0474670:three_prime_UTR | 25.0% |
| ATTGTCTCTCAATTCTTTAG+GGG | - | chr3_3:77586513-77586532 | None:intergenic | 30.0% | |
| CAATTGTCTCTCAATTCTTT+AGG | - | chr3_3:77586515-77586534 | None:intergenic | 30.0% | |
| TTCAAAACATGAATTGGCTA+AGG | + | chr3_3:77586600-77586619 | Msa0474670:CDS | 30.0% | |
| ! | TTGAACAAGAATTTTCCCTT+TGG | - | chr3_3:77586632-77586651 | None:intergenic | 30.0% |
| ! | TGTTTGTTACCTTAGAAGAA+GGG | - | chr3_3:77586735-77586754 | None:intergenic | 30.0% |
| ! | TTGTTTGTTACCTTAGAAGA+AGG | - | chr3_3:77586736-77586755 | None:intergenic | 30.0% |
| GTTGTAGTTGCAAAAAAAAG+TGG | - | chr3_3:77586833-77586852 | None:intergenic | 30.0% | |
| !! | ATTACTATGTTGTACCGATT+TGG | + | chr3_3:77586902-77586921 | Msa0474670:intron | 30.0% |
| AGTGAAAAACAGATCCAAAT+CGG | - | chr3_3:77586919-77586938 | None:intergenic | 30.0% | |
| TAGGTAGCAAATAGTTAGAT+TGG | + | chr3_3:77587089-77587108 | Msa0474670:intron | 30.0% | |
| TGGAATTGAATTGAACTTGA+TGG | + | chr3_3:77587109-77587128 | Msa0474670:intron | 30.0% | |
| GGAATTGAATTGAACTTGAT+GGG | + | chr3_3:77587110-77587129 | Msa0474670:intron | 30.0% | |
| TCGTGATTTAGATGTAGATA+AGG | + | chr3_3:77587174-77587193 | Msa0474670:CDS | 30.0% | |
| TGTTCCTAAAGTACATGAAA+TGG | + | chr3_3:77587206-77587225 | Msa0474670:CDS | 30.0% | |
| TTCTCCATTTCATGTACTTT+AGG | - | chr3_3:77587213-77587232 | None:intergenic | 30.0% | |
| AGAAAATCATTTGTTCCAAG+TGG | + | chr3_3:77587229-77587248 | Msa0474670:CDS | 30.0% | |
| CAAGAAAAGATGTATGTTCA+AGG | + | chr3_3:77587289-77587308 | Msa0474670:CDS | 30.0% | |
| !! | ACCCTATTTTGGAGAATTTA+TGG | - | chr3_3:77587590-77587609 | None:intergenic | 30.0% |
| ! | AGACCTCATATATATCCTTT+TGG | + | chr3_3:77587771-77587790 | Msa0474670:intron | 30.0% |
| AGACCAAAAGGATATATATG+AGG | - | chr3_3:77587777-77587796 | None:intergenic | 30.0% | |
| GATTTGAACTTAAGACCAAA+AGG | - | chr3_3:77587789-77587808 | None:intergenic | 30.0% | |
| !! | TTGGTCTTAAGTTCAAATCT+TGG | + | chr3_3:77587790-77587809 | Msa0474670:intron | 30.0% |
| AATAAGTCAATCCAAACACA+GGG | - | chr3_3:77587926-77587945 | None:intergenic | 30.0% | |
| AAATAAGTCAATCCAAACAC+AGG | - | chr3_3:77587927-77587946 | None:intergenic | 30.0% | |
| TAAACTCATGTGAGACTATT+TGG | + | chr3_3:77587964-77587983 | Msa0474670:intron | 30.0% | |
| AAACTCATGTGAGACTATTT+GGG | + | chr3_3:77587965-77587984 | Msa0474670:intron | 30.0% | |
| ! | GTTTTCATAAACTACCTGTT+GGG | - | chr3_3:77588192-77588211 | None:intergenic | 30.0% |
| ! | TGTTTTCATAAACTACCTGT+TGG | - | chr3_3:77588193-77588212 | None:intergenic | 30.0% |
| TGTATCTATTGCAGACATTA+AGG | + | chr3_3:77588506-77588525 | Msa0474670:CDS | 30.0% | |
| GTATCTATTGCAGACATTAA+GGG | + | chr3_3:77588507-77588526 | Msa0474670:CDS | 30.0% | |
| TGGATAGTAATCTTGTAGAA+TGG | - | chr3_3:77588580-77588599 | None:intergenic | 30.0% | |
| TGGTATTGTCATCAATGAAA+GGG | - | chr3_3:77588671-77588690 | None:intergenic | 30.0% | |
| TTGGTATTGTCATCAATGAA+AGG | - | chr3_3:77588672-77588691 | None:intergenic | 30.0% | |
| !! | TAAAAGTGTTACCTTCTTCT+TGG | - | chr3_3:77588691-77588710 | None:intergenic | 30.0% |
| GAATCTTGTATTGGAACTAA+TGG | - | chr3_3:77588896-77588915 | None:intergenic | 30.0% | |
| TTTATAGCAGACAAAGAACA+AGG | - | chr3_3:77589133-77589152 | None:intergenic | 30.0% | |
| TTGTCTCTCAATTCTTTAGG+GGG | - | chr3_3:77586512-77586531 | None:intergenic | 35.0% | |
| TTTCAACAAGAGTTCTCATG+AGG | - | chr3_3:77586705-77586724 | None:intergenic | 35.0% | |
| ! | CTAATCTTGAACAAAGTGCT+AGG | - | chr3_3:77586867-77586886 | None:intergenic | 35.0% |
| !! | TTACAGTACTGATTAGGCTT+AGG | + | chr3_3:77587070-77587089 | Msa0474670:intron | 35.0% |
| AAAGATGTATGTTCAAGGAG+TGG | + | chr3_3:77587294-77587313 | Msa0474670:CDS | 35.0% | |
| CAACTAATAGCATCTCAAGT+GGG | - | chr3_3:77587410-77587429 | None:intergenic | 35.0% | |
| ACAACTAATAGCATCTCAAG+TGG | - | chr3_3:77587411-77587430 | None:intergenic | 35.0% | |
| CAATGCTTGAAATCCTCTTA+TGG | + | chr3_3:77587432-77587451 | Msa0474670:intron | 35.0% | |
| AGGTTTAAACTTCGGGATTT+AGG | + | chr3_3:77587652-77587671 | Msa0474670:intron | 35.0% | |
| GGTTTAAACTTCGGGATTTA+GGG | + | chr3_3:77587653-77587672 | Msa0474670:intron | 35.0% | |
| AGACTATTTGGGAGAGTTTA+AGG | + | chr3_3:77587976-77587995 | Msa0474670:intron | 35.0% | |
| TCTATCATTGAGCCATTGTT+TGG | - | chr3_3:77588273-77588292 | None:intergenic | 35.0% | |
| AGATTACTATCCAGAGAGAT+TGG | + | chr3_3:77588587-77588606 | Msa0474670:CDS | 35.0% | |
| GATTACTATCCAGAGAGATT+GGG | + | chr3_3:77588588-77588607 | Msa0474670:CDS | 35.0% | |
| TCATAAACATGTAAGGTGCA+TGG | - | chr3_3:77588629-77588648 | None:intergenic | 35.0% | |
| TGATGACAATACCAAGAAGA+AGG | + | chr3_3:77588677-77588696 | Msa0474670:CDS | 35.0% | |
| TTGGCTAAGGAAGAAACCAA+AGG | + | chr3_3:77586613-77586632 | Msa0474670:CDS | 40.0% | |
| TGGCTAAGGAAGAAACCAAA+GGG | + | chr3_3:77586614-77586633 | Msa0474670:CDS | 40.0% | |
| !! | TCAAGATGATGGAGCTTTGA+AGG | + | chr3_3:77586648-77586667 | Msa0474670:CDS | 40.0% |
| !! | AGTTCTCATGAGGCTGATTT+TGG | - | chr3_3:77586695-77586714 | None:intergenic | 40.0% |
| ! | TTGAATTGAACTTGATGGGC+AGG | + | chr3_3:77587114-77587133 | Msa0474670:intron | 40.0% |
| ! | TTTTCTTGTGCAAGATCGTC+AGG | - | chr3_3:77587277-77587296 | None:intergenic | 40.0% |
| TGTTCAAGGAGTGGATAAGA+AGG | + | chr3_3:77587303-77587322 | Msa0474670:CDS | 40.0% | |
| GTTCAAGGAGTGGATAAGAA+GGG | + | chr3_3:77587304-77587323 | Msa0474670:CDS | 40.0% | |
| GCAGCAAAAGCAACAGTTAT+AGG | - | chr3_3:77587334-77587353 | None:intergenic | 40.0% | |
| GTAGTTGTGTGAGATCGTTT+AGG | + | chr3_3:77587510-77587529 | Msa0474670:intron | 40.0% | |
| TCTCCAAAATAGGGTCTGTT+TGG | + | chr3_3:77587595-77587614 | Msa0474670:intron | 40.0% | |
| ! | TGTCCAAACAGACCCTATTT+TGG | - | chr3_3:77587601-77587620 | None:intergenic | 40.0% |
| AAAATAGGGTCTGTTTGGAC+AGG | + | chr3_3:77587600-77587619 | Msa0474670:intron | 40.0% | |
| AAATAGGGTCTGTTTGGACA+GGG | + | chr3_3:77587601-77587620 | Msa0474670:intron | 40.0% | |
| AAGTTTAAACCTTGCTTGGG+TGG | - | chr3_3:77587644-77587663 | None:intergenic | 40.0% | |
| CCGAAGTTTAAACCTTGCTT+GGG | - | chr3_3:77587647-77587666 | None:intergenic | 40.0% | |
| CCCAAGCAAGGTTTAAACTT+CGG | + | chr3_3:77587644-77587663 | Msa0474670:intron | 40.0% | |
| CCAAGCAAGGTTTAAACTTC+GGG | + | chr3_3:77587645-77587664 | Msa0474670:intron | 40.0% | |
| TTTAGGCATCTTGACGTGTT+GGG | + | chr3_3:77587896-77587915 | Msa0474670:intron | 40.0% | |
| AGCTTACCCAATAATGTGAC+AGG | + | chr3_3:77588460-77588479 | Msa0474670:intron | 40.0% | |
| TGGCATCCTGTCACATTATT+GGG | - | chr3_3:77588469-77588488 | None:intergenic | 40.0% | |
| ! | GATACAAACTTTTCTTCCCC+TGG | - | chr3_3:77588492-77588511 | None:intergenic | 40.0% |
| TATTGCAGACATTAAGGGCT+GGG | + | chr3_3:77588512-77588531 | Msa0474670:CDS | 40.0% | |
| AACAACTTTCCCAATCTCTC+TGG | - | chr3_3:77588600-77588619 | None:intergenic | 40.0% | |
| GTTTGCCTCCATATATCTCT+GGG | - | chr3_3:77588871-77588890 | None:intergenic | 40.0% | |
| AGTTTGCCTCCATATATCTC+TGG | - | chr3_3:77588872-77588891 | None:intergenic | 40.0% | |
| ACGCATGAATTGCTCAATCA+AGG | - | chr3_3:77589090-77589109 | None:intergenic | 40.0% | |
| GACAAAGAACAAGGCTAAAG+TGG | - | chr3_3:77589124-77589143 | None:intergenic | 40.0% | |
| GAATCCAATGCTGAATTCCC+AGG | - | chr3_3:77586583-77586602 | None:intergenic | 45.0% | |
| TTACCTTAGAAGAAGGGTCG+CGG | - | chr3_3:77586729-77586748 | None:intergenic | 45.0% | |
| ! | AATTGAACTTGATGGGCAGG+AGG | + | chr3_3:77587117-77587136 | Msa0474670:intron | 45.0% |
| ! | ATCGTCAGGTATCTCTGAAG+GGG | - | chr3_3:77587263-77587282 | None:intergenic | 45.0% |
| GATCGTCAGGTATCTCTGAA+GGG | - | chr3_3:77587264-77587283 | None:intergenic | 45.0% | |
| AGATCGTCAGGTATCTCTGA+AGG | - | chr3_3:77587265-77587284 | None:intergenic | 45.0% | |
| CCCGAAGTTTAAACCTTGCT+TGG | - | chr3_3:77587648-77587667 | None:intergenic | 45.0% | |
| CTTTAGGCATCTTGACGTGT+TGG | + | chr3_3:77587895-77587914 | Msa0474670:intron | 45.0% | |
| AGTCAATCCAAACACAGGGT+CGG | - | chr3_3:77587922-77587941 | None:intergenic | 45.0% | |
| GTGGCATCCTGTCACATTAT+TGG | - | chr3_3:77588470-77588489 | None:intergenic | 45.0% | |
| ! | ACAAACTTTTCTTCCCCTGG+TGG | - | chr3_3:77588489-77588508 | None:intergenic | 45.0% |
| CTATTGCAGACATTAAGGGC+TGG | + | chr3_3:77588511-77588530 | Msa0474670:CDS | 45.0% | |
| ATTGCAGACATTAAGGGCTG+GGG | + | chr3_3:77588513-77588532 | Msa0474670:CDS | 45.0% | |
| TATGCAAACAGCGACATTCG+CGG | + | chr3_3:77588537-77588556 | Msa0474670:CDS | 45.0% | |
| AGTCAGCTCCCAGAGATATA+TGG | + | chr3_3:77588860-77588879 | Msa0474670:CDS | 45.0% | |
| ATGCTGAATTCCCAGGCTCA+GGG | - | chr3_3:77586576-77586595 | None:intergenic | 50.0% | |
| AATGCTGAATTCCCAGGCTC+AGG | - | chr3_3:77586577-77586596 | None:intergenic | 50.0% | |
| TGAGCCTGGGAATTCAGCAT+TGG | + | chr3_3:77586576-77586595 | Msa0474670:CDS | 50.0% | |
| GAAGGGGATACAGAACCACT+TGG | - | chr3_3:77587247-77587266 | None:intergenic | 50.0% | |
| TAAACCTTGCTTGGGTGGCT+TGG | - | chr3_3:77587639-77587658 | None:intergenic | 50.0% | |
| TAATGTGACAGGATGCCACC+AGG | + | chr3_3:77588471-77588490 | Msa0474670:intron | 50.0% | |
| AATGTGACAGGATGCCACCA+GGG | + | chr3_3:77588472-77588491 | Msa0474670:intron | 50.0% | |
| !! | GTAGAATGGTTAGAGCACCG+AGG | - | chr3_3:77588566-77588585 | None:intergenic | 50.0% |
| CAGCTCCCAGAGATATATGG+AGG | + | chr3_3:77588863-77588882 | Msa0474670:CDS | 50.0% | |
| AAGCCGCGACCCTTCTTCTA+AGG | + | chr3_3:77586723-77586742 | Msa0474670:CDS | 55.0% | |
| ATGTGACAGGATGCCACCAG+GGG | + | chr3_3:77588473-77588492 | Msa0474670:intron | 55.0% | |
| AGCGACATTCGCGGTTACCT+CGG | + | chr3_3:77588546-77588565 | Msa0474670:CDS | 55.0% | |
| AAACCGTGAGCCCTGAGCCT+GGG | + | chr3_3:77586563-77586582 | Msa0474670:CDS | 60.0% | |
| ATTCCCAGGCTCAGGGCTCA+CGG | - | chr3_3:77586569-77586588 | None:intergenic | 60.0% | |
| AGGGTCTGTTTGGACAGGGC+CGG | + | chr3_3:77587605-77587624 | Msa0474670:intron | 60.0% | |
| TGTTGGGCCGACCCTGTGTT+TGG | + | chr3_3:77587912-77587931 | Msa0474670:intron | 60.0% | |
| GAAACCGTGAGCCCTGAGCC+TGG | + | chr3_3:77586562-77586581 | Msa0474670:CDS | 65.0% | |
| TTTGGACAGGGCCGGCCCAA+GGG | + | chr3_3:77587613-77587632 | Msa0474670:intron | 65.0% | |
| ! | GCTTGGGTGGCTTGGCCCTT+GGG | - | chr3_3:77587631-77587650 | None:intergenic | 65.0% |
| ! | TGCTTGGGTGGCTTGGCCCT+TGG | - | chr3_3:77587632-77587651 | None:intergenic | 65.0% |
| AGGGCCAAGCCACCCAAGCA+AGG | + | chr3_3:77587632-77587651 | Msa0474670:intron | 65.0% | |
| GTTTGGACAGGGCCGGCCCA+AGG | + | chr3_3:77587612-77587631 | Msa0474670:intron | 70.0% | |
| ! | GGGTGGCTTGGCCCTTGGGC+CGG | - | chr3_3:77587627-77587646 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 77586461 | 77589205 | 77586461 | ID=Msa0474670;Name=Msa0474670 |
| chr3_3 | mRNA | 77586461 | 77589205 | 77586461 | ID=Msa0474670-mRNA-1;Parent=Msa0474670;Name=Msa0474670-mRNA-1;_AED=0.27;_eAED=0.27;_QI=98|1|1|1|0.8|0.66|6|264|271 |
| chr3_3 | exon | 77586461 | 77586744 | 77586461 | ID=Msa0474670-mRNA-1:exon:20783;Parent=Msa0474670-mRNA-1 |
| chr3_3 | exon | 77587136 | 77587394 | 77587136 | ID=Msa0474670-mRNA-1:exon:20784;Parent=Msa0474670-mRNA-1 |
| chr3_3 | exon | 77588311 | 77588347 | 77588311 | ID=Msa0474670-mRNA-1:exon:20785;Parent=Msa0474670-mRNA-1 |
| chr3_3 | exon | 77588482 | 77588698 | 77588482 | ID=Msa0474670-mRNA-1:exon:20786;Parent=Msa0474670-mRNA-1 |
| chr3_3 | exon | 77588803 | 77589107 | 77588803 | ID=Msa0474670-mRNA-1:exon:20787;Parent=Msa0474670-mRNA-1 |
| chr3_3 | exon | 77589130 | 77589205 | 77589130 | ID=Msa0474670-mRNA-1:exon:20788;Parent=Msa0474670-mRNA-1 |
| chr3_3 | five_prime_UTR | 77586461 | 77586558 | 77586461 | ID=Msa0474670-mRNA-1:five_prime_utr;Parent=Msa0474670-mRNA-1 |
| chr3_3 | CDS | 77586559 | 77586744 | 77586559 | ID=Msa0474670-mRNA-1:cds;Parent=Msa0474670-mRNA-1 |
| chr3_3 | CDS | 77587136 | 77587394 | 77587136 | ID=Msa0474670-mRNA-1:cds;Parent=Msa0474670-mRNA-1 |
| chr3_3 | CDS | 77588311 | 77588347 | 77588311 | ID=Msa0474670-mRNA-1:cds;Parent=Msa0474670-mRNA-1 |
| chr3_3 | CDS | 77588482 | 77588698 | 77588482 | ID=Msa0474670-mRNA-1:cds;Parent=Msa0474670-mRNA-1 |
| chr3_3 | CDS | 77588803 | 77588919 | 77588803 | ID=Msa0474670-mRNA-1:cds;Parent=Msa0474670-mRNA-1 |
| chr3_3 | three_prime_UTR | 77588920 | 77589107 | 77588920 | ID=Msa0474670-mRNA-1:three_prime_utr;Parent=Msa0474670-mRNA-1 |
| chr3_3 | three_prime_UTR | 77589130 | 77589205 | 77589130 | ID=Msa0474670-mRNA-1:three_prime_utr;Parent=Msa0474670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
