Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134300 | sp|P11432|ELI_PEA | 80.905 | 199 | 35 | 1 | 1 | 199 | 1 | 196 | 4.82e-105 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134300 | Q94F86 | 98.995 | 199 | 2 | 0 | 1 | 199 | 1 | 199 | 2.51e-138 | 394 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002060 | Msa0134300 | 0.807429 | 5.077833e-50 | -8.615850e-47 |
| Msa0005160 | Msa0134300 | 0.811037 | 8.555453e-51 | -8.615850e-47 |
| Msa0006820 | Msa0134300 | 0.826263 | 2.986362e-54 | -8.615850e-47 |
| Msa0015720 | Msa0134300 | 0.809104 | 2.231619e-50 | -8.615850e-47 |
| Msa0016110 | Msa0134300 | 0.825260 | 5.163979e-54 | -8.615850e-47 |
| Msa0016160 | Msa0134300 | 0.816514 | 5.317609e-52 | -8.615850e-47 |
| Msa0021710 | Msa0134300 | 0.832453 | 9.373438e-56 | -8.615850e-47 |
| Msa0032450 | Msa0134300 | 0.844254 | 8.473111e-59 | -8.615850e-47 |
| Msa0039920 | Msa0134300 | 0.947026 | 1.494394e-105 | -8.615850e-47 |
| Msa0040090 | Msa0134300 | 0.946404 | 4.928860e-105 | -8.615850e-47 |
| Msa0041780 | Msa0134300 | 0.809097 | 2.239540e-50 | -8.615850e-47 |
| Msa0046050 | Msa0134300 | 0.805965 | 1.034818e-49 | -8.615850e-47 |
| Msa0046700 | Msa0134300 | 0.800021 | 1.751890e-48 | -8.615850e-47 |
| Msa0050500 | Msa0134300 | 0.820707 | 5.949266e-53 | -8.615850e-47 |
| Msa0053210 | Msa0134300 | 0.820232 | 7.648777e-53 | -8.615850e-47 |
| Msa0057740 | Msa0134300 | 0.837016 | 6.665063e-57 | -8.615850e-47 |
| Msa0080620 | Msa0134300 | 0.847262 | 1.292315e-59 | -8.615850e-47 |
| Msa0087580 | Msa0134300 | 0.999847 | 0.000000e+00 | -8.615850e-47 |
| Msa0087780 | Msa0134300 | 0.929886 | 3.643969e-93 | -8.615850e-47 |
| Msa0087790 | Msa0134300 | 0.930166 | 2.431476e-93 | -8.615850e-47 |
| Msa0096020 | Msa0134300 | 0.862780 | 3.977891e-64 | -8.615850e-47 |
| Msa0096830 | Msa0134300 | 0.810266 | 1.255229e-50 | -8.615850e-47 |
| Msa0098700 | Msa0134300 | 0.827914 | 1.202284e-54 | -8.615850e-47 |
| Msa0100910 | Msa0134300 | 0.812794 | 3.543755e-51 | -8.615850e-47 |
| Msa0103060 | Msa0134300 | 0.831268 | 1.837482e-55 | -8.615850e-47 |
| Msa0109870 | Msa0134300 | 0.817968 | 2.504171e-52 | -8.615850e-47 |
| Msa0116950 | Msa0134300 | 0.816115 | 6.530035e-52 | -8.615850e-47 |
| Msa0133450 | Msa0134300 | 0.856869 | 2.402873e-62 | -8.615850e-47 |
| Msa0134300 | Msa0134380 | 0.945819 | 1.493528e-104 | -8.615850e-47 |
| Msa0134300 | Msa0134390 | 0.919080 | 7.030834e-87 | -8.615850e-47 |
| Msa0134300 | Msa0134400 | 0.912619 | 1.581834e-83 | -8.615850e-47 |
| Msa0134300 | Msa0134410 | 0.846891 | 1.633227e-59 | -8.615850e-47 |
| Msa0134300 | Msa0134420 | 0.926037 | 8.117696e-91 | -8.615850e-47 |
| Msa0134300 | Msa0137010 | 0.821977 | 3.030872e-53 | -8.615850e-47 |
| Msa0134300 | Msa0156260 | 0.810964 | 8.871798e-51 | -8.615850e-47 |
| Msa0134300 | Msa0160470 | 0.822892 | 1.857545e-53 | -8.615850e-47 |
| Msa0134300 | Msa0168470 | 0.813272 | 2.784202e-51 | -8.615850e-47 |
| Msa0134300 | Msa0175720 | 0.839419 | 1.602322e-57 | -8.615850e-47 |
| Msa0134300 | Msa0180590 | 0.919584 | 3.748828e-87 | -8.615850e-47 |
| Msa0134300 | Msa0180600 | 0.955161 | 5.727555e-113 | -8.615850e-47 |
| Msa0134300 | Msa0180780 | 0.953363 | 3.233280e-111 | -8.615850e-47 |
| Msa0134300 | Msa0186510 | 0.878227 | 3.329815e-69 | -8.615850e-47 |
| Msa0134300 | Msa0197730 | 0.801741 | 7.802228e-49 | -8.615850e-47 |
| Msa0134300 | Msa0210880 | 0.806519 | 7.908660e-50 | -8.615850e-47 |
| Msa0134300 | Msa0216010 | 0.817807 | 2.722121e-52 | -8.615850e-47 |
| Msa0134300 | Msa0229750 | 0.801362 | 9.333430e-49 | -8.615850e-47 |
| Msa0134300 | Msa0230980 | 0.849863 | 2.460357e-60 | -8.615850e-47 |
| Msa0134300 | Msa0238960 | 0.828075 | 1.099422e-54 | -8.615850e-47 |
| Msa0134300 | Msa0243160 | 0.803124 | 4.049489e-49 | -8.615850e-47 |
| Msa0134300 | Msa0246300 | 0.800807 | 1.211877e-48 | -8.615850e-47 |
| Msa0134300 | Msa0270460 | 0.855452 | 6.247788e-62 | -8.615850e-47 |
| Msa0134300 | Msa0276800 | 0.807650 | 4.556464e-50 | -8.615850e-47 |
| Msa0134300 | Msa0290600 | 0.810169 | 1.317371e-50 | -8.615850e-47 |
| Msa0134300 | Msa0293000 | 0.823316 | 1.478916e-53 | -8.615850e-47 |
| Msa0134300 | Msa0297860 | 0.813468 | 2.520673e-51 | -8.615850e-47 |
| Msa0134300 | Msa0309060 | 0.847754 | 9.465530e-60 | -8.615850e-47 |
| Msa0134300 | Msa0316720 | 0.822891 | 1.858173e-53 | -8.615850e-47 |
| Msa0134300 | Msa0317360 | 0.818732 | 1.681289e-52 | -8.615850e-47 |
| Msa0134300 | Msa0335860 | 0.800392 | 1.472829e-48 | -8.615850e-47 |
| Msa0134300 | Msa0348760 | 0.810545 | 1.092652e-50 | -8.615850e-47 |
| Msa0134300 | Msa0364010 | 0.801145 | 1.033865e-48 | -8.615850e-47 |
| Msa0134300 | Msa0369430 | 0.811945 | 5.430654e-51 | -8.615850e-47 |
| Msa0134300 | Msa0373950 | 0.806928 | 6.482605e-50 | -8.615850e-47 |
| Msa0134300 | Msa0377460 | 0.805175 | 1.515190e-49 | -8.615850e-47 |
| Msa0134300 | Msa0378670 | 0.820430 | 6.887608e-53 | -8.615850e-47 |
| Msa0134300 | Msa0378700 | 0.838654 | 2.529599e-57 | -8.615850e-47 |
| Msa0134300 | Msa0385770 | 0.849804 | 2.555933e-60 | -8.615850e-47 |
| Msa0134300 | Msa0391160 | 0.817771 | 2.773764e-52 | -8.615850e-47 |
| Msa0134300 | Msa0393140 | 0.815304 | 9.900166e-52 | -8.615850e-47 |
| Msa0134300 | Msa0419040 | 0.804711 | 1.894703e-49 | -8.615850e-47 |
| Msa0134300 | Msa0423110 | 0.812834 | 3.473033e-51 | -8.615850e-47 |
| Msa0134300 | Msa0426860 | 0.843590 | 1.276058e-58 | -8.615850e-47 |
| Msa0134300 | Msa0426890 | 0.827769 | 1.302874e-54 | -8.615850e-47 |
| Msa0134300 | Msa0428310 | 0.802375 | 5.779512e-49 | -8.615850e-47 |
| Msa0134300 | Msa0428330 | 0.813374 | 2.644147e-51 | -8.615850e-47 |
| Msa0134300 | Msa0430040 | 0.821316 | 4.308427e-53 | -8.615850e-47 |
| Msa0134300 | Msa0431940 | 0.810230 | 1.277850e-50 | -8.615850e-47 |
| Msa0134300 | Msa0433270 | 0.868900 | 4.627904e-66 | -8.615850e-47 |
| Msa0134300 | Msa0437790 | 0.812116 | 4.985397e-51 | -8.615850e-47 |
| Msa0134300 | Msa0443250 | 0.808285 | 3.338303e-50 | -8.615850e-47 |
| Msa0134300 | Msa0456480 | 0.858887 | 6.050683e-63 | -8.615850e-47 |
| Msa0134300 | Msa0463540 | 0.814291 | 1.660372e-51 | -8.615850e-47 |
| Msa0134300 | Msa0469840 | 0.803539 | 3.321659e-49 | -8.615850e-47 |
| Msa0134300 | Msa0474670 | 0.800885 | 1.168319e-48 | -8.615850e-47 |
| Msa0134300 | Msa0481050 | 0.823313 | 1.481246e-53 | -8.615850e-47 |
| Msa0134300 | Msa0500490 | 0.815635 | 8.355871e-52 | -8.615850e-47 |
| Msa0134300 | Msa0510550 | 0.813088 | 3.055765e-51 | -8.615850e-47 |
| Msa0134300 | Msa0511600 | 0.869462 | 3.040785e-66 | -8.615850e-47 |
| Msa0134300 | Msa0517400 | 0.802042 | 6.767846e-49 | -8.615850e-47 |
| Msa0134300 | Msa0519060 | 0.811573 | 6.542234e-51 | -8.615850e-47 |
| Msa0134300 | Msa0520810 | 0.801718 | 7.890097e-49 | -8.615850e-47 |
| Msa0134300 | Msa0521940 | -0.820292 | 7.408045e-53 | -8.615850e-47 |
| Msa0134300 | Msa0534890 | 0.817278 | 3.582813e-52 | -8.615850e-47 |
| Msa0134300 | Msa0549330 | 0.822353 | 2.479088e-53 | -8.615850e-47 |
| Msa0134300 | Msa0558890 | 0.800421 | 1.452917e-48 | -8.615850e-47 |
| Msa0134300 | Msa0561760 | 0.801994 | 6.925016e-49 | -8.615850e-47 |
| Msa0134300 | Msa0568490 | 0.802246 | 6.146061e-49 | -8.615850e-47 |
| Msa0134300 | Msa0580540 | 0.877805 | 4.680675e-69 | -8.615850e-47 |
| Msa0134300 | Msa0581240 | 0.804781 | 1.831942e-49 | -8.615850e-47 |
| Msa0134300 | Msa0595780 | 0.808456 | 3.069133e-50 | -8.615850e-47 |
| Msa0134300 | Msa0604640 | 0.810954 | 8.916800e-51 | -8.615850e-47 |
| Msa0134300 | Msa0615850 | 0.827442 | 1.560643e-54 | -8.615850e-47 |
| Msa0134300 | Msa0617120 | 0.848625 | 5.439809e-60 | -8.615850e-47 |
| Msa0134300 | Msa0620750 | 0.801653 | 8.135640e-49 | -8.615850e-47 |
| Msa0134300 | Msa0621780 | 0.874184 | 8.232881e-68 | -8.615850e-47 |
| Msa0134300 | Msa0630850 | 0.802397 | 5.719220e-49 | -8.615850e-47 |
| Msa0134300 | Msa0631340 | 0.806647 | 7.433319e-50 | -8.615850e-47 |
| Msa0134300 | Msa0638040 | 0.806303 | 8.784914e-50 | -8.615850e-47 |
| Msa0134300 | Msa0667680 | 0.803801 | 2.930339e-49 | -8.615850e-47 |
| Msa0134300 | Msa0669710 | 0.809906 | 1.500833e-50 | -8.615850e-47 |
| Msa0134300 | Msa0669750 | 0.810709 | 1.007257e-50 | -8.615850e-47 |
| Msa0134300 | Msa0677250 | 0.817992 | 2.473470e-52 | -8.615850e-47 |
| Msa0134300 | Msa0691100 | 0.801116 | 1.048201e-48 | -8.615850e-47 |
| Msa0134300 | Msa0698900 | 0.835143 | 1.992494e-56 | -8.615850e-47 |
| Msa0134300 | Msa0704780 | 0.817797 | 2.736784e-52 | -8.615850e-47 |
| Msa0134300 | Msa0705130 | 0.817259 | 3.617956e-52 | -8.615850e-47 |
| Msa0134300 | Msa0712670 | 0.829086 | 6.267401e-55 | -8.615850e-47 |
| Msa0134300 | Msa0736930 | 0.811378 | 7.215483e-51 | -8.615850e-47 |
| Msa0134300 | Msa0739610 | 0.811301 | 7.497181e-51 | -8.615850e-47 |
| Msa0134300 | Msa0747900 | 0.808889 | 2.480400e-50 | -8.615850e-47 |
| Msa0134300 | Msa0748980 | 0.815489 | 9.005967e-52 | -8.615850e-47 |
| Msa0134300 | Msa0752830 | 0.822887 | 1.862784e-53 | -8.615850e-47 |
| Msa0134300 | Msa0754350 | 0.873519 | 1.381243e-67 | -8.615850e-47 |
| Msa0134300 | Msa0754790 | 0.845530 | 3.833992e-59 | -8.615850e-47 |
| Msa0134300 | Msa0754840 | 0.853314 | 2.594287e-61 | -8.615850e-47 |
| Msa0134300 | Msa0756440 | 0.825806 | 3.834747e-54 | -8.615850e-47 |
| Msa0134300 | Msa0763350 | 0.819510 | 1.118596e-52 | -8.615850e-47 |
| Msa0134300 | Msa0766880 | 0.800738 | 1.252136e-48 | -8.615850e-47 |
| Msa0134300 | Msa0776290 | 0.811021 | 8.621517e-51 | -8.615850e-47 |
| Msa0134300 | Msa0776590 | 0.852392 | 4.756777e-61 | -8.615850e-47 |
| Msa0134300 | Msa0793060 | 0.801873 | 7.331370e-49 | -8.615850e-47 |
| Msa0134300 | Msa0795710 | 0.873404 | 1.510044e-67 | -8.615850e-47 |
| Msa0134300 | Msa0813630 | 0.800290 | 1.545002e-48 | -8.615850e-47 |
| Msa0134300 | Msa0822370 | 0.810804 | 9.606726e-51 | -8.615850e-47 |
| Msa0134300 | Msa0825520 | 0.823104 | 1.658042e-53 | -8.615850e-47 |
| Msa0134300 | Msa0825960 | 0.807939 | 3.956136e-50 | -8.615850e-47 |
| Msa0134300 | Msa0828810 | 0.822739 | 2.016284e-53 | -8.615850e-47 |
| Msa0134300 | Msa0833450 | 0.845500 | 3.907974e-59 | -8.615850e-47 |
| Msa0134300 | Msa0833910 | 0.821449 | 4.013152e-53 | -8.615850e-47 |
| Msa0134300 | Msa0834160 | 0.823737 | 1.179103e-53 | -8.615850e-47 |
| Msa0134300 | Msa0835550 | 0.813457 | 2.535194e-51 | -8.615850e-47 |
| Msa0134300 | Msa0848860 | 0.809915 | 1.494260e-50 | -8.615850e-47 |
| Msa0134300 | Msa0854190 | 0.831884 | 1.295774e-55 | -8.615850e-47 |
| Msa0134300 | Msa0864730 | 0.823949 | 1.051254e-53 | -8.615850e-47 |
| Msa0134300 | Msa0864750 | 0.820117 | 8.124984e-53 | -8.615850e-47 |
| Msa0134300 | Msa0866510 | 0.841376 | 4.934873e-58 | -8.615850e-47 |
| Msa0134300 | Msa0899080 | 0.828930 | 6.835915e-55 | -8.615850e-47 |
| Msa0134300 | Msa0899730 | 0.822799 | 1.952121e-53 | -8.615850e-47 |
| Msa0134300 | Msa0913120 | 0.813208 | 2.875679e-51 | -8.615850e-47 |
| Msa0134300 | Msa0927190 | 0.806767 | 7.011189e-50 | -8.615850e-47 |
| Msa0134300 | Msa0927890 | 0.808876 | 2.496740e-50 | -8.615850e-47 |
| Msa0134300 | Msa0930950 | 0.830832 | 2.351426e-55 | -8.615850e-47 |
| Msa0134300 | Msa0950410 | 0.813206 | 2.878258e-51 | -8.615850e-47 |
| Msa0134300 | Msa0964650 | 0.818772 | 1.646097e-52 | -8.615850e-47 |
| Msa0134300 | Msa0966410 | 0.813095 | 3.044668e-51 | -8.615850e-47 |
| Msa0134300 | Msa0967260 | 0.802183 | 6.331022e-49 | -8.615850e-47 |
| Msa0134300 | Msa0986620 | 0.800760 | 1.239189e-48 | -8.615850e-47 |
| Msa0134300 | Msa0999480 | 0.834424 | 3.022264e-56 | -8.615850e-47 |
| Msa0134300 | Msa1019220 | -0.809611 | 1.736834e-50 | -8.615850e-47 |
| Msa0134300 | Msa1019230 | -0.806333 | 8.658037e-50 | -8.615850e-47 |
| Msa0134300 | Msa1019370 | 0.822696 | 2.063707e-53 | -8.615850e-47 |
| Msa0134300 | Msa1036020 | -0.808855 | 2.523089e-50 | -8.615850e-47 |
| Msa0134300 | Msa1040390 | 0.803378 | 3.587990e-49 | -8.615850e-47 |
| Msa0134300 | Msa1057320 | 0.807215 | 5.635757e-50 | -8.615850e-47 |
| Msa0134300 | Msa1057340 | 0.830513 | 2.814825e-55 | -8.615850e-47 |
| Msa0134300 | Msa1067910 | 0.806804 | 6.886261e-50 | -8.615850e-47 |
| Msa0134300 | Msa1083140 | 0.819313 | 1.239958e-52 | -8.615850e-47 |
| Msa0134300 | Msa1102200 | 0.820948 | 5.237034e-53 | -8.615850e-47 |
| Msa0134300 | Msa1121580 | 0.815317 | 9.837997e-52 | -8.615850e-47 |
| Msa0134300 | Msa1124440 | 0.811023 | 8.612655e-51 | -8.615850e-47 |
| Msa0134300 | Msa1127900 | 0.825577 | 4.344744e-54 | -8.615850e-47 |
| Msa0134300 | Msa1130660 | 0.807590 | 4.693195e-50 | -8.615850e-47 |
| Msa0134300 | Msa1132540 | 0.801318 | 9.529568e-49 | -8.615850e-47 |
| Msa0134300 | Msa1133440 | 0.823375 | 1.432860e-53 | -8.615850e-47 |
| Msa0134300 | Msa1138600 | 0.806078 | 9.795094e-50 | -8.615850e-47 |
| Msa0134300 | Msa1147870 | 0.802614 | 5.161148e-49 | -8.615850e-47 |
| Msa0134300 | Msa1165810 | 0.828550 | 8.448223e-55 | -8.615850e-47 |
| Msa0134300 | Msa1173410 | 0.810302 | 1.233467e-50 | -8.615850e-47 |
| Msa0134300 | Msa1187810 | 0.837930 | 3.887376e-57 | -8.615850e-47 |
| Msa0134300 | Msa1190320 | 0.805298 | 1.428224e-49 | -8.615850e-47 |
| Msa0134300 | Msa1195860 | 0.832657 | 8.342066e-56 | -8.615850e-47 |
| Msa0134300 | Msa1203840 | 0.821287 | 4.375247e-53 | -8.615850e-47 |
| Msa0134300 | Msa1203860 | 0.851803 | 6.996463e-61 | -8.615850e-47 |
| Msa0134300 | Msa1209240 | 0.821708 | 3.497590e-53 | -8.615850e-47 |
| Msa0134300 | Msa1209800 | 0.800465 | 1.422994e-48 | -8.615850e-47 |
| Msa0134300 | Msa1215540 | 0.813030 | 3.146141e-51 | -8.615850e-47 |
| Msa0134300 | Msa1218720 | 0.807627 | 4.608963e-50 | -8.615850e-47 |
| Msa0134300 | Msa1219060 | 0.817184 | 3.762399e-52 | -8.615850e-47 |
| Msa0134300 | Msa1220740 | 0.813567 | 2.398223e-51 | -8.615850e-47 |
| Msa0134300 | Msa1242010 | 0.803007 | 4.280560e-49 | -8.615850e-47 |
| Msa0134300 | Msa1242990 | 0.809670 | 1.686888e-50 | -8.615850e-47 |
| Msa0134300 | Msa1243630 | 0.829058 | 6.364607e-55 | -8.615850e-47 |
| Msa0134300 | Msa1244220 | 0.832075 | 1.162203e-55 | -8.615850e-47 |
| Msa0134300 | Msa1244660 | 0.820813 | 5.624688e-53 | -8.615850e-47 |
| Msa0134300 | Msa1248400 | 0.801357 | 9.356285e-49 | -8.615850e-47 |
| Msa0134300 | Msa1258020 | -0.809645 | 1.708382e-50 | -8.615850e-47 |
| Msa0134300 | Msa1258100 | 0.802913 | 4.476110e-49 | -8.615850e-47 |
| Msa0134300 | Msa1283120 | 0.864082 | 1.570478e-64 | -8.615850e-47 |
| Msa0134300 | Msa1286910 | 0.826257 | 2.996104e-54 | -8.615850e-47 |
| Msa0134300 | Msa1296270 | 0.819128 | 1.366397e-52 | -8.615850e-47 |
| Msa0134300 | Msa1327040 | 0.838293 | 3.133910e-57 | -8.615850e-47 |
| Msa0134300 | Msa1330910 | 0.834755 | 2.495512e-56 | -8.615850e-47 |
| Msa0134300 | Msa1332690 | 0.803752 | 3.000897e-49 | -8.615850e-47 |
| Msa0134300 | Msa1334650 | 0.812021 | 5.228354e-51 | -8.615850e-47 |
| Msa0134300 | Msa1335210 | 0.806812 | 6.859436e-50 | -8.615850e-47 |
| Msa0134300 | Msa1348330 | -0.837982 | 3.769549e-57 | -8.615850e-47 |
| Msa0134300 | Msa1349640 | 0.807042 | 6.132308e-50 | -8.615850e-47 |
| Msa0134300 | Msa1349850 | 0.840136 | 1.042549e-57 | -8.615850e-47 |
| Msa0134300 | Msa1356730 | 0.806024 | 1.005314e-49 | -8.615850e-47 |
| Msa0134300 | Msa1358790 | 0.815256 | 1.014670e-51 | -8.615850e-47 |
| Msa0134300 | Msa1364520 | 0.817478 | 3.230397e-52 | -8.615850e-47 |
| Msa0134300 | Msa1364850 | 0.870076 | 1.917994e-66 | -8.615850e-47 |
| Msa0134300 | Msa1365210 | 0.823430 | 1.391261e-53 | -8.615850e-47 |
| Msa0134300 | Msa1368660 | 0.801733 | 7.831602e-49 | -8.615850e-47 |
| Msa0134300 | Msa1369390 | 0.802475 | 5.512467e-49 | -8.615850e-47 |
| Msa0134300 | Msa1373390 | 0.800367 | 1.490287e-48 | -8.615850e-47 |
| Msa0134300 | Msa1384620 | 0.821435 | 4.042951e-53 | -8.615850e-47 |
| Msa0134300 | Msa1388070 | 0.811710 | 6.109003e-51 | -8.615850e-47 |
| Msa0134300 | Msa1388520 | 0.820994 | 5.112020e-53 | -8.615850e-47 |
| Msa0134300 | Msa1395580 | 0.802809 | 4.704347e-49 | -8.615850e-47 |
| Msa0134300 | Msa1401650 | -0.809213 | 2.114411e-50 | -8.615850e-47 |
| Msa0134300 | Msa1403950 | 0.867162 | 1.676509e-65 | -8.615850e-47 |
| Msa0134300 | Msa1404810 | 0.811715 | 6.095966e-51 | -8.615850e-47 |
| Msa0134300 | Msa1413220 | 0.807654 | 4.548050e-50 | -8.615850e-47 |
| Msa0134300 | Msa1413900 | 0.805013 | 1.638505e-49 | -8.615850e-47 |
| Msa0134300 | Msa1420600 | 0.802117 | 6.531853e-49 | -8.615850e-47 |
| Msa0134300 | Msa1430630 | 0.815865 | 7.427449e-52 | -8.615850e-47 |
| Msa0134300 | Msa1435690 | 0.875207 | 3.695973e-68 | -8.615850e-47 |
| Msa0134300 | Msa1451690 | 0.872274 | 3.605541e-67 | -8.615850e-47 |
| Msa0134300 | Msa1452200 | 0.807352 | 5.272108e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134300 | MtrunA17_Chr1g0204671 | 97.000 | 200 | 5 | 1 | 1 | 199 | 1 | 200 | 1.78e-138 | 385 |
| Msa0134300 | MtrunA17_Chr1g0204681 | 91.960 | 199 | 14 | 1 | 1 | 199 | 1 | 197 | 4.20e-110 | 313 |
| Msa0134300 | MtrunA17_Chr1g0204521 | 88.333 | 180 | 19 | 1 | 20 | 199 | 21 | 198 | 3.57e-109 | 310 |
| Msa0134300 | MtrunA17_Chr1g0204721 | 81.667 | 180 | 19 | 2 | 20 | 199 | 21 | 186 | 1.98e-101 | 290 |
| Msa0134300 | MtrunA17_Chr1g0204691 | 78.142 | 183 | 26 | 2 | 17 | 199 | 14 | 182 | 1.34e-98 | 283 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134300 | AT3G22840.1 | 53.731 | 201 | 85 | 4 | 1 | 199 | 1 | 195 | 2.83e-62 | 192 |
| Msa0134300 | AT4G14690.1 | 50.990 | 202 | 87 | 4 | 1 | 199 | 1 | 193 | 9.11e-57 | 178 |
Find 86 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAAGGGATGTTGTTAAAT+TGG | 0.214729 | 1_3:+65853730 | None:intergenic |
| CTCAGTTATCATCCCCATTC+AGG | 0.237476 | 1_3:-65852630 | Msa0134300:three_prime_UTR |
| GGTGCTGATGGTGGTGTAAT+TGG | 0.245963 | 1_3:+65853442 | None:intergenic |
| TCACTTCACTACACCTTAGA+TGG | 0.287308 | 1_3:+65853902 | None:intergenic |
| TGGTGGAATTCCATGGTTCT+TGG | 0.288858 | 1_3:-65853097 | Msa0134300:CDS |
| GTTGTTTATATAGACTAAAA+TGG | 0.292529 | 1_3:+65853955 | None:intergenic |
| GGTGGAATTCCATGGTTCTT+GGG | 0.299911 | 1_3:-65853096 | Msa0134300:CDS |
| CTACCAACCTTAACCATCTA+AGG | 0.316626 | 1_3:-65853915 | Msa0134300:five_prime_UTR |
| ATGCATTGTGAGGGATATTA+TGG | 0.340683 | 1_3:+65853979 | None:intergenic |
| GTTGGTTGTGGTTGTGGTGG+TGG | 0.344690 | 1_3:+65853415 | None:intergenic |
| TGTGGTTGTGGTGGTGGAGT+TGG | 0.352890 | 1_3:+65853421 | None:intergenic |
| ATTGGGTCTACAGGCACCTT+TGG | 0.360861 | 1_3:+65853460 | None:intergenic |
| CACTACACCTTAGATGGTTA+AGG | 0.368917 | 1_3:+65853908 | None:intergenic |
| TATGTTGGGTTTGATTGCTT+TGG | 0.370659 | 1_3:-65852956 | Msa0134300:CDS |
| AATGGAAGGTTGGCTATGAT+TGG | 0.393839 | 1_3:-65853183 | Msa0134300:CDS |
| GGTCTGTTTGATCAAATATC+TGG | 0.404965 | 1_3:-65853120 | Msa0134300:CDS |
| CCATTGATTCTCTCAGGTGC+TGG | 0.411549 | 1_3:+65853201 | None:intergenic |
| GGTGGTGGAGTTGGTGCTGA+TGG | 0.417357 | 1_3:+65853430 | None:intergenic |
| TTAGATGCAATTGAAATAGA+AGG | 0.427654 | 1_3:-65852700 | Msa0134300:three_prime_UTR |
| AACCTTCCATTGATTCTCTC+AGG | 0.436061 | 1_3:+65853195 | None:intergenic |
| TAATTAGAAACTCCCTGAAT+GGG | 0.439145 | 1_3:+65852617 | None:intergenic |
| GTGCTGATGGTGGTGTAATT+GGG | 0.440700 | 1_3:+65853443 | None:intergenic |
| ATATGAAAAGTGGAAAGAAA+TGG | 0.440968 | 1_3:-65852672 | Msa0134300:three_prime_UTR |
| GTTAATGTTTATAGAATTTG+CGG | 0.445036 | 1_3:-65852875 | Msa0134300:three_prime_UTR |
| GTTCAAATTGTATTATCATC+AGG | 0.447050 | 1_3:+65852525 | None:intergenic |
| GTATAGGTTGGTTGTGGTTG+TGG | 0.448474 | 1_3:+65853409 | None:intergenic |
| GAATGGTAGAATTGCTATGT+TGG | 0.450278 | 1_3:-65852971 | Msa0134300:CDS |
| CTAGCATTTCTTCTCAAGCT+TGG | 0.450671 | 1_3:+65853699 | None:intergenic |
| GAAGGTAAACATATGAAAAG+TGG | 0.450859 | 1_3:-65852682 | Msa0134300:three_prime_UTR |
| CACCTTTGGTGAACGTGTAT+AGG | 0.459386 | 1_3:+65853393 | None:intergenic |
| TTGTTAAATTGGTTAACTCT+AGG | 0.463045 | 1_3:+65853741 | None:intergenic |
| GTGGAATTCCATGGTTCTTG+GGG | 0.468120 | 1_3:-65853095 | Msa0134300:CDS |
| GGTGGAGTTGGTGCTGATGG+TGG | 0.468618 | 1_3:+65853433 | None:intergenic |
| TTAATTAGAAACTCCCTGAA+TGG | 0.471482 | 1_3:+65852616 | None:intergenic |
| CATTAAGAACTTATAATCAA+TGG | 0.480276 | 1_3:-65853820 | Msa0134300:exon |
| CGGATTTGATGGCATTTGGT+GGG | 0.485102 | 1_3:-65853224 | Msa0134300:CDS |
| TCGGATTTGATGGCATTTGG+TGG | 0.487791 | 1_3:-65853225 | Msa0134300:CDS |
| GAAATGCTAGCCTCAAAGTT+CGG | 0.488413 | 1_3:-65853686 | Msa0134300:CDS |
| GGTAGGTATAGCATTGAAGA+TGG | 0.490124 | 1_3:+65853933 | None:intergenic |
| AATGGTAGAATTGCTATGTT+GGG | 0.492247 | 1_3:-65852970 | Msa0134300:CDS |
| AGGGAGTTTCTAATTAACAT+AGG | 0.494734 | 1_3:-65852610 | Msa0134300:three_prime_UTR |
| TCAGTTATCATCCCCATTCA+GGG | 0.498313 | 1_3:-65852629 | Msa0134300:three_prime_UTR |
| TCTAGGCCTGCTAGAAATGC+TGG | 0.515845 | 1_3:+65853758 | None:intergenic |
| GGTGGTGTAATTGGGTCTAC+AGG | 0.516474 | 1_3:+65853451 | None:intergenic |
| CCAGCACCTGAGAGAATCAA+TGG | 0.516939 | 1_3:-65853201 | Msa0134300:CDS |
| TAGGTTGGTTGTGGTTGTGG+TGG | 0.520190 | 1_3:+65853412 | None:intergenic |
| AGTGTGGAGTCTAAGTCAAA+AGG | 0.525000 | 1_3:-65853021 | Msa0134300:CDS |
| TAATGTGTTGAGCGCTCAAA+TGG | 0.525410 | 1_3:+65852550 | None:intergenic |
| CAGCCATGGACCGAACTTTG+AGG | 0.527132 | 1_3:+65853676 | None:intergenic |
| CGAAAACATTACCTCAGCCA+TGG | 0.528935 | 1_3:+65853662 | None:intergenic |
| CAAAGTTCGGTCCATGGCTG+AGG | 0.533870 | 1_3:-65853673 | Msa0134300:intron |
| GGATGGCTTTGTAAAACACT+TGG | 0.536418 | 1_3:+65853872 | None:intergenic |
| GGTGGAGATAGCAAATGGAC+AGG | 0.537366 | 1_3:-65853142 | Msa0134300:CDS |
| GAGCGCTCAAATGGTTGCAC+AGG | 0.540127 | 1_3:+65852559 | None:intergenic |
| CCATGACCAGCATTTCTAGC+AGG | 0.549312 | 1_3:-65853764 | Msa0134300:CDS |
| CCTGCTAGAAATGCTGGTCA+TGG | 0.550870 | 1_3:+65853764 | None:intergenic |
| CTTAGATGGTTAAGGTTGGT+AGG | 0.553528 | 1_3:+65853916 | None:intergenic |
| GAACGTGTATAGGTTGGTTG+TGG | 0.557227 | 1_3:+65853403 | None:intergenic |
| TGAGAGAATCAATGGAAGGT+TGG | 0.560259 | 1_3:-65853193 | Msa0134300:CDS |
| TAGCCTCAAAGTTCGGTCCA+TGG | 0.581082 | 1_3:-65853679 | Msa0134300:CDS |
| AAGCTTGGCATATACACAGA+AGG | 0.589450 | 1_3:+65853714 | None:intergenic |
| CTATAGAAATCTATTACACA+AGG | 0.595515 | 1_3:+65852905 | None:intergenic |
| TAGACTCCACACTAACACCT+TGG | 0.597870 | 1_3:+65853031 | None:intergenic |
| AACCTATACACGTTCACCAA+AGG | 0.599727 | 1_3:-65853395 | Msa0134300:intron |
| TGTCCTCAGATGCTGAGTTG+TGG | 0.599794 | 1_3:-65852993 | Msa0134300:CDS |
| TTATCAAGAGAATTCAATTG+CGG | 0.603450 | 1_3:-65852778 | Msa0134300:three_prime_UTR |
| ATTCCACAACTCAGCATCTG+AGG | 0.606044 | 1_3:+65852990 | None:intergenic |
| TAAAATGGAATGCATTGTGA+GGG | 0.612817 | 1_3:+65853970 | None:intergenic |
| TTTGATCAAATATCTGGTGG+TGG | 0.612951 | 1_3:-65853114 | Msa0134300:CDS |
| TTTGGTGAACGTGTATAGGT+TGG | 0.617927 | 1_3:+65853397 | None:intergenic |
| CTAAAATGGAATGCATTGTG+AGG | 0.619896 | 1_3:+65853969 | None:intergenic |
| AGCTTGGCATATACACAGAA+GGG | 0.622653 | 1_3:+65853715 | None:intergenic |
| TATCTGGTGGTGGAATTCCA+TGG | 0.624337 | 1_3:-65853104 | Msa0134300:CDS |
| CTGTTTGATCAAATATCTGG+TGG | 0.626873 | 1_3:-65853117 | Msa0134300:CDS |
| ACACCTTAGATGGTTAAGGT+TGG | 0.627193 | 1_3:+65853912 | None:intergenic |
| AGGGCAGAAAGAGCAACCAA+AGG | 0.630670 | 1_3:-65853476 | Msa0134300:CDS |
| ACACTTGTCCCCAAGAACCA+TGG | 0.633615 | 1_3:+65853087 | None:intergenic |
| GTGGAGATAGCAAATGGACA+GGG | 0.635471 | 1_3:-65853141 | Msa0134300:CDS |
| TCAGATGCTGAGTTGTGGAA+TGG | 0.641735 | 1_3:-65852988 | Msa0134300:CDS |
| AATTAGAAACTCCCTGAATG+GGG | 0.642371 | 1_3:+65852618 | None:intergenic |
| ACTTGTCTTCAATTTCCACA+AGG | 0.644732 | 1_3:+65852747 | None:intergenic |
| CACCTGAGAGAATCAATGGA+AGG | 0.646646 | 1_3:-65853197 | Msa0134300:CDS |
| GGATCTTGTTACACACTACG+TGG | 0.674942 | 1_3:-65854004 | None:intergenic |
| CTGAATGGGGATGATAACTG+AGG | 0.683843 | 1_3:+65852631 | None:intergenic |
| AATAGATTTCTATAGTGACA+CGG | 0.707814 | 1_3:-65852897 | Msa0134300:three_prime_UTR |
| TATAGAAATCTATTACACAA+GGG | 0.717921 | 1_3:+65852906 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATCATTATTATTTATTAAA+AGG | + | chr1_3:65853208-65853227 | None:intergenic | 10.0% |
| !! | AAATAATAATGATGAAAATA+TGG | - | chr1_3:65853214-65853233 | Msa0134300:CDS | 10.0% |
| !! | CATCATTATTATTTATTAAA+AGG | + | chr1_3:65853208-65853227 | None:intergenic | 10.0% |
| !! | AAATAATAATGATGAAAATA+TGG | - | chr1_3:65853214-65853233 | Msa0134300:CDS | 10.0% |
| !! | GTTGTTTATATAGACTAAAA+TGG | + | chr1_3:65852528-65852547 | None:intergenic | 20.0% |
| !! | CATTAAGAACTTATAATCAA+TGG | - | chr1_3:65852660-65852679 | Msa0134300:three_prime_UTR | 20.0% |
| !!! | AGTTTTTCATTACATTTATC+AGG | - | chr1_3:65852980-65852999 | Msa0134300:CDS | 20.0% |
| !! | TATAGAAATCTATTACACAA+GGG | + | chr1_3:65853577-65853596 | None:intergenic | 20.0% |
| !! | GTTAATGTTTATAGAATTTG+CGG | - | chr1_3:65853605-65853624 | Msa0134300:intron | 20.0% |
| !! | GAGAATAATAAAAATCTCAA+AGG | + | chr1_3:65853679-65853698 | None:intergenic | 20.0% |
| !! | GTTGTTTATATAGACTAAAA+TGG | + | chr1_3:65852528-65852547 | None:intergenic | 20.0% |
| !! | CATTAAGAACTTATAATCAA+TGG | - | chr1_3:65852660-65852679 | Msa0134300:three_prime_UTR | 20.0% |
| !!! | AGTTTTTCATTACATTTATC+AGG | - | chr1_3:65852980-65852999 | Msa0134300:CDS | 20.0% |
| !! | TATAGAAATCTATTACACAA+GGG | + | chr1_3:65853577-65853596 | None:intergenic | 20.0% |
| !! | GTTAATGTTTATAGAATTTG+CGG | - | chr1_3:65853605-65853624 | Msa0134300:intron | 20.0% |
| !! | GAGAATAATAAAAATCTCAA+AGG | + | chr1_3:65853679-65853698 | None:intergenic | 20.0% |
| ! | TTGTTAAATTGGTTAACTCT+AGG | + | chr1_3:65852742-65852761 | None:intergenic | 25.0% |
| !! | CGAAAACAGATTTAACTTTA+AGG | - | chr1_3:65852839-65852858 | Msa0134300:three_prime_UTR | 25.0% |
| ! | TTTCATTACATTTATCAGGA+AGG | - | chr1_3:65852984-65853003 | Msa0134300:CDS | 25.0% |
| ! | TTCATTACATTTATCAGGAA+GGG | - | chr1_3:65852985-65853004 | Msa0134300:CDS | 25.0% |
| !! | GCTTTTACAGAATATGTTAA+GGG | - | chr1_3:65853546-65853565 | Msa0134300:intron | 25.0% |
| ! | CTATAGAAATCTATTACACA+AGG | + | chr1_3:65853578-65853597 | None:intergenic | 25.0% |
| ! | AATAGATTTCTATAGTGACA+CGG | - | chr1_3:65853583-65853602 | Msa0134300:intron | 25.0% |
| ! | TTATCAAGAGAATTCAATTG+CGG | - | chr1_3:65853702-65853721 | Msa0134300:CDS | 25.0% |
| ! | TTAGATGCAATTGAAATAGA+AGG | - | chr1_3:65853780-65853799 | Msa0134300:CDS | 25.0% |
| ! | ATATGAAAAGTGGAAAGAAA+TGG | - | chr1_3:65853808-65853827 | Msa0134300:exon | 25.0% |
| ! | GTTCAAATTGTATTATCATC+AGG | + | chr1_3:65853958-65853977 | None:intergenic | 25.0% |
| ! | TTGTTAAATTGGTTAACTCT+AGG | + | chr1_3:65852742-65852761 | None:intergenic | 25.0% |
| !! | CGAAAACAGATTTAACTTTA+AGG | - | chr1_3:65852839-65852858 | Msa0134300:three_prime_UTR | 25.0% |
| ! | TTTCATTACATTTATCAGGA+AGG | - | chr1_3:65852984-65853003 | Msa0134300:CDS | 25.0% |
| ! | TTCATTACATTTATCAGGAA+GGG | - | chr1_3:65852985-65853004 | Msa0134300:CDS | 25.0% |
| !! | GCTTTTACAGAATATGTTAA+GGG | - | chr1_3:65853546-65853565 | Msa0134300:intron | 25.0% |
| ! | CTATAGAAATCTATTACACA+AGG | + | chr1_3:65853578-65853597 | None:intergenic | 25.0% |
| ! | AATAGATTTCTATAGTGACA+CGG | - | chr1_3:65853583-65853602 | Msa0134300:intron | 25.0% |
| ! | TTATCAAGAGAATTCAATTG+CGG | - | chr1_3:65853702-65853721 | Msa0134300:CDS | 25.0% |
| ! | TTAGATGCAATTGAAATAGA+AGG | - | chr1_3:65853780-65853799 | Msa0134300:CDS | 25.0% |
| ! | ATATGAAAAGTGGAAAGAAA+TGG | - | chr1_3:65853808-65853827 | Msa0134300:exon | 25.0% |
| ! | GTTCAAATTGTATTATCATC+AGG | + | chr1_3:65853958-65853977 | None:intergenic | 25.0% |
| TAAAATGGAATGCATTGTGA+GGG | + | chr1_3:65852513-65852532 | None:intergenic | 30.0% | |
| !!! | ACAAAGTGTTTTTTGAGGAT+AGG | + | chr1_3:65852632-65852651 | None:intergenic | 30.0% |
| TGCATAATGCAACAAGTTAA+TGG | - | chr1_3:65852895-65852914 | Msa0134300:three_prime_UTR | 30.0% | |
| !! | TCTTTGATTCCATTTTTCCA+AGG | - | chr1_3:65853432-65853451 | Msa0134300:CDS | 30.0% |
| AATGGTAGAATTGCTATGTT+GGG | - | chr1_3:65853510-65853529 | Msa0134300:intron | 30.0% | |
| ! | GGCTTTTACAGAATATGTTA+AGG | - | chr1_3:65853545-65853564 | Msa0134300:intron | 30.0% |
| GAAGGTAAACATATGAAAAG+TGG | - | chr1_3:65853798-65853817 | Msa0134300:CDS | 30.0% | |
| TAATTAGAAACTCCCTGAAT+GGG | + | chr1_3:65853866-65853885 | None:intergenic | 30.0% | |
| TTAATTAGAAACTCCCTGAA+TGG | + | chr1_3:65853867-65853886 | None:intergenic | 30.0% | |
| AGGGAGTTTCTAATTAACAT+AGG | - | chr1_3:65853870-65853889 | Msa0134300:five_prime_UTR | 30.0% | |
| TAAAATGGAATGCATTGTGA+GGG | + | chr1_3:65852513-65852532 | None:intergenic | 30.0% | |
| !!! | ACAAAGTGTTTTTTGAGGAT+AGG | + | chr1_3:65852632-65852651 | None:intergenic | 30.0% |
| TGCATAATGCAACAAGTTAA+TGG | - | chr1_3:65852895-65852914 | Msa0134300:three_prime_UTR | 30.0% | |
| !! | TCTTTGATTCCATTTTTCCA+AGG | - | chr1_3:65853432-65853451 | Msa0134300:CDS | 30.0% |
| AATGGTAGAATTGCTATGTT+GGG | - | chr1_3:65853510-65853529 | Msa0134300:intron | 30.0% | |
| ! | GGCTTTTACAGAATATGTTA+AGG | - | chr1_3:65853545-65853564 | Msa0134300:intron | 30.0% |
| GAAGGTAAACATATGAAAAG+TGG | - | chr1_3:65853798-65853817 | Msa0134300:CDS | 30.0% | |
| TAATTAGAAACTCCCTGAAT+GGG | + | chr1_3:65853866-65853885 | None:intergenic | 30.0% | |
| TTAATTAGAAACTCCCTGAA+TGG | + | chr1_3:65853867-65853886 | None:intergenic | 30.0% | |
| AGGGAGTTTCTAATTAACAT+AGG | - | chr1_3:65853870-65853889 | Msa0134300:five_prime_UTR | 30.0% | |
| ATGCATTGTGAGGGATATTA+TGG | + | chr1_3:65852504-65852523 | None:intergenic | 35.0% | |
| CTAAAATGGAATGCATTGTG+AGG | + | chr1_3:65852514-65852533 | None:intergenic | 35.0% | |
| !!! | AGTGTTTTTTGAGGATAGGA+TGG | + | chr1_3:65852628-65852647 | None:intergenic | 35.0% |
| !!! | CAACGACAAAGTGTTTTTTG+AGG | + | chr1_3:65852637-65852656 | None:intergenic | 35.0% |
| CAGAAGGGATGTTGTTAAAT+TGG | + | chr1_3:65852753-65852772 | None:intergenic | 35.0% | |
| TTTACTACTATGCTCACCTT+TGG | + | chr1_3:65853104-65853123 | None:intergenic | 35.0% | |
| ! | CACAAAGTTTTCGGATTTGA+TGG | - | chr1_3:65853245-65853264 | Msa0134300:intron | 35.0% |
| !! | TTTTCGGATTTGATGGCATT+TGG | - | chr1_3:65853252-65853271 | Msa0134300:intron | 35.0% |
| !!! | ATTGGTTTTGTAGCTGCTAT+GGG | - | chr1_3:65853315-65853334 | Msa0134300:intron | 35.0% |
| GGTCTGTTTGATCAAATATC+TGG | - | chr1_3:65853360-65853379 | Msa0134300:intron | 35.0% | |
| CTGTTTGATCAAATATCTGG+TGG | - | chr1_3:65853363-65853382 | Msa0134300:intron | 35.0% | |
| TTTGATCAAATATCTGGTGG+TGG | - | chr1_3:65853366-65853385 | Msa0134300:intron | 35.0% | |
| ACACTAACACCTTGGAAAAA+TGG | + | chr1_3:65853444-65853463 | None:intergenic | 35.0% | |
| !! | ATTTTTCCAAGGTGTTAGTG+TGG | - | chr1_3:65853443-65853462 | Msa0134300:CDS | 35.0% |
| GAATGGTAGAATTGCTATGT+TGG | - | chr1_3:65853509-65853528 | Msa0134300:intron | 35.0% | |
| TATGTTGGGTTTGATTGCTT+TGG | - | chr1_3:65853524-65853543 | Msa0134300:intron | 35.0% | |
| ! | ATTGCGGAAATTTTTCCTTG+TGG | - | chr1_3:65853718-65853737 | Msa0134300:CDS | 35.0% |
| ACTTGTCTTCAATTTCCACA+AGG | + | chr1_3:65853736-65853755 | None:intergenic | 35.0% | |
| !! | GACAAGTGCAACTTTTAGAA+AGG | - | chr1_3:65853749-65853768 | Msa0134300:CDS | 35.0% |
| AATTAGAAACTCCCTGAATG+GGG | + | chr1_3:65853865-65853884 | None:intergenic | 35.0% | |
| ATGCATTGTGAGGGATATTA+TGG | + | chr1_3:65852504-65852523 | None:intergenic | 35.0% | |
| CTAAAATGGAATGCATTGTG+AGG | + | chr1_3:65852514-65852533 | None:intergenic | 35.0% | |
| !!! | AGTGTTTTTTGAGGATAGGA+TGG | + | chr1_3:65852628-65852647 | None:intergenic | 35.0% |
| !!! | CAACGACAAAGTGTTTTTTG+AGG | + | chr1_3:65852637-65852656 | None:intergenic | 35.0% |
| CAGAAGGGATGTTGTTAAAT+TGG | + | chr1_3:65852753-65852772 | None:intergenic | 35.0% | |
| TTTACTACTATGCTCACCTT+TGG | + | chr1_3:65853104-65853123 | None:intergenic | 35.0% | |
| ! | CACAAAGTTTTCGGATTTGA+TGG | - | chr1_3:65853245-65853264 | Msa0134300:intron | 35.0% |
| !! | TTTTCGGATTTGATGGCATT+TGG | - | chr1_3:65853252-65853271 | Msa0134300:intron | 35.0% |
| !!! | ATTGGTTTTGTAGCTGCTAT+GGG | - | chr1_3:65853315-65853334 | Msa0134300:intron | 35.0% |
| GGTCTGTTTGATCAAATATC+TGG | - | chr1_3:65853360-65853379 | Msa0134300:intron | 35.0% | |
| CTGTTTGATCAAATATCTGG+TGG | - | chr1_3:65853363-65853382 | Msa0134300:intron | 35.0% | |
| TTTGATCAAATATCTGGTGG+TGG | - | chr1_3:65853366-65853385 | Msa0134300:intron | 35.0% | |
| ACACTAACACCTTGGAAAAA+TGG | + | chr1_3:65853444-65853463 | None:intergenic | 35.0% | |
| !! | ATTTTTCCAAGGTGTTAGTG+TGG | - | chr1_3:65853443-65853462 | Msa0134300:CDS | 35.0% |
| GAATGGTAGAATTGCTATGT+TGG | - | chr1_3:65853509-65853528 | Msa0134300:intron | 35.0% | |
| TATGTTGGGTTTGATTGCTT+TGG | - | chr1_3:65853524-65853543 | Msa0134300:intron | 35.0% | |
| ! | ATTGCGGAAATTTTTCCTTG+TGG | - | chr1_3:65853718-65853737 | Msa0134300:CDS | 35.0% |
| ACTTGTCTTCAATTTCCACA+AGG | + | chr1_3:65853736-65853755 | None:intergenic | 35.0% | |
| !! | GACAAGTGCAACTTTTAGAA+AGG | - | chr1_3:65853749-65853768 | Msa0134300:CDS | 35.0% |
| AATTAGAAACTCCCTGAATG+GGG | + | chr1_3:65853865-65853884 | None:intergenic | 35.0% | |
| ! | GGTAGGTATAGCATTGAAGA+TGG | + | chr1_3:65852550-65852569 | None:intergenic | 40.0% |
| ! | CTTAGATGGTTAAGGTTGGT+AGG | + | chr1_3:65852567-65852586 | None:intergenic | 40.0% |
| CTACCAACCTTAACCATCTA+AGG | - | chr1_3:65852565-65852584 | Msa0134300:three_prime_UTR | 40.0% | |
| ACACCTTAGATGGTTAAGGT+TGG | + | chr1_3:65852571-65852590 | None:intergenic | 40.0% | |
| CACTACACCTTAGATGGTTA+AGG | + | chr1_3:65852575-65852594 | None:intergenic | 40.0% | |
| TCACTTCACTACACCTTAGA+TGG | + | chr1_3:65852581-65852600 | None:intergenic | 40.0% | |
| !! | GGATGGCTTTGTAAAACACT+TGG | + | chr1_3:65852611-65852630 | None:intergenic | 40.0% |
| AGCTTGGCATATACACAGAA+GGG | + | chr1_3:65852768-65852787 | None:intergenic | 40.0% | |
| AAGCTTGGCATATACACAGA+AGG | + | chr1_3:65852769-65852788 | None:intergenic | 40.0% | |
| CTAGCATTTCTTCTCAAGCT+TGG | + | chr1_3:65852784-65852803 | None:intergenic | 40.0% | |
| ! | GAAATGCTAGCCTCAAAGTT+CGG | - | chr1_3:65852794-65852813 | Msa0134300:three_prime_UTR | 40.0% |
| TTTGGTGAACGTGTATAGGT+TGG | + | chr1_3:65853086-65853105 | None:intergenic | 40.0% | |
| AACCTATACACGTTCACCAA+AGG | - | chr1_3:65853085-65853104 | Msa0134300:CDS | 40.0% | |
| ! | GCAGATGAGCACAAAGTTTT+CGG | - | chr1_3:65853236-65853255 | Msa0134300:CDS | 40.0% |
| !! | AACCTTCCATTGATTCTCTC+AGG | + | chr1_3:65853288-65853307 | None:intergenic | 40.0% |
| TGAGAGAATCAATGGAAGGT+TGG | - | chr1_3:65853287-65853306 | Msa0134300:intron | 40.0% | |
| ! | AATGGAAGGTTGGCTATGAT+TGG | - | chr1_3:65853297-65853316 | Msa0134300:intron | 40.0% |
| !!! | GATTGGTTTTGTAGCTGCTA+TGG | - | chr1_3:65853314-65853333 | Msa0134300:intron | 40.0% |
| !!! | TTGGTTTTGTAGCTGCTATG+GGG | - | chr1_3:65853316-65853335 | Msa0134300:intron | 40.0% |
| AGTGTGGAGTCTAAGTCAAA+AGG | - | chr1_3:65853459-65853478 | Msa0134300:CDS | 40.0% | |
| TCAGTTATCATCCCCATTCA+GGG | - | chr1_3:65853851-65853870 | Msa0134300:five_prime_UTR | 40.0% | |
| TAATGTGTTGAGCGCTCAAA+TGG | + | chr1_3:65853933-65853952 | None:intergenic | 40.0% | |
| ! | GGTAGGTATAGCATTGAAGA+TGG | + | chr1_3:65852550-65852569 | None:intergenic | 40.0% |
| ! | CTTAGATGGTTAAGGTTGGT+AGG | + | chr1_3:65852567-65852586 | None:intergenic | 40.0% |
| CTACCAACCTTAACCATCTA+AGG | - | chr1_3:65852565-65852584 | Msa0134300:three_prime_UTR | 40.0% | |
| ACACCTTAGATGGTTAAGGT+TGG | + | chr1_3:65852571-65852590 | None:intergenic | 40.0% | |
| CACTACACCTTAGATGGTTA+AGG | + | chr1_3:65852575-65852594 | None:intergenic | 40.0% | |
| TCACTTCACTACACCTTAGA+TGG | + | chr1_3:65852581-65852600 | None:intergenic | 40.0% | |
| !! | GGATGGCTTTGTAAAACACT+TGG | + | chr1_3:65852611-65852630 | None:intergenic | 40.0% |
| AGCTTGGCATATACACAGAA+GGG | + | chr1_3:65852768-65852787 | None:intergenic | 40.0% | |
| AAGCTTGGCATATACACAGA+AGG | + | chr1_3:65852769-65852788 | None:intergenic | 40.0% | |
| CTAGCATTTCTTCTCAAGCT+TGG | + | chr1_3:65852784-65852803 | None:intergenic | 40.0% | |
| ! | GAAATGCTAGCCTCAAAGTT+CGG | - | chr1_3:65852794-65852813 | Msa0134300:three_prime_UTR | 40.0% |
| TTTGGTGAACGTGTATAGGT+TGG | + | chr1_3:65853086-65853105 | None:intergenic | 40.0% | |
| AACCTATACACGTTCACCAA+AGG | - | chr1_3:65853085-65853104 | Msa0134300:CDS | 40.0% | |
| ! | GCAGATGAGCACAAAGTTTT+CGG | - | chr1_3:65853236-65853255 | Msa0134300:CDS | 40.0% |
| !! | AACCTTCCATTGATTCTCTC+AGG | + | chr1_3:65853288-65853307 | None:intergenic | 40.0% |
| TGAGAGAATCAATGGAAGGT+TGG | - | chr1_3:65853287-65853306 | Msa0134300:intron | 40.0% | |
| ! | AATGGAAGGTTGGCTATGAT+TGG | - | chr1_3:65853297-65853316 | Msa0134300:intron | 40.0% |
| !!! | GATTGGTTTTGTAGCTGCTA+TGG | - | chr1_3:65853314-65853333 | Msa0134300:intron | 40.0% |
| !!! | TTGGTTTTGTAGCTGCTATG+GGG | - | chr1_3:65853316-65853335 | Msa0134300:intron | 40.0% |
| AGTGTGGAGTCTAAGTCAAA+AGG | - | chr1_3:65853459-65853478 | Msa0134300:CDS | 40.0% | |
| TCAGTTATCATCCCCATTCA+GGG | - | chr1_3:65853851-65853870 | Msa0134300:five_prime_UTR | 40.0% | |
| TAATGTGTTGAGCGCTCAAA+TGG | + | chr1_3:65853933-65853952 | None:intergenic | 40.0% | |
| CGAAAACATTACCTCAGCCA+TGG | + | chr1_3:65852821-65852840 | None:intergenic | 45.0% | |
| !! | GTGCTGATGGTGGTGTAATT+GGG | + | chr1_3:65853040-65853059 | None:intergenic | 45.0% |
| !! | GTATAGGTTGGTTGTGGTTG+TGG | + | chr1_3:65853074-65853093 | None:intergenic | 45.0% |
| !! | GAACGTGTATAGGTTGGTTG+TGG | + | chr1_3:65853080-65853099 | None:intergenic | 45.0% |
| CACCTTTGGTGAACGTGTAT+AGG | + | chr1_3:65853090-65853109 | None:intergenic | 45.0% | |
| ! | TCGGATTTGATGGCATTTGG+TGG | - | chr1_3:65853255-65853274 | Msa0134300:intron | 45.0% |
| ! | CGGATTTGATGGCATTTGGT+GGG | - | chr1_3:65853256-65853275 | Msa0134300:intron | 45.0% |
| CACCTGAGAGAATCAATGGA+AGG | - | chr1_3:65853283-65853302 | Msa0134300:intron | 45.0% | |
| !!! | TGGTTTTGTAGCTGCTATGG+GGG | - | chr1_3:65853317-65853336 | Msa0134300:intron | 45.0% |
| GTGGAGATAGCAAATGGACA+GGG | - | chr1_3:65853339-65853358 | Msa0134300:intron | 45.0% | |
| !! | TATCTGGTGGTGGAATTCCA+TGG | - | chr1_3:65853376-65853395 | Msa0134300:intron | 45.0% |
| TGGTGGAATTCCATGGTTCT+TGG | - | chr1_3:65853383-65853402 | Msa0134300:intron | 45.0% | |
| GGTGGAATTCCATGGTTCTT+GGG | - | chr1_3:65853384-65853403 | Msa0134300:intron | 45.0% | |
| GTGGAATTCCATGGTTCTTG+GGG | - | chr1_3:65853385-65853404 | Msa0134300:intron | 45.0% | |
| TAGACTCCACACTAACACCT+TGG | + | chr1_3:65853452-65853471 | None:intergenic | 45.0% | |
| ATTCCACAACTCAGCATCTG+AGG | + | chr1_3:65853493-65853512 | None:intergenic | 45.0% | |
| TCAGATGCTGAGTTGTGGAA+TGG | - | chr1_3:65853492-65853511 | Msa0134300:intron | 45.0% | |
| CTGAATGGGGATGATAACTG+AGG | + | chr1_3:65853852-65853871 | None:intergenic | 45.0% | |
| CTCAGTTATCATCCCCATTC+AGG | - | chr1_3:65853850-65853869 | Msa0134300:five_prime_UTR | 45.0% | |
| CGAAAACATTACCTCAGCCA+TGG | + | chr1_3:65852821-65852840 | None:intergenic | 45.0% | |
| !! | GTGCTGATGGTGGTGTAATT+GGG | + | chr1_3:65853040-65853059 | None:intergenic | 45.0% |
| !! | GTATAGGTTGGTTGTGGTTG+TGG | + | chr1_3:65853074-65853093 | None:intergenic | 45.0% |
| !! | GAACGTGTATAGGTTGGTTG+TGG | + | chr1_3:65853080-65853099 | None:intergenic | 45.0% |
| CACCTTTGGTGAACGTGTAT+AGG | + | chr1_3:65853090-65853109 | None:intergenic | 45.0% | |
| ! | TCGGATTTGATGGCATTTGG+TGG | - | chr1_3:65853255-65853274 | Msa0134300:intron | 45.0% |
| ! | CGGATTTGATGGCATTTGGT+GGG | - | chr1_3:65853256-65853275 | Msa0134300:intron | 45.0% |
| CACCTGAGAGAATCAATGGA+AGG | - | chr1_3:65853283-65853302 | Msa0134300:intron | 45.0% | |
| !!! | TGGTTTTGTAGCTGCTATGG+GGG | - | chr1_3:65853317-65853336 | Msa0134300:intron | 45.0% |
| GTGGAGATAGCAAATGGACA+GGG | - | chr1_3:65853339-65853358 | Msa0134300:intron | 45.0% | |
| !! | TATCTGGTGGTGGAATTCCA+TGG | - | chr1_3:65853376-65853395 | Msa0134300:intron | 45.0% |
| TGGTGGAATTCCATGGTTCT+TGG | - | chr1_3:65853383-65853402 | Msa0134300:intron | 45.0% | |
| GGTGGAATTCCATGGTTCTT+GGG | - | chr1_3:65853384-65853403 | Msa0134300:intron | 45.0% | |
| GTGGAATTCCATGGTTCTTG+GGG | - | chr1_3:65853385-65853404 | Msa0134300:intron | 45.0% | |
| TAGACTCCACACTAACACCT+TGG | + | chr1_3:65853452-65853471 | None:intergenic | 45.0% | |
| ATTCCACAACTCAGCATCTG+AGG | + | chr1_3:65853493-65853512 | None:intergenic | 45.0% | |
| TCAGATGCTGAGTTGTGGAA+TGG | - | chr1_3:65853492-65853511 | Msa0134300:intron | 45.0% | |
| CTGAATGGGGATGATAACTG+AGG | + | chr1_3:65853852-65853871 | None:intergenic | 45.0% | |
| CTCAGTTATCATCCCCATTC+AGG | - | chr1_3:65853850-65853869 | Msa0134300:five_prime_UTR | 45.0% | |
| !! | ATCATTATTATTTATTAAAA+GGG | + | chr1_3:65853207-65853226 | None:intergenic | 5.0% |
| !! | ATCATTATTATTTATTAAAA+GGG | + | chr1_3:65853207-65853226 | None:intergenic | 5.0% |
| CCTGCTAGAAATGCTGGTCA+TGG | + | chr1_3:65852719-65852738 | None:intergenic | 50.0% | |
| !! | CCATGACCAGCATTTCTAGC+AGG | - | chr1_3:65852716-65852735 | Msa0134300:three_prime_UTR | 50.0% |
| TCTAGGCCTGCTAGAAATGC+TGG | + | chr1_3:65852725-65852744 | None:intergenic | 50.0% | |
| TAGCCTCAAAGTTCGGTCCA+TGG | - | chr1_3:65852801-65852820 | Msa0134300:three_prime_UTR | 50.0% | |
| AGGGCAGAAAGAGCAACCAA+AGG | - | chr1_3:65853004-65853023 | Msa0134300:CDS | 50.0% | |
| ATTGGGTCTACAGGCACCTT+TGG | + | chr1_3:65853023-65853042 | None:intergenic | 50.0% | |
| GGTGGTGTAATTGGGTCTAC+AGG | + | chr1_3:65853032-65853051 | None:intergenic | 50.0% | |
| !! | GGTGCTGATGGTGGTGTAAT+TGG | + | chr1_3:65853041-65853060 | None:intergenic | 50.0% |
| !! | TAGGTTGGTTGTGGTTGTGG+TGG | + | chr1_3:65853071-65853090 | None:intergenic | 50.0% |
| !! | CCATTGATTCTCTCAGGTGC+TGG | + | chr1_3:65853282-65853301 | None:intergenic | 50.0% |
| CCAGCACCTGAGAGAATCAA+TGG | - | chr1_3:65853279-65853298 | Msa0134300:intron | 50.0% | |
| ! | TTTTGTAGCTGCTATGGGGG+TGG | - | chr1_3:65853320-65853339 | Msa0134300:intron | 50.0% |
| ATGGGGGTGGAGATAGCAAA+TGG | - | chr1_3:65853333-65853352 | Msa0134300:intron | 50.0% | |
| GGTGGAGATAGCAAATGGAC+AGG | - | chr1_3:65853338-65853357 | Msa0134300:intron | 50.0% | |
| ACACTTGTCCCCAAGAACCA+TGG | + | chr1_3:65853396-65853415 | None:intergenic | 50.0% | |
| TGTCCTCAGATGCTGAGTTG+TGG | - | chr1_3:65853487-65853506 | Msa0134300:intron | 50.0% | |
| CCTGCTAGAAATGCTGGTCA+TGG | + | chr1_3:65852719-65852738 | None:intergenic | 50.0% | |
| !! | CCATGACCAGCATTTCTAGC+AGG | - | chr1_3:65852716-65852735 | Msa0134300:three_prime_UTR | 50.0% |
| TCTAGGCCTGCTAGAAATGC+TGG | + | chr1_3:65852725-65852744 | None:intergenic | 50.0% | |
| TAGCCTCAAAGTTCGGTCCA+TGG | - | chr1_3:65852801-65852820 | Msa0134300:three_prime_UTR | 50.0% | |
| AGGGCAGAAAGAGCAACCAA+AGG | - | chr1_3:65853004-65853023 | Msa0134300:CDS | 50.0% | |
| ATTGGGTCTACAGGCACCTT+TGG | + | chr1_3:65853023-65853042 | None:intergenic | 50.0% | |
| GGTGGTGTAATTGGGTCTAC+AGG | + | chr1_3:65853032-65853051 | None:intergenic | 50.0% | |
| !! | GGTGCTGATGGTGGTGTAAT+TGG | + | chr1_3:65853041-65853060 | None:intergenic | 50.0% |
| !! | TAGGTTGGTTGTGGTTGTGG+TGG | + | chr1_3:65853071-65853090 | None:intergenic | 50.0% |
| !! | CCATTGATTCTCTCAGGTGC+TGG | + | chr1_3:65853282-65853301 | None:intergenic | 50.0% |
| CCAGCACCTGAGAGAATCAA+TGG | - | chr1_3:65853279-65853298 | Msa0134300:intron | 50.0% | |
| ! | TTTTGTAGCTGCTATGGGGG+TGG | - | chr1_3:65853320-65853339 | Msa0134300:intron | 50.0% |
| ATGGGGGTGGAGATAGCAAA+TGG | - | chr1_3:65853333-65853352 | Msa0134300:intron | 50.0% | |
| GGTGGAGATAGCAAATGGAC+AGG | - | chr1_3:65853338-65853357 | Msa0134300:intron | 50.0% | |
| ACACTTGTCCCCAAGAACCA+TGG | + | chr1_3:65853396-65853415 | None:intergenic | 50.0% | |
| TGTCCTCAGATGCTGAGTTG+TGG | - | chr1_3:65853487-65853506 | Msa0134300:intron | 50.0% | |
| CAGCCATGGACCGAACTTTG+AGG | + | chr1_3:65852807-65852826 | None:intergenic | 55.0% | |
| CAAAGTTCGGTCCATGGCTG+AGG | - | chr1_3:65852807-65852826 | Msa0134300:three_prime_UTR | 55.0% | |
| !! | TGTGGTTGTGGTGGTGGAGT+TGG | + | chr1_3:65853062-65853081 | None:intergenic | 55.0% |
| GTTGGTTGTGGTTGTGGTGG+TGG | + | chr1_3:65853068-65853087 | None:intergenic | 55.0% | |
| GAGCGCTCAAATGGTTGCAC+AGG | + | chr1_3:65853924-65853943 | None:intergenic | 55.0% | |
| CAGCCATGGACCGAACTTTG+AGG | + | chr1_3:65852807-65852826 | None:intergenic | 55.0% | |
| CAAAGTTCGGTCCATGGCTG+AGG | - | chr1_3:65852807-65852826 | Msa0134300:three_prime_UTR | 55.0% | |
| !! | TGTGGTTGTGGTGGTGGAGT+TGG | + | chr1_3:65853062-65853081 | None:intergenic | 55.0% |
| GTTGGTTGTGGTTGTGGTGG+TGG | + | chr1_3:65853068-65853087 | None:intergenic | 55.0% | |
| GAGCGCTCAAATGGTTGCAC+AGG | + | chr1_3:65853924-65853943 | None:intergenic | 55.0% | |
| !! | GGTGGAGTTGGTGCTGATGG+TGG | + | chr1_3:65853050-65853069 | None:intergenic | 60.0% |
| !! | GGTGGTGGAGTTGGTGCTGA+TGG | + | chr1_3:65853053-65853072 | None:intergenic | 60.0% |
| !! | GGTGGAGTTGGTGCTGATGG+TGG | + | chr1_3:65853050-65853069 | None:intergenic | 60.0% |
| !! | GGTGGTGGAGTTGGTGCTGA+TGG | + | chr1_3:65853053-65853072 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 65852483 | 65854019 | 65852483 | ID=Msa0134300;Name=Msa0134300 |
| chr1_3 | mRNA | 65852483 | 65854019 | 65852483 | ID=Msa0134300-mRNA-1;Parent=Msa0134300;Name=Msa0134300-mRNA-1;_AED=0.00;_eAED=0.00;_QI=196|1|1|1|1|1|3|435|199 |
| chr1_3 | exon | 65852483 | 65853262 | 65852483 | ID=Msa0134300-mRNA-1:exon:22394;Parent=Msa0134300-mRNA-1 |
| chr1_3 | exon | 65853396 | 65853500 | 65853396 | ID=Msa0134300-mRNA-1:exon:22393;Parent=Msa0134300-mRNA-1 |
| chr1_3 | exon | 65853674 | 65854019 | 65853674 | ID=Msa0134300-mRNA-1:exon:22392;Parent=Msa0134300-mRNA-1 |
| chr1_3 | five_prime_UTR | 65853824 | 65854019 | 65853824 | ID=Msa0134300-mRNA-1:five_prime_utr;Parent=Msa0134300-mRNA-1 |
| chr1_3 | CDS | 65853674 | 65853823 | 65853674 | ID=Msa0134300-mRNA-1:cds;Parent=Msa0134300-mRNA-1 |
| chr1_3 | CDS | 65853396 | 65853500 | 65853396 | ID=Msa0134300-mRNA-1:cds;Parent=Msa0134300-mRNA-1 |
| chr1_3 | CDS | 65852918 | 65853262 | 65852918 | ID=Msa0134300-mRNA-1:cds;Parent=Msa0134300-mRNA-1 |
| chr1_3 | three_prime_UTR | 65852483 | 65852917 | 65852483 | ID=Msa0134300-mRNA-1:three_prime_utr;Parent=Msa0134300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
