AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1296270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1296270 MtrunA17_Chr8g0375081 94.428 664 21 2 1 649 1 663 0.0 1283
Msa1296270 MtrunA17_Chr5g0402211 67.841 681 169 7 1 649 1 663 0.0 917
Msa1296270 MtrunA17_Chr4g0010391 52.955 423 170 7 77 480 51 463 1.18e-131 395
Msa1296270 MtrunA17_Chr5g0399671 25.064 391 237 13 73 433 36 400 5.22e-21 96.3
Msa1296270 MtrunA17_Chr5g0399661 26.455 378 211 15 75 417 34 379 1.15e-18 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1296270 AT5G67030.1 63.952 663 216 7 1 644 1 659 0.0 838
Msa1296270 AT5G67030.2 65.025 589 184 6 1 571 1 585 0.0 746
Msa1296270 AT2G35660.1 25.871 402 221 16 51 413 17 380 1.73e-16 82.8
Msa1296270 AT5G05320.1 24.863 366 223 14 83 416 9 354 1.62e-15 79.7
Msa1296270 AT2G29720.1 26.236 263 161 7 188 426 138 391 3.32e-15 79.0
Msa1296270 AT2G35660.2 28.736 261 145 9 179 416 27 269 1.64e-14 75.5
Msa1296270 AT2G35660.3 28.736 261 145 9 179 416 27 269 1.64e-14 75.5
Msa1296270 AT4G38540.1 25.815 368 219 15 83 416 9 356 3.02e-14 75.5

Find 193 sgRNAs with CRISPR-Local

Find 415 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTCATCCTTTGGATATT+TGG 0.045763 8_3:-55374615 Msa1296270:three_prime_UTR
GGTCTTGTTGATGGAGTTTC+TGG 0.107276 8_3:-55379997 Msa1296270:CDS
AGGGCTGAATCAACCTTAAT+TGG 0.126115 8_3:+55376937 None:intergenic
ACAGAATACCGACATTTAAA+TGG 0.190529 8_3:-55377657 Msa1296270:CDS
TTCTCATCCTTTGGATATTT+GGG 0.197955 8_3:-55374614 Msa1296270:three_prime_UTR
ATTATTGTAAAATAAATTAA+AGG 0.207708 8_3:+55380719 None:intergenic
TTTAATTGTGATTTACAAAA+TGG 0.216266 8_3:-55374689 Msa1296270:three_prime_UTR
TTGATGGAGTTTCTGGTTCT+TGG 0.216760 8_3:-55379990 Msa1296270:intron
CATCCTCCTTGGCCCATATT+TGG 0.224325 8_3:+55377586 None:intergenic
CCATGCCATGCAGCCAAATA+TGG 0.234270 8_3:-55377599 Msa1296270:CDS
TGGACACGAGCAGGGTAATT+TGG 0.259273 8_3:+55375170 None:intergenic
AACGTGTTTGTGTTTGTTCT+TGG 0.265233 8_3:-55380528 Msa1296270:five_prime_UTR
TCAACTTCTTTCTCATCCTT+TGG 0.267666 8_3:-55374623 Msa1296270:three_prime_UTR
ATTACTGGTGATAGAATTAA+TGG 0.268199 8_3:-55380018 Msa1296270:CDS
TCCGAGAGCCTGCAACTTAT+TGG 0.279007 8_3:+55376107 None:intergenic
AGGGAAATTATTATTATTAG+AGG 0.287356 8_3:+55380739 None:intergenic
TAAATCAGGGAACCCAATTA+AGG 0.287563 8_3:-55376950 Msa1296270:CDS
ATGACCATTTGATAGATCTT+AGG 0.287721 8_3:-55374529 Msa1296270:three_prime_UTR
ATAAGGTATGTTACCTCCTT+AGG 0.292414 8_3:+55376917 None:intergenic
AAGGTTGCTCAAGATATTTA+AGG 0.302601 8_3:-55377752 Msa1296270:CDS
CCATATGATGTTCTTCAGTT+TGG 0.302837 8_3:-55375146 Msa1296270:CDS
ATGAGAGTTGGTTGTATTAC+TGG 0.312017 8_3:-55380033 Msa1296270:CDS
AACCTCCCTCCAACTCTTCC+AGG 0.317004 8_3:+55376293 None:intergenic
GTCTATGTTGAGCTGGATCT+TGG 0.324946 8_3:-55376249 Msa1296270:CDS
GAGATGAAACCCTGCATAAT+CGG 0.328359 8_3:-55375719 Msa1296270:CDS
AGGTGTTGGTCTTGGTCCTT+TGG 0.330707 8_3:-55376450 Msa1296270:CDS
GGGAAGGTACCGAGTATTCT+TGG 0.333711 8_3:-55377990 Msa1296270:CDS
CTTGTAGCAGGTGGTGGAAT+TGG 0.337458 8_3:-55380225 Msa1296270:CDS
AAGGTGAGAAGAAGAATCTT+AGG 0.348933 8_3:-55380251 Msa1296270:CDS
GAGTAATGCTTTGGCTGCTT+TGG 0.349359 8_3:-55380088 Msa1296270:CDS
TCATCCTTCTTCGCGATGCT+TGG 0.364245 8_3:+55374969 None:intergenic
CTAGAACCATTCATTAATAA+TGG 0.366611 8_3:+55374580 None:intergenic
CTATATGTTTGCAGTATTGA+AGG 0.367334 8_3:-55375212 Msa1296270:intron
GCTGGATCTTGGGTGGAAAT+AGG 0.369630 8_3:-55376238 Msa1296270:intron
GCAGGTTTCATTTCGAGTTA+AGG 0.373966 8_3:-55375006 Msa1296270:intron
TGGGAACAAAGTATTAAATC+AGG 0.382091 8_3:-55376964 Msa1296270:CDS
CAATGAAAAGTCTTTGTTTG+TGG 0.384730 8_3:+55380401 None:intergenic
CAGAATACCGACATTTAAAT+GGG 0.387171 8_3:-55377656 Msa1296270:CDS
CCAAACTGAAGAACATCATA+TGG 0.388753 8_3:+55375146 None:intergenic
TGCGAAATTAACGACATTAC+TGG 0.391898 8_3:+55378906 None:intergenic
AGAATTAATGGTCTTGTTGA+TGG 0.394310 8_3:-55380006 Msa1296270:CDS
TGCAGTGGAACGTGGTCTTC+CGG 0.396487 8_3:-55379004 Msa1296270:CDS
TTATTGTAAAATAAATTAAA+GGG 0.398911 8_3:+55380720 None:intergenic
AAGGTAGACCAATAAGTTGC+AGG 0.399484 8_3:-55376115 Msa1296270:CDS
CCATGATATTTACTTGAGTA+AGG 0.401078 8_3:-55374506 Msa1296270:three_prime_UTR
CAATGGCCATGCATCCTCCT+TGG 0.403273 8_3:+55377575 None:intergenic
ACATGAATGGGAGTGCTTGT+AGG 0.415467 8_3:+55374796 None:intergenic
AATGAAAAGTCTTTGTTTGT+GGG 0.415804 8_3:+55380402 None:intergenic
AGGTGGTGGAATTGGTGGAT+TGG 0.416278 8_3:-55380217 Msa1296270:CDS
CTTGAGAATGATGCTGTAGA+TGG 0.416671 8_3:+55380441 None:intergenic
CATCCTTTGGATATTTGGGC+TGG 0.420832 8_3:-55374610 Msa1296270:three_prime_UTR
GCACTTGAGCGTGCTATTAA+CGG 0.420952 8_3:-55375909 Msa1296270:CDS
GTATTGAAGGAAAGCGATAT+CGG 0.423355 8_3:-55375199 Msa1296270:CDS
GGGCTGAATCAACCTTAATT+GGG 0.424670 8_3:+55376938 None:intergenic
GCATTACTCTGTATCTGAAT+AGG 0.430156 8_3:+55380102 None:intergenic
AAGGGTCGTGTTACTTTGCT+TGG 0.430187 8_3:-55377631 Msa1296270:CDS
ATTATTATTATTAGAGGTTG+AGG 0.437368 8_3:+55380745 None:intergenic
TGGTTGGAGCAGATGGTATA+TGG 0.438327 8_3:-55378688 Msa1296270:CDS
TCAGATACAGAGTAATGCTT+TGG 0.442106 8_3:-55380097 Msa1296270:CDS
TTACCATGTGGAGAGGAAAC+AGG 0.444036 8_3:-55375773 Msa1296270:CDS
CTGCTGACATTGAATCTGTT+GGG 0.448523 8_3:-55378124 Msa1296270:intron
GGAAGGTACCGAGTATTCTT+GGG 0.449532 8_3:-55377989 Msa1296270:CDS
GCATATCTAGGTGTTGGTCT+TGG 0.449896 8_3:-55376458 Msa1296270:CDS
TACTTTGTATCTTCAGATGT+TGG 0.454646 8_3:-55377956 Msa1296270:CDS
TTAGCACCATTATTAATGAA+TGG 0.456923 8_3:-55374586 Msa1296270:three_prime_UTR
AAAATATGAAGGAGACCTAT+TGG 0.457453 8_3:-55378708 Msa1296270:CDS
GCTTTGGCTGCAAAGAGAAA+AGG 0.457691 8_3:-55380189 Msa1296270:CDS
TGTTTGTGGGAATTGAGAAA+AGG 0.460698 8_3:+55380415 None:intergenic
GACCTATTGGTTGGAGCAGA+TGG 0.462758 8_3:-55378695 Msa1296270:CDS
TTTCGCAGACGATGGAAGTA+AGG 0.463415 8_3:-55378890 Msa1296270:intron
AGGTTGCTCAAGATATTTAA+GGG 0.464153 8_3:-55377751 Msa1296270:CDS
TCCACTTACAAGGCATATCT+AGG 0.464186 8_3:-55376470 Msa1296270:CDS
GTTTGTGGGAATTGAGAAAA+GGG 0.464297 8_3:+55380416 None:intergenic
ACCAATAAGTTGCAGGCTCT+CGG 0.466964 8_3:-55376108 Msa1296270:CDS
CGCTCCAAGCATCGCGAAGA+AGG 0.469084 8_3:-55374973 Msa1296270:CDS
TGCTCAAGATATTTAAGGGC+TGG 0.472538 8_3:-55377747 Msa1296270:CDS
AATCTTAGGGTGCTTGTAGC+AGG 0.473544 8_3:-55380237 Msa1296270:CDS
TGTTGGTCTTGGTCCTTTGG+AGG 0.476404 8_3:-55376447 Msa1296270:intron
TCTATGTTGAGCTGGATCTT+GGG 0.477932 8_3:-55376248 Msa1296270:CDS
GGCTAGAATGGCAGCTCTGA+TGG 0.480784 8_3:-55376495 Msa1296270:CDS
AGATGAAACCCTGCATAATC+GGG 0.484055 8_3:-55375718 Msa1296270:intron
GGATCCCTTGCAAAGTCATT+CGG 0.484452 8_3:+55378965 None:intergenic
CCTGCTGACATTGAATCTGT+TGG 0.485317 8_3:-55378125 Msa1296270:CDS
CATGCCATGCAGCCAAATAT+GGG 0.485965 8_3:-55377598 Msa1296270:CDS
GGGATCCTTGCTCGTGCAGT+TGG 0.490259 8_3:-55378949 Msa1296270:CDS
AGGGTGCTTGTAGCAGGTGG+TGG 0.491600 8_3:-55380231 Msa1296270:CDS
TCATATGGGTGGACACGAGC+AGG 0.492859 8_3:+55375161 None:intergenic
TACCATCTGCTCCAACCAAT+AGG 0.492982 8_3:+55378693 None:intergenic
TAAGGTATGTTACCTCCTTA+GGG 0.493151 8_3:+55376918 None:intergenic
ACCTAGATATGCCTTGTAAG+TGG 0.501034 8_3:+55376469 None:intergenic
CCCTTTCCCCATTTAAATGT+CGG 0.502490 8_3:+55377649 None:intergenic
TTATTTATTACGCAGGCAAA+CGG 0.503314 8_3:-55375963 Msa1296270:intron
TTGAGTGCTGTGAGAGGAGA+GGG 0.503382 8_3:-55380138 Msa1296270:CDS
GAGAAAAGGATTTGAAGTGA+TGG 0.503804 8_3:-55380175 Msa1296270:CDS
AGAGGAGAGGGACAGTATAG+AGG 0.505969 8_3:-55380126 Msa1296270:CDS
TTGGCCCATATTTGGCTGCA+TGG 0.506205 8_3:+55377594 None:intergenic
CCTCATCCTGGAAGAGTTGG+AGG 0.506956 8_3:-55376299 Msa1296270:CDS
CTGCGAGTTGCAGTTATTCA+CGG 0.507455 8_3:-55376521 Msa1296270:CDS
ATTCGGTTCATCAGCACCAC+CGG 0.508435 8_3:+55377892 None:intergenic
TATTCACGGGATGGCTAGAA+TGG 0.508646 8_3:-55376507 Msa1296270:CDS
CCGCATATCAGTTACGAAGA+AGG 0.508786 8_3:+55375338 None:intergenic
CATCATCATCTTCAAACCAT+TGG 0.509688 8_3:+55375931 None:intergenic
CAAAGGAGTTGGACAATGCA+TGG 0.510736 8_3:-55376984 Msa1296270:CDS
CCATATTTGGCTGCATGGCA+TGG 0.514534 8_3:+55377599 None:intergenic
GTAGCAGGTGGTGGAATTGG+TGG 0.516389 8_3:-55380222 Msa1296270:CDS
ATTCAATGAGTTGTAACATA+AGG 0.518245 8_3:+55380464 None:intergenic
TTTGTATCTTCAGATGTTGG+AGG 0.518609 8_3:-55377953 Msa1296270:CDS
ATTAGCCGAATGACTTTGCA+AGG 0.522092 8_3:-55378970 Msa1296270:CDS
TTATCAACTTGCAAAGGAGT+TGG 0.523536 8_3:-55376995 Msa1296270:CDS
ACTGATATGCGGAGCGAACA+TGG 0.524860 8_3:-55375327 Msa1296270:CDS
TTGAATGGAGTGACCATGGA+AGG 0.526563 8_3:-55374744 Msa1296270:three_prime_UTR
ATGGCCTAAGATCTATCAAA+TGG 0.527474 8_3:+55374525 None:intergenic
TGCAGGAGTGCAGTGCAAGA+GGG 0.528321 8_3:-55375533 Msa1296270:intron
GCTGATGAAGTTATGAGAGT+TGG 0.529848 8_3:-55380045 Msa1296270:CDS
TATGAAGGAGACCTATTGGT+TGG 0.530003 8_3:-55378704 Msa1296270:CDS
TATTGAAGGAAAGCGATATC+GGG 0.530365 8_3:-55375198 Msa1296270:CDS
AAGAGAAATATATACCTCAA+TGG 0.531706 8_3:+55377558 None:intergenic
TGCGGAGCGAACATGGCACT+TGG 0.532012 8_3:-55375320 Msa1296270:CDS
TGATGCCGTCTATGTTGAGC+TGG 0.533051 8_3:-55376256 Msa1296270:CDS
ATGATATTTACTTGAGTAAG+GGG 0.533570 8_3:-55374504 Msa1296270:three_prime_UTR
GGAAGACCACGTTCCACTGC+AGG 0.534367 8_3:+55379006 None:intergenic
TGCGAGTTGCAGTTATTCAC+GGG 0.536880 8_3:-55376520 Msa1296270:CDS
TCTGATGGCTTCCACTTACA+AGG 0.538355 8_3:-55376480 Msa1296270:CDS
ACCGACATTTAAATGGGGAA+AGG 0.538718 8_3:-55377650 Msa1296270:CDS
CCGACATTTAAATGGGGAAA+GGG 0.542332 8_3:-55377649 Msa1296270:CDS
TCTTCAGTTTGGTTCTGAGA+AGG 0.544271 8_3:-55375135 Msa1296270:intron
CCTTACTCAAGTAAATATCA+TGG 0.545018 8_3:+55374506 None:intergenic
GTAGGCATACCCGATTATGC+AGG 0.545437 8_3:+55375709 None:intergenic
ATTTAAGTTCCTACCTCCAA+AGG 0.549688 8_3:+55376434 None:intergenic
AGGTGAGAAGAAGAATCTTA+GGG 0.549882 8_3:-55380250 Msa1296270:CDS
AGGATGAGGTATGCGAAAGT+TGG 0.550467 8_3:+55376313 None:intergenic
CATGATATTTACTTGAGTAA+GGG 0.556833 8_3:-55374505 Msa1296270:three_prime_UTR
AACTTTCGCATACCTCATCC+TGG 0.558624 8_3:-55376311 Msa1296270:CDS
CCTCCAACTCTTCCAGGATG+AGG 0.559187 8_3:+55376299 None:intergenic
TACAAGGCATATCTAGGTGT+TGG 0.563217 8_3:-55376464 Msa1296270:CDS
TAGTAAATTCGAGCATGTGT+TGG 0.564768 8_3:+55375372 None:intergenic
AGGAGGATGCATGGCCATTG+AGG 0.567803 8_3:-55377572 Msa1296270:intron
ATACCTCATCCTGGAAGAGT+TGG 0.569338 8_3:-55376302 Msa1296270:CDS
GTTTGTGTCCCAAGAATACT+CGG 0.569437 8_3:+55377981 None:intergenic
CATACTTGCCACAGATGAAG+AGG 0.571170 8_3:-55377704 Msa1296270:CDS
CAAACTGAAGAACATCATAT+GGG 0.572944 8_3:+55375147 None:intergenic
CTTCTTCGCGATGCTTGGAG+CGG 0.573401 8_3:+55374974 None:intergenic
GTATCTTCAGATGTTGGAGG+CGG 0.575088 8_3:-55377950 Msa1296270:CDS
GCTACATACACTGCCTTCCA+TGG 0.575918 8_3:+55374731 None:intergenic
ACACGAGCAGGGTAATTTGG+AGG 0.579622 8_3:+55375173 None:intergenic
GCAGGAGTGCAGTGCAAGAG+GGG 0.580034 8_3:-55375532 Msa1296270:intron
CGGCTAATAACTCTTGTGAC+CGG 0.582389 8_3:+55378985 None:intergenic
TTGCAGGAGTGCAGTGCAAG+AGG 0.583757 8_3:-55375534 Msa1296270:intron
GTAATTGTAATTGAGCTACC+TGG 0.585247 8_3:+55375506 None:intergenic
GTAACAGTAGAGCTCGAGAA+TGG 0.588608 8_3:-55378734 Msa1296270:CDS
TTAAGGTTGATTCAGCCCTA+AGG 0.588701 8_3:-55376933 Msa1296270:CDS
CTTAGGGTGCTTGTAGCAGG+TGG 0.590907 8_3:-55380234 Msa1296270:CDS
CTTCTCCAACTGCACGAGCA+AGG 0.592599 8_3:+55378944 None:intergenic
ATGCAGCCAAATATGGGCCA+AGG 0.593328 8_3:-55377592 Msa1296270:CDS
TGATACATTCACTCCTGCAG+TGG 0.593617 8_3:-55379019 Msa1296270:CDS
GCTCGAATTTACTACAAGGA+TGG 0.596476 8_3:-55375363 Msa1296270:CDS
CCAACAGATTCAATGTCAGC+AGG 0.596818 8_3:+55378125 None:intergenic
AGTTGCAGTTATTCACGGGA+TGG 0.600750 8_3:-55376516 Msa1296270:CDS
TTCACTCCTGCAGTGGAACG+TGG 0.600761 8_3:-55379012 Msa1296270:CDS
GCGTTTCACAAAGAAGCTCC+CGG 0.600868 8_3:-55377911 Msa1296270:CDS
GTAACATAAGGTAGAAGCCA+TGG 0.601137 8_3:+55380476 None:intergenic
GGGAACAAAGTATTAAATCA+GGG 0.601894 8_3:-55376963 Msa1296270:CDS
GTGTCTTTATGTCTGATCAA+AGG 0.605084 8_3:+55380579 None:intergenic
TTCGGTTCATCAGCACCACC+GGG 0.607713 8_3:+55377893 None:intergenic
TATGGGCCAAGGAGGATGCA+TGG 0.608374 8_3:-55377581 Msa1296270:CDS
CAGAATGGCCTCTTCATCTG+TGG 0.611295 8_3:+55377696 None:intergenic
AAAGATTTGAGTGCTGTGAG+AGG 0.616999 8_3:-55380144 Msa1296270:CDS
AAGATCCAGCTCAACATAGA+CGG 0.617857 8_3:+55376251 None:intergenic
CAAACGGACAACTACGCCAA+TGG 0.618460 8_3:-55375947 Msa1296270:CDS
AATTACAATTACTTCACCCA+AGG 0.618949 8_3:-55375495 Msa1296270:intron
AAAGGAGTTGGACAATGCAT+GGG 0.620153 8_3:-55376983 Msa1296270:CDS
TAGGCATACCCGATTATGCA+GGG 0.621885 8_3:+55375710 None:intergenic
AGCAGATGGTATATGGTCCA+AGG 0.623032 8_3:-55378681 Msa1296270:intron
TTTGAGTGCTGTGAGAGGAG+AGG 0.624147 8_3:-55380139 Msa1296270:CDS
ATGTTGAGCTGGATCTTGGG+TGG 0.625265 8_3:-55376245 Msa1296270:CDS
GGACAGTTATCAACTTGCAA+AGG 0.630008 8_3:-55377001 Msa1296270:CDS
GTAGATGTCTCGTCGCAGAA+TGG 0.634257 8_3:+55377681 None:intergenic
AGGTTGATTCAGCCCTAAGG+AGG 0.635267 8_3:-55376930 Msa1296270:intron
TTGGAGGCGGAAAGATGCAA+TGG 0.637314 8_3:-55377937 Msa1296270:CDS
CAGGAGTGCAGTGCAAGAGG+GGG 0.641480 8_3:-55375531 Msa1296270:CDS
ATCCTGGAAGAGTTGGAGGG+AGG 0.647436 8_3:-55376295 Msa1296270:CDS
CATATGGGTGGACACGAGCA+GGG 0.647782 8_3:+55375162 None:intergenic
AAGCCAGCCCAAATATCCAA+AGG 0.649772 8_3:+55374607 None:intergenic
CAGCCAAATATGGGCCAAGG+AGG 0.650204 8_3:-55377589 Msa1296270:CDS
GCACCACCTTCTTCAAAACA+AGG 0.651636 8_3:-55380270 Msa1296270:CDS
TTAGCCGAATGACTTTGCAA+GGG 0.653020 8_3:-55378969 Msa1296270:CDS
ACATGCTCGAATTTACTACA+AGG 0.653229 8_3:-55375367 Msa1296270:CDS
CTCATCCTGGAAGAGTTGGA+GGG 0.658752 8_3:-55376298 Msa1296270:CDS
ACTGAAGAACATCATATGGG+TGG 0.662504 8_3:+55375150 None:intergenic
CCTTCTTCGTAACTGATATG+CGG 0.673143 8_3:-55375338 Msa1296270:CDS
AGACCTGTTTCCTCTCCACA+TGG 0.688935 8_3:+55375770 None:intergenic
AGAATACCGACATTTAAATG+GGG 0.702793 8_3:-55377655 Msa1296270:CDS
TTTCACAAAGAAGCTCCCGG+TGG 0.766189 8_3:-55377908 Msa1296270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAATTTTGTACTAATTT+TGG - chr8_3:55375232-55375251 Msa1296270:intron 10.0%
!! ATTATTTATAGGTTTATTAA+AGG - chr8_3:55375400-55375419 Msa1296270:intron 10.0%
!! AAAAAAATAAAAATTATAGG+AGG - chr8_3:55375580-55375599 Msa1296270:intron 10.0%
!!! AAATTTTACAAATATATTAG+AGG - chr8_3:55378750-55378769 Msa1296270:intron 10.0%
!!! AATTTTACAAATATATTAGA+GGG - chr8_3:55378751-55378770 Msa1296270:intron 10.0%
!!! TTATTTTTTTTGTGTAAACA+GGG + chr8_3:55375570-55375589 None:intergenic 15.0%
!!! TTTATTTTTTTTGTGTAAAC+AGG + chr8_3:55375571-55375590 None:intergenic 15.0%
!! ACAATGATTGAAAAAATTAA+AGG + chr8_3:55377803-55377822 None:intergenic 15.0%
!!! TCATTTTTTCAAATTATTAC+CGG - chr8_3:55378426-55378445 Msa1296270:intron 15.0%
!! AATAATGATAGTTTAACTAT+TGG + chr8_3:55378521-55378540 None:intergenic 15.0%
!! AATAAATTTCTATTAGCATT+CGG + chr8_3:55379183-55379202 None:intergenic 15.0%
!! AATTTATTTATTTATTACGC+AGG - chr8_3:55379195-55379214 Msa1296270:intron 15.0%
!! TTTAATTGTGATTTACAAAA+TGG - chr8_3:55380476-55380495 Msa1296270:CDS 15.0%
!!! TCTTTAATATTTTTTTGATC+TGG + chr8_3:55380730-55380749 None:intergenic 15.0%
!! AGGGAAATTATTATTATTAG+AGG + chr8_3:55374429-55374448 None:intergenic 20.0%
!! TTGGTTTATTTGATGTTATT+TGG - chr8_3:55375251-55375270 Msa1296270:intron 20.0%
!! TATTTGGTATTTCAGTTTAT+TGG - chr8_3:55375267-55375286 Msa1296270:intron 20.0%
!! TTAGAACAAATATTTAAGAG+TGG + chr8_3:55375611-55375630 None:intergenic 20.0%
!! AACACAAGATAAAATAAAGT+CGG + chr8_3:55376844-55376863 None:intergenic 20.0%
!! ATTAATCTGTTTATCAAAAC+AGG - chr8_3:55376907-55376926 Msa1296270:intron 20.0%
!! AAAAGAATACAGTAACATTA+AGG + chr8_3:55376934-55376953 None:intergenic 20.0%
!! GAATTAAGAGATTAATATGA+TGG + chr8_3:55377369-55377388 None:intergenic 20.0%
!!! TTTTTCAATCATTGTTTTCT+TGG - chr8_3:55377808-55377827 Msa1296270:intron 20.0%
!!! AACTTTGTTTCTCTAAAAAA+AGG - chr8_3:55377850-55377869 Msa1296270:intron 20.0%
!!! ACTTTGTTTCTCTAAAAAAA+GGG - chr8_3:55377851-55377870 Msa1296270:intron 20.0%
!!! TATCAAATTTGAAAAGCATA+AGG + chr8_3:55378268-55378287 None:intergenic 20.0%
!!! AACTATCATTATTTTCGAAT+AGG - chr8_3:55378528-55378547 Msa1296270:intron 20.0%
!!! CACAATTTTACATTTCATTA+TGG + chr8_3:55378973-55378992 None:intergenic 20.0%
!!! TGAACAATGATTTTACTTTT+TGG - chr8_3:55379505-55379524 Msa1296270:intron 20.0%
!! GATATTGAAAAAATTAAGCA+GGG + chr8_3:55379732-55379751 None:intergenic 20.0%
!! TGATATTGAAAAAATTAAGC+AGG + chr8_3:55379733-55379752 None:intergenic 20.0%
!!! TCAGGATATTTTACAATATT+GGG - chr8_3:55380334-55380353 Msa1296270:CDS 20.0%
!!! AAGTCATATTTTACATGAAT+GGG + chr8_3:55380384-55380403 None:intergenic 20.0%
!!! TAAGTCATATTTTACATGAA+TGG + chr8_3:55380385-55380404 None:intergenic 20.0%
!!! ATAAACTTTCACATTTTGAA+TGG - chr8_3:55380406-55380425 Msa1296270:CDS 20.0%
! ATTCAATGAGTTGTAACATA+AGG + chr8_3:55374704-55374723 None:intergenic 25.0%
!! AATGAAAAGTCTTTGTTTGT+GGG + chr8_3:55374766-55374785 None:intergenic 25.0%
! ATTACTGGTGATAGAATTAA+TGG - chr8_3:55375147-55375166 Msa1296270:CDS 25.0%
!!! GTTAGAGGAGTATTATTTAT+AGG - chr8_3:55375389-55375408 Msa1296270:intron 25.0%
! AACAAATATTTAAGAGTGGA+GGG + chr8_3:55375607-55375626 None:intergenic 25.0%
!! ATAGTTGATATTATCCTCTT+TGG - chr8_3:55375916-55375935 Msa1296270:CDS 25.0%
! ACATGCTAAAATTGTAAACA+TGG + chr8_3:55375960-55375979 None:intergenic 25.0%
! GTGTTAATACAACTTTAACT+AGG + chr8_3:55375996-55376015 None:intergenic 25.0%
! AGGAAATTTCTGATAAAGAA+AGG + chr8_3:55376062-55376081 None:intergenic 25.0%
! GCAAATTAGATATCAATTCA+TGG + chr8_3:55376108-55376127 None:intergenic 25.0%
!!! TTGATATCTAATTTGCTATC+AGG - chr8_3:55376112-55376131 Msa1296270:CDS 25.0%
!!! TGAAATCAAAAAGCATTATG+AGG + chr8_3:55376410-55376429 None:intergenic 25.0%
!!! TCATAATGCTTTTTGATTTC+AGG - chr8_3:55376409-55376428 Msa1296270:intron 25.0%
!! TTTTATGTCATTCTGTTTGT+AGG - chr8_3:55376616-55376635 Msa1296270:intron 25.0%
!! TACTGTATTCTTTTGTGAAT+AGG - chr8_3:55376940-55376959 Msa1296270:CDS 25.0%
! AAATACGGATACAAAACTAA+TGG + chr8_3:55377075-55377094 None:intergenic 25.0%
! CCAAAGAAAATGGATAAATA+CGG + chr8_3:55377090-55377109 None:intergenic 25.0%
! TAAATATACGCCAAAGAAAA+TGG + chr8_3:55377100-55377119 None:intergenic 25.0%
!! AGCTTACTTAAACTTTTCTT+TGG - chr8_3:55377154-55377173 Msa1296270:intron 25.0%
!! GCTTACTTAAACTTTTCTTT+GGG - chr8_3:55377155-55377174 Msa1296270:intron 25.0%
! CACTAAAAATGCATACTATT+CGG + chr8_3:55377293-55377312 None:intergenic 25.0%
! TTTATGCATTGCAGAAAAAA+AGG - chr8_3:55377389-55377408 Msa1296270:intron 25.0%
! AAGAGAAATATATACCTCAA+TGG + chr8_3:55377610-55377629 None:intergenic 25.0%
! ACAAACTTGATATGTACATT+AGG + chr8_3:55377725-55377744 None:intergenic 25.0%
!! CTTTGTTTCTCTAAAAAAAG+GGG - chr8_3:55377852-55377871 Msa1296270:intron 25.0%
! ATTAATTAAAGTGGCACTAA+TGG - chr8_3:55377890-55377909 Msa1296270:intron 25.0%
! AAAGAAGCTTAAGTTAGAAA+GGG + chr8_3:55378129-55378148 None:intergenic 25.0%
! AAAAGAAGCTTAAGTTAGAA+AGG + chr8_3:55378130-55378149 None:intergenic 25.0%
!!! TTCTTTTTTTTCATCGTTAC+AGG - chr8_3:55378143-55378162 Msa1296270:intron 25.0%
! ATGATTAATGTGATCTATGA+AGG + chr8_3:55378497-55378516 None:intergenic 25.0%
!!! TATTTTCGAATAGGTTGATT+TGG - chr8_3:55378537-55378556 Msa1296270:intron 25.0%
! AAAAACTGAAGAGAAAGAAA+AGG + chr8_3:55378830-55378849 None:intergenic 25.0%
! TGATGATACTTGAACATATT+TGG + chr8_3:55379297-55379316 None:intergenic 25.0%
! GAAAGATGGACATAAAAATT+AGG + chr8_3:55379350-55379369 None:intergenic 25.0%
!! TCATTTTGTGTTAAACGTAT+CGG + chr8_3:55379428-55379447 None:intergenic 25.0%
! ATCATTGTTCATGTTTCAAA+AGG + chr8_3:55379496-55379515 None:intergenic 25.0%
! TGATATATTTGTGTAATTGC+AGG - chr8_3:55379615-55379634 Msa1296270:intron 25.0%
!!! AACAATCTCTCTCTTTTTTA+AGG - chr8_3:55379765-55379784 Msa1296270:intron 25.0%
! GAGTAAGTAAAATAAATGGA+AGG - chr8_3:55379874-55379893 Msa1296270:intron 25.0%
! AGACATAGTGGTAATTTATA+TGG - chr8_3:55380104-55380123 Msa1296270:CDS 25.0%
!! GTCAGGATATTTTACAATAT+TGG - chr8_3:55380333-55380352 Msa1296270:CDS 25.0%
! TTAGCACCATTATTAATGAA+TGG - chr8_3:55380579-55380598 Msa1296270:five_prime_UTR 25.0%
! CTAGAACCATTCATTAATAA+TGG + chr8_3:55380588-55380607 None:intergenic 25.0%
! CATGATATTTACTTGAGTAA+GGG - chr8_3:55380660-55380679 Msa1296270:five_prime_UTR 25.0%
! ATGATATTTACTTGAGTAAG+GGG - chr8_3:55380661-55380680 Msa1296270:five_prime_UTR 25.0%
!! GTGTTTGTTCTTGGTTTTTA+AGG - chr8_3:55374646-55374665 Msa1296270:three_prime_UTR 30.0%
! CAATGAAAAGTCTTTGTTTG+TGG + chr8_3:55374767-55374786 None:intergenic 30.0%
! CACAAACAAAGACTTTTCAT+TGG - chr8_3:55374765-55374784 Msa1296270:three_prime_UTR 30.0%
! ACTTCATCTTTTCATAGCTA+TGG - chr8_3:55374793-55374812 Msa1296270:three_prime_UTR 30.0%
AAAACAGAGCAAAAAAACAG+AGG - chr8_3:55374818-55374837 Msa1296270:three_prime_UTR 30.0%
!! AGAATTAATGGTCTTGTTGA+TGG - chr8_3:55375159-55375178 Msa1296270:CDS 30.0%
CTTCTAAATGTTTACACTTG+AGG + chr8_3:55375306-55375325 None:intergenic 30.0%
AAGTATCTAAGTCTTTGAGT+TGG - chr8_3:55375353-55375372 Msa1296270:CDS 30.0%
GAACAAATATTTAAGAGTGG+AGG + chr8_3:55375608-55375627 None:intergenic 30.0%
AGTTGAAACTAAGTTCTCAA+TGG + chr8_3:55375642-55375661 None:intergenic 30.0%
GAGGATAATATCAACTATGA+AGG + chr8_3:55375914-55375933 None:intergenic 30.0%
TTGATATTATCCTCTTTGGT+CGG - chr8_3:55375920-55375939 Msa1296270:CDS 30.0%
TAACCAATCCGATTAGAAAA+GGG + chr8_3:55376020-55376039 None:intergenic 30.0%
ATAACCAATCCGATTAGAAA+AGG + chr8_3:55376021-55376040 None:intergenic 30.0%
CATTCTTCTTGAATATGCAT+TGG - chr8_3:55376338-55376357 Msa1296270:intron 30.0%
GAGAATGGTCAAAAATATGA+AGG - chr8_3:55376446-55376465 Msa1296270:intron 30.0%
AAAATATGAAGGAGACCTAT+TGG - chr8_3:55376457-55376476 Msa1296270:CDS 30.0%
AAGAAAAGTTAACAAGACCT+TGG + chr8_3:55376504-55376523 None:intergenic 30.0%
CATTGCAAAATACGTTACAA+TGG - chr8_3:55376553-55376572 Msa1296270:intron 30.0%
ATAAATTCTGCACTTAGAGT+CGG - chr8_3:55376653-55376672 Msa1296270:intron 30.0%
! TATTCTTTTGTGAATAGGTC+AGG - chr8_3:55376945-55376964 Msa1296270:CDS 30.0%
! CCGTATTTATCCATTTTCTT+TGG - chr8_3:55377087-55377106 Msa1296270:intron 30.0%
!! ACTTAAACTTTTCTTTGGGA+AGG - chr8_3:55377159-55377178 Msa1296270:intron 30.0%
TACTTTGTATCTTCAGATGT+TGG - chr8_3:55377209-55377228 Msa1296270:intron 30.0%
AAGGTTGCTCAAGATATTTA+AGG - chr8_3:55377413-55377432 Msa1296270:intron 30.0%
AGGTTGCTCAAGATATTTAA+GGG - chr8_3:55377414-55377433 Msa1296270:intron 30.0%
ACAGAATACCGACATTTAAA+TGG - chr8_3:55377508-55377527 Msa1296270:intron 30.0%
CAGAATACCGACATTTAAAT+GGG - chr8_3:55377509-55377528 Msa1296270:intron 30.0%
AGAATACCGACATTTAAATG+GGG - chr8_3:55377510-55377529 Msa1296270:intron 30.0%
ACATTAGGTCTGAAAAATGT+AGG + chr8_3:55377710-55377729 None:intergenic 30.0%
! TTTCTCTAAAAAAAGGGGAA+TGG - chr8_3:55377857-55377876 Msa1296270:intron 30.0%
! TTCTCTAAAAAAAGGGGAAT+GGG - chr8_3:55377858-55377877 Msa1296270:intron 30.0%
! TTTTCTGCATTAAGAGAAGA+TGG - chr8_3:55378048-55378067 Msa1296270:intron 30.0%
! TGGGAACAAAGTATTAAATC+AGG - chr8_3:55378201-55378220 Msa1296270:intron 30.0%
! GGGAACAAAGTATTAAATCA+GGG - chr8_3:55378202-55378221 Msa1296270:intron 30.0%
TTTCAAATTATTACCGGTGT+CGG - chr8_3:55378432-55378451 Msa1296270:intron 30.0%
ATTTGGTATTCTCTTTGATG+AGG - chr8_3:55378554-55378573 Msa1296270:intron 30.0%
! TTTTCTTTCACTTTCATAGC+TGG + chr8_3:55378624-55378643 None:intergenic 30.0%
GAAAGAAAAGGTGGATATTT+CGG + chr8_3:55378818-55378837 None:intergenic 30.0%
TTATTTATTACGCAGGCAAA+CGG - chr8_3:55379202-55379221 Msa1296270:intron 30.0%
TCCATCTTTCGTTGAATTAT+AGG - chr8_3:55379360-55379379 Msa1296270:intron 30.0%
ACCTATAATTCAACGAAAGA+TGG + chr8_3:55379364-55379383 None:intergenic 30.0%
ATCTTTCGTTGAATTATAGG+TGG - chr8_3:55379363-55379382 Msa1296270:intron 30.0%
AATTACAATTACTTCACCCA+AGG - chr8_3:55379670-55379689 Msa1296270:intron 30.0%
GTGATAAATTGTTCTACCTT+GGG + chr8_3:55379689-55379708 None:intergenic 30.0%
CGCTGAGTAAGTAAAATAAA+TGG - chr8_3:55379870-55379889 Msa1296270:intron 30.0%
! CTATATGTTTGCAGTATTGA+AGG - chr8_3:55379953-55379972 Msa1296270:intron 30.0%
CAAACTGAAGAACATCATAT+GGG + chr8_3:55380021-55380040 None:intergenic 30.0%
! ACTTTTCACATTAGACATAG+TGG - chr8_3:55380092-55380111 Msa1296270:CDS 30.0%
AATGAAACCTGCAAATAACT+CGG + chr8_3:55380151-55380170 None:intergenic 30.0%
AGCATTATCTGCAATCTTAT+AGG - chr8_3:55380310-55380329 Msa1296270:CDS 30.0%
GCATTATCTGCAATCTTATA+GGG - chr8_3:55380311-55380330 Msa1296270:CDS 30.0%
TTTCTCATCCTTTGGATATT+TGG - chr8_3:55380550-55380569 Msa1296270:five_prime_UTR 30.0%
TTCTCATCCTTTGGATATTT+GGG - chr8_3:55380551-55380570 Msa1296270:five_prime_UTR 30.0%
ATGACCATTTGATAGATCTT+AGG - chr8_3:55380636-55380655 Msa1296270:five_prime_UTR 30.0%
CCTTACTCAAGTAAATATCA+TGG + chr8_3:55380662-55380681 None:intergenic 30.0%
CCATGATATTTACTTGAGTA+AGG - chr8_3:55380659-55380678 Msa1296270:five_prime_UTR 30.0%
GTGTCTTTATGTCTGATCAA+AGG + chr8_3:55374589-55374608 None:intergenic 35.0%
AACGTGTTTGTGTTTGTTCT+TGG - chr8_3:55374637-55374656 Msa1296270:three_prime_UTR 35.0%
!!! GTGTTTTTTCAACTCAACCA+TGG - chr8_3:55374672-55374691 Msa1296270:three_prime_UTR 35.0%
GTTTGTGGGAATTGAGAAAA+GGG + chr8_3:55374752-55374771 None:intergenic 35.0%
TGTTTGTGGGAATTGAGAAA+AGG + chr8_3:55374753-55374772 None:intergenic 35.0%
!!! TTCTCACCTTGTTTTGAAGA+AGG + chr8_3:55374904-55374923 None:intergenic 35.0%
AAGGTGAGAAGAAGAATCTT+AGG - chr8_3:55374914-55374933 Msa1296270:three_prime_UTR 35.0%
AGGTGAGAAGAAGAATCTTA+GGG - chr8_3:55374915-55374934 Msa1296270:three_prime_UTR 35.0%
! GAGAAAAGGATTTGAAGTGA+TGG - chr8_3:55374990-55375009 Msa1296270:CDS 35.0%
GCATTACTCTGTATCTGAAT+AGG + chr8_3:55375066-55375085 None:intergenic 35.0%
TCAGATACAGAGTAATGCTT+TGG - chr8_3:55375068-55375087 Msa1296270:intron 35.0%
! ATGAGAGTTGGTTGTATTAC+TGG - chr8_3:55375132-55375151 Msa1296270:intron 35.0%
!! TATCTAAGTCTTTGAGTTGG+AGG - chr8_3:55375356-55375375 Msa1296270:CDS 35.0%
GCAGCAATGTTAAAACTCTT+AGG - chr8_3:55375472-55375491 Msa1296270:intron 35.0%
CAACTAGTGTTGTCAAATAG+TGG - chr8_3:55375657-55375676 Msa1296270:intron 35.0%
TGTTGTCAAATAGTGGCTAT+TGG - chr8_3:55375664-55375683 Msa1296270:intron 35.0%
ATATTCATCACAGCTAACGT+TGG - chr8_3:55375851-55375870 Msa1296270:intron 35.0%
TATTCATCACAGCTAACGTT+GGG - chr8_3:55375852-55375871 Msa1296270:intron 35.0%
!!! GACAGTTGGTTTTGATTAAC+CGG - chr8_3:55375874-55375893 Msa1296270:intron 35.0%
!! TTTTGATTAACCGGATGACA+TGG - chr8_3:55375883-55375902 Msa1296270:intron 35.0%
! TTAACACCCCCTTTTCTAAT+CGG - chr8_3:55376009-55376028 Msa1296270:intron 35.0%
AACCAATCCGATTAGAAAAG+GGG + chr8_3:55376019-55376038 None:intergenic 35.0%
CAAAGACTAACATCGAGTAA+AGG + chr8_3:55376082-55376101 None:intergenic 35.0%
!! CTTTACTCGATGTTAGTCTT+TGG - chr8_3:55376080-55376099 Msa1296270:intron 35.0%
TGCGAAATTAACGACATTAC+TGG + chr8_3:55376262-55376281 None:intergenic 35.0%
!! AAAAAGCATTATGAGGAGAG+TGG + chr8_3:55376403-55376422 None:intergenic 35.0%
GGTTTGGATTGACATATTTG+AGG - chr8_3:55376674-55376693 Msa1296270:intron 35.0%
TAAACACTTGTGGTACTGTT+CGG - chr8_3:55376710-55376729 Msa1296270:intron 35.0%
!! CTTATTTTCATACGCTCTCA+AGG - chr8_3:55376780-55376799 Msa1296270:intron 35.0%
GACACAGTTATTTGGACAAA+CGG - chr8_3:55376967-55376986 Msa1296270:CDS 35.0%
ATTGAATCTGTTGGGTATGT+GGG - chr8_3:55377049-55377068 Msa1296270:intron 35.0%
TTTGTATCTTCAGATGTTGG+AGG - chr8_3:55377212-55377231 Msa1296270:intron 35.0%
!! TCTTTTCATCCTTTGCTATG+TGG - chr8_3:55377331-55377350 Msa1296270:intron 35.0%
!! CTTTTCATCCTTTGCTATGT+GGG - chr8_3:55377332-55377351 Msa1296270:intron 35.0%
! AACTTTTACCCACATAGCAA+AGG + chr8_3:55377343-55377362 None:intergenic 35.0%
GCATTGCAGAAAAAAAGGAA+AGG - chr8_3:55377394-55377413 Msa1296270:intron 35.0%
ATAGTGAAGTCTGTAGAATC+TGG + chr8_3:55377749-55377768 None:intergenic 35.0%
TCTACAGACTTCACTATTTC+AGG - chr8_3:55377752-55377771 Msa1296270:CDS 35.0%
CTACAGACTTCACTATTTCA+GGG - chr8_3:55377753-55377772 Msa1296270:CDS 35.0%
! CAATCATTGTTTTCTTGGCT+AGG - chr8_3:55377813-55377832 Msa1296270:intron 35.0%
GGAGGAAATTCAAATACTCT+CGG + chr8_3:55377933-55377952 None:intergenic 35.0%
TTATCAACTTGCAAAGGAGT+TGG - chr8_3:55378170-55378189 Msa1296270:intron 35.0%
TAAATCAGGGAACCCAATTA+AGG - chr8_3:55378215-55378234 Msa1296270:intron 35.0%
TAAGGTATGTTACCTCCTTA+GGG + chr8_3:55378250-55378269 None:intergenic 35.0%
ATAAGGTATGTTACCTCCTT+AGG + chr8_3:55378251-55378270 None:intergenic 35.0%
! TTGACTTGATTTGAACTGAG+TGG - chr8_3:55378309-55378328 Msa1296270:intron 35.0%
CTTTCACAACCTATGAATCA+AGG - chr8_3:55378334-55378353 Msa1296270:intron 35.0%
TGGAAAAGGGAATAAAAGAG+AGG + chr8_3:55378592-55378611 None:intergenic 35.0%
! ATTTAAGTTCCTACCTCCAA+AGG + chr8_3:55378734-55378753 None:intergenic 35.0%
AACTGAAGAGAAAGAAAAGG+TGG + chr8_3:55378827-55378846 None:intergenic 35.0%
! TTTTGCAGTGACAAACTTGA+AGG - chr8_3:55379031-55379050 Msa1296270:CDS 35.0%
CATCATCATCTTCAAACCAT+TGG + chr8_3:55379237-55379256 None:intergenic 35.0%
! AGGTGGTTTTTATTACCATG+TGG - chr8_3:55379380-55379399 Msa1296270:intron 35.0%
! GTTTTTATTACCATGTGGAG+AGG - chr8_3:55379385-55379404 Msa1296270:intron 35.0%
GTAATTGTAATTGAGCTACC+TGG + chr8_3:55379662-55379681 None:intergenic 35.0%
CGTGATAAATTGTTCTACCT+TGG + chr8_3:55379690-55379709 None:intergenic 35.0%
ATCACGACCTGAATTAAACT+CGG - chr8_3:55379704-55379723 Msa1296270:intron 35.0%
TAGTAAATTCGAGCATGTGT+TGG + chr8_3:55379796-55379815 None:intergenic 35.0%
ACATGCTCGAATTTACTACA+AGG - chr8_3:55379798-55379817 Msa1296270:intron 35.0%
GTATTGAAGGAAAGCGATAT+CGG - chr8_3:55379966-55379985 Msa1296270:intron 35.0%
TATTGAAGGAAAGCGATATC+GGG - chr8_3:55379967-55379986 Msa1296270:intron 35.0%
CCAAACTGAAGAACATCATA+TGG + chr8_3:55380022-55380041 None:intergenic 35.0%
CCATATGATGTTCTTCAGTT+TGG - chr8_3:55380019-55380038 Msa1296270:CDS 35.0%
TCAACTTCTTTCTCATCCTT+TGG - chr8_3:55380542-55380561 Msa1296270:five_prime_UTR 35.0%
ATGGCCTAAGATCTATCAAA+TGG + chr8_3:55380643-55380662 None:intergenic 35.0%
GTAACATAAGGTAGAAGCCA+TGG + chr8_3:55374692-55374711 None:intergenic 40.0%
CTTGAGAATGATGCTGTAGA+TGG + chr8_3:55374727-55374746 None:intergenic 40.0%
!!! TCACCTTGTTTTGAAGAAGG+TGG + chr8_3:55374901-55374920 None:intergenic 40.0%
!!! TGGTGGATTGGTTTTTGCTT+TGG - chr8_3:55374960-55374979 Msa1296270:CDS 40.0%
! AAAGATTTGAGTGCTGTGAG+AGG - chr8_3:55375021-55375040 Msa1296270:intron 40.0%
GCTGATGAAGTTATGAGAGT+TGG - chr8_3:55375120-55375139 Msa1296270:intron 40.0%
!! TTGATGGAGTTTCTGGTTCT+TGG - chr8_3:55375175-55375194 Msa1296270:CDS 40.0%
!! GGAGGAGCATTTAAAGTTAG+AGG - chr8_3:55375374-55375393 Msa1296270:CDS 40.0%
TTAACATTGCTGCATGCTCA+AGG + chr8_3:55375465-55375484 None:intergenic 40.0%
ACCAATCCGATTAGAAAAGG+GGG + chr8_3:55376018-55376037 None:intergenic 40.0%
ATTAGCCGAATGACTTTGCA+AGG - chr8_3:55376195-55376214 Msa1296270:intron 40.0%
TTAGCCGAATGACTTTGCAA+GGG - chr8_3:55376196-55376215 Msa1296270:intron 40.0%
GTAAGGTAGGTAGAGAAGAA+TGG - chr8_3:55376292-55376311 Msa1296270:CDS 40.0%
TATGCATTGGAAGACTAACG+AGG - chr8_3:55376351-55376370 Msa1296270:intron 40.0%
CTAACGAGGTTTAGCATCAT+CGG - chr8_3:55376365-55376384 Msa1296270:intron 40.0%
TAACGAGGTTTAGCATCATC+GGG - chr8_3:55376366-55376385 Msa1296270:intron 40.0%
TATGAAGGAGACCTATTGGT+TGG - chr8_3:55376461-55376480 Msa1296270:CDS 40.0%
CCACAAGTGTTTATGTCAGT+AGG + chr8_3:55376703-55376722 None:intergenic 40.0%
CCTACTGACATAAACACTTG+TGG - chr8_3:55376700-55376719 Msa1296270:intron 40.0%
TAGGTCAGGACACAGTTATT+TGG - chr8_3:55376959-55376978 Msa1296270:CDS 40.0%
ACCGGTATAACAAGTATAGC+CGG + chr8_3:55377005-55377024 None:intergenic 40.0%
AGGCACAAAATCTGCAATAC+CGG + chr8_3:55377023-55377042 None:intergenic 40.0%
CTGCTGACATTGAATCTGTT+GGG - chr8_3:55377041-55377060 Msa1296270:intron 40.0%
CATTGAATCTGTTGGGTATG+TGG - chr8_3:55377048-55377067 Msa1296270:intron 40.0%
GTTTGTGTCCCAAGAATACT+CGG + chr8_3:55377187-55377206 None:intergenic 40.0%
TGCTCAAGATATTTAAGGGC+TGG - chr8_3:55377418-55377437 Msa1296270:intron 40.0%
ACCGACATTTAAATGGGGAA+AGG - chr8_3:55377515-55377534 Msa1296270:intron 40.0%
CCCTTTCCCCATTTAAATGT+CGG + chr8_3:55377519-55377538 None:intergenic 40.0%
CCGACATTTAAATGGGGAAA+GGG - chr8_3:55377516-55377535 Msa1296270:intron 40.0%
TATTTGAATTTCCTCCCTCG+AGG - chr8_3:55377937-55377956 Msa1296270:CDS 40.0%
!!! TTTTGACTTTGCAACCTCGA+GGG + chr8_3:55377954-55377973 None:intergenic 40.0%
!!! ATTTTGACTTTGCAACCTCG+AGG + chr8_3:55377955-55377974 None:intergenic 40.0%
ACCAATGAGCTTACACCTAA+CGG - chr8_3:55377978-55377997 Msa1296270:CDS 40.0%
GGACAGTTATCAACTTGCAA+AGG - chr8_3:55378164-55378183 Msa1296270:intron 40.0%
AAAGGAGTTGGACAATGCAT+GGG - chr8_3:55378182-55378201 Msa1296270:intron 40.0%
GGGCTGAATCAACCTTAATT+GGG + chr8_3:55378230-55378249 None:intergenic 40.0%
AGGGCTGAATCAACCTTAAT+TGG + chr8_3:55378231-55378250 None:intergenic 40.0%
! TTAAGGTTGATTCAGCCCTA+AGG - chr8_3:55378232-55378251 Msa1296270:intron 40.0%
! GTGAAGTGTCCTTGATTCAT+AGG + chr8_3:55378346-55378365 None:intergenic 40.0%
ATTGACAGAGACGTGAACAA+TGG + chr8_3:55378474-55378493 None:intergenic 40.0%
CTCTTTGATGAGGTGACTAA+TGG - chr8_3:55378564-55378583 Msa1296270:intron 40.0%
!! CTGGAAGCATTCATGGAAAA+GGG + chr8_3:55378605-55378624 None:intergenic 40.0%
!! TTCATAGCTGGAAGCATTCA+TGG + chr8_3:55378612-55378631 None:intergenic 40.0%
TCCACTTACAAGGCATATCT+AGG - chr8_3:55378695-55378714 Msa1296270:CDS 40.0%
ACCTAGATATGCCTTGTAAG+TGG + chr8_3:55378699-55378718 None:intergenic 40.0%
TACAAGGCATATCTAGGTGT+TGG - chr8_3:55378701-55378720 Msa1296270:CDS 40.0%
AAGATCCAGCTCAACATAGA+CGG + chr8_3:55378917-55378936 None:intergenic 40.0%
TCTATGTTGAGCTGGATCTT+GGG - chr8_3:55378917-55378936 Msa1296270:CDS 40.0%
ATCTTGGGTGGAAATAGGTA+AGG - chr8_3:55378932-55378951 Msa1296270:CDS 40.0%
AAGGTAGACCAATAAGTTGC+AGG - chr8_3:55379050-55379069 Msa1296270:intron 40.0%
GAGATGAAACCCTGCATAAT+CGG - chr8_3:55379446-55379465 Msa1296270:intron 40.0%
AGATGAAACCCTGCATAATC+GGG - chr8_3:55379447-55379466 Msa1296270:intron 40.0%
AAGGCACAACTGTAATCAGT+AGG + chr8_3:55379477-55379496 None:intergenic 40.0%
AGGGAACAATGCACACTAAA+TGG + chr8_3:55379534-55379553 None:intergenic 40.0%
TGCATTGTTCCCTTCTCAAT+TGG - chr8_3:55379541-55379560 Msa1296270:intron 40.0%
GCTCGAATTTACTACAAGGA+TGG - chr8_3:55379802-55379821 Msa1296270:intron 40.0%
CCTTCTTCGTAACTGATATG+CGG - chr8_3:55379827-55379846 Msa1296270:intron 40.0%
ACTGAAGAACATCATATGGG+TGG + chr8_3:55380018-55380037 None:intergenic 40.0%
!! TCTTCAGTTTGGTTCTGAGA+AGG - chr8_3:55380030-55380049 Msa1296270:CDS 40.0%
!! GCAGGTTTCATTTCGAGTTA+AGG - chr8_3:55380159-55380178 Msa1296270:CDS 40.0%
ATCTGCAATCTTATAGGGTC+AGG - chr8_3:55380316-55380335 Msa1296270:CDS 40.0%
! CATTTTGAATGGAGTGACCA+TGG - chr8_3:55380417-55380436 Msa1296270:CDS 40.0%
GCACCACCTTCTTCAAAACA+AGG - chr8_3:55374895-55374914 Msa1296270:three_prime_UTR 45.0%
! AATCTTAGGGTGCTTGTAGC+AGG - chr8_3:55374928-55374947 Msa1296270:exon 45.0%
GCTTTGGCTGCAAAGAGAAA+AGG - chr8_3:55374976-55374995 Msa1296270:CDS 45.0%
GAGTAATGCTTTGGCTGCTT+TGG - chr8_3:55375077-55375096 Msa1296270:intron 45.0%
!! GGTCTTGTTGATGGAGTTTC+TGG - chr8_3:55375168-55375187 Msa1296270:CDS 45.0%
AAGGACCTTGGCTAAGCAAA+GGG + chr8_3:55375430-55375449 None:intergenic 45.0%
! ACTAATCTCTCGAGCCTTGT+GGG + chr8_3:55375521-55375540 None:intergenic 45.0%
TCGCAGATCACGGAAAATAG+CGG + chr8_3:55375803-55375822 None:intergenic 45.0%
GTGTTGTCAATCGCAGATCA+CGG + chr8_3:55375813-55375832 None:intergenic 45.0%
TGATCTGCGATTGACAACAC+TGG - chr8_3:55375813-55375832 Msa1296270:intron 45.0%
TATTATCCTCTTTGGTCGGC+TGG - chr8_3:55375924-55375943 Msa1296270:CDS 45.0%
! ACCCCCTTTTCTAATCGGAT+TGG - chr8_3:55376014-55376033 Msa1296270:intron 45.0%
TGATACATTCACTCCTGCAG+TGG - chr8_3:55376146-55376165 Msa1296270:intron 45.0%
CGGCTAATAACTCTTGTGAC+CGG + chr8_3:55376183-55376202 None:intergenic 45.0%
GGATCCCTTGCAAAGTCATT+CGG + chr8_3:55376203-55376222 None:intergenic 45.0%
GTCGTTAATTTCGCAGACGA+TGG - chr8_3:55376267-55376286 Msa1296270:CDS 45.0%
TTTCGCAGACGATGGAAGTA+AGG - chr8_3:55376275-55376294 Msa1296270:CDS 45.0%
GTAACAGTAGAGCTCGAGAA+TGG - chr8_3:55376431-55376450 Msa1296270:intron 45.0%
TACCATCTGCTCCAACCAAT+AGG + chr8_3:55376475-55376494 None:intergenic 45.0%
TGGTTGGAGCAGATGGTATA+TGG - chr8_3:55376477-55376496 Msa1296270:CDS 45.0%
AGCAGATGGTATATGGTCCA+AGG - chr8_3:55376484-55376503 Msa1296270:CDS 45.0%
TTCTGCACTTAGAGTCGGTT+TGG - chr8_3:55376658-55376677 Msa1296270:intron 45.0%
!! GCCGGCTATACTTGTTATAC+CGG - chr8_3:55377001-55377020 Msa1296270:CDS 45.0%
CCAACAGATTCAATGTCAGC+AGG + chr8_3:55377043-55377062 None:intergenic 45.0%
CCTGCTGACATTGAATCTGT+TGG - chr8_3:55377040-55377059 Msa1296270:intron 45.0%
!! GGAAGGTACCGAGTATTCTT+GGG - chr8_3:55377176-55377195 Msa1296270:intron 45.0%
GTATCTTCAGATGTTGGAGG+CGG - chr8_3:55377215-55377234 Msa1296270:intron 45.0%
CATACTTGCCACAGATGAAG+AGG - chr8_3:55377461-55377480 Msa1296270:intron 45.0%
!! AAGGGTCGTGTTACTTTGCT+TGG - chr8_3:55377534-55377553 Msa1296270:intron 45.0%
CATGCCATGCAGCCAAATAT+GGG - chr8_3:55377567-55377586 Msa1296270:intron 45.0%
TCCGTTAGGTGTAAGCTCAT+TGG + chr8_3:55377982-55378001 None:intergenic 45.0%
TGAGCTTACACCTAACGGAA+TGG - chr8_3:55377983-55378002 Msa1296270:CDS 45.0%
TCTGAATCCACCATTCCGTT+AGG + chr8_3:55377996-55378015 None:intergenic 45.0%
CAAAGGAGTTGGACAATGCA+TGG - chr8_3:55378181-55378200 Msa1296270:intron 45.0%
AGAGACGTGAACAATGGACA+AGG + chr8_3:55378468-55378487 None:intergenic 45.0%
!! GCTGGAAGCATTCATGGAAA+AGG + chr8_3:55378606-55378625 None:intergenic 45.0%
CTGCGAGTTGCAGTTATTCA+CGG - chr8_3:55378644-55378663 Msa1296270:intron 45.0%
TGCGAGTTGCAGTTATTCAC+GGG - chr8_3:55378645-55378664 Msa1296270:intron 45.0%
AGTTGCAGTTATTCACGGGA+TGG - chr8_3:55378649-55378668 Msa1296270:intron 45.0%
TATTCACGGGATGGCTAGAA+TGG - chr8_3:55378658-55378677 Msa1296270:intron 45.0%
TCTGATGGCTTCCACTTACA+AGG - chr8_3:55378685-55378704 Msa1296270:CDS 45.0%
!! GCATATCTAGGTGTTGGTCT+TGG - chr8_3:55378707-55378726 Msa1296270:CDS 45.0%
AGGATGAGGTATGCGAAAGT+TGG + chr8_3:55378855-55378874 None:intergenic 45.0%
AACTTTCGCATACCTCATCC+TGG - chr8_3:55378854-55378873 Msa1296270:intron 45.0%
ATACCTCATCCTGGAAGAGT+TGG - chr8_3:55378863-55378882 Msa1296270:intron 45.0%
GTCTATGTTGAGCTGGATCT+TGG - chr8_3:55378916-55378935 Msa1296270:CDS 45.0%
ACCAATAAGTTGCAGGCTCT+CGG - chr8_3:55379057-55379076 Msa1296270:intron 45.0%
! GCACTTGAGCGTGCTATTAA+CGG - chr8_3:55379256-55379275 Msa1296270:intron 45.0%
TTACCATGTGGAGAGGAAAC+AGG - chr8_3:55379392-55379411 Msa1296270:intron 45.0%
TAGGCATACCCGATTATGCA+GGG + chr8_3:55379458-55379477 None:intergenic 45.0%
CAGGGAACCGAGTTTAATTC+AGG + chr8_3:55379714-55379733 None:intergenic 45.0%
CCGCATATCAGTTACGAAGA+AGG + chr8_3:55379830-55379849 None:intergenic 45.0%
GTAGCATCCGAGTTATTTGC+AGG - chr8_3:55380141-55380160 Msa1296270:CDS 45.0%
!! ACATGAATGGGAGTGCTTGT+AGG + chr8_3:55380372-55380391 None:intergenic 45.0%
TTGAATGGAGTGACCATGGA+AGG - chr8_3:55380421-55380440 Msa1296270:CDS 45.0%
CATCCTTTGGATATTTGGGC+TGG - chr8_3:55380555-55380574 Msa1296270:five_prime_UTR 45.0%
AAGCCAGCCCAAATATCCAA+AGG + chr8_3:55380561-55380580 None:intergenic 45.0%
!! TTATTGTAAAATAAATTAAA+GGG + chr8_3:55374448-55374467 None:intergenic 5.0%
!! ATTATTGTAAAATAAATTAA+AGG + chr8_3:55374449-55374468 None:intergenic 5.0%
!! ACAAAAAAAATAAAAATTAT+AGG - chr8_3:55375577-55375596 Msa1296270:intron 5.0%
!! AATATTATTATTAATTAAAG+TGG - chr8_3:55377881-55377900 Msa1296270:intron 5.0%
!! CTTGTAGCAGGTGGTGGAAT+TGG - chr8_3:55374940-55374959 Msa1296270:exon 50.0%
!! AGGTGGTGGAATTGGTGGAT+TGG - chr8_3:55374948-55374967 Msa1296270:CDS 50.0%
! TTTGAGTGCTGTGAGAGGAG+AGG - chr8_3:55375026-55375045 Msa1296270:intron 50.0%
! TTGAGTGCTGTGAGAGGAGA+GGG - chr8_3:55375027-55375046 Msa1296270:intron 50.0%
AGAGGAGAGGGACAGTATAG+AGG - chr8_3:55375039-55375058 Msa1296270:intron 50.0%
CAAGGACCTTGGCTAAGCAA+AGG + chr8_3:55375431-55375450 None:intergenic 50.0%
CTTTGCTTAGCCAAGGTCCT+TGG - chr8_3:55375429-55375448 Msa1296270:intron 50.0%
TTGGATCGAACCAAGGACCT+TGG + chr8_3:55375442-55375461 None:intergenic 50.0%
CTCAAGGTTGGATCGAACCA+AGG + chr8_3:55375449-55375468 None:intergenic 50.0%
CATTGCTGCATGCTCAAGGT+TGG + chr8_3:55375461-55375480 None:intergenic 50.0%
GCAGAGTTTGCCGCCTATTT+GGG - chr8_3:55375494-55375513 Msa1296270:intron 50.0%
GACTAATCTCTCGAGCCTTG+TGG + chr8_3:55375522-55375541 None:intergenic 50.0%
ACAGCTAACGTTGGGACAGT+TGG - chr8_3:55375860-55375879 Msa1296270:intron 50.0%
GAAGGCGAAACCATGTCATC+CGG + chr8_3:55375896-55375915 None:intergenic 50.0%
GCAGACGATGGAAGTAAGGT+AGG - chr8_3:55376279-55376298 Msa1296270:CDS 50.0%
! GACCTATTGGTTGGAGCAGA+TGG - chr8_3:55376470-55376489 Msa1296270:CDS 50.0%
CAAACGGAAGCTGTTTACGC+CGG - chr8_3:55376983-55377002 Msa1296270:CDS 50.0%
!! GGGAAGGTACCGAGTATTCT+TGG - chr8_3:55377175-55377194 Msa1296270:intron 50.0%
TTGGAGGCGGAAAGATGCAA+TGG - chr8_3:55377228-55377247 Msa1296270:intron 50.0%
GCGTTTCACAAAGAAGCTCC+CGG - chr8_3:55377254-55377273 Msa1296270:intron 50.0%
TTTCACAAAGAAGCTCCCGG+TGG - chr8_3:55377257-55377276 Msa1296270:intron 50.0%
ATTCGGTTCATCAGCACCAC+CGG + chr8_3:55377276-55377295 None:intergenic 50.0%
CAGAATGGCCTCTTCATCTG+TGG + chr8_3:55377472-55377491 None:intergenic 50.0%
GTAGATGTCTCGTCGCAGAA+TGG + chr8_3:55377487-55377506 None:intergenic 50.0%
CCATATTTGGCTGCATGGCA+TGG + chr8_3:55377569-55377588 None:intergenic 50.0%
CCATGCCATGCAGCCAAATA+TGG - chr8_3:55377566-55377585 Msa1296270:intron 50.0%
TTGGCCCATATTTGGCTGCA+TGG + chr8_3:55377574-55377593 None:intergenic 50.0%
ATGCAGCCAAATATGGGCCA+AGG - chr8_3:55377573-55377592 Msa1296270:CDS 50.0%
CATCCTCCTTGGCCCATATT+TGG + chr8_3:55377582-55377601 None:intergenic 50.0%
! ACGAGACATGATGACGACTC+AGG + chr8_3:55377642-55377661 None:intergenic 50.0%
GCTTACACCTAACGGAATGG+TGG - chr8_3:55377986-55378005 Msa1296270:CDS 50.0%
! AGGTTGATTCAGCCCTAAGG+AGG - chr8_3:55378235-55378254 Msa1296270:intron 50.0%
TCTAGTGTCTGACACGACAC+TGG - chr8_3:55378378-55378397 Msa1296270:intron 50.0%
!! AGGTGTTGGTCTTGGTCCTT+TGG - chr8_3:55378715-55378734 Msa1296270:CDS 50.0%
!! TGTTGGTCTTGGTCCTTTGG+AGG - chr8_3:55378718-55378737 Msa1296270:CDS 50.0%
CTCATCCTGGAAGAGTTGGA+GGG - chr8_3:55378867-55378886 Msa1296270:intron 50.0%
TGATGCCGTCTATGTTGAGC+TGG - chr8_3:55378909-55378928 Msa1296270:CDS 50.0%
ATGTTGAGCTGGATCTTGGG+TGG - chr8_3:55378920-55378939 Msa1296270:CDS 50.0%
GCTGGATCTTGGGTGGAAAT+AGG - chr8_3:55378927-55378946 Msa1296270:CDS 50.0%
TCCGAGAGCCTGCAACTTAT+TGG + chr8_3:55379061-55379080 None:intergenic 50.0%
CAAACGGACAACTACGCCAA+TGG - chr8_3:55379218-55379237 Msa1296270:intron 50.0%
AGACCTGTTTCCTCTCCACA+TGG + chr8_3:55379398-55379417 None:intergenic 50.0%
GTAGGCATACCCGATTATGC+AGG + chr8_3:55379459-55379478 None:intergenic 50.0%
ACTGATATGCGGAGCGAACA+TGG - chr8_3:55379838-55379857 Msa1296270:intron 50.0%
ACACGAGCAGGGTAATTTGG+AGG + chr8_3:55379995-55380014 None:intergenic 50.0%
TGGACACGAGCAGGGTAATT+TGG + chr8_3:55379998-55380017 None:intergenic 50.0%
TCATCCTTCTTCGCGATGCT+TGG + chr8_3:55380199-55380218 None:intergenic 50.0%
GCTACATACACTGCCTTCCA+TGG + chr8_3:55380437-55380456 None:intergenic 50.0%
! CTTAGGGTGCTTGTAGCAGG+TGG - chr8_3:55374931-55374950 Msa1296270:exon 55.0%
!! GTAGCAGGTGGTGGAATTGG+TGG - chr8_3:55374943-55374962 Msa1296270:exon 55.0%
GAGTGCCCTTTGCTTAGCCA+AGG - chr8_3:55375422-55375441 Msa1296270:intron 55.0%
GGCAGAGTTTGCCGCCTATT+TGG - chr8_3:55375493-55375512 Msa1296270:intron 55.0%
CCTTGTGGGACCCAAATAGG+CGG + chr8_3:55375507-55375526 None:intergenic 55.0%
! GAGCCTTGTGGGACCCAAAT+AGG + chr8_3:55375510-55375529 None:intergenic 55.0%
TCAAAGCCAGCCGACCAAAG+AGG + chr8_3:55375933-55375952 None:intergenic 55.0%
TTCACTCCTGCAGTGGAACG+TGG - chr8_3:55376153-55376172 Msa1296270:intron 55.0%
TGCAGTGGAACGTGGTCTTC+CGG - chr8_3:55376161-55376180 Msa1296270:intron 55.0%
CTTCTCCAACTGCACGAGCA+AGG + chr8_3:55376224-55376243 None:intergenic 55.0%
TTCGGTTCATCAGCACCACC+GGG + chr8_3:55377275-55377294 None:intergenic 55.0%
CAGCCAAATATGGGCCAAGG+AGG - chr8_3:55377576-55377595 Msa1296270:CDS 55.0%
TATGGGCCAAGGAGGATGCA+TGG - chr8_3:55377584-55377603 Msa1296270:CDS 55.0%
CAATGGCCATGCATCCTCCT+TGG + chr8_3:55377593-55377612 None:intergenic 55.0%
AGGAGGATGCATGGCCATTG+AGG - chr8_3:55377593-55377612 Msa1296270:CDS 55.0%
TGACTTTGCAACCTCGAGGG+AGG + chr8_3:55377951-55377970 None:intergenic 55.0%
! GGCTAGAATGGCAGCTCTGA+TGG - chr8_3:55378670-55378689 Msa1296270:intron 55.0%
! GGTCTTGGTCCTTTGGAGGT+AGG - chr8_3:55378722-55378741 Msa1296270:CDS 55.0%
CCTCCAACTCTTCCAGGATG+AGG + chr8_3:55378869-55378888 None:intergenic 55.0%
CCTCATCCTGGAAGAGTTGG+AGG - chr8_3:55378866-55378885 Msa1296270:intron 55.0%
ATCCTGGAAGAGTTGGAGGG+AGG - chr8_3:55378870-55378889 Msa1296270:intron 55.0%
AACCTCCCTCCAACTCTTCC+AGG + chr8_3:55378875-55378894 None:intergenic 55.0%
! TTGCAGGAGTGCAGTGCAAG+AGG - chr8_3:55379631-55379650 Msa1296270:intron 55.0%
! TGCAGGAGTGCAGTGCAAGA+GGG - chr8_3:55379632-55379651 Msa1296270:intron 55.0%
CATATGGGTGGACACGAGCA+GGG + chr8_3:55380006-55380025 None:intergenic 55.0%
TCATATGGGTGGACACGAGC+AGG + chr8_3:55380007-55380026 None:intergenic 55.0%
CTTCTTCGCGATGCTTGGAG+CGG + chr8_3:55380194-55380213 None:intergenic 55.0%
! AGGGTGCTTGTAGCAGGTGG+TGG - chr8_3:55374934-55374953 Msa1296270:exon 60.0%
CCGCCTATTTGGGTCCCACA+AGG - chr8_3:55375504-55375523 Msa1296270:CDS 60.0%
GGAAGACCACGTTCCACTGC+AGG + chr8_3:55376162-55376181 None:intergenic 60.0%
GGGATCCTTGCTCGTGCAGT+TGG - chr8_3:55376216-55376235 Msa1296270:intron 60.0%
!! AGGCACTGACATGCCGACAC+CGG + chr8_3:55378448-55378467 None:intergenic 60.0%
GCGTGCGCGCCAATTGAGAA+GGG + chr8_3:55379553-55379572 None:intergenic 60.0%
! GCAGGAGTGCAGTGCAAGAG+GGG - chr8_3:55379633-55379652 Msa1296270:intron 60.0%
! CAGGAGTGCAGTGCAAGAGG+GGG - chr8_3:55379634-55379653 Msa1296270:intron 60.0%
TGCGGAGCGAACATGGCACT+TGG - chr8_3:55379845-55379864 Msa1296270:intron 60.0%
! CGCTCCAAGCATCGCGAAGA+AGG - chr8_3:55380192-55380211 Msa1296270:CDS 60.0%
CGCGTGCGCGCCAATTGAGA+AGG + chr8_3:55379554-55379573 None:intergenic 65.0%
GCAGTGCAAGAGGGGGATCC+AGG - chr8_3:55379641-55379660 Msa1296270:intron 65.0%
AGTCTCTGCCGTTGCGCGCG+CGG - chr8_3:55375538-55375557 Msa1296270:intron 70.0%
GGTATCCTCCGCGCGCGCAA+CGG + chr8_3:55375549-55375568 None:intergenic 70.0%
! CTCTGCCGTTGCGCGCGCGG+AGG - chr8_3:55375541-55375560 Msa1296270:intron 80.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 55374421 55380766 55374421 ID=Msa1296270;Name=Msa1296270
chr8_3 mRNA 55374421 55380766 55374421 ID=Msa1296270-mRNA-1;Parent=Msa1296270;Name=Msa1296270-mRNA-1;_AED=0.13;_eAED=0.13;_QI=270|0.87|0.88|1|0.81|0.76|17|489|649
chr8_3 exon 55374421 55374849 55374421 ID=Msa1296270-mRNA-1:exon:15876;Parent=Msa1296270-mRNA-1
chr8_3 exon 55374884 55375024 55374884 ID=Msa1296270-mRNA-1:exon:15875;Parent=Msa1296270-mRNA-1
chr8_3 exon 55375136 55375220 55375136 ID=Msa1296270-mRNA-1:exon:15874;Parent=Msa1296270-mRNA-1
chr8_3 exon 55375312 55375400 55375312 ID=Msa1296270-mRNA-1:exon:15873;Parent=Msa1296270-mRNA-1
chr8_3 exon 55375496 55375550 55375496 ID=Msa1296270-mRNA-1:exon:15872;Parent=Msa1296270-mRNA-1
chr8_3 exon 55375719 55375805 55375719 ID=Msa1296270-mRNA-1:exon:15871;Parent=Msa1296270-mRNA-1
chr8_3 exon 55375906 55375970 55375906 ID=Msa1296270-mRNA-1:exon:15870;Parent=Msa1296270-mRNA-1
chr8_3 exon 55376103 55376148 55376103 ID=Msa1296270-mRNA-1:exon:15869;Parent=Msa1296270-mRNA-1
chr8_3 exon 55376239 55376342 55376239 ID=Msa1296270-mRNA-1:exon:15868;Parent=Msa1296270-mRNA-1
chr8_3 exon 55376448 55376562 55376448 ID=Msa1296270-mRNA-1:exon:15867;Parent=Msa1296270-mRNA-1
chr8_3 exon 55376931 55377022 55376931 ID=Msa1296270-mRNA-1:exon:15866;Parent=Msa1296270-mRNA-1
chr8_3 exon 55377573 55377784 55377573 ID=Msa1296270-mRNA-1:exon:15865;Parent=Msa1296270-mRNA-1
chr8_3 exon 55377891 55378034 55377891 ID=Msa1296270-mRNA-1:exon:15864;Parent=Msa1296270-mRNA-1
chr8_3 exon 55378125 55378155 55378125 ID=Msa1296270-mRNA-1:exon:15863;Parent=Msa1296270-mRNA-1
chr8_3 exon 55378682 55378756 55378682 ID=Msa1296270-mRNA-1:exon:15862;Parent=Msa1296270-mRNA-1
chr8_3 exon 55378891 55379053 55378891 ID=Msa1296270-mRNA-1:exon:15861;Parent=Msa1296270-mRNA-1
chr8_3 exon 55379991 55380766 55379991 ID=Msa1296270-mRNA-1:exon:15860;Parent=Msa1296270-mRNA-1
chr8_3 five_prime_UTR 55380497 55380766 55380497 ID=Msa1296270-mRNA-1:five_prime_utr;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55379991 55380496 55379991 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55378891 55379053 55378891 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55378682 55378756 55378682 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55378125 55378155 55378125 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55377891 55378034 55377891 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55377573 55377784 55377573 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55376931 55377022 55376931 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55376448 55376562 55376448 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55376239 55376342 55376239 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55376103 55376148 55376103 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55375906 55375970 55375906 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55375719 55375805 55375719 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55375496 55375550 55375496 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55375312 55375400 55375312 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55375136 55375220 55375136 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 CDS 55374944 55375024 55374944 ID=Msa1296270-mRNA-1:cds;Parent=Msa1296270-mRNA-1
chr8_3 three_prime_UTR 55374884 55374943 55374884 ID=Msa1296270-mRNA-1:three_prime_utr;Parent=Msa1296270-mRNA-1
chr8_3 three_prime_UTR 55374421 55374849 55374421 ID=Msa1296270-mRNA-1:three_prime_utr;Parent=Msa1296270-mRNA-1
Gene Sequence

>Msa1296270

ATGGCTTCTACCTTATGTTACAACTCATTGAATCCATCTACAGCATCATTCTCAAGAACCCTTTTCTCAATTCCCACAAACAAAGACTTTTCATTGGAAAACACTTCATCTTTTCATAGCTATGGAAAAAACAGAGCAAAAAAACAGAGGAAGAATGTGTTTATGATGCATGTGAAAGTTAAAGCTACTGTAGCTGAAGCTACTGCACCACCTTCTTCAAAACAAGGTGAGAAGAAGAATCTTAGGGTGCTTGTAGCAGGTGGTGGAATTGGTGGATTGGTTTTTGCTTTGGCTGCAAAGAGAAAAGGATTTGAAGTGATGGTGTTTGAGAAAGATTTGAGTGCTGTGAGAGGAGAGGGACAGTATAGAGGTCCTATTCAGATACAGAGTAATGCTTTGGCTGCTTTGGAAGCTATTGATTCAGATGTTGCTGATGAAGTTATGAGAGTTGGTTGTATTACTGGTGATAGAATTAATGGTCTTGTTGATGGAGTTTCTGGTTCTTGGTACGTTAAGTTTGATACATTCACTCCTGCAGTGGAACGTGGTCTTCCGGTCACAAGAGTTATTAGCCGAATGACTTTGCAAGGGATCCTTGCTCGTGCAGTTGGAGAAGATATTGTTCTGAATGCCAGTAATGTCGTTAATTTCGCAGACGATGGAAGTAAGGTAACAGTAGAGCTCGAGAATGGTCAAAAATATGAAGGAGACCTATTGGTTGGAGCAGATGGTATATGGTCCAAGATTTTGTGCCTGCTGACATTGAATCTGTTGGAAGCTTACTTAAACTTTTCTTTGGGAAGGTACCGAGTATTCTTGGGACACAAACAATACTTTGTATCTTCAGATGTTGGAGGCGGAAAGATGCAATGGTATGCGTTTCACAAAGAAGCTCCCGGTGGTGCTGATGAACCGAATAAAAAAAAGGAAAGGTTGCTCAAGATATTTAAGGGCTGGTGTGATAATACGATAGATCTCATACTTGCCACAGATGAAGAGGCCATTCTGCGACGAGACATCTACGACAGAATACCGACATTTAAATGGGGAAAGGGTCGTGTTACTTTGCTTGGTGATTCAGTCCATGCCATGCAGCCAAATATGGGCCAAGGAGGATGCATGGCCATTGAGGACAGTTATCAACTTGCAAAGGAGTTGGACAATGCATGGGAACAAAGTATTAAATCAGGGAACCCAATTAAGGTTGATTCAGCCCTAAGGAGCTATGAAAGTGAAAGAAAACTGCGAGTTGCAGTTATTCACGGGATGGCTAGAATGGCAGCTCTGATGGCTTCCACTTACAAGGCATATCTAGGTGTTGGTCTTGGTCCTTTGGAGTTTTTGACCAACTTTCGCATACCTCATCCTGGAAGAGTTGGAGGGAGGTTTTTTGTCGACATTTTGATGCCGTCTATGTTGAGCTGGATCTTGGGTGGAAATAGTGACAAACTTGAAGGTAGACCAATAAGTTGCAGGCTCTCGGACAAAGCAAACGGACAACTACGCCAATGGTTTGAAGATGATGATGCACTTGAGCGTGCTATTAACGGAGAGTGGTTTTTATTACCATGTGGAGAGGAAACAGGTCTTTCAAAACCGATACGTTTAACACAAAATGAGATGAAACCCTGCATAATCGGGAGTGCAGTGCAAGAGGGGGATCCAGGTAGCTCAATTACAATTACTTCACCCAAGGTTTCTCCAACACATGCTCGAATTTACTACAAGGATGGAGCCTTCTTCGTAACTGATATGCGGAGCGAACATGGCACTTGGATCGCTGATATTGAAGGAAAGCGATATCGGGTTCCTCCAAATTACCCTGCTCGTGTCCACCCATATGATGTTCTTCAGTTTGGTTCTGAGAAGGTTTCATTTCGAGTTAAGGTGAAAAGTTCCGCTCCAAGCATCGCGAAGAAGGATGAGACACAAGTTTTGCTGCAAGTATGA

Protein sequence

>Msa1296270

MASTLCYNSLNPSTASFSRTLFSIPTNKDFSLENTSSFHSYGKNRAKKQRKNVFMMHVKVKATVAEATAPPSSKQGEKKNLRVLVAGGGIGGLVFALAAKRKGFEVMVFEKDLSAVRGEGQYRGPIQIQSNALAALEAIDSDVADEVMRVGCITGDRINGLVDGVSGSWYVKFDTFTPAVERGLPVTRVISRMTLQGILARAVGEDIVLNASNVVNFADDGSKVTVELENGQKYEGDLLVGADGIWSKILCLLTLNLLEAYLNFSLGRYRVFLGHKQYFVSSDVGGGKMQWYAFHKEAPGGADEPNKKKERLLKIFKGWCDNTIDLILATDEEAILRRDIYDRIPTFKWGKGRVTLLGDSVHAMQPNMGQGGCMAIEDSYQLAKELDNAWEQSIKSGNPIKVDSALRSYESERKLRVAVIHGMARMAALMASTYKAYLGVGLGPLEFLTNFRIPHPGRVGGRFFVDILMPSMLSWILGGNSDKLEGRPISCRLSDKANGQLRQWFEDDDALERAINGEWFLLPCGEETGLSKPIRLTQNEMKPCIIGSAVQEGDPGSSITITSPKVSPTHARIYYKDGAFFVTDMRSEHGTWIADIEGKRYRVPPNYPARVHPYDVLQFGSEKVSFRVKVKSSAPSIAKKDETQVLLQV*