Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134390 | KEH43766.1 | 89.560 | 182 | 15 | 1 | 20 | 201 | 21 | 198 | 6.96e-105 | 310 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134390 | sp|P11432|ELI_PEA | 79.602 | 201 | 36 | 1 | 1 | 201 | 1 | 196 | 6.08e-105 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134390 | A0A396JXB1 | 89.560 | 182 | 15 | 1 | 20 | 201 | 21 | 198 | 3.32e-105 | 310 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014970 | Msa0134390 | 0.825754 | 3.944413e-54 | -8.615850e-47 |
| Msa0016830 | Msa0134390 | 0.803531 | 3.333904e-49 | -8.615850e-47 |
| Msa0021710 | Msa0134390 | 0.845949 | 2.952003e-59 | -8.615850e-47 |
| Msa0024240 | Msa0134390 | 0.805114 | 1.560305e-49 | -8.615850e-47 |
| Msa0027030 | Msa0134390 | 0.809520 | 1.816984e-50 | -8.615850e-47 |
| Msa0032450 | Msa0134390 | 0.830708 | 2.522686e-55 | -8.615850e-47 |
| Msa0039920 | Msa0134390 | 0.906593 | 1.256726e-80 | -8.615850e-47 |
| Msa0040090 | Msa0134390 | 0.929989 | 3.144180e-93 | -8.615850e-47 |
| Msa0041780 | Msa0134390 | 0.816010 | 6.892477e-52 | -8.615850e-47 |
| Msa0053210 | Msa0134390 | 0.804797 | 1.818008e-49 | -8.615850e-47 |
| Msa0057740 | Msa0134390 | 0.811442 | 6.987516e-51 | -8.615850e-47 |
| Msa0066990 | Msa0134390 | 0.801087 | 1.062296e-48 | -8.615850e-47 |
| Msa0080620 | Msa0134390 | 0.844535 | 7.118584e-59 | -8.615850e-47 |
| Msa0086620 | Msa0134390 | 0.822302 | 2.547316e-53 | -8.615850e-47 |
| Msa0087130 | Msa0134390 | 0.824315 | 8.626523e-54 | -8.615850e-47 |
| Msa0087580 | Msa0134390 | 0.918103 | 2.354708e-86 | -8.615850e-47 |
| Msa0087780 | Msa0134390 | 0.953270 | 3.964056e-111 | -8.615850e-47 |
| Msa0087790 | Msa0134390 | 0.928858 | 1.591310e-92 | -8.615850e-47 |
| Msa0096020 | Msa0134390 | 0.805151 | 1.532770e-49 | -8.615850e-47 |
| Msa0096570 | Msa0134390 | 0.808550 | 2.930527e-50 | -8.615850e-47 |
| Msa0098800 | Msa0134390 | 0.814846 | 1.251315e-51 | -8.615850e-47 |
| Msa0103060 | Msa0134390 | 0.801027 | 1.092989e-48 | -8.615850e-47 |
| Msa0108500 | Msa0134390 | 0.820564 | 6.416791e-53 | -8.615850e-47 |
| Msa0116950 | Msa0134390 | 0.806711 | 7.203331e-50 | -8.615850e-47 |
| Msa0117300 | Msa0134390 | 0.802864 | 4.582818e-49 | -8.615850e-47 |
| Msa0133450 | Msa0134390 | 0.875615 | 2.679809e-68 | -8.615850e-47 |
| Msa0134300 | Msa0134390 | 0.919080 | 7.030834e-87 | -8.615850e-47 |
| Msa0134380 | Msa0134390 | 0.932310 | 1.031961e-94 | -8.615850e-47 |
| Msa0134390 | Msa0134400 | 0.938563 | 5.474333e-99 | -8.615850e-47 |
| Msa0134390 | Msa0134410 | 0.874133 | 8.565243e-68 | -8.615850e-47 |
| Msa0134390 | Msa0134420 | 0.926234 | 6.204757e-91 | -8.615850e-47 |
| Msa0134390 | Msa0136180 | 0.806197 | 9.247041e-50 | -8.615850e-47 |
| Msa0134390 | Msa0137010 | 0.854127 | 1.513439e-61 | -8.615850e-47 |
| Msa0134390 | Msa0160470 | 0.824042 | 1.000224e-53 | -8.615850e-47 |
| Msa0134390 | Msa0168470 | 0.810166 | 1.319319e-50 | -8.615850e-47 |
| Msa0134390 | Msa0175720 | 0.808637 | 2.808351e-50 | -8.615850e-47 |
| Msa0134390 | Msa0180590 | 0.923128 | 3.992386e-89 | -8.615850e-47 |
| Msa0134390 | Msa0180600 | 0.927644 | 8.819982e-92 | -8.615850e-47 |
| Msa0134390 | Msa0180780 | 0.929381 | 7.540263e-93 | -8.615850e-47 |
| Msa0134390 | Msa0184850 | 0.805534 | 1.274153e-49 | -8.615850e-47 |
| Msa0134390 | Msa0186510 | 0.884484 | 1.843661e-71 | -8.615850e-47 |
| Msa0134390 | Msa0194420 | 0.808093 | 3.667835e-50 | -8.615850e-47 |
| Msa0134390 | Msa0208710 | 0.808473 | 3.044633e-50 | -8.615850e-47 |
| Msa0134390 | Msa0213590 | 0.808830 | 2.554287e-50 | -8.615850e-47 |
| Msa0134390 | Msa0229750 | 0.856135 | 3.948363e-62 | -8.615850e-47 |
| Msa0134390 | Msa0230980 | 0.840539 | 8.180543e-58 | -8.615850e-47 |
| Msa0134390 | Msa0238960 | 0.868856 | 4.782122e-66 | -8.615850e-47 |
| Msa0134390 | Msa0243160 | 0.822920 | 1.829518e-53 | -8.615850e-47 |
| Msa0134390 | Msa0270460 | 0.843596 | 1.271251e-58 | -8.615850e-47 |
| Msa0134390 | Msa0276800 | 0.827205 | 1.778796e-54 | -8.615850e-47 |
| Msa0134390 | Msa0293000 | 0.809356 | 1.969939e-50 | -8.615850e-47 |
| Msa0134390 | Msa0293060 | 0.816808 | 4.568499e-52 | -8.615850e-47 |
| Msa0134390 | Msa0309060 | 0.836877 | 7.232136e-57 | -8.615850e-47 |
| Msa0134390 | Msa0316720 | 0.836977 | 6.819885e-57 | -8.615850e-47 |
| Msa0134390 | Msa0335860 | 0.819292 | 1.253654e-52 | -8.615850e-47 |
| Msa0134390 | Msa0337300 | 0.821764 | 3.395049e-53 | -8.615850e-47 |
| Msa0134390 | Msa0358720 | 0.802276 | 6.058077e-49 | -8.615850e-47 |
| Msa0134390 | Msa0371350 | 0.825404 | 4.775691e-54 | -8.615850e-47 |
| Msa0134390 | Msa0372550 | 0.802052 | 6.737378e-49 | -8.615850e-47 |
| Msa0134390 | Msa0372990 | 0.829282 | 5.616294e-55 | -8.615850e-47 |
| Msa0134390 | Msa0375930 | 0.801073 | 1.069437e-48 | -8.615850e-47 |
| Msa0134390 | Msa0377460 | 0.802030 | 6.807568e-49 | -8.615850e-47 |
| Msa0134390 | Msa0378670 | 0.839421 | 1.600817e-57 | -8.615850e-47 |
| Msa0134390 | Msa0378700 | 0.841290 | 5.197879e-58 | -8.615850e-47 |
| Msa0134390 | Msa0385770 | 0.874227 | 7.961913e-68 | -8.615850e-47 |
| Msa0134390 | Msa0387740 | 0.847897 | 8.644628e-60 | -8.615850e-47 |
| Msa0134390 | Msa0391160 | 0.821162 | 4.675928e-53 | -8.615850e-47 |
| Msa0134390 | Msa0403720 | 0.838083 | 3.549095e-57 | -8.615850e-47 |
| Msa0134390 | Msa0404880 | 0.831322 | 1.782774e-55 | -8.615850e-47 |
| Msa0134390 | Msa0419040 | 0.812304 | 4.534249e-51 | -8.615850e-47 |
| Msa0134390 | Msa0419420 | 0.821895 | 3.166428e-53 | -8.615850e-47 |
| Msa0134390 | Msa0424220 | 0.807921 | 3.990416e-50 | -8.615850e-47 |
| Msa0134390 | Msa0424570 | 0.800945 | 1.136016e-48 | -8.615850e-47 |
| Msa0134390 | Msa0426860 | 0.818462 | 1.935450e-52 | -8.615850e-47 |
| Msa0134390 | Msa0426890 | 0.812627 | 3.854515e-51 | -8.615850e-47 |
| Msa0134390 | Msa0428330 | 0.851233 | 1.013878e-60 | -8.615850e-47 |
| Msa0134390 | Msa0430040 | 0.830600 | 2.681155e-55 | -8.615850e-47 |
| Msa0134390 | Msa0431940 | 0.842779 | 2.099006e-58 | -8.615850e-47 |
| Msa0134390 | Msa0433270 | 0.808901 | 2.465866e-50 | -8.615850e-47 |
| Msa0134390 | Msa0434090 | -0.827382 | 1.613942e-54 | -8.615850e-47 |
| Msa0134390 | Msa0436610 | 0.806022 | 1.006687e-49 | -8.615850e-47 |
| Msa0134390 | Msa0438680 | 0.819518 | 1.113883e-52 | -8.615850e-47 |
| Msa0134390 | Msa0450890 | 0.803026 | 4.243078e-49 | -8.615850e-47 |
| Msa0134390 | Msa0456480 | 0.828162 | 1.047969e-54 | -8.615850e-47 |
| Msa0134390 | Msa0460220 | 0.800486 | 1.408800e-48 | -8.615850e-47 |
| Msa0134390 | Msa0469770 | 0.807100 | 5.960517e-50 | -8.615850e-47 |
| Msa0134390 | Msa0469840 | 0.821005 | 5.081481e-53 | -8.615850e-47 |
| Msa0134390 | Msa0473320 | 0.808530 | 2.960720e-50 | -8.615850e-47 |
| Msa0134390 | Msa0474670 | 0.802668 | 5.029937e-49 | -8.615850e-47 |
| Msa0134390 | Msa0477900 | -0.829619 | 4.651679e-55 | -8.615850e-47 |
| Msa0134390 | Msa0481050 | 0.823316 | 1.478886e-53 | -8.615850e-47 |
| Msa0134390 | Msa0483090 | 0.811499 | 6.789415e-51 | -8.615850e-47 |
| Msa0134390 | Msa0484590 | 0.804929 | 1.705805e-49 | -8.615850e-47 |
| Msa0134390 | Msa0490740 | 0.817715 | 2.856198e-52 | -8.615850e-47 |
| Msa0134390 | Msa0500490 | 0.827414 | 1.584931e-54 | -8.615850e-47 |
| Msa0134390 | Msa0501350 | 0.802790 | 4.746137e-49 | -8.615850e-47 |
| Msa0134390 | Msa0510550 | 0.808964 | 2.390844e-50 | -8.615850e-47 |
| Msa0134390 | Msa0511600 | 0.862958 | 3.504341e-64 | -8.615850e-47 |
| Msa0134390 | Msa0515420 | 0.809882 | 1.519285e-50 | -8.615850e-47 |
| Msa0134390 | Msa0516000 | 0.805631 | 1.216001e-49 | -8.615850e-47 |
| Msa0134390 | Msa0520810 | 0.817624 | 2.994395e-52 | -8.615850e-47 |
| Msa0134390 | Msa0521940 | -0.821570 | 3.764236e-53 | -8.615850e-47 |
| Msa0134390 | Msa0524080 | 0.807462 | 4.995154e-50 | -8.615850e-47 |
| Msa0134390 | Msa0525180 | 0.825352 | 4.912829e-54 | -8.615850e-47 |
| Msa0134390 | Msa0530220 | 0.805168 | 1.520392e-49 | -8.615850e-47 |
| Msa0134390 | Msa0530250 | 0.802194 | 6.299131e-49 | -8.615850e-47 |
| Msa0134390 | Msa0548260 | 0.803552 | 3.301534e-49 | -8.615850e-47 |
| Msa0134390 | Msa0549330 | 0.805745 | 1.151043e-49 | -8.615850e-47 |
| Msa0134390 | Msa0552660 | 0.809218 | 2.109569e-50 | -8.615850e-47 |
| Msa0134390 | Msa0556450 | 0.815707 | 8.055623e-52 | -8.615850e-47 |
| Msa0134390 | Msa0565320 | 0.807423 | 5.092724e-50 | -8.615850e-47 |
| Msa0134390 | Msa0565470 | 0.811041 | 8.535436e-51 | -8.615850e-47 |
| Msa0134390 | Msa0566090 | 0.809277 | 2.048310e-50 | -8.615850e-47 |
| Msa0134390 | Msa0568460 | 0.813490 | 2.493497e-51 | -8.615850e-47 |
| Msa0134390 | Msa0580540 | 0.840734 | 7.272819e-58 | -8.615850e-47 |
| Msa0134390 | Msa0598470 | 0.831383 | 1.721622e-55 | -8.615850e-47 |
| Msa0134390 | Msa0603180 | 0.801201 | 1.006643e-48 | -8.615850e-47 |
| Msa0134390 | Msa0604640 | 0.834222 | 3.395543e-56 | -8.615850e-47 |
| Msa0134390 | Msa0606680 | 0.814038 | 1.888558e-51 | -8.615850e-47 |
| Msa0134390 | Msa0608940 | 0.839076 | 1.967113e-57 | -8.615850e-47 |
| Msa0134390 | Msa0615850 | 0.812805 | 3.523386e-51 | -8.615850e-47 |
| Msa0134390 | Msa0617120 | 0.806717 | 7.182352e-50 | -8.615850e-47 |
| Msa0134390 | Msa0621780 | 0.856997 | 2.203541e-62 | -8.615850e-47 |
| Msa0134390 | Msa0630850 | 0.836141 | 1.113478e-56 | -8.615850e-47 |
| Msa0134390 | Msa0644220 | 0.800512 | 1.392003e-48 | -8.615850e-47 |
| Msa0134390 | Msa0651990 | 0.816455 | 5.483125e-52 | -8.615850e-47 |
| Msa0134390 | Msa0667680 | 0.808330 | 3.265850e-50 | -8.615850e-47 |
| Msa0134390 | Msa0677250 | 0.825858 | 3.726752e-54 | -8.615850e-47 |
| Msa0134390 | Msa0691740 | 0.802159 | 6.402574e-49 | -8.615850e-47 |
| Msa0134390 | Msa0694510 | 0.819809 | 9.557508e-53 | -8.615850e-47 |
| Msa0134390 | Msa0698900 | 0.818367 | 2.034164e-52 | -8.615850e-47 |
| Msa0134390 | Msa0701460 | 0.831333 | 1.772016e-55 | -8.615850e-47 |
| Msa0134390 | Msa0701530 | 0.835852 | 1.318580e-56 | -8.615850e-47 |
| Msa0134390 | Msa0702560 | 0.800356 | 1.497787e-48 | -8.615850e-47 |
| Msa0134390 | Msa0704780 | 0.845644 | 3.571158e-59 | -8.615850e-47 |
| Msa0134390 | Msa0705050 | 0.812305 | 4.532902e-51 | -8.615850e-47 |
| Msa0134390 | Msa0705130 | 0.833515 | 5.102296e-56 | -8.615850e-47 |
| Msa0134390 | Msa0705810 | 0.811590 | 6.489151e-51 | -8.615850e-47 |
| Msa0134390 | Msa0712670 | 0.861805 | 7.923596e-64 | -8.615850e-47 |
| Msa0134390 | Msa0714060 | 0.835682 | 1.456012e-56 | -8.615850e-47 |
| Msa0134390 | Msa0714200 | 0.843864 | 1.078058e-58 | -8.615850e-47 |
| Msa0134390 | Msa0729590 | 0.819992 | 8.678240e-53 | -8.615850e-47 |
| Msa0134390 | Msa0730250 | 0.811891 | 5.580690e-51 | -8.615850e-47 |
| Msa0134390 | Msa0741710 | 0.807009 | 6.231876e-50 | -8.615850e-47 |
| Msa0134390 | Msa0745010 | 0.801351 | 9.382382e-49 | -8.615850e-47 |
| Msa0134390 | Msa0747900 | 0.806441 | 8.212469e-50 | -8.615850e-47 |
| Msa0134390 | Msa0748980 | 0.809814 | 1.571333e-50 | -8.615850e-47 |
| Msa0134390 | Msa0752830 | 0.861027 | 1.369157e-63 | -8.615850e-47 |
| Msa0134390 | Msa0754350 | 0.812079 | 5.078096e-51 | -8.615850e-47 |
| Msa0134390 | Msa0754790 | 0.813201 | 2.886079e-51 | -8.615850e-47 |
| Msa0134390 | Msa0754840 | 0.830604 | 2.675166e-55 | -8.615850e-47 |
| Msa0134390 | Msa0756440 | 0.856621 | 2.843381e-62 | -8.615850e-47 |
| Msa0134390 | Msa0768240 | 0.824343 | 8.499915e-54 | -8.615850e-47 |
| Msa0134390 | Msa0770540 | 0.822767 | 1.986271e-53 | -8.615850e-47 |
| Msa0134390 | Msa0776590 | 0.874944 | 4.545348e-68 | -8.615850e-47 |
| Msa0134390 | Msa0790650 | 0.825549 | 4.413154e-54 | -8.615850e-47 |
| Msa0134390 | Msa0795710 | 0.856137 | 3.941750e-62 | -8.615850e-47 |
| Msa0134390 | Msa0796610 | 0.806699 | 7.245421e-50 | -8.615850e-47 |
| Msa0134390 | Msa0808500 | 0.803426 | 3.506274e-49 | -8.615850e-47 |
| Msa0134390 | Msa0813630 | 0.819265 | 1.271823e-52 | -8.615850e-47 |
| Msa0134390 | Msa0822800 | 0.817837 | 2.679958e-52 | -8.615850e-47 |
| Msa0134390 | Msa0825520 | 0.818225 | 2.189932e-52 | -8.615850e-47 |
| Msa0134390 | Msa0825960 | 0.804292 | 2.317020e-49 | -8.615850e-47 |
| Msa0134390 | Msa0833450 | 0.847884 | 8.718587e-60 | -8.615850e-47 |
| Msa0134390 | Msa0833910 | 0.823415 | 1.402082e-53 | -8.615850e-47 |
| Msa0134390 | Msa0834160 | 0.813366 | 2.654346e-51 | -8.615850e-47 |
| Msa0134390 | Msa0835550 | 0.844629 | 6.717693e-59 | -8.615850e-47 |
| Msa0134390 | Msa0854190 | 0.807066 | 6.060857e-50 | -8.615850e-47 |
| Msa0134390 | Msa0855050 | 0.800472 | 1.418667e-48 | -8.615850e-47 |
| Msa0134390 | Msa0864730 | 0.821236 | 4.495999e-53 | -8.615850e-47 |
| Msa0134390 | Msa0864750 | 0.818337 | 2.066593e-52 | -8.615850e-47 |
| Msa0134390 | Msa0866510 | 0.852591 | 4.174541e-61 | -8.615850e-47 |
| Msa0134390 | Msa0880310 | 0.808360 | 3.218574e-50 | -8.615850e-47 |
| Msa0134390 | Msa0899080 | 0.831212 | 1.897313e-55 | -8.615850e-47 |
| Msa0134390 | Msa0912110 | 0.833443 | 5.319194e-56 | -8.615850e-47 |
| Msa0134390 | Msa0913120 | 0.821549 | 3.805134e-53 | -8.615850e-47 |
| Msa0134390 | Msa0927190 | 0.821933 | 3.102325e-53 | -8.615850e-47 |
| Msa0134390 | Msa0927890 | 0.832774 | 7.804176e-56 | -8.615850e-47 |
| Msa0134390 | Msa0930950 | 0.821121 | 4.778907e-53 | -8.615850e-47 |
| Msa0134390 | Msa0961200 | 0.823901 | 1.079295e-53 | -8.615850e-47 |
| Msa0134390 | Msa0967250 | 0.812973 | 3.237852e-51 | -8.615850e-47 |
| Msa0134390 | Msa0967260 | 0.845904 | 3.035069e-59 | -8.615850e-47 |
| Msa0134390 | Msa0978290 | 0.802644 | 5.087030e-49 | -8.615850e-47 |
| Msa0134390 | Msa0986620 | 0.809644 | 1.709060e-50 | -8.615850e-47 |
| Msa0134390 | Msa0995660 | 0.826952 | 2.045349e-54 | -8.615850e-47 |
| Msa0134390 | Msa0998940 | 0.826712 | 2.334244e-54 | -8.615850e-47 |
| Msa0134390 | Msa0999480 | 0.838930 | 2.145438e-57 | -8.615850e-47 |
| Msa0134390 | Msa1010470 | 0.801825 | 7.499274e-49 | -8.615850e-47 |
| Msa0134390 | Msa1019370 | 0.835016 | 2.144760e-56 | -8.615850e-47 |
| Msa0134390 | Msa1033230 | 0.814892 | 1.222408e-51 | -8.615850e-47 |
| Msa0134390 | Msa1036020 | -0.828906 | 6.929811e-55 | -8.615850e-47 |
| Msa0134390 | Msa1057340 | 0.833397 | 5.458611e-56 | -8.615850e-47 |
| Msa0134390 | Msa1067910 | 0.800412 | 1.459179e-48 | -8.615850e-47 |
| Msa0134390 | Msa1072770 | 0.801584 | 8.403266e-49 | -8.615850e-47 |
| Msa0134390 | Msa1076280 | -0.827463 | 1.542963e-54 | -8.615850e-47 |
| Msa0134390 | Msa1078590 | 0.801932 | 7.130490e-49 | -8.615850e-47 |
| Msa0134390 | Msa1083140 | 0.800461 | 1.425834e-48 | -8.615850e-47 |
| Msa0134390 | Msa1088740 | 0.826396 | 2.776168e-54 | -8.615850e-47 |
| Msa0134390 | Msa1101300 | 0.814525 | 1.473776e-51 | -8.615850e-47 |
| Msa0134390 | Msa1101610 | 0.852148 | 5.583699e-61 | -8.615850e-47 |
| Msa0134390 | Msa1104420 | 0.802238 | 6.168493e-49 | -8.615850e-47 |
| Msa0134390 | Msa1104430 | 0.812957 | 3.264604e-51 | -8.615850e-47 |
| Msa0134390 | Msa1122550 | -0.805470 | 1.314295e-49 | -8.615850e-47 |
| Msa0134390 | Msa1133440 | 0.865198 | 7.026752e-65 | -8.615850e-47 |
| Msa0134390 | Msa1143860 | 0.819817 | 9.516282e-53 | -8.615850e-47 |
| Msa0134390 | Msa1144420 | 0.805606 | 1.231133e-49 | -8.615850e-47 |
| Msa0134390 | Msa1147870 | 0.821004 | 5.084773e-53 | -8.615850e-47 |
| Msa0134390 | Msa1150130 | 0.830880 | 2.288670e-55 | -8.615850e-47 |
| Msa0134390 | Msa1173410 | 0.814721 | 1.334034e-51 | -8.615850e-47 |
| Msa0134390 | Msa1187810 | 0.833379 | 5.515991e-56 | -8.615850e-47 |
| Msa0134390 | Msa1190300 | 0.800224 | 1.593350e-48 | -8.615850e-47 |
| Msa0134390 | Msa1195860 | 0.800371 | 1.487041e-48 | -8.615850e-47 |
| Msa0134390 | Msa1203840 | 0.843794 | 1.125445e-58 | -8.615850e-47 |
| Msa0134390 | Msa1203860 | 0.861174 | 1.235007e-63 | -8.615850e-47 |
| Msa0134390 | Msa1209790 | 0.805816 | 1.112031e-49 | -8.615850e-47 |
| Msa0134390 | Msa1209800 | 0.827533 | 1.484573e-54 | -8.615850e-47 |
| Msa0134390 | Msa1215540 | 0.810687 | 1.018153e-50 | -8.615850e-47 |
| Msa0134390 | Msa1219060 | 0.842791 | 2.083639e-58 | -8.615850e-47 |
| Msa0134390 | Msa1222400 | -0.810136 | 1.339327e-50 | -8.615850e-47 |
| Msa0134390 | Msa1223620 | -0.807433 | 5.067771e-50 | -8.615850e-47 |
| Msa0134390 | Msa1224820 | 0.805948 | 1.043392e-49 | -8.615850e-47 |
| Msa0134390 | Msa1225140 | 0.817164 | 3.799751e-52 | -8.615850e-47 |
| Msa0134390 | Msa1240240 | 0.816285 | 5.983562e-52 | -8.615850e-47 |
| Msa0134390 | Msa1242990 | 0.803979 | 2.692042e-49 | -8.615850e-47 |
| Msa0134390 | Msa1243630 | 0.833308 | 5.747092e-56 | -8.615850e-47 |
| Msa0134390 | Msa1244220 | 0.834950 | 2.228250e-56 | -8.615850e-47 |
| Msa0134390 | Msa1244660 | 0.819187 | 1.324791e-52 | -8.615850e-47 |
| Msa0134390 | Msa1255030 | 0.808977 | 2.375593e-50 | -8.615850e-47 |
| Msa0134390 | Msa1257960 | 0.800455 | 1.429705e-48 | -8.615850e-47 |
| Msa0134390 | Msa1265900 | 0.803578 | 3.260975e-49 | -8.615850e-47 |
| Msa0134390 | Msa1269730 | 0.809031 | 2.313330e-50 | -8.615850e-47 |
| Msa0134390 | Msa1270860 | 0.803407 | 3.538258e-49 | -8.615850e-47 |
| Msa0134390 | Msa1283120 | 0.849163 | 3.856262e-60 | -8.615850e-47 |
| Msa0134390 | Msa1286660 | 0.804590 | 2.008150e-49 | -8.615850e-47 |
| Msa0134390 | Msa1287100 | 0.812584 | 3.939900e-51 | -8.615850e-47 |
| Msa0134390 | Msa1295480 | 0.800441 | 1.438995e-48 | -8.615850e-47 |
| Msa0134390 | Msa1296270 | 0.853502 | 2.290976e-61 | -8.615850e-47 |
| Msa0134390 | Msa1297220 | 0.803276 | 3.765303e-49 | -8.615850e-47 |
| Msa0134390 | Msa1317240 | 0.808740 | 2.669086e-50 | -8.615850e-47 |
| Msa0134390 | Msa1320660 | 0.811301 | 7.497445e-51 | -8.615850e-47 |
| Msa0134390 | Msa1330910 | 0.860684 | 1.739724e-63 | -8.615850e-47 |
| Msa0134390 | Msa1332690 | 0.836878 | 7.229451e-57 | -8.615850e-47 |
| Msa0134390 | Msa1335210 | 0.813278 | 2.775838e-51 | -8.615850e-47 |
| Msa0134390 | Msa1342400 | 0.829276 | 5.634152e-55 | -8.615850e-47 |
| Msa0134390 | Msa1346220 | 0.822542 | 2.240311e-53 | -8.615850e-47 |
| Msa0134390 | Msa1346340 | 0.822495 | 2.297858e-53 | -8.615850e-47 |
| Msa0134390 | Msa1348330 | -0.849532 | 3.044588e-60 | -8.615850e-47 |
| Msa0134390 | Msa1349640 | 0.818808 | 1.615786e-52 | -8.615850e-47 |
| Msa0134390 | Msa1349850 | 0.824646 | 7.211002e-54 | -8.615850e-47 |
| Msa0134390 | Msa1356730 | 0.800257 | 1.568941e-48 | -8.615850e-47 |
| Msa0134390 | Msa1364520 | 0.828719 | 7.690863e-55 | -8.615850e-47 |
| Msa0134390 | Msa1364850 | 0.846366 | 2.272956e-59 | -8.615850e-47 |
| Msa0134390 | Msa1368660 | 0.837979 | 3.775337e-57 | -8.615850e-47 |
| Msa0134390 | Msa1369390 | 0.812244 | 4.672872e-51 | -8.615850e-47 |
| Msa0134390 | Msa1376010 | 0.817647 | 2.958370e-52 | -8.615850e-47 |
| Msa0134390 | Msa1384620 | 0.817837 | 2.680814e-52 | -8.615850e-47 |
| Msa0134390 | Msa1388070 | 0.822156 | 2.754402e-53 | -8.615850e-47 |
| Msa0134390 | Msa1388270 | 0.843799 | 1.121944e-58 | -8.615850e-47 |
| Msa0134390 | Msa1392570 | 0.812971 | 3.241098e-51 | -8.615850e-47 |
| Msa0134390 | Msa1403950 | 0.826339 | 2.864147e-54 | -8.615850e-47 |
| Msa0134390 | Msa1404810 | 0.809630 | 1.721065e-50 | -8.615850e-47 |
| Msa0134390 | Msa1406540 | -0.801011 | 1.100948e-48 | -8.615850e-47 |
| Msa0134390 | Msa1413220 | 0.813841 | 2.086807e-51 | -8.615850e-47 |
| Msa0134390 | Msa1414000 | 0.840723 | 7.323636e-58 | -8.615850e-47 |
| Msa0134390 | Msa1418840 | 0.817472 | 3.240382e-52 | -8.615850e-47 |
| Msa0134390 | Msa1430630 | 0.825290 | 5.080357e-54 | -8.615850e-47 |
| Msa0134390 | Msa1435690 | 0.840801 | 6.987388e-58 | -8.615850e-47 |
| Msa0134390 | Msa1436660 | 0.817513 | 3.171033e-52 | -8.615850e-47 |
| Msa0134390 | Msa1446220 | 0.829489 | 5.003294e-55 | -8.615850e-47 |
| Msa0134390 | Msa1451690 | 0.884502 | 1.816001e-71 | -8.615850e-47 |
| Msa0134390 | Msa1452200 | 0.821787 | 3.354033e-53 | -8.615850e-47 |
| Msa0134390 | Msa1459630 | 0.810164 | 1.320756e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134390 | MtrunA17_Chr1g0204521 | 89.560 | 182 | 15 | 1 | 20 | 201 | 21 | 198 | 6.40e-109 | 310 |
| Msa0134390 | MtrunA17_Chr1g0204681 | 89.560 | 182 | 15 | 1 | 20 | 201 | 20 | 197 | 1.57e-108 | 309 |
| Msa0134390 | MtrunA17_Chr1g0204671 | 90.110 | 182 | 16 | 1 | 20 | 201 | 21 | 200 | 1.40e-102 | 294 |
| Msa0134390 | MtrunA17_Chr1g0204691 | 75.135 | 185 | 30 | 2 | 17 | 201 | 14 | 182 | 1.06e-94 | 273 |
| Msa0134390 | MtrunA17_Chr1g0204721 | 76.923 | 182 | 26 | 2 | 20 | 201 | 21 | 186 | 1.11e-94 | 273 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134390 | AT3G22840.1 | 52.217 | 203 | 87 | 3 | 1 | 201 | 1 | 195 | 8.22e-63 | 193 |
| Msa0134390 | AT4G14690.1 | 53.465 | 202 | 84 | 4 | 1 | 201 | 1 | 193 | 2.55e-59 | 184 |
Find 66 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACCAATCTAATGGATAAA+TGG | 0.160928 | 1_3:-65908465 | None:intergenic |
| AGCTCAATGAGCACCATTTC+TGG | 0.210857 | 1_3:+65907354 | Msa0134390:CDS |
| TACACAGCAGTTCTATATAT+TGG | 0.266587 | 1_3:-65908211 | None:intergenic |
| TGGTGGAATTCCATGGTTCT+TGG | 0.288858 | 1_3:+65907964 | Msa0134390:CDS |
| GGTGATGATGATGGTGTAAT+TGG | 0.299898 | 1_3:-65907631 | None:intergenic |
| GGTGGAATTCCATGGTTCTT+GGG | 0.299911 | 1_3:+65907965 | Msa0134390:CDS |
| GGTTTGTTTGATCAAATATC+TGG | 0.314167 | 1_3:+65907941 | Msa0134390:CDS |
| TACCAATCTAATGGATAAAT+GGG | 0.318750 | 1_3:-65908464 | None:intergenic |
| TCCCTTGTGTAGATTTCTAT+AGG | 0.342547 | 1_3:+65908154 | Msa0134390:exon |
| CAGAAGGGATGTTGCTGAAT+TGG | 0.358772 | 1_3:-65907392 | None:intergenic |
| TATGTTGGGTTTGATTGCTT+TGG | 0.370659 | 1_3:+65908105 | Msa0134390:CDS |
| CCCTTGTGTAGATTTCTATA+GGG | 0.387029 | 1_3:+65908155 | Msa0134390:exon |
| TGTGATGGTGGTGGTGGTGT+TGG | 0.387566 | 1_3:-65907658 | None:intergenic |
| ACCCCATTTATCCATTAGAT+TGG | 0.392940 | 1_3:+65908462 | Msa0134390:three_prime_UTR |
| GGCCTTTACAGAGTATGTTA+AGG | 0.395379 | 1_3:+65908126 | Msa0134390:CDS |
| AATGGAAGGTTAGCTATGAT+TGG | 0.400708 | 1_3:+65907878 | Msa0134390:CDS |
| GCCTTTACAGAGTATGTTAA+GGG | 0.401917 | 1_3:+65908127 | Msa0134390:CDS |
| TTGTTTGTCGTTCTTTAGTT+TGG | 0.404158 | 1_3:-65907224 | None:intergenic |
| CCATTGATTCTCTCAGGTGC+TGG | 0.411549 | 1_3:-65907860 | None:intergenic |
| GGTGGTGGTGGTGTTGGTGT+TGG | 0.414518 | 1_3:-65907652 | None:intergenic |
| TGCCATCAAGTCCGAAAACT+TGG | 0.420630 | 1_3:-65907828 | None:intergenic |
| GCTGGTTGTGATGGTGGTGG+TGG | 0.430893 | 1_3:-65907664 | None:intergenic |
| AACCTTCCATTGATTCTCTC+AGG | 0.448618 | 1_3:-65907866 | None:intergenic |
| GACTCTAGACTTGCCAGAAA+TGG | 0.452328 | 1_3:-65907367 | None:intergenic |
| TATAGGGAATGAATTAAAGT+TGG | 0.455671 | 1_3:+65908171 | Msa0134390:three_prime_UTR |
| GAATGGAAGAATTGCTATGT+TGG | 0.460944 | 1_3:+65908090 | Msa0134390:CDS |
| GTGATGATGATGGTGTAATT+GGG | 0.461935 | 1_3:-65907630 | None:intergenic |
| TTGTCGTTCTTTAGTTTGGT+AGG | 0.464816 | 1_3:-65907220 | None:intergenic |
| TACCTTTGGTGCGCGAGTAT+AGG | 0.465801 | 1_3:-65907686 | None:intergenic |
| GTGGAATTCCATGGTTCTTG+GGG | 0.468120 | 1_3:+65907966 | Msa0134390:CDS |
| GTTGGTGTTGGTGATGATGA+TGG | 0.479914 | 1_3:-65907640 | None:intergenic |
| TCGGACTTGATGGCATTTGG+TGG | 0.487791 | 1_3:+65907836 | Msa0134390:CDS |
| AATGGAAGAATTGCTATGTT+GGG | 0.499743 | 1_3:+65908091 | Msa0134390:CDS |
| CGGACTTGATGGCATTTGGT+GGG | 0.500178 | 1_3:+65907837 | Msa0134390:CDS |
| CCAGCACCTGAGAGAATCAA+TGG | 0.516939 | 1_3:+65907860 | Msa0134390:CDS |
| CATTAAGGAATCATTATCAA+TGG | 0.519351 | 1_3:+65907302 | Msa0134390:exon |
| AGTGTTGAGTCCAAGTCAAA+AGG | 0.522475 | 1_3:+65908040 | Msa0134390:CDS |
| TTTGGTGCGCGAGTATAGGC+TGG | 0.530750 | 1_3:-65907682 | None:intergenic |
| TAGGCTGGTTGTGATGGTGG+TGG | 0.536961 | 1_3:-65907667 | None:intergenic |
| TCAGATGCTGAGCTGTGGAA+TGG | 0.542277 | 1_3:+65908073 | Msa0134390:CDS |
| AACCTTAATTACCTCAGCCA+TGG | 0.545130 | 1_3:-65907460 | None:intergenic |
| GGTGGAGATAGCAAATGGAC+AGG | 0.547189 | 1_3:+65907919 | Msa0134390:CDS |
| ATAGCATTCCTTCTGAAGCT+AGG | 0.551512 | 1_3:-65907423 | None:intergenic |
| ACCCTTAACATACTCTGTAA+AGG | 0.552111 | 1_3:-65908128 | None:intergenic |
| CGAGTATAGGCTGGTTGTGA+TGG | 0.554321 | 1_3:-65907673 | None:intergenic |
| TTTGATCAAATATCTGGTGG+TGG | 0.559193 | 1_3:+65907947 | Msa0134390:CDS |
| GATGGTGTAATTGGGTCTAC+AGG | 0.568013 | 1_3:-65907622 | None:intergenic |
| TTGTTTGATCAAATATCTGG+TGG | 0.570609 | 1_3:+65907944 | Msa0134390:CDS |
| AAGCTAGGCATGTACACAGA+AGG | 0.579754 | 1_3:-65907408 | None:intergenic |
| TGGACTCAACACTAACACCT+TGG | 0.588832 | 1_3:-65908030 | None:intergenic |
| AGCCTATACTCGCGCACCAA+AGG | 0.589710 | 1_3:+65907684 | Msa0134390:CDS |
| TGTCCTCAGATGCTGAGCTG+TGG | 0.594735 | 1_3:+65908068 | Msa0134390:CDS |
| TATCTTGAAAGTTCGATCCA+TGG | 0.599815 | 1_3:+65907443 | Msa0134390:CDS |
| GTATAGGCTGGTTGTGATGG+TGG | 0.608859 | 1_3:-65907670 | None:intergenic |
| AGCTAGGCATGTACACAGAA+GGG | 0.614155 | 1_3:-65907407 | None:intergenic |
| ATTCCACAGCTCAGCATCTG+AGG | 0.616858 | 1_3:-65908071 | None:intergenic |
| GAAAGTTCGATCCATGGCTG+AGG | 0.622095 | 1_3:+65907449 | Msa0134390:CDS |
| TGTACATGCCTAGCTTCAGA+AGG | 0.622254 | 1_3:+65907415 | Msa0134390:CDS |
| TATCTGGTGGTGGAATTCCA+TGG | 0.624337 | 1_3:+65907957 | Msa0134390:CDS |
| ACACTTGTCCCCAAGAACCA+TGG | 0.633615 | 1_3:-65907974 | None:intergenic |
| GTGGAGATAGCAAATGGACA+GGG | 0.645295 | 1_3:+65907920 | Msa0134390:CDS |
| TCCCTATAGAAATCTACACA+AGG | 0.653374 | 1_3:-65908156 | None:intergenic |
| CACCTGAGAGAATCAATGGA+AGG | 0.653823 | 1_3:+65907864 | Msa0134390:CDS |
| ACCAATCTAATGGATAAATG+GGG | 0.655578 | 1_3:-65908463 | None:intergenic |
| CCCTATAGAAATCTACACAA+GGG | 0.666479 | 1_3:-65908155 | None:intergenic |
| TATAGAAATCTACACAAGGG+AGG | 0.702658 | 1_3:-65908152 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAGATAAACTAAATTTA+AGG | + | chr1_3:65907481-65907500 | Msa0134390:intron | 10.0% |
| !!! | TTTTAGATAAACTAAATTTA+AGG | + | chr1_3:65907481-65907500 | Msa0134390:intron | 10.0% |
| !!! | TTTATGTATAGTATTGATTT+TGG | + | chr1_3:65907747-65907766 | Msa0134390:intron | 15.0% |
| !!! | TTTATGTATAGTATTGATTT+TGG | + | chr1_3:65907747-65907766 | Msa0134390:intron | 15.0% |
| !! | GAATCATAAACATATTATGT+TGG | - | chr1_3:65907573-65907592 | None:intergenic | 20.0% |
| !! | ACATAATATGTTTATGATTC+AGG | + | chr1_3:65907573-65907592 | Msa0134390:intron | 20.0% |
| !! | TTACATTTCTCTTGAAAAAA+AGG | - | chr1_3:65908277-65908296 | None:intergenic | 20.0% |
| !!! | ACTACACTTATTGAAATTTT+AGG | - | chr1_3:65908427-65908446 | None:intergenic | 20.0% |
| !! | GAATCATAAACATATTATGT+TGG | - | chr1_3:65907573-65907592 | None:intergenic | 20.0% |
| !! | ACATAATATGTTTATGATTC+AGG | + | chr1_3:65907573-65907592 | Msa0134390:intron | 20.0% |
| !! | TTACATTTCTCTTGAAAAAA+AGG | - | chr1_3:65908277-65908296 | None:intergenic | 20.0% |
| !!! | ACTACACTTATTGAAATTTT+AGG | - | chr1_3:65908427-65908446 | None:intergenic | 20.0% |
| !! | ATAGACTAGTATATTTTCTG+AGG | - | chr1_3:65907257-65907276 | None:intergenic | 25.0% |
| !! | AGTTTTGCATTGTAACATTA+AGG | + | chr1_3:65907287-65907306 | Msa0134390:five_prime_UTR | 25.0% |
| ! | CATTAAGGAATCATTATCAA+TGG | + | chr1_3:65907302-65907321 | Msa0134390:exon | 25.0% |
| ! | ATCGTCATTATTCAATGAAA+GGG | - | chr1_3:65907788-65907807 | None:intergenic | 25.0% |
| ! | TATCGTCATTATTCAATGAA+AGG | - | chr1_3:65907789-65907808 | None:intergenic | 25.0% |
| ! | TATAGGGAATGAATTAAAGT+TGG | + | chr1_3:65908171-65908190 | Msa0134390:three_prime_UTR | 25.0% |
| !! | TACCAATCTAATGGATAAAT+GGG | - | chr1_3:65908467-65908486 | None:intergenic | 25.0% |
| !! | ATAGACTAGTATATTTTCTG+AGG | - | chr1_3:65907257-65907276 | None:intergenic | 25.0% |
| !! | AGTTTTGCATTGTAACATTA+AGG | + | chr1_3:65907287-65907306 | Msa0134390:five_prime_UTR | 25.0% |
| ! | CATTAAGGAATCATTATCAA+TGG | + | chr1_3:65907302-65907321 | Msa0134390:exon | 25.0% |
| ! | ATCGTCATTATTCAATGAAA+GGG | - | chr1_3:65907788-65907807 | None:intergenic | 25.0% |
| ! | TATCGTCATTATTCAATGAA+AGG | - | chr1_3:65907789-65907808 | None:intergenic | 25.0% |
| ! | TATAGGGAATGAATTAAAGT+TGG | + | chr1_3:65908171-65908190 | Msa0134390:three_prime_UTR | 25.0% |
| !! | TACCAATCTAATGGATAAAT+GGG | - | chr1_3:65908467-65908486 | None:intergenic | 25.0% |
| TTGTTTGTCGTTCTTTAGTT+TGG | - | chr1_3:65907227-65907246 | None:intergenic | 30.0% | |
| ! | GGTTTGTTTGATCAAATATC+TGG | + | chr1_3:65907941-65907960 | Msa0134390:CDS | 30.0% |
| TTGTTTGATCAAATATCTGG+TGG | + | chr1_3:65907944-65907963 | Msa0134390:CDS | 30.0% | |
| !! | TCTTTGATTCCATTTTTCCA+AGG | + | chr1_3:65908013-65908032 | Msa0134390:CDS | 30.0% |
| AATGGAAGAATTGCTATGTT+GGG | + | chr1_3:65908091-65908110 | Msa0134390:CDS | 30.0% | |
| TACACAGCAGTTCTATATAT+TGG | - | chr1_3:65908214-65908233 | None:intergenic | 30.0% | |
| ! | ACCAATCTAATGGATAAATG+GGG | - | chr1_3:65908466-65908485 | None:intergenic | 30.0% |
| TTGTTTGTCGTTCTTTAGTT+TGG | - | chr1_3:65907227-65907246 | None:intergenic | 30.0% | |
| ! | GGTTTGTTTGATCAAATATC+TGG | + | chr1_3:65907941-65907960 | Msa0134390:CDS | 30.0% |
| TTGTTTGATCAAATATCTGG+TGG | + | chr1_3:65907944-65907963 | Msa0134390:CDS | 30.0% | |
| !! | TCTTTGATTCCATTTTTCCA+AGG | + | chr1_3:65908013-65908032 | Msa0134390:CDS | 30.0% |
| AATGGAAGAATTGCTATGTT+GGG | + | chr1_3:65908091-65908110 | Msa0134390:CDS | 30.0% | |
| TACACAGCAGTTCTATATAT+TGG | - | chr1_3:65908214-65908233 | None:intergenic | 30.0% | |
| ! | ACCAATCTAATGGATAAATG+GGG | - | chr1_3:65908466-65908485 | None:intergenic | 30.0% |
| TATCTTGAAAGTTCGATCCA+TGG | + | chr1_3:65907443-65907462 | Msa0134390:CDS | 35.0% | |
| ! | GGTGATGATGATTGTGTAAT+CGG | - | chr1_3:65907552-65907571 | None:intergenic | 35.0% |
| TGAGCAAAAAGAGCAATCAA+AGG | + | chr1_3:65907597-65907616 | Msa0134390:CDS | 35.0% | |
| !! | GTGATGATGATGGTGTAATT+GGG | - | chr1_3:65907633-65907652 | None:intergenic | 35.0% |
| AGAACAGTTATGCTTACCTT+TGG | - | chr1_3:65907703-65907722 | None:intergenic | 35.0% | |
| ! | AATGGAAGGTTAGCTATGAT+TGG | + | chr1_3:65907878-65907897 | Msa0134390:CDS | 35.0% |
| !!! | ATTGGTTTTGTAGCAGCAAT+GGG | + | chr1_3:65907896-65907915 | Msa0134390:CDS | 35.0% |
| TTTGATCAAATATCTGGTGG+TGG | + | chr1_3:65907947-65907966 | Msa0134390:CDS | 35.0% | |
| ACACTAACACCTTGGAAAAA+TGG | - | chr1_3:65908025-65908044 | None:intergenic | 35.0% | |
| GAATGGAAGAATTGCTATGT+TGG | + | chr1_3:65908090-65908109 | Msa0134390:CDS | 35.0% | |
| TATGTTGGGTTTGATTGCTT+TGG | + | chr1_3:65908105-65908124 | Msa0134390:CDS | 35.0% | |
| GCCTTTACAGAGTATGTTAA+GGG | + | chr1_3:65908127-65908146 | Msa0134390:CDS | 35.0% | |
| ACCCTTAACATACTCTGTAA+AGG | - | chr1_3:65908131-65908150 | None:intergenic | 35.0% | |
| TATAGAAATCTACACAAGGG+AGG | - | chr1_3:65908155-65908174 | None:intergenic | 35.0% | |
| TCCCTTGTGTAGATTTCTAT+AGG | + | chr1_3:65908154-65908173 | Msa0134390:exon | 35.0% | |
| CCCTATAGAAATCTACACAA+GGG | - | chr1_3:65908158-65908177 | None:intergenic | 35.0% | |
| CCCTTGTGTAGATTTCTATA+GGG | + | chr1_3:65908155-65908174 | Msa0134390:exon | 35.0% | |
| TCCCTATAGAAATCTACACA+AGG | - | chr1_3:65908159-65908178 | None:intergenic | 35.0% | |
| ! | GACAACAAGCTTTTCATTGT+TGG | - | chr1_3:65908369-65908388 | None:intergenic | 35.0% |
| ACCCCATTTATCCATTAGAT+TGG | + | chr1_3:65908462-65908481 | Msa0134390:three_prime_UTR | 35.0% | |
| TATCTTGAAAGTTCGATCCA+TGG | + | chr1_3:65907443-65907462 | Msa0134390:CDS | 35.0% | |
| ! | GGTGATGATGATTGTGTAAT+CGG | - | chr1_3:65907552-65907571 | None:intergenic | 35.0% |
| TGAGCAAAAAGAGCAATCAA+AGG | + | chr1_3:65907597-65907616 | Msa0134390:CDS | 35.0% | |
| !! | GTGATGATGATGGTGTAATT+GGG | - | chr1_3:65907633-65907652 | None:intergenic | 35.0% |
| AGAACAGTTATGCTTACCTT+TGG | - | chr1_3:65907703-65907722 | None:intergenic | 35.0% | |
| ! | AATGGAAGGTTAGCTATGAT+TGG | + | chr1_3:65907878-65907897 | Msa0134390:CDS | 35.0% |
| !!! | ATTGGTTTTGTAGCAGCAAT+GGG | + | chr1_3:65907896-65907915 | Msa0134390:CDS | 35.0% |
| TTTGATCAAATATCTGGTGG+TGG | + | chr1_3:65907947-65907966 | Msa0134390:CDS | 35.0% | |
| ACACTAACACCTTGGAAAAA+TGG | - | chr1_3:65908025-65908044 | None:intergenic | 35.0% | |
| GAATGGAAGAATTGCTATGT+TGG | + | chr1_3:65908090-65908109 | Msa0134390:CDS | 35.0% | |
| TATGTTGGGTTTGATTGCTT+TGG | + | chr1_3:65908105-65908124 | Msa0134390:CDS | 35.0% | |
| GCCTTTACAGAGTATGTTAA+GGG | + | chr1_3:65908127-65908146 | Msa0134390:CDS | 35.0% | |
| ACCCTTAACATACTCTGTAA+AGG | - | chr1_3:65908131-65908150 | None:intergenic | 35.0% | |
| TATAGAAATCTACACAAGGG+AGG | - | chr1_3:65908155-65908174 | None:intergenic | 35.0% | |
| TCCCTTGTGTAGATTTCTAT+AGG | + | chr1_3:65908154-65908173 | Msa0134390:exon | 35.0% | |
| CCCTATAGAAATCTACACAA+GGG | - | chr1_3:65908158-65908177 | None:intergenic | 35.0% | |
| CCCTTGTGTAGATTTCTATA+GGG | + | chr1_3:65908155-65908174 | Msa0134390:exon | 35.0% | |
| TCCCTATAGAAATCTACACA+AGG | - | chr1_3:65908159-65908178 | None:intergenic | 35.0% | |
| ! | GACAACAAGCTTTTCATTGT+TGG | - | chr1_3:65908369-65908388 | None:intergenic | 35.0% |
| ACCCCATTTATCCATTAGAT+TGG | + | chr1_3:65908462-65908481 | Msa0134390:three_prime_UTR | 35.0% | |
| !! | ATAGCATTCCTTCTGAAGCT+AGG | - | chr1_3:65907426-65907445 | None:intergenic | 40.0% |
| ATCCATGGCTGAGGTAATTA+AGG | + | chr1_3:65907458-65907477 | Msa0134390:intron | 40.0% | |
| AACCTTAATTACCTCAGCCA+TGG | - | chr1_3:65907463-65907482 | None:intergenic | 40.0% | |
| !! | GGTGATGATGATGGTGTAAT+TGG | - | chr1_3:65907634-65907653 | None:intergenic | 40.0% |
| ! | ACAGATGAGCACCAAGTTTT+CGG | + | chr1_3:65907817-65907836 | Msa0134390:intron | 40.0% |
| !! | TTTTCGGACTTGATGGCATT+TGG | + | chr1_3:65907833-65907852 | Msa0134390:CDS | 40.0% |
| !! | AACCTTCCATTGATTCTCTC+AGG | - | chr1_3:65907869-65907888 | None:intergenic | 40.0% |
| !!! | GATTGGTTTTGTAGCAGCAA+TGG | + | chr1_3:65907895-65907914 | Msa0134390:CDS | 40.0% |
| !!! | TTGGTTTTGTAGCAGCAATG+GGG | + | chr1_3:65907897-65907916 | Msa0134390:CDS | 40.0% |
| ! | AGTGTTGAGTCCAAGTCAAA+AGG | + | chr1_3:65908040-65908059 | Msa0134390:CDS | 40.0% |
| GGCCTTTACAGAGTATGTTA+AGG | + | chr1_3:65908126-65908145 | Msa0134390:CDS | 40.0% | |
| !! | ATAGCATTCCTTCTGAAGCT+AGG | - | chr1_3:65907426-65907445 | None:intergenic | 40.0% |
| ATCCATGGCTGAGGTAATTA+AGG | + | chr1_3:65907458-65907477 | Msa0134390:intron | 40.0% | |
| AACCTTAATTACCTCAGCCA+TGG | - | chr1_3:65907463-65907482 | None:intergenic | 40.0% | |
| !! | GGTGATGATGATGGTGTAAT+TGG | - | chr1_3:65907634-65907653 | None:intergenic | 40.0% |
| ! | ACAGATGAGCACCAAGTTTT+CGG | + | chr1_3:65907817-65907836 | Msa0134390:intron | 40.0% |
| !! | TTTTCGGACTTGATGGCATT+TGG | + | chr1_3:65907833-65907852 | Msa0134390:CDS | 40.0% |
| !! | AACCTTCCATTGATTCTCTC+AGG | - | chr1_3:65907869-65907888 | None:intergenic | 40.0% |
| !!! | GATTGGTTTTGTAGCAGCAA+TGG | + | chr1_3:65907895-65907914 | Msa0134390:CDS | 40.0% |
| !!! | TTGGTTTTGTAGCAGCAATG+GGG | + | chr1_3:65907897-65907916 | Msa0134390:CDS | 40.0% |
| ! | AGTGTTGAGTCCAAGTCAAA+AGG | + | chr1_3:65908040-65908059 | Msa0134390:CDS | 40.0% |
| GGCCTTTACAGAGTATGTTA+AGG | + | chr1_3:65908126-65908145 | Msa0134390:CDS | 40.0% | |
| AGCTCAATGAGCACCATTTC+TGG | + | chr1_3:65907354-65907373 | Msa0134390:CDS | 45.0% | |
| GACTCTAGACTTGCCAGAAA+TGG | - | chr1_3:65907370-65907389 | None:intergenic | 45.0% | |
| CAGAAGGGATGTTGCTGAAT+TGG | - | chr1_3:65907395-65907414 | None:intergenic | 45.0% | |
| AGCTAGGCATGTACACAGAA+GGG | - | chr1_3:65907410-65907429 | None:intergenic | 45.0% | |
| AAGCTAGGCATGTACACAGA+AGG | - | chr1_3:65907411-65907430 | None:intergenic | 45.0% | |
| TGTACATGCCTAGCTTCAGA+AGG | + | chr1_3:65907415-65907434 | Msa0134390:CDS | 45.0% | |
| GATGGTGTAATTGGGTCTAC+AGG | - | chr1_3:65907625-65907644 | None:intergenic | 45.0% | |
| !! | GTTGGTGTTGGTGATGATGA+TGG | - | chr1_3:65907643-65907662 | None:intergenic | 45.0% |
| ! | CACCAAGTTTTCGGACTTGA+TGG | + | chr1_3:65907826-65907845 | Msa0134390:CDS | 45.0% |
| TGCCATCAAGTCCGAAAACT+TGG | - | chr1_3:65907831-65907850 | None:intergenic | 45.0% | |
| CACCTGAGAGAATCAATGGA+AGG | + | chr1_3:65907864-65907883 | Msa0134390:CDS | 45.0% | |
| !!! | TGGTTTTGTAGCAGCAATGG+GGG | + | chr1_3:65907898-65907917 | Msa0134390:CDS | 45.0% |
| GTGGAGATAGCAAATGGACA+GGG | + | chr1_3:65907920-65907939 | Msa0134390:CDS | 45.0% | |
| !! | TATCTGGTGGTGGAATTCCA+TGG | + | chr1_3:65907957-65907976 | Msa0134390:CDS | 45.0% |
| TGGTGGAATTCCATGGTTCT+TGG | + | chr1_3:65907964-65907983 | Msa0134390:CDS | 45.0% | |
| GGTGGAATTCCATGGTTCTT+GGG | + | chr1_3:65907965-65907984 | Msa0134390:CDS | 45.0% | |
| GTGGAATTCCATGGTTCTTG+GGG | + | chr1_3:65907966-65907985 | Msa0134390:CDS | 45.0% | |
| TGGACTCAACACTAACACCT+TGG | - | chr1_3:65908033-65908052 | None:intergenic | 45.0% | |
| !! | GGACATGACACCTTTTGACT+TGG | - | chr1_3:65908053-65908072 | None:intergenic | 45.0% |
| AGCTCAATGAGCACCATTTC+TGG | + | chr1_3:65907354-65907373 | Msa0134390:CDS | 45.0% | |
| GACTCTAGACTTGCCAGAAA+TGG | - | chr1_3:65907370-65907389 | None:intergenic | 45.0% | |
| CAGAAGGGATGTTGCTGAAT+TGG | - | chr1_3:65907395-65907414 | None:intergenic | 45.0% | |
| AGCTAGGCATGTACACAGAA+GGG | - | chr1_3:65907410-65907429 | None:intergenic | 45.0% | |
| AAGCTAGGCATGTACACAGA+AGG | - | chr1_3:65907411-65907430 | None:intergenic | 45.0% | |
| TGTACATGCCTAGCTTCAGA+AGG | + | chr1_3:65907415-65907434 | Msa0134390:CDS | 45.0% | |
| GATGGTGTAATTGGGTCTAC+AGG | - | chr1_3:65907625-65907644 | None:intergenic | 45.0% | |
| !! | GTTGGTGTTGGTGATGATGA+TGG | - | chr1_3:65907643-65907662 | None:intergenic | 45.0% |
| ! | CACCAAGTTTTCGGACTTGA+TGG | + | chr1_3:65907826-65907845 | Msa0134390:CDS | 45.0% |
| TGCCATCAAGTCCGAAAACT+TGG | - | chr1_3:65907831-65907850 | None:intergenic | 45.0% | |
| CACCTGAGAGAATCAATGGA+AGG | + | chr1_3:65907864-65907883 | Msa0134390:CDS | 45.0% | |
| !!! | TGGTTTTGTAGCAGCAATGG+GGG | + | chr1_3:65907898-65907917 | Msa0134390:CDS | 45.0% |
| GTGGAGATAGCAAATGGACA+GGG | + | chr1_3:65907920-65907939 | Msa0134390:CDS | 45.0% | |
| !! | TATCTGGTGGTGGAATTCCA+TGG | + | chr1_3:65907957-65907976 | Msa0134390:CDS | 45.0% |
| TGGTGGAATTCCATGGTTCT+TGG | + | chr1_3:65907964-65907983 | Msa0134390:CDS | 45.0% | |
| GGTGGAATTCCATGGTTCTT+GGG | + | chr1_3:65907965-65907984 | Msa0134390:CDS | 45.0% | |
| GTGGAATTCCATGGTTCTTG+GGG | + | chr1_3:65907966-65907985 | Msa0134390:CDS | 45.0% | |
| TGGACTCAACACTAACACCT+TGG | - | chr1_3:65908033-65908052 | None:intergenic | 45.0% | |
| !! | GGACATGACACCTTTTGACT+TGG | - | chr1_3:65908053-65908072 | None:intergenic | 45.0% |
| GAAAGTTCGATCCATGGCTG+AGG | + | chr1_3:65907449-65907468 | Msa0134390:CDS | 50.0% | |
| ! | GTATAGGCTGGTTGTGATGG+TGG | - | chr1_3:65907673-65907692 | None:intergenic | 50.0% |
| ! | CGAGTATAGGCTGGTTGTGA+TGG | - | chr1_3:65907676-65907695 | None:intergenic | 50.0% |
| ! | TACCTTTGGTGCGCGAGTAT+AGG | - | chr1_3:65907689-65907708 | None:intergenic | 50.0% |
| ! | TCGGACTTGATGGCATTTGG+TGG | + | chr1_3:65907836-65907855 | Msa0134390:CDS | 50.0% |
| ! | CGGACTTGATGGCATTTGGT+GGG | + | chr1_3:65907837-65907856 | Msa0134390:CDS | 50.0% |
| !! | CCATTGATTCTCTCAGGTGC+TGG | - | chr1_3:65907863-65907882 | None:intergenic | 50.0% |
| CCAGCACCTGAGAGAATCAA+TGG | + | chr1_3:65907860-65907879 | Msa0134390:CDS | 50.0% | |
| ! | TTTTGTAGCAGCAATGGGGG+TGG | + | chr1_3:65907901-65907920 | Msa0134390:CDS | 50.0% |
| ATGGGGGTGGAGATAGCAAA+TGG | + | chr1_3:65907914-65907933 | Msa0134390:CDS | 50.0% | |
| GGTGGAGATAGCAAATGGAC+AGG | + | chr1_3:65907919-65907938 | Msa0134390:CDS | 50.0% | |
| ACACTTGTCCCCAAGAACCA+TGG | - | chr1_3:65907977-65907996 | None:intergenic | 50.0% | |
| ATTCCACAGCTCAGCATCTG+AGG | - | chr1_3:65908074-65908093 | None:intergenic | 50.0% | |
| TCAGATGCTGAGCTGTGGAA+TGG | + | chr1_3:65908073-65908092 | Msa0134390:CDS | 50.0% | |
| GAAAGTTCGATCCATGGCTG+AGG | + | chr1_3:65907449-65907468 | Msa0134390:CDS | 50.0% | |
| ! | GTATAGGCTGGTTGTGATGG+TGG | - | chr1_3:65907673-65907692 | None:intergenic | 50.0% |
| ! | CGAGTATAGGCTGGTTGTGA+TGG | - | chr1_3:65907676-65907695 | None:intergenic | 50.0% |
| ! | TACCTTTGGTGCGCGAGTAT+AGG | - | chr1_3:65907689-65907708 | None:intergenic | 50.0% |
| ! | TCGGACTTGATGGCATTTGG+TGG | + | chr1_3:65907836-65907855 | Msa0134390:CDS | 50.0% |
| ! | CGGACTTGATGGCATTTGGT+GGG | + | chr1_3:65907837-65907856 | Msa0134390:CDS | 50.0% |
| !! | CCATTGATTCTCTCAGGTGC+TGG | - | chr1_3:65907863-65907882 | None:intergenic | 50.0% |
| CCAGCACCTGAGAGAATCAA+TGG | + | chr1_3:65907860-65907879 | Msa0134390:CDS | 50.0% | |
| ! | TTTTGTAGCAGCAATGGGGG+TGG | + | chr1_3:65907901-65907920 | Msa0134390:CDS | 50.0% |
| ATGGGGGTGGAGATAGCAAA+TGG | + | chr1_3:65907914-65907933 | Msa0134390:CDS | 50.0% | |
| GGTGGAGATAGCAAATGGAC+AGG | + | chr1_3:65907919-65907938 | Msa0134390:CDS | 50.0% | |
| ACACTTGTCCCCAAGAACCA+TGG | - | chr1_3:65907977-65907996 | None:intergenic | 50.0% | |
| ATTCCACAGCTCAGCATCTG+AGG | - | chr1_3:65908074-65908093 | None:intergenic | 50.0% | |
| TCAGATGCTGAGCTGTGGAA+TGG | + | chr1_3:65908073-65908092 | Msa0134390:CDS | 50.0% | |
| !! | TGTGATGGTGGTGGTGGTGT+TGG | - | chr1_3:65907661-65907680 | None:intergenic | 55.0% |
| !! | TAGGCTGGTTGTGATGGTGG+TGG | - | chr1_3:65907670-65907689 | None:intergenic | 55.0% |
| ! | TTTGGTGCGCGAGTATAGGC+TGG | - | chr1_3:65907685-65907704 | None:intergenic | 55.0% |
| AGCCTATACTCGCGCACCAA+AGG | + | chr1_3:65907684-65907703 | Msa0134390:CDS | 55.0% | |
| TGTCCTCAGATGCTGAGCTG+TGG | + | chr1_3:65908068-65908087 | Msa0134390:CDS | 55.0% | |
| !! | TGTGATGGTGGTGGTGGTGT+TGG | - | chr1_3:65907661-65907680 | None:intergenic | 55.0% |
| !! | TAGGCTGGTTGTGATGGTGG+TGG | - | chr1_3:65907670-65907689 | None:intergenic | 55.0% |
| ! | TTTGGTGCGCGAGTATAGGC+TGG | - | chr1_3:65907685-65907704 | None:intergenic | 55.0% |
| AGCCTATACTCGCGCACCAA+AGG | + | chr1_3:65907684-65907703 | Msa0134390:CDS | 55.0% | |
| TGTCCTCAGATGCTGAGCTG+TGG | + | chr1_3:65908068-65908087 | Msa0134390:CDS | 55.0% | |
| !! | GGTGGTGGTGGTGTTGGTGT+TGG | - | chr1_3:65907655-65907674 | None:intergenic | 60.0% |
| !! | GCTGGTTGTGATGGTGGTGG+TGG | - | chr1_3:65907667-65907686 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGTGTTGGTGT+TGG | - | chr1_3:65907655-65907674 | None:intergenic | 60.0% |
| !! | GCTGGTTGTGATGGTGGTGG+TGG | - | chr1_3:65907667-65907686 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 65907223 | 65908486 | 65907223 | ID=Msa0134390;Name=Msa0134390 |
| chr1_3 | mRNA | 65907223 | 65908486 | 65907223 | ID=Msa0134390-mRNA-1;Parent=Msa0134390;Name=Msa0134390-mRNA-1;_AED=0.39;_eAED=0.39;_QI=98|1|1|1|1|1|3|321|201 |
| chr1_3 | exon | 65907223 | 65907470 | 65907223 | ID=Msa0134390-mRNA-1:exon:22439;Parent=Msa0134390-mRNA-1 |
| chr1_3 | exon | 65907595 | 65907705 | 65907595 | ID=Msa0134390-mRNA-1:exon:22440;Parent=Msa0134390-mRNA-1 |
| chr1_3 | exon | 65907821 | 65908486 | 65907821 | ID=Msa0134390-mRNA-1:exon:22441;Parent=Msa0134390-mRNA-1 |
| chr1_3 | five_prime_UTR | 65907223 | 65907320 | 65907223 | ID=Msa0134390-mRNA-1:five_prime_utr;Parent=Msa0134390-mRNA-1 |
| chr1_3 | CDS | 65907321 | 65907470 | 65907321 | ID=Msa0134390-mRNA-1:cds;Parent=Msa0134390-mRNA-1 |
| chr1_3 | CDS | 65907595 | 65907705 | 65907595 | ID=Msa0134390-mRNA-1:cds;Parent=Msa0134390-mRNA-1 |
| chr1_3 | CDS | 65907821 | 65908165 | 65907821 | ID=Msa0134390-mRNA-1:cds;Parent=Msa0134390-mRNA-1 |
| chr1_3 | three_prime_UTR | 65908166 | 65908486 | 65908166 | ID=Msa0134390-mRNA-1:three_prime_utr;Parent=Msa0134390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
