Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087580 | AAK63815.1 | 98.995 | 199 | 2 | 0 | 1 | 199 | 1 | 199 | 5.26e-138 | 394 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087580 | sp|P11432|ELI_PEA | 80.905 | 199 | 35 | 1 | 1 | 199 | 1 | 196 | 4.82e-105 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087580 | Q94F86 | 98.995 | 199 | 2 | 0 | 1 | 199 | 1 | 199 | 2.51e-138 | 394 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002060 | Msa0087580 | 0.808051 | 3.744645e-50 | -8.615850e-47 |
| Msa0005160 | Msa0087580 | 0.812353 | 4.425721e-51 | -8.615850e-47 |
| Msa0006820 | Msa0087580 | 0.827199 | 1.785211e-54 | -8.615850e-47 |
| Msa0015720 | Msa0087580 | 0.809481 | 1.852249e-50 | -8.615850e-47 |
| Msa0016110 | Msa0087580 | 0.825893 | 3.656478e-54 | -8.615850e-47 |
| Msa0016160 | Msa0087580 | 0.817178 | 3.772779e-52 | -8.615850e-47 |
| Msa0021710 | Msa0087580 | 0.832298 | 1.023834e-55 | -8.615850e-47 |
| Msa0032450 | Msa0087580 | 0.843635 | 1.241392e-58 | -8.615850e-47 |
| Msa0039920 | Msa0087580 | 0.946431 | 4.681184e-105 | -8.615850e-47 |
| Msa0040090 | Msa0087580 | 0.945574 | 2.364441e-104 | -8.615850e-47 |
| Msa0041780 | Msa0087580 | 0.809129 | 2.203590e-50 | -8.615850e-47 |
| Msa0046050 | Msa0087580 | 0.806600 | 7.604161e-50 | -8.615850e-47 |
| Msa0046700 | Msa0087580 | 0.800783 | 1.225472e-48 | -8.615850e-47 |
| Msa0050500 | Msa0087580 | 0.821591 | 3.721699e-53 | -8.615850e-47 |
| Msa0053210 | Msa0087580 | 0.820790 | 5.694497e-53 | -8.615850e-47 |
| Msa0057740 | Msa0087580 | 0.837920 | 3.908573e-57 | -8.615850e-47 |
| Msa0080620 | Msa0087580 | 0.847444 | 1.151754e-59 | -8.615850e-47 |
| Msa0087580 | Msa0087780 | 0.929160 | 1.035302e-92 | -8.615850e-47 |
| Msa0087580 | Msa0087790 | 0.929841 | 3.894056e-93 | -8.615850e-47 |
| Msa0087580 | Msa0096020 | 0.862142 | 6.248530e-64 | -8.615850e-47 |
| Msa0087580 | Msa0096830 | 0.810612 | 1.056968e-50 | -8.615850e-47 |
| Msa0087580 | Msa0098700 | 0.829718 | 4.400890e-55 | -8.615850e-47 |
| Msa0087580 | Msa0100910 | 0.814168 | 1.767044e-51 | -8.615850e-47 |
| Msa0087580 | Msa0103060 | 0.832325 | 1.007997e-55 | -8.615850e-47 |
| Msa0087580 | Msa0109870 | 0.818418 | 1.980820e-52 | -8.615850e-47 |
| Msa0087580 | Msa0116950 | 0.817104 | 3.920871e-52 | -8.615850e-47 |
| Msa0087580 | Msa0133450 | 0.856713 | 2.671117e-62 | -8.615850e-47 |
| Msa0087580 | Msa0134300 | 0.999847 | 0.000000e+00 | -8.615850e-47 |
| Msa0087580 | Msa0134380 | 0.945512 | 2.659809e-104 | -8.615850e-47 |
| Msa0087580 | Msa0134390 | 0.918103 | 2.354708e-86 | -8.615850e-47 |
| Msa0087580 | Msa0134400 | 0.911727 | 4.383312e-83 | -8.615850e-47 |
| Msa0087580 | Msa0134410 | 0.846000 | 2.858718e-59 | -8.615850e-47 |
| Msa0087580 | Msa0134420 | 0.925525 | 1.630497e-90 | -8.615850e-47 |
| Msa0087580 | Msa0137010 | 0.822352 | 2.480206e-53 | -8.615850e-47 |
| Msa0087580 | Msa0156260 | 0.811624 | 6.379250e-51 | -8.615850e-47 |
| Msa0087580 | Msa0160470 | 0.823888 | 1.086902e-53 | -8.615850e-47 |
| Msa0087580 | Msa0168470 | 0.813661 | 2.286406e-51 | -8.615850e-47 |
| Msa0087580 | Msa0175720 | 0.839288 | 1.733647e-57 | -8.615850e-47 |
| Msa0087580 | Msa0180590 | 0.919494 | 4.195248e-87 | -8.615850e-47 |
| Msa0087580 | Msa0180600 | 0.955284 | 4.318803e-113 | -8.615850e-47 |
| Msa0087580 | Msa0180780 | 0.953188 | 4.744857e-111 | -8.615850e-47 |
| Msa0087580 | Msa0186510 | 0.878312 | 3.110672e-69 | -8.615850e-47 |
| Msa0087580 | Msa0197730 | 0.802413 | 5.676765e-49 | -8.615850e-47 |
| Msa0087580 | Msa0210880 | 0.806933 | 6.465846e-50 | -8.615850e-47 |
| Msa0087580 | Msa0216010 | 0.817735 | 2.826150e-52 | -8.615850e-47 |
| Msa0087580 | Msa0229750 | 0.800215 | 1.599872e-48 | -8.615850e-47 |
| Msa0087580 | Msa0230980 | 0.850593 | 1.536489e-60 | -8.615850e-47 |
| Msa0087580 | Msa0238960 | 0.827493 | 1.517445e-54 | -8.615850e-47 |
| Msa0087580 | Msa0243160 | 0.803295 | 3.731379e-49 | -8.615850e-47 |
| Msa0087580 | Msa0246300 | 0.800985 | 1.114475e-48 | -8.615850e-47 |
| Msa0087580 | Msa0270460 | 0.856477 | 3.133426e-62 | -8.615850e-47 |
| Msa0087580 | Msa0276800 | 0.807980 | 3.876467e-50 | -8.615850e-47 |
| Msa0087580 | Msa0290600 | 0.811450 | 6.957823e-51 | -8.615850e-47 |
| Msa0087580 | Msa0293000 | 0.824022 | 1.010709e-53 | -8.615850e-47 |
| Msa0087580 | Msa0297860 | 0.814414 | 1.559317e-51 | -8.615850e-47 |
| Msa0087580 | Msa0301460 | 0.800337 | 1.511415e-48 | -8.615850e-47 |
| Msa0087580 | Msa0309060 | 0.848710 | 5.151490e-60 | -8.615850e-47 |
| Msa0087580 | Msa0316720 | 0.823260 | 1.524001e-53 | -8.615850e-47 |
| Msa0087580 | Msa0317360 | 0.817989 | 2.476858e-52 | -8.615850e-47 |
| Msa0087580 | Msa0335860 | 0.800532 | 1.379004e-48 | -8.615850e-47 |
| Msa0087580 | Msa0348760 | 0.809226 | 2.101257e-50 | -8.615850e-47 |
| Msa0087580 | Msa0364010 | 0.801555 | 8.521823e-49 | -8.615850e-47 |
| Msa0087580 | Msa0369430 | 0.812451 | 4.210928e-51 | -8.615850e-47 |
| Msa0087580 | Msa0373950 | 0.808881 | 2.490345e-50 | -8.615850e-47 |
| Msa0087580 | Msa0377460 | 0.805840 | 1.099105e-49 | -8.615850e-47 |
| Msa0087580 | Msa0378670 | 0.819902 | 9.100811e-53 | -8.615850e-47 |
| Msa0087580 | Msa0378700 | 0.838196 | 3.319202e-57 | -8.615850e-47 |
| Msa0087580 | Msa0385770 | 0.849721 | 2.696394e-60 | -8.615850e-47 |
| Msa0087580 | Msa0391160 | 0.818186 | 2.235393e-52 | -8.615850e-47 |
| Msa0087580 | Msa0393140 | 0.815542 | 8.763756e-52 | -8.615850e-47 |
| Msa0087580 | Msa0419040 | 0.805371 | 1.379011e-49 | -8.615850e-47 |
| Msa0087580 | Msa0423110 | 0.813864 | 2.062926e-51 | -8.615850e-47 |
| Msa0087580 | Msa0426860 | 0.844570 | 6.967151e-59 | -8.615850e-47 |
| Msa0087580 | Msa0426890 | 0.828563 | 8.386257e-55 | -8.615850e-47 |
| Msa0087580 | Msa0428310 | 0.803929 | 2.757389e-49 | -8.615850e-47 |
| Msa0087580 | Msa0428330 | 0.812289 | 4.569522e-51 | -8.615850e-47 |
| Msa0087580 | Msa0430040 | 0.822105 | 2.829926e-53 | -8.615850e-47 |
| Msa0087580 | Msa0431940 | 0.810462 | 1.138837e-50 | -8.615850e-47 |
| Msa0087580 | Msa0433270 | 0.870415 | 1.484484e-66 | -8.615850e-47 |
| Msa0087580 | Msa0437790 | 0.812520 | 4.067767e-51 | -8.615850e-47 |
| Msa0087580 | Msa0443250 | 0.807793 | 4.249678e-50 | -8.615850e-47 |
| Msa0087580 | Msa0456480 | 0.859435 | 4.144122e-63 | -8.615850e-47 |
| Msa0087580 | Msa0463540 | 0.815503 | 8.943399e-52 | -8.615850e-47 |
| Msa0087580 | Msa0469840 | 0.804243 | 2.372242e-49 | -8.615850e-47 |
| Msa0087580 | Msa0474670 | 0.800429 | 1.447059e-48 | -8.615850e-47 |
| Msa0087580 | Msa0481050 | 0.824002 | 1.021653e-53 | -8.615850e-47 |
| Msa0087580 | Msa0500490 | 0.816328 | 5.853089e-52 | -8.615850e-47 |
| Msa0087580 | Msa0510550 | 0.812942 | 3.288372e-51 | -8.615850e-47 |
| Msa0087580 | Msa0511600 | 0.869012 | 4.257505e-66 | -8.615850e-47 |
| Msa0087580 | Msa0517400 | 0.802655 | 5.059969e-49 | -8.615850e-47 |
| Msa0087580 | Msa0519060 | 0.813046 | 3.120446e-51 | -8.615850e-47 |
| Msa0087580 | Msa0520810 | 0.801772 | 7.689186e-49 | -8.615850e-47 |
| Msa0087580 | Msa0521940 | -0.820116 | 8.129725e-53 | -8.615850e-47 |
| Msa0087580 | Msa0534890 | 0.817805 | 2.725617e-52 | -8.615850e-47 |
| Msa0087580 | Msa0549330 | 0.822803 | 1.947873e-53 | -8.615850e-47 |
| Msa0087580 | Msa0558890 | 0.801407 | 9.136392e-49 | -8.615850e-47 |
| Msa0087580 | Msa0561760 | 0.802682 | 4.996771e-49 | -8.615850e-47 |
| Msa0087580 | Msa0568490 | 0.802638 | 5.102539e-49 | -8.615850e-47 |
| Msa0087580 | Msa0580540 | 0.877301 | 7.012224e-69 | -8.615850e-47 |
| Msa0087580 | Msa0581240 | 0.806356 | 8.559140e-50 | -8.615850e-47 |
| Msa0087580 | Msa0595780 | 0.809543 | 1.796232e-50 | -8.615850e-47 |
| Msa0087580 | Msa0604640 | 0.811206 | 7.863417e-51 | -8.615850e-47 |
| Msa0087580 | Msa0615850 | 0.828084 | 1.094199e-54 | -8.615850e-47 |
| Msa0087580 | Msa0617120 | 0.849541 | 3.027405e-60 | -8.615850e-47 |
| Msa0087580 | Msa0620750 | 0.802780 | 4.769514e-49 | -8.615850e-47 |
| Msa0087580 | Msa0621780 | 0.873813 | 1.098938e-67 | -8.615850e-47 |
| Msa0087580 | Msa0630850 | 0.801476 | 8.842972e-49 | -8.615850e-47 |
| Msa0087580 | Msa0631340 | 0.806982 | 6.313340e-50 | -8.615850e-47 |
| Msa0087580 | Msa0638040 | 0.806917 | 6.515183e-50 | -8.615850e-47 |
| Msa0087580 | Msa0667680 | 0.803921 | 2.766882e-49 | -8.615850e-47 |
| Msa0087580 | Msa0669710 | 0.811546 | 6.632337e-51 | -8.615850e-47 |
| Msa0087580 | Msa0669750 | 0.812511 | 4.085899e-51 | -8.615850e-47 |
| Msa0087580 | Msa0677250 | 0.817618 | 3.004286e-52 | -8.615850e-47 |
| Msa0087580 | Msa0691100 | 0.801547 | 8.553397e-49 | -8.615850e-47 |
| Msa0087580 | Msa0698900 | 0.835750 | 1.399221e-56 | -8.615850e-47 |
| Msa0087580 | Msa0704780 | 0.817615 | 3.007782e-52 | -8.615850e-47 |
| Msa0087580 | Msa0705130 | 0.817875 | 2.628386e-52 | -8.615850e-47 |
| Msa0087580 | Msa0712670 | 0.829163 | 6.002712e-55 | -8.615850e-47 |
| Msa0087580 | Msa0736930 | 0.811893 | 5.574650e-51 | -8.615850e-47 |
| Msa0087580 | Msa0739610 | 0.811802 | 5.835287e-51 | -8.615850e-47 |
| Msa0087580 | Msa0747900 | 0.810435 | 1.154638e-50 | -8.615850e-47 |
| Msa0087580 | Msa0748980 | 0.816025 | 6.838415e-52 | -8.615850e-47 |
| Msa0087580 | Msa0752830 | 0.823755 | 1.167879e-53 | -8.615850e-47 |
| Msa0087580 | Msa0754350 | 0.873099 | 1.911955e-67 | -8.615850e-47 |
| Msa0087580 | Msa0754790 | 0.845999 | 2.860093e-59 | -8.615850e-47 |
| Msa0087580 | Msa0754840 | 0.854096 | 1.544850e-61 | -8.615850e-47 |
| Msa0087580 | Msa0756440 | 0.826373 | 2.810810e-54 | -8.615850e-47 |
| Msa0087580 | Msa0763350 | 0.820046 | 8.436304e-53 | -8.615850e-47 |
| Msa0087580 | Msa0766880 | 0.801261 | 9.788436e-49 | -8.615850e-47 |
| Msa0087580 | Msa0776290 | 0.811141 | 8.121829e-51 | -8.615850e-47 |
| Msa0087580 | Msa0776590 | 0.852298 | 5.059125e-61 | -8.615850e-47 |
| Msa0087580 | Msa0793060 | 0.802963 | 4.370611e-49 | -8.615850e-47 |
| Msa0087580 | Msa0795710 | 0.873026 | 2.022514e-67 | -8.615850e-47 |
| Msa0087580 | Msa0813630 | 0.800994 | 1.110030e-48 | -8.615850e-47 |
| Msa0087580 | Msa0822370 | 0.810943 | 8.965694e-51 | -8.615850e-47 |
| Msa0087580 | Msa0825520 | 0.823497 | 1.341643e-53 | -8.615850e-47 |
| Msa0087580 | Msa0825960 | 0.808382 | 3.184052e-50 | -8.615850e-47 |
| Msa0087580 | Msa0828810 | 0.823204 | 1.571041e-53 | -8.615850e-47 |
| Msa0087580 | Msa0833450 | 0.845411 | 4.130110e-59 | -8.615850e-47 |
| Msa0087580 | Msa0833910 | 0.821783 | 3.359577e-53 | -8.615850e-47 |
| Msa0087580 | Msa0834160 | 0.824162 | 9.370762e-54 | -8.615850e-47 |
| Msa0087580 | Msa0835550 | 0.813876 | 2.049780e-51 | -8.615850e-47 |
| Msa0087580 | Msa0848860 | 0.810873 | 9.281235e-51 | -8.615850e-47 |
| Msa0087580 | Msa0854190 | 0.831673 | 1.461143e-55 | -8.615850e-47 |
| Msa0087580 | Msa0864730 | 0.824261 | 8.885097e-54 | -8.615850e-47 |
| Msa0087580 | Msa0864750 | 0.820433 | 6.875656e-53 | -8.615850e-47 |
| Msa0087580 | Msa0866510 | 0.841711 | 4.025916e-58 | -8.615850e-47 |
| Msa0087580 | Msa0899080 | 0.829095 | 6.234219e-55 | -8.615850e-47 |
| Msa0087580 | Msa0899730 | 0.823226 | 1.552128e-53 | -8.615850e-47 |
| Msa0087580 | Msa0913120 | 0.813660 | 2.287152e-51 | -8.615850e-47 |
| Msa0087580 | Msa0927190 | 0.807221 | 5.619092e-50 | -8.615850e-47 |
| Msa0087580 | Msa0927890 | 0.809346 | 1.980546e-50 | -8.615850e-47 |
| Msa0087580 | Msa0930950 | 0.831593 | 1.528392e-55 | -8.615850e-47 |
| Msa0087580 | Msa0950410 | 0.812789 | 3.552990e-51 | -8.615850e-47 |
| Msa0087580 | Msa0964650 | 0.819727 | 9.978651e-53 | -8.615850e-47 |
| Msa0087580 | Msa0966410 | 0.813086 | 3.058473e-51 | -8.615850e-47 |
| Msa0087580 | Msa0967260 | 0.802936 | 4.427288e-49 | -8.615850e-47 |
| Msa0087580 | Msa0986620 | 0.800124 | 1.669992e-48 | -8.615850e-47 |
| Msa0087580 | Msa0999480 | 0.835572 | 1.552050e-56 | -8.615850e-47 |
| Msa0087580 | Msa1019220 | -0.809973 | 1.451626e-50 | -8.615850e-47 |
| Msa0087580 | Msa1019230 | -0.806730 | 7.139247e-50 | -8.615850e-47 |
| Msa0087580 | Msa1019370 | 0.822780 | 1.972063e-53 | -8.615850e-47 |
| Msa0087580 | Msa1036020 | -0.809097 | 2.239480e-50 | -8.615850e-47 |
| Msa0087580 | Msa1040390 | 0.803594 | 3.235905e-49 | -8.615850e-47 |
| Msa0087580 | Msa1057320 | 0.809311 | 2.014866e-50 | -8.615850e-47 |
| Msa0087580 | Msa1057340 | 0.831344 | 1.760193e-55 | -8.615850e-47 |
| Msa0087580 | Msa1067910 | 0.808357 | 3.222517e-50 | -8.615850e-47 |
| Msa0087580 | Msa1069440 | 0.800356 | 1.497501e-48 | -8.615850e-47 |
| Msa0087580 | Msa1083140 | 0.819349 | 1.217099e-52 | -8.615850e-47 |
| Msa0087580 | Msa1102200 | 0.821582 | 3.739212e-53 | -8.615850e-47 |
| Msa0087580 | Msa1121580 | 0.815283 | 1.000879e-51 | -8.615850e-47 |
| Msa0087580 | Msa1124440 | 0.811598 | 6.461946e-51 | -8.615850e-47 |
| Msa0087580 | Msa1127900 | 0.825454 | 4.647675e-54 | -8.615850e-47 |
| Msa0087580 | Msa1130660 | 0.808341 | 3.248536e-50 | -8.615850e-47 |
| Msa0087580 | Msa1132540 | 0.802113 | 6.543087e-49 | -8.615850e-47 |
| Msa0087580 | Msa1133440 | 0.823396 | 1.416445e-53 | -8.615850e-47 |
| Msa0087580 | Msa1138600 | 0.807105 | 5.947356e-50 | -8.615850e-47 |
| Msa0087580 | Msa1147870 | 0.802985 | 4.325572e-49 | -8.615850e-47 |
| Msa0087580 | Msa1165810 | 0.829030 | 6.464798e-55 | -8.615850e-47 |
| Msa0087580 | Msa1173410 | 0.810891 | 9.201425e-51 | -8.615850e-47 |
| Msa0087580 | Msa1187810 | 0.837373 | 5.402073e-57 | -8.615850e-47 |
| Msa0087580 | Msa1190320 | 0.806566 | 7.731817e-50 | -8.615850e-47 |
| Msa0087580 | Msa1195860 | 0.833296 | 5.785825e-56 | -8.615850e-47 |
| Msa0087580 | Msa1203840 | 0.821537 | 3.830524e-53 | -8.615850e-47 |
| Msa0087580 | Msa1203860 | 0.852381 | 4.790746e-61 | -8.615850e-47 |
| Msa0087580 | Msa1209240 | 0.823091 | 1.669563e-53 | -8.615850e-47 |
| Msa0087580 | Msa1215540 | 0.813379 | 2.637616e-51 | -8.615850e-47 |
| Msa0087580 | Msa1218720 | 0.808575 | 2.895428e-50 | -8.615850e-47 |
| Msa0087580 | Msa1219060 | 0.816725 | 4.769905e-52 | -8.615850e-47 |
| Msa0087580 | Msa1220680 | 0.801062 | 1.074928e-48 | -8.615850e-47 |
| Msa0087580 | Msa1220740 | 0.814198 | 1.741087e-51 | -8.615850e-47 |
| Msa0087580 | Msa1242010 | 0.803011 | 4.273369e-49 | -8.615850e-47 |
| Msa0087580 | Msa1242990 | 0.810328 | 1.217129e-50 | -8.615850e-47 |
| Msa0087580 | Msa1243630 | 0.828244 | 1.001259e-54 | -8.615850e-47 |
| Msa0087580 | Msa1244220 | 0.831289 | 1.816324e-55 | -8.615850e-47 |
| Msa0087580 | Msa1244660 | 0.821567 | 3.769407e-53 | -8.615850e-47 |
| Msa0087580 | Msa1248400 | 0.802040 | 6.775809e-49 | -8.615850e-47 |
| Msa0087580 | Msa1258020 | -0.809228 | 2.099295e-50 | -8.615850e-47 |
| Msa0087580 | Msa1258100 | 0.802529 | 5.371912e-49 | -8.615850e-47 |
| Msa0087580 | Msa1263590 | 0.800227 | 1.591395e-48 | -8.615850e-47 |
| Msa0087580 | Msa1283120 | 0.863526 | 2.338561e-64 | -8.615850e-47 |
| Msa0087580 | Msa1286910 | 0.827856 | 1.241347e-54 | -8.615850e-47 |
| Msa0087580 | Msa1296270 | 0.819336 | 1.225170e-52 | -8.615850e-47 |
| Msa0087580 | Msa1327040 | 0.839136 | 1.898044e-57 | -8.615850e-47 |
| Msa0087580 | Msa1330910 | 0.834873 | 2.329871e-56 | -8.615850e-47 |
| Msa0087580 | Msa1332690 | 0.803226 | 3.856718e-49 | -8.615850e-47 |
| Msa0087580 | Msa1334650 | 0.812588 | 3.932050e-51 | -8.615850e-47 |
| Msa0087580 | Msa1335210 | 0.807084 | 6.007296e-50 | -8.615850e-47 |
| Msa0087580 | Msa1348330 | -0.837515 | 4.967597e-57 | -8.615850e-47 |
| Msa0087580 | Msa1349640 | 0.807327 | 5.335269e-50 | -8.615850e-47 |
| Msa0087580 | Msa1349850 | 0.840962 | 6.337273e-58 | -8.615850e-47 |
| Msa0087580 | Msa1356730 | 0.806409 | 8.344399e-50 | -8.615850e-47 |
| Msa0087580 | Msa1358790 | 0.816576 | 5.150216e-52 | -8.615850e-47 |
| Msa0087580 | Msa1364520 | 0.818573 | 1.827029e-52 | -8.615850e-47 |
| Msa0087580 | Msa1364850 | 0.870318 | 1.597678e-66 | -8.615850e-47 |
| Msa0087580 | Msa1365210 | 0.824715 | 6.945727e-54 | -8.615850e-47 |
| Msa0087580 | Msa1368660 | 0.801936 | 7.116191e-49 | -8.615850e-47 |
| Msa0087580 | Msa1369390 | 0.802651 | 5.071701e-49 | -8.615850e-47 |
| Msa0087580 | Msa1373390 | 0.800699 | 1.274817e-48 | -8.615850e-47 |
| Msa0087580 | Msa1384620 | 0.821825 | 3.285147e-53 | -8.615850e-47 |
| Msa0087580 | Msa1388070 | 0.811671 | 6.229893e-51 | -8.615850e-47 |
| Msa0087580 | Msa1388520 | 0.821496 | 3.915672e-53 | -8.615850e-47 |
| Msa0087580 | Msa1395580 | 0.804186 | 2.437640e-49 | -8.615850e-47 |
| Msa0087580 | Msa1397040 | 0.800720 | 1.262287e-48 | -8.615850e-47 |
| Msa0087580 | Msa1401650 | -0.808418 | 3.128220e-50 | -8.615850e-47 |
| Msa0087580 | Msa1403950 | 0.866642 | 2.456227e-65 | -8.615850e-47 |
| Msa0087580 | Msa1404810 | 0.812022 | 5.225471e-51 | -8.615850e-47 |
| Msa0087580 | Msa1413220 | 0.808528 | 2.962367e-50 | -8.615850e-47 |
| Msa0087580 | Msa1413900 | 0.805191 | 1.503462e-49 | -8.615850e-47 |
| Msa0087580 | Msa1420600 | 0.803206 | 3.893945e-49 | -8.615850e-47 |
| Msa0087580 | Msa1430630 | 0.815516 | 8.880271e-52 | -8.615850e-47 |
| Msa0087580 | Msa1435690 | 0.875267 | 3.526432e-68 | -8.615850e-47 |
| Msa0087580 | Msa1451690 | 0.872220 | 3.758035e-67 | -8.615850e-47 |
| Msa0087580 | Msa1452200 | 0.807052 | 6.101887e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087580 | MtrunA17_Chr1g0204671 | 97.000 | 200 | 5 | 1 | 1 | 199 | 1 | 200 | 1.78e-138 | 385 |
| Msa0087580 | MtrunA17_Chr1g0204681 | 91.960 | 199 | 14 | 1 | 1 | 199 | 1 | 197 | 4.20e-110 | 313 |
| Msa0087580 | MtrunA17_Chr1g0204521 | 88.333 | 180 | 19 | 1 | 20 | 199 | 21 | 198 | 3.57e-109 | 310 |
| Msa0087580 | MtrunA17_Chr1g0204721 | 81.667 | 180 | 19 | 2 | 20 | 199 | 21 | 186 | 1.98e-101 | 290 |
| Msa0087580 | MtrunA17_Chr1g0204691 | 78.142 | 183 | 26 | 2 | 17 | 199 | 14 | 182 | 1.34e-98 | 283 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087580 | AT3G22840.1 | 53.731 | 201 | 85 | 4 | 1 | 199 | 1 | 195 | 2.83e-62 | 192 |
| Msa0087580 | AT4G14690.1 | 50.990 | 202 | 87 | 4 | 1 | 199 | 1 | 193 | 9.11e-57 | 178 |
Find 86 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAAGGGATGTTGTTAAAT+TGG | 0.214729 | 1_2:+68564498 | None:intergenic |
| CTCAGTTATCATCCCCATTC+AGG | 0.237476 | 1_2:-68563398 | Msa0087580:three_prime_UTR |
| GGTGCTGATGGTGGTGTAAT+TGG | 0.245963 | 1_2:+68564210 | None:intergenic |
| TCACTTCACTACACCTTAGA+TGG | 0.287308 | 1_2:+68564670 | None:intergenic |
| TGGTGGAATTCCATGGTTCT+TGG | 0.288858 | 1_2:-68563865 | Msa0087580:CDS |
| GTTGTTTATATAGACTAAAA+TGG | 0.292529 | 1_2:+68564723 | None:intergenic |
| GGTGGAATTCCATGGTTCTT+GGG | 0.299911 | 1_2:-68563864 | Msa0087580:CDS |
| CTACCAACCTTAACCATCTA+AGG | 0.316626 | 1_2:-68564683 | Msa0087580:five_prime_UTR |
| ATGCATTGTGAGGGATATTA+TGG | 0.340683 | 1_2:+68564747 | None:intergenic |
| GTTGGTTGTGGTTGTGGTGG+TGG | 0.344690 | 1_2:+68564183 | None:intergenic |
| TGTGGTTGTGGTGGTGGAGT+TGG | 0.352890 | 1_2:+68564189 | None:intergenic |
| ATTGGGTCTACAGGCACCTT+TGG | 0.360861 | 1_2:+68564228 | None:intergenic |
| CACTACACCTTAGATGGTTA+AGG | 0.368917 | 1_2:+68564676 | None:intergenic |
| TATGTTGGGTTTGATTGCTT+TGG | 0.370659 | 1_2:-68563724 | Msa0087580:CDS |
| AATGGAAGGTTGGCTATGAT+TGG | 0.393839 | 1_2:-68563951 | Msa0087580:CDS |
| GGTCTGTTTGATCAAATATC+TGG | 0.404965 | 1_2:-68563888 | Msa0087580:CDS |
| CCATTGATTCTCTCAGGTGC+TGG | 0.411549 | 1_2:+68563969 | None:intergenic |
| GGTGGTGGAGTTGGTGCTGA+TGG | 0.417357 | 1_2:+68564198 | None:intergenic |
| TTAGATGCAATTGAAATAGA+AGG | 0.427654 | 1_2:-68563468 | Msa0087580:three_prime_UTR |
| AACCTTCCATTGATTCTCTC+AGG | 0.436061 | 1_2:+68563963 | None:intergenic |
| TAATTAGAAACTCCCTGAAT+GGG | 0.439145 | 1_2:+68563385 | None:intergenic |
| GTGCTGATGGTGGTGTAATT+GGG | 0.440700 | 1_2:+68564211 | None:intergenic |
| ATATGAAAAGTGGAAAGAAA+TGG | 0.440968 | 1_2:-68563440 | Msa0087580:three_prime_UTR |
| GTTAATGTTTATAGAATTTG+CGG | 0.445036 | 1_2:-68563643 | Msa0087580:three_prime_UTR |
| GTTCAAATTGTATTATCATC+AGG | 0.447050 | 1_2:+68563293 | None:intergenic |
| GTATAGGTTGGTTGTGGTTG+TGG | 0.448474 | 1_2:+68564177 | None:intergenic |
| GAATGGTAGAATTGCTATGT+TGG | 0.450278 | 1_2:-68563739 | Msa0087580:CDS |
| CTAGCATTTCTTCTCAAGCT+TGG | 0.450671 | 1_2:+68564467 | None:intergenic |
| GAAGGTAAACATATGAAAAG+TGG | 0.450859 | 1_2:-68563450 | Msa0087580:three_prime_UTR |
| CACCTTTGGTGAACGTGTAT+AGG | 0.459386 | 1_2:+68564161 | None:intergenic |
| TTGTTAAATTGGTTAACTCT+AGG | 0.463045 | 1_2:+68564509 | None:intergenic |
| GTGGAATTCCATGGTTCTTG+GGG | 0.468120 | 1_2:-68563863 | Msa0087580:CDS |
| GGTGGAGTTGGTGCTGATGG+TGG | 0.468618 | 1_2:+68564201 | None:intergenic |
| TTAATTAGAAACTCCCTGAA+TGG | 0.471482 | 1_2:+68563384 | None:intergenic |
| CATTAAGAACTTATAATCAA+TGG | 0.480276 | 1_2:-68564588 | Msa0087580:exon |
| CGGATTTGATGGCATTTGGT+GGG | 0.485102 | 1_2:-68563992 | Msa0087580:CDS |
| TCGGATTTGATGGCATTTGG+TGG | 0.487791 | 1_2:-68563993 | Msa0087580:CDS |
| GAAATGCTAGCCTCAAAGTT+CGG | 0.488413 | 1_2:-68564454 | Msa0087580:CDS |
| GGTAGGTATAGCATTGAAGA+TGG | 0.490124 | 1_2:+68564701 | None:intergenic |
| AATGGTAGAATTGCTATGTT+GGG | 0.492247 | 1_2:-68563738 | Msa0087580:CDS |
| AGGGAGTTTCTAATTAACAT+AGG | 0.494734 | 1_2:-68563378 | Msa0087580:three_prime_UTR |
| TCAGTTATCATCCCCATTCA+GGG | 0.498313 | 1_2:-68563397 | Msa0087580:three_prime_UTR |
| TCTAGGCCTGCTAGAAATGC+TGG | 0.515845 | 1_2:+68564526 | None:intergenic |
| GGTGGTGTAATTGGGTCTAC+AGG | 0.516474 | 1_2:+68564219 | None:intergenic |
| CCAGCACCTGAGAGAATCAA+TGG | 0.516939 | 1_2:-68563969 | Msa0087580:CDS |
| TAGGTTGGTTGTGGTTGTGG+TGG | 0.520190 | 1_2:+68564180 | None:intergenic |
| AGTGTGGAGTCTAAGTCAAA+AGG | 0.525000 | 1_2:-68563789 | Msa0087580:CDS |
| TAATGTGTTGAGCGCTCAAA+TGG | 0.525410 | 1_2:+68563318 | None:intergenic |
| CAGCCATGGACCGAACTTTG+AGG | 0.527132 | 1_2:+68564444 | None:intergenic |
| CGAAAACATTACCTCAGCCA+TGG | 0.528935 | 1_2:+68564430 | None:intergenic |
| CAAAGTTCGGTCCATGGCTG+AGG | 0.533870 | 1_2:-68564441 | Msa0087580:intron |
| GGATGGCTTTGTAAAACACT+TGG | 0.536418 | 1_2:+68564640 | None:intergenic |
| GGTGGAGATAGCAAATGGAC+AGG | 0.537366 | 1_2:-68563910 | Msa0087580:CDS |
| GAGCGCTCAAATGGTTGCAC+AGG | 0.540127 | 1_2:+68563327 | None:intergenic |
| CCATGACCAGCATTTCTAGC+AGG | 0.549312 | 1_2:-68564532 | Msa0087580:CDS |
| CCTGCTAGAAATGCTGGTCA+TGG | 0.550870 | 1_2:+68564532 | None:intergenic |
| CTTAGATGGTTAAGGTTGGT+AGG | 0.553528 | 1_2:+68564684 | None:intergenic |
| GAACGTGTATAGGTTGGTTG+TGG | 0.557227 | 1_2:+68564171 | None:intergenic |
| TGAGAGAATCAATGGAAGGT+TGG | 0.560259 | 1_2:-68563961 | Msa0087580:CDS |
| TAGCCTCAAAGTTCGGTCCA+TGG | 0.581082 | 1_2:-68564447 | Msa0087580:CDS |
| AAGCTTGGCATATACACAGA+AGG | 0.589450 | 1_2:+68564482 | None:intergenic |
| CTATAGAAATCTATTACACA+AGG | 0.595515 | 1_2:+68563673 | None:intergenic |
| TAGACTCCACACTAACACCT+TGG | 0.597870 | 1_2:+68563799 | None:intergenic |
| AACCTATACACGTTCACCAA+AGG | 0.599727 | 1_2:-68564163 | Msa0087580:intron |
| TGTCCTCAGATGCTGAGTTG+TGG | 0.599794 | 1_2:-68563761 | Msa0087580:CDS |
| TTATCAAGAGAATTCAATTG+CGG | 0.603450 | 1_2:-68563546 | Msa0087580:three_prime_UTR |
| ATTCCACAACTCAGCATCTG+AGG | 0.606044 | 1_2:+68563758 | None:intergenic |
| TAAAATGGAATGCATTGTGA+GGG | 0.612817 | 1_2:+68564738 | None:intergenic |
| TTTGATCAAATATCTGGTGG+TGG | 0.612951 | 1_2:-68563882 | Msa0087580:CDS |
| TTTGGTGAACGTGTATAGGT+TGG | 0.617927 | 1_2:+68564165 | None:intergenic |
| CTAAAATGGAATGCATTGTG+AGG | 0.619896 | 1_2:+68564737 | None:intergenic |
| AGCTTGGCATATACACAGAA+GGG | 0.622653 | 1_2:+68564483 | None:intergenic |
| TATCTGGTGGTGGAATTCCA+TGG | 0.624337 | 1_2:-68563872 | Msa0087580:CDS |
| CTGTTTGATCAAATATCTGG+TGG | 0.626873 | 1_2:-68563885 | Msa0087580:CDS |
| ACACCTTAGATGGTTAAGGT+TGG | 0.627193 | 1_2:+68564680 | None:intergenic |
| AGGGCAGAAAGAGCAACCAA+AGG | 0.630670 | 1_2:-68564244 | Msa0087580:CDS |
| ACACTTGTCCCCAAGAACCA+TGG | 0.633615 | 1_2:+68563855 | None:intergenic |
| GTGGAGATAGCAAATGGACA+GGG | 0.635471 | 1_2:-68563909 | Msa0087580:CDS |
| TCAGATGCTGAGTTGTGGAA+TGG | 0.641735 | 1_2:-68563756 | Msa0087580:CDS |
| AATTAGAAACTCCCTGAATG+GGG | 0.642371 | 1_2:+68563386 | None:intergenic |
| ACTTGTCTTCAATTTCCACA+AGG | 0.644732 | 1_2:+68563515 | None:intergenic |
| CACCTGAGAGAATCAATGGA+AGG | 0.646646 | 1_2:-68563965 | Msa0087580:CDS |
| GGATCTTGTTACACACTACG+TGG | 0.674942 | 1_2:-68564772 | None:intergenic |
| CTGAATGGGGATGATAACTG+AGG | 0.683843 | 1_2:+68563399 | None:intergenic |
| AATAGATTTCTATAGTGACA+CGG | 0.707814 | 1_2:-68563665 | Msa0087580:three_prime_UTR |
| TATAGAAATCTATTACACAA+GGG | 0.717921 | 1_2:+68563674 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATCATTATTATTTATTAAA+AGG | + | chr1_2:68563976-68563995 | None:intergenic | 10.0% |
| !! | AAATAATAATGATGAAAATA+TGG | - | chr1_2:68563982-68564001 | Msa0087580:CDS | 10.0% |
| !! | CATCATTATTATTTATTAAA+AGG | + | chr1_2:68563976-68563995 | None:intergenic | 10.0% |
| !! | AAATAATAATGATGAAAATA+TGG | - | chr1_2:68563982-68564001 | Msa0087580:CDS | 10.0% |
| !! | GTTGTTTATATAGACTAAAA+TGG | + | chr1_2:68563296-68563315 | None:intergenic | 20.0% |
| !! | CATTAAGAACTTATAATCAA+TGG | - | chr1_2:68563428-68563447 | Msa0087580:three_prime_UTR | 20.0% |
| !!! | AGTTTTTCATTACATTTATC+AGG | - | chr1_2:68563748-68563767 | Msa0087580:CDS | 20.0% |
| !! | TATAGAAATCTATTACACAA+GGG | + | chr1_2:68564345-68564364 | None:intergenic | 20.0% |
| !! | GTTAATGTTTATAGAATTTG+CGG | - | chr1_2:68564373-68564392 | Msa0087580:intron | 20.0% |
| !! | GAGAATAATAAAAATCTCAA+AGG | + | chr1_2:68564447-68564466 | None:intergenic | 20.0% |
| !! | GTTGTTTATATAGACTAAAA+TGG | + | chr1_2:68563296-68563315 | None:intergenic | 20.0% |
| !! | CATTAAGAACTTATAATCAA+TGG | - | chr1_2:68563428-68563447 | Msa0087580:three_prime_UTR | 20.0% |
| !!! | AGTTTTTCATTACATTTATC+AGG | - | chr1_2:68563748-68563767 | Msa0087580:CDS | 20.0% |
| !! | TATAGAAATCTATTACACAA+GGG | + | chr1_2:68564345-68564364 | None:intergenic | 20.0% |
| !! | GTTAATGTTTATAGAATTTG+CGG | - | chr1_2:68564373-68564392 | Msa0087580:intron | 20.0% |
| !! | GAGAATAATAAAAATCTCAA+AGG | + | chr1_2:68564447-68564466 | None:intergenic | 20.0% |
| ! | TTGTTAAATTGGTTAACTCT+AGG | + | chr1_2:68563510-68563529 | None:intergenic | 25.0% |
| !! | CGAAAACAGATTTAACTTTA+AGG | - | chr1_2:68563607-68563626 | Msa0087580:three_prime_UTR | 25.0% |
| ! | TTTCATTACATTTATCAGGA+AGG | - | chr1_2:68563752-68563771 | Msa0087580:CDS | 25.0% |
| ! | TTCATTACATTTATCAGGAA+GGG | - | chr1_2:68563753-68563772 | Msa0087580:CDS | 25.0% |
| !! | GCTTTTACAGAATATGTTAA+GGG | - | chr1_2:68564314-68564333 | Msa0087580:intron | 25.0% |
| ! | CTATAGAAATCTATTACACA+AGG | + | chr1_2:68564346-68564365 | None:intergenic | 25.0% |
| ! | AATAGATTTCTATAGTGACA+CGG | - | chr1_2:68564351-68564370 | Msa0087580:intron | 25.0% |
| ! | TTATCAAGAGAATTCAATTG+CGG | - | chr1_2:68564470-68564489 | Msa0087580:CDS | 25.0% |
| ! | TTAGATGCAATTGAAATAGA+AGG | - | chr1_2:68564548-68564567 | Msa0087580:CDS | 25.0% |
| ! | ATATGAAAAGTGGAAAGAAA+TGG | - | chr1_2:68564576-68564595 | Msa0087580:exon | 25.0% |
| ! | GTTCAAATTGTATTATCATC+AGG | + | chr1_2:68564726-68564745 | None:intergenic | 25.0% |
| ! | TTGTTAAATTGGTTAACTCT+AGG | + | chr1_2:68563510-68563529 | None:intergenic | 25.0% |
| !! | CGAAAACAGATTTAACTTTA+AGG | - | chr1_2:68563607-68563626 | Msa0087580:three_prime_UTR | 25.0% |
| ! | TTTCATTACATTTATCAGGA+AGG | - | chr1_2:68563752-68563771 | Msa0087580:CDS | 25.0% |
| ! | TTCATTACATTTATCAGGAA+GGG | - | chr1_2:68563753-68563772 | Msa0087580:CDS | 25.0% |
| !! | GCTTTTACAGAATATGTTAA+GGG | - | chr1_2:68564314-68564333 | Msa0087580:intron | 25.0% |
| ! | CTATAGAAATCTATTACACA+AGG | + | chr1_2:68564346-68564365 | None:intergenic | 25.0% |
| ! | AATAGATTTCTATAGTGACA+CGG | - | chr1_2:68564351-68564370 | Msa0087580:intron | 25.0% |
| ! | TTATCAAGAGAATTCAATTG+CGG | - | chr1_2:68564470-68564489 | Msa0087580:CDS | 25.0% |
| ! | TTAGATGCAATTGAAATAGA+AGG | - | chr1_2:68564548-68564567 | Msa0087580:CDS | 25.0% |
| ! | ATATGAAAAGTGGAAAGAAA+TGG | - | chr1_2:68564576-68564595 | Msa0087580:exon | 25.0% |
| ! | GTTCAAATTGTATTATCATC+AGG | + | chr1_2:68564726-68564745 | None:intergenic | 25.0% |
| TAAAATGGAATGCATTGTGA+GGG | + | chr1_2:68563281-68563300 | None:intergenic | 30.0% | |
| !!! | ACAAAGTGTTTTTTGAGGAT+AGG | + | chr1_2:68563400-68563419 | None:intergenic | 30.0% |
| TGCATAATGCAACAAGTTAA+TGG | - | chr1_2:68563663-68563682 | Msa0087580:three_prime_UTR | 30.0% | |
| !! | TCTTTGATTCCATTTTTCCA+AGG | - | chr1_2:68564200-68564219 | Msa0087580:CDS | 30.0% |
| AATGGTAGAATTGCTATGTT+GGG | - | chr1_2:68564278-68564297 | Msa0087580:intron | 30.0% | |
| ! | GGCTTTTACAGAATATGTTA+AGG | - | chr1_2:68564313-68564332 | Msa0087580:intron | 30.0% |
| GAAGGTAAACATATGAAAAG+TGG | - | chr1_2:68564566-68564585 | Msa0087580:CDS | 30.0% | |
| TAATTAGAAACTCCCTGAAT+GGG | + | chr1_2:68564634-68564653 | None:intergenic | 30.0% | |
| TTAATTAGAAACTCCCTGAA+TGG | + | chr1_2:68564635-68564654 | None:intergenic | 30.0% | |
| AGGGAGTTTCTAATTAACAT+AGG | - | chr1_2:68564638-68564657 | Msa0087580:five_prime_UTR | 30.0% | |
| TAAAATGGAATGCATTGTGA+GGG | + | chr1_2:68563281-68563300 | None:intergenic | 30.0% | |
| !!! | ACAAAGTGTTTTTTGAGGAT+AGG | + | chr1_2:68563400-68563419 | None:intergenic | 30.0% |
| TGCATAATGCAACAAGTTAA+TGG | - | chr1_2:68563663-68563682 | Msa0087580:three_prime_UTR | 30.0% | |
| !! | TCTTTGATTCCATTTTTCCA+AGG | - | chr1_2:68564200-68564219 | Msa0087580:CDS | 30.0% |
| AATGGTAGAATTGCTATGTT+GGG | - | chr1_2:68564278-68564297 | Msa0087580:intron | 30.0% | |
| ! | GGCTTTTACAGAATATGTTA+AGG | - | chr1_2:68564313-68564332 | Msa0087580:intron | 30.0% |
| GAAGGTAAACATATGAAAAG+TGG | - | chr1_2:68564566-68564585 | Msa0087580:CDS | 30.0% | |
| TAATTAGAAACTCCCTGAAT+GGG | + | chr1_2:68564634-68564653 | None:intergenic | 30.0% | |
| TTAATTAGAAACTCCCTGAA+TGG | + | chr1_2:68564635-68564654 | None:intergenic | 30.0% | |
| AGGGAGTTTCTAATTAACAT+AGG | - | chr1_2:68564638-68564657 | Msa0087580:five_prime_UTR | 30.0% | |
| ATGCATTGTGAGGGATATTA+TGG | + | chr1_2:68563272-68563291 | None:intergenic | 35.0% | |
| CTAAAATGGAATGCATTGTG+AGG | + | chr1_2:68563282-68563301 | None:intergenic | 35.0% | |
| !!! | AGTGTTTTTTGAGGATAGGA+TGG | + | chr1_2:68563396-68563415 | None:intergenic | 35.0% |
| !!! | CAACGACAAAGTGTTTTTTG+AGG | + | chr1_2:68563405-68563424 | None:intergenic | 35.0% |
| CAGAAGGGATGTTGTTAAAT+TGG | + | chr1_2:68563521-68563540 | None:intergenic | 35.0% | |
| TTTACTACTATGCTCACCTT+TGG | + | chr1_2:68563872-68563891 | None:intergenic | 35.0% | |
| ! | CACAAAGTTTTCGGATTTGA+TGG | - | chr1_2:68564013-68564032 | Msa0087580:intron | 35.0% |
| !! | TTTTCGGATTTGATGGCATT+TGG | - | chr1_2:68564020-68564039 | Msa0087580:intron | 35.0% |
| !!! | ATTGGTTTTGTAGCTGCTAT+GGG | - | chr1_2:68564083-68564102 | Msa0087580:intron | 35.0% |
| GGTCTGTTTGATCAAATATC+TGG | - | chr1_2:68564128-68564147 | Msa0087580:intron | 35.0% | |
| CTGTTTGATCAAATATCTGG+TGG | - | chr1_2:68564131-68564150 | Msa0087580:intron | 35.0% | |
| TTTGATCAAATATCTGGTGG+TGG | - | chr1_2:68564134-68564153 | Msa0087580:intron | 35.0% | |
| ACACTAACACCTTGGAAAAA+TGG | + | chr1_2:68564212-68564231 | None:intergenic | 35.0% | |
| !! | ATTTTTCCAAGGTGTTAGTG+TGG | - | chr1_2:68564211-68564230 | Msa0087580:CDS | 35.0% |
| GAATGGTAGAATTGCTATGT+TGG | - | chr1_2:68564277-68564296 | Msa0087580:intron | 35.0% | |
| TATGTTGGGTTTGATTGCTT+TGG | - | chr1_2:68564292-68564311 | Msa0087580:intron | 35.0% | |
| ! | ATTGCGGAAATTTTTCCTTG+TGG | - | chr1_2:68564486-68564505 | Msa0087580:CDS | 35.0% |
| ACTTGTCTTCAATTTCCACA+AGG | + | chr1_2:68564504-68564523 | None:intergenic | 35.0% | |
| !! | GACAAGTGCAACTTTTAGAA+AGG | - | chr1_2:68564517-68564536 | Msa0087580:CDS | 35.0% |
| AATTAGAAACTCCCTGAATG+GGG | + | chr1_2:68564633-68564652 | None:intergenic | 35.0% | |
| ATGCATTGTGAGGGATATTA+TGG | + | chr1_2:68563272-68563291 | None:intergenic | 35.0% | |
| CTAAAATGGAATGCATTGTG+AGG | + | chr1_2:68563282-68563301 | None:intergenic | 35.0% | |
| !!! | AGTGTTTTTTGAGGATAGGA+TGG | + | chr1_2:68563396-68563415 | None:intergenic | 35.0% |
| !!! | CAACGACAAAGTGTTTTTTG+AGG | + | chr1_2:68563405-68563424 | None:intergenic | 35.0% |
| CAGAAGGGATGTTGTTAAAT+TGG | + | chr1_2:68563521-68563540 | None:intergenic | 35.0% | |
| TTTACTACTATGCTCACCTT+TGG | + | chr1_2:68563872-68563891 | None:intergenic | 35.0% | |
| ! | CACAAAGTTTTCGGATTTGA+TGG | - | chr1_2:68564013-68564032 | Msa0087580:intron | 35.0% |
| !! | TTTTCGGATTTGATGGCATT+TGG | - | chr1_2:68564020-68564039 | Msa0087580:intron | 35.0% |
| !!! | ATTGGTTTTGTAGCTGCTAT+GGG | - | chr1_2:68564083-68564102 | Msa0087580:intron | 35.0% |
| GGTCTGTTTGATCAAATATC+TGG | - | chr1_2:68564128-68564147 | Msa0087580:intron | 35.0% | |
| CTGTTTGATCAAATATCTGG+TGG | - | chr1_2:68564131-68564150 | Msa0087580:intron | 35.0% | |
| TTTGATCAAATATCTGGTGG+TGG | - | chr1_2:68564134-68564153 | Msa0087580:intron | 35.0% | |
| ACACTAACACCTTGGAAAAA+TGG | + | chr1_2:68564212-68564231 | None:intergenic | 35.0% | |
| !! | ATTTTTCCAAGGTGTTAGTG+TGG | - | chr1_2:68564211-68564230 | Msa0087580:CDS | 35.0% |
| GAATGGTAGAATTGCTATGT+TGG | - | chr1_2:68564277-68564296 | Msa0087580:intron | 35.0% | |
| TATGTTGGGTTTGATTGCTT+TGG | - | chr1_2:68564292-68564311 | Msa0087580:intron | 35.0% | |
| ! | ATTGCGGAAATTTTTCCTTG+TGG | - | chr1_2:68564486-68564505 | Msa0087580:CDS | 35.0% |
| ACTTGTCTTCAATTTCCACA+AGG | + | chr1_2:68564504-68564523 | None:intergenic | 35.0% | |
| !! | GACAAGTGCAACTTTTAGAA+AGG | - | chr1_2:68564517-68564536 | Msa0087580:CDS | 35.0% |
| AATTAGAAACTCCCTGAATG+GGG | + | chr1_2:68564633-68564652 | None:intergenic | 35.0% | |
| ! | GGTAGGTATAGCATTGAAGA+TGG | + | chr1_2:68563318-68563337 | None:intergenic | 40.0% |
| ! | CTTAGATGGTTAAGGTTGGT+AGG | + | chr1_2:68563335-68563354 | None:intergenic | 40.0% |
| CTACCAACCTTAACCATCTA+AGG | - | chr1_2:68563333-68563352 | Msa0087580:three_prime_UTR | 40.0% | |
| ACACCTTAGATGGTTAAGGT+TGG | + | chr1_2:68563339-68563358 | None:intergenic | 40.0% | |
| CACTACACCTTAGATGGTTA+AGG | + | chr1_2:68563343-68563362 | None:intergenic | 40.0% | |
| TCACTTCACTACACCTTAGA+TGG | + | chr1_2:68563349-68563368 | None:intergenic | 40.0% | |
| !! | GGATGGCTTTGTAAAACACT+TGG | + | chr1_2:68563379-68563398 | None:intergenic | 40.0% |
| AGCTTGGCATATACACAGAA+GGG | + | chr1_2:68563536-68563555 | None:intergenic | 40.0% | |
| AAGCTTGGCATATACACAGA+AGG | + | chr1_2:68563537-68563556 | None:intergenic | 40.0% | |
| CTAGCATTTCTTCTCAAGCT+TGG | + | chr1_2:68563552-68563571 | None:intergenic | 40.0% | |
| ! | GAAATGCTAGCCTCAAAGTT+CGG | - | chr1_2:68563562-68563581 | Msa0087580:three_prime_UTR | 40.0% |
| TTTGGTGAACGTGTATAGGT+TGG | + | chr1_2:68563854-68563873 | None:intergenic | 40.0% | |
| AACCTATACACGTTCACCAA+AGG | - | chr1_2:68563853-68563872 | Msa0087580:CDS | 40.0% | |
| ! | GCAGATGAGCACAAAGTTTT+CGG | - | chr1_2:68564004-68564023 | Msa0087580:CDS | 40.0% |
| !! | AACCTTCCATTGATTCTCTC+AGG | + | chr1_2:68564056-68564075 | None:intergenic | 40.0% |
| TGAGAGAATCAATGGAAGGT+TGG | - | chr1_2:68564055-68564074 | Msa0087580:intron | 40.0% | |
| ! | AATGGAAGGTTGGCTATGAT+TGG | - | chr1_2:68564065-68564084 | Msa0087580:intron | 40.0% |
| !!! | GATTGGTTTTGTAGCTGCTA+TGG | - | chr1_2:68564082-68564101 | Msa0087580:intron | 40.0% |
| !!! | TTGGTTTTGTAGCTGCTATG+GGG | - | chr1_2:68564084-68564103 | Msa0087580:intron | 40.0% |
| AGTGTGGAGTCTAAGTCAAA+AGG | - | chr1_2:68564227-68564246 | Msa0087580:CDS | 40.0% | |
| TCAGTTATCATCCCCATTCA+GGG | - | chr1_2:68564619-68564638 | Msa0087580:five_prime_UTR | 40.0% | |
| TAATGTGTTGAGCGCTCAAA+TGG | + | chr1_2:68564701-68564720 | None:intergenic | 40.0% | |
| ! | GGTAGGTATAGCATTGAAGA+TGG | + | chr1_2:68563318-68563337 | None:intergenic | 40.0% |
| ! | CTTAGATGGTTAAGGTTGGT+AGG | + | chr1_2:68563335-68563354 | None:intergenic | 40.0% |
| CTACCAACCTTAACCATCTA+AGG | - | chr1_2:68563333-68563352 | Msa0087580:three_prime_UTR | 40.0% | |
| ACACCTTAGATGGTTAAGGT+TGG | + | chr1_2:68563339-68563358 | None:intergenic | 40.0% | |
| CACTACACCTTAGATGGTTA+AGG | + | chr1_2:68563343-68563362 | None:intergenic | 40.0% | |
| TCACTTCACTACACCTTAGA+TGG | + | chr1_2:68563349-68563368 | None:intergenic | 40.0% | |
| !! | GGATGGCTTTGTAAAACACT+TGG | + | chr1_2:68563379-68563398 | None:intergenic | 40.0% |
| AGCTTGGCATATACACAGAA+GGG | + | chr1_2:68563536-68563555 | None:intergenic | 40.0% | |
| AAGCTTGGCATATACACAGA+AGG | + | chr1_2:68563537-68563556 | None:intergenic | 40.0% | |
| CTAGCATTTCTTCTCAAGCT+TGG | + | chr1_2:68563552-68563571 | None:intergenic | 40.0% | |
| ! | GAAATGCTAGCCTCAAAGTT+CGG | - | chr1_2:68563562-68563581 | Msa0087580:three_prime_UTR | 40.0% |
| TTTGGTGAACGTGTATAGGT+TGG | + | chr1_2:68563854-68563873 | None:intergenic | 40.0% | |
| AACCTATACACGTTCACCAA+AGG | - | chr1_2:68563853-68563872 | Msa0087580:CDS | 40.0% | |
| ! | GCAGATGAGCACAAAGTTTT+CGG | - | chr1_2:68564004-68564023 | Msa0087580:CDS | 40.0% |
| !! | AACCTTCCATTGATTCTCTC+AGG | + | chr1_2:68564056-68564075 | None:intergenic | 40.0% |
| TGAGAGAATCAATGGAAGGT+TGG | - | chr1_2:68564055-68564074 | Msa0087580:intron | 40.0% | |
| ! | AATGGAAGGTTGGCTATGAT+TGG | - | chr1_2:68564065-68564084 | Msa0087580:intron | 40.0% |
| !!! | GATTGGTTTTGTAGCTGCTA+TGG | - | chr1_2:68564082-68564101 | Msa0087580:intron | 40.0% |
| !!! | TTGGTTTTGTAGCTGCTATG+GGG | - | chr1_2:68564084-68564103 | Msa0087580:intron | 40.0% |
| AGTGTGGAGTCTAAGTCAAA+AGG | - | chr1_2:68564227-68564246 | Msa0087580:CDS | 40.0% | |
| TCAGTTATCATCCCCATTCA+GGG | - | chr1_2:68564619-68564638 | Msa0087580:five_prime_UTR | 40.0% | |
| TAATGTGTTGAGCGCTCAAA+TGG | + | chr1_2:68564701-68564720 | None:intergenic | 40.0% | |
| CGAAAACATTACCTCAGCCA+TGG | + | chr1_2:68563589-68563608 | None:intergenic | 45.0% | |
| !! | GTGCTGATGGTGGTGTAATT+GGG | + | chr1_2:68563808-68563827 | None:intergenic | 45.0% |
| !! | GTATAGGTTGGTTGTGGTTG+TGG | + | chr1_2:68563842-68563861 | None:intergenic | 45.0% |
| !! | GAACGTGTATAGGTTGGTTG+TGG | + | chr1_2:68563848-68563867 | None:intergenic | 45.0% |
| CACCTTTGGTGAACGTGTAT+AGG | + | chr1_2:68563858-68563877 | None:intergenic | 45.0% | |
| ! | TCGGATTTGATGGCATTTGG+TGG | - | chr1_2:68564023-68564042 | Msa0087580:intron | 45.0% |
| ! | CGGATTTGATGGCATTTGGT+GGG | - | chr1_2:68564024-68564043 | Msa0087580:intron | 45.0% |
| CACCTGAGAGAATCAATGGA+AGG | - | chr1_2:68564051-68564070 | Msa0087580:intron | 45.0% | |
| !!! | TGGTTTTGTAGCTGCTATGG+GGG | - | chr1_2:68564085-68564104 | Msa0087580:intron | 45.0% |
| GTGGAGATAGCAAATGGACA+GGG | - | chr1_2:68564107-68564126 | Msa0087580:intron | 45.0% | |
| !! | TATCTGGTGGTGGAATTCCA+TGG | - | chr1_2:68564144-68564163 | Msa0087580:intron | 45.0% |
| TGGTGGAATTCCATGGTTCT+TGG | - | chr1_2:68564151-68564170 | Msa0087580:intron | 45.0% | |
| GGTGGAATTCCATGGTTCTT+GGG | - | chr1_2:68564152-68564171 | Msa0087580:intron | 45.0% | |
| GTGGAATTCCATGGTTCTTG+GGG | - | chr1_2:68564153-68564172 | Msa0087580:intron | 45.0% | |
| TAGACTCCACACTAACACCT+TGG | + | chr1_2:68564220-68564239 | None:intergenic | 45.0% | |
| ATTCCACAACTCAGCATCTG+AGG | + | chr1_2:68564261-68564280 | None:intergenic | 45.0% | |
| TCAGATGCTGAGTTGTGGAA+TGG | - | chr1_2:68564260-68564279 | Msa0087580:intron | 45.0% | |
| CTGAATGGGGATGATAACTG+AGG | + | chr1_2:68564620-68564639 | None:intergenic | 45.0% | |
| CTCAGTTATCATCCCCATTC+AGG | - | chr1_2:68564618-68564637 | Msa0087580:five_prime_UTR | 45.0% | |
| CGAAAACATTACCTCAGCCA+TGG | + | chr1_2:68563589-68563608 | None:intergenic | 45.0% | |
| !! | GTGCTGATGGTGGTGTAATT+GGG | + | chr1_2:68563808-68563827 | None:intergenic | 45.0% |
| !! | GTATAGGTTGGTTGTGGTTG+TGG | + | chr1_2:68563842-68563861 | None:intergenic | 45.0% |
| !! | GAACGTGTATAGGTTGGTTG+TGG | + | chr1_2:68563848-68563867 | None:intergenic | 45.0% |
| CACCTTTGGTGAACGTGTAT+AGG | + | chr1_2:68563858-68563877 | None:intergenic | 45.0% | |
| ! | TCGGATTTGATGGCATTTGG+TGG | - | chr1_2:68564023-68564042 | Msa0087580:intron | 45.0% |
| ! | CGGATTTGATGGCATTTGGT+GGG | - | chr1_2:68564024-68564043 | Msa0087580:intron | 45.0% |
| CACCTGAGAGAATCAATGGA+AGG | - | chr1_2:68564051-68564070 | Msa0087580:intron | 45.0% | |
| !!! | TGGTTTTGTAGCTGCTATGG+GGG | - | chr1_2:68564085-68564104 | Msa0087580:intron | 45.0% |
| GTGGAGATAGCAAATGGACA+GGG | - | chr1_2:68564107-68564126 | Msa0087580:intron | 45.0% | |
| !! | TATCTGGTGGTGGAATTCCA+TGG | - | chr1_2:68564144-68564163 | Msa0087580:intron | 45.0% |
| TGGTGGAATTCCATGGTTCT+TGG | - | chr1_2:68564151-68564170 | Msa0087580:intron | 45.0% | |
| GGTGGAATTCCATGGTTCTT+GGG | - | chr1_2:68564152-68564171 | Msa0087580:intron | 45.0% | |
| GTGGAATTCCATGGTTCTTG+GGG | - | chr1_2:68564153-68564172 | Msa0087580:intron | 45.0% | |
| TAGACTCCACACTAACACCT+TGG | + | chr1_2:68564220-68564239 | None:intergenic | 45.0% | |
| ATTCCACAACTCAGCATCTG+AGG | + | chr1_2:68564261-68564280 | None:intergenic | 45.0% | |
| TCAGATGCTGAGTTGTGGAA+TGG | - | chr1_2:68564260-68564279 | Msa0087580:intron | 45.0% | |
| CTGAATGGGGATGATAACTG+AGG | + | chr1_2:68564620-68564639 | None:intergenic | 45.0% | |
| CTCAGTTATCATCCCCATTC+AGG | - | chr1_2:68564618-68564637 | Msa0087580:five_prime_UTR | 45.0% | |
| !! | ATCATTATTATTTATTAAAA+GGG | + | chr1_2:68563975-68563994 | None:intergenic | 5.0% |
| !! | ATCATTATTATTTATTAAAA+GGG | + | chr1_2:68563975-68563994 | None:intergenic | 5.0% |
| CCTGCTAGAAATGCTGGTCA+TGG | + | chr1_2:68563487-68563506 | None:intergenic | 50.0% | |
| !! | CCATGACCAGCATTTCTAGC+AGG | - | chr1_2:68563484-68563503 | Msa0087580:three_prime_UTR | 50.0% |
| TCTAGGCCTGCTAGAAATGC+TGG | + | chr1_2:68563493-68563512 | None:intergenic | 50.0% | |
| TAGCCTCAAAGTTCGGTCCA+TGG | - | chr1_2:68563569-68563588 | Msa0087580:three_prime_UTR | 50.0% | |
| AGGGCAGAAAGAGCAACCAA+AGG | - | chr1_2:68563772-68563791 | Msa0087580:CDS | 50.0% | |
| ATTGGGTCTACAGGCACCTT+TGG | + | chr1_2:68563791-68563810 | None:intergenic | 50.0% | |
| GGTGGTGTAATTGGGTCTAC+AGG | + | chr1_2:68563800-68563819 | None:intergenic | 50.0% | |
| !! | GGTGCTGATGGTGGTGTAAT+TGG | + | chr1_2:68563809-68563828 | None:intergenic | 50.0% |
| !! | TAGGTTGGTTGTGGTTGTGG+TGG | + | chr1_2:68563839-68563858 | None:intergenic | 50.0% |
| !! | CCATTGATTCTCTCAGGTGC+TGG | + | chr1_2:68564050-68564069 | None:intergenic | 50.0% |
| CCAGCACCTGAGAGAATCAA+TGG | - | chr1_2:68564047-68564066 | Msa0087580:intron | 50.0% | |
| ! | TTTTGTAGCTGCTATGGGGG+TGG | - | chr1_2:68564088-68564107 | Msa0087580:intron | 50.0% |
| ATGGGGGTGGAGATAGCAAA+TGG | - | chr1_2:68564101-68564120 | Msa0087580:intron | 50.0% | |
| GGTGGAGATAGCAAATGGAC+AGG | - | chr1_2:68564106-68564125 | Msa0087580:intron | 50.0% | |
| ACACTTGTCCCCAAGAACCA+TGG | + | chr1_2:68564164-68564183 | None:intergenic | 50.0% | |
| TGTCCTCAGATGCTGAGTTG+TGG | - | chr1_2:68564255-68564274 | Msa0087580:intron | 50.0% | |
| CCTGCTAGAAATGCTGGTCA+TGG | + | chr1_2:68563487-68563506 | None:intergenic | 50.0% | |
| !! | CCATGACCAGCATTTCTAGC+AGG | - | chr1_2:68563484-68563503 | Msa0087580:three_prime_UTR | 50.0% |
| TCTAGGCCTGCTAGAAATGC+TGG | + | chr1_2:68563493-68563512 | None:intergenic | 50.0% | |
| TAGCCTCAAAGTTCGGTCCA+TGG | - | chr1_2:68563569-68563588 | Msa0087580:three_prime_UTR | 50.0% | |
| AGGGCAGAAAGAGCAACCAA+AGG | - | chr1_2:68563772-68563791 | Msa0087580:CDS | 50.0% | |
| ATTGGGTCTACAGGCACCTT+TGG | + | chr1_2:68563791-68563810 | None:intergenic | 50.0% | |
| GGTGGTGTAATTGGGTCTAC+AGG | + | chr1_2:68563800-68563819 | None:intergenic | 50.0% | |
| !! | GGTGCTGATGGTGGTGTAAT+TGG | + | chr1_2:68563809-68563828 | None:intergenic | 50.0% |
| !! | TAGGTTGGTTGTGGTTGTGG+TGG | + | chr1_2:68563839-68563858 | None:intergenic | 50.0% |
| !! | CCATTGATTCTCTCAGGTGC+TGG | + | chr1_2:68564050-68564069 | None:intergenic | 50.0% |
| CCAGCACCTGAGAGAATCAA+TGG | - | chr1_2:68564047-68564066 | Msa0087580:intron | 50.0% | |
| ! | TTTTGTAGCTGCTATGGGGG+TGG | - | chr1_2:68564088-68564107 | Msa0087580:intron | 50.0% |
| ATGGGGGTGGAGATAGCAAA+TGG | - | chr1_2:68564101-68564120 | Msa0087580:intron | 50.0% | |
| GGTGGAGATAGCAAATGGAC+AGG | - | chr1_2:68564106-68564125 | Msa0087580:intron | 50.0% | |
| ACACTTGTCCCCAAGAACCA+TGG | + | chr1_2:68564164-68564183 | None:intergenic | 50.0% | |
| TGTCCTCAGATGCTGAGTTG+TGG | - | chr1_2:68564255-68564274 | Msa0087580:intron | 50.0% | |
| CAGCCATGGACCGAACTTTG+AGG | + | chr1_2:68563575-68563594 | None:intergenic | 55.0% | |
| CAAAGTTCGGTCCATGGCTG+AGG | - | chr1_2:68563575-68563594 | Msa0087580:three_prime_UTR | 55.0% | |
| !! | TGTGGTTGTGGTGGTGGAGT+TGG | + | chr1_2:68563830-68563849 | None:intergenic | 55.0% |
| GTTGGTTGTGGTTGTGGTGG+TGG | + | chr1_2:68563836-68563855 | None:intergenic | 55.0% | |
| GAGCGCTCAAATGGTTGCAC+AGG | + | chr1_2:68564692-68564711 | None:intergenic | 55.0% | |
| CAGCCATGGACCGAACTTTG+AGG | + | chr1_2:68563575-68563594 | None:intergenic | 55.0% | |
| CAAAGTTCGGTCCATGGCTG+AGG | - | chr1_2:68563575-68563594 | Msa0087580:three_prime_UTR | 55.0% | |
| !! | TGTGGTTGTGGTGGTGGAGT+TGG | + | chr1_2:68563830-68563849 | None:intergenic | 55.0% |
| GTTGGTTGTGGTTGTGGTGG+TGG | + | chr1_2:68563836-68563855 | None:intergenic | 55.0% | |
| GAGCGCTCAAATGGTTGCAC+AGG | + | chr1_2:68564692-68564711 | None:intergenic | 55.0% | |
| !! | GGTGGAGTTGGTGCTGATGG+TGG | + | chr1_2:68563818-68563837 | None:intergenic | 60.0% |
| !! | GGTGGTGGAGTTGGTGCTGA+TGG | + | chr1_2:68563821-68563840 | None:intergenic | 60.0% |
| !! | GGTGGAGTTGGTGCTGATGG+TGG | + | chr1_2:68563818-68563837 | None:intergenic | 60.0% |
| !! | GGTGGTGGAGTTGGTGCTGA+TGG | + | chr1_2:68563821-68563840 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 68563251 | 68564787 | 68563251 | ID=Msa0087580;Name=Msa0087580 |
| chr1_2 | mRNA | 68563251 | 68564787 | 68563251 | ID=Msa0087580-mRNA-1;Parent=Msa0087580;Name=Msa0087580-mRNA-1;_AED=0.00;_eAED=0.00;_QI=196|1|1|1|1|1|3|435|199 |
| chr1_2 | exon | 68563251 | 68564030 | 68563251 | ID=Msa0087580-mRNA-1:exon:23403;Parent=Msa0087580-mRNA-1 |
| chr1_2 | exon | 68564164 | 68564268 | 68564164 | ID=Msa0087580-mRNA-1:exon:23402;Parent=Msa0087580-mRNA-1 |
| chr1_2 | exon | 68564442 | 68564787 | 68564442 | ID=Msa0087580-mRNA-1:exon:23401;Parent=Msa0087580-mRNA-1 |
| chr1_2 | five_prime_UTR | 68564592 | 68564787 | 68564592 | ID=Msa0087580-mRNA-1:five_prime_utr;Parent=Msa0087580-mRNA-1 |
| chr1_2 | CDS | 68564442 | 68564591 | 68564442 | ID=Msa0087580-mRNA-1:cds;Parent=Msa0087580-mRNA-1 |
| chr1_2 | CDS | 68564164 | 68564268 | 68564164 | ID=Msa0087580-mRNA-1:cds;Parent=Msa0087580-mRNA-1 |
| chr1_2 | CDS | 68563686 | 68564030 | 68563686 | ID=Msa0087580-mRNA-1:cds;Parent=Msa0087580-mRNA-1 |
| chr1_2 | three_prime_UTR | 68563251 | 68563685 | 68563251 | ID=Msa0087580-mRNA-1:three_prime_utr;Parent=Msa0087580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
