Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154630 | XP_013449296.1 | 97.904 | 334 | 7 | 0 | 1 | 334 | 1 | 334 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154630 | sp|Q8VYJ2|AHL1_ARATH | 56.811 | 301 | 91 | 8 | 6 | 269 | 17 | 315 | 1.66e-95 | 290 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154630 | A0A072U297 | 97.904 | 334 | 7 | 0 | 1 | 334 | 1 | 334 | 0.0 | 667 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa1154630 | 0.834321 | 3.207539e-56 | -8.615850e-47 |
| Msa0007810 | Msa1154630 | -0.804926 | 1.708637e-49 | -8.615850e-47 |
| Msa0010210 | Msa1154630 | 0.802610 | 5.169844e-49 | -8.615850e-47 |
| Msa0015570 | Msa1154630 | 0.810964 | 8.868545e-51 | -8.615850e-47 |
| Msa0026250 | Msa1154630 | 0.853193 | 2.808520e-61 | -8.615850e-47 |
| Msa0030070 | Msa1154630 | 0.829865 | 4.053097e-55 | -8.615850e-47 |
| Msa0034700 | Msa1154630 | -0.832082 | 1.158062e-55 | -8.615850e-47 |
| Msa0035740 | Msa1154630 | 0.842977 | 1.859136e-58 | -8.615850e-47 |
| Msa0038150 | Msa1154630 | -0.801782 | 7.655289e-49 | -8.615850e-47 |
| Msa0038750 | Msa1154630 | -0.815104 | 1.097015e-51 | -8.615850e-47 |
| Msa0043720 | Msa1154630 | 0.801703 | 7.946550e-49 | -8.615850e-47 |
| Msa0045620 | Msa1154630 | 0.827639 | 1.400244e-54 | -8.615850e-47 |
| Msa0050530 | Msa1154630 | 0.828895 | 6.969285e-55 | -8.615850e-47 |
| Msa0056230 | Msa1154630 | -0.816672 | 4.900652e-52 | -8.615850e-47 |
| Msa0061130 | Msa1154630 | -0.880982 | 3.502673e-70 | -8.615850e-47 |
| Msa0064240 | Msa1154630 | -0.834793 | 2.439933e-56 | -8.615850e-47 |
| Msa0074060 | Msa1154630 | 0.843197 | 1.624542e-58 | -8.615850e-47 |
| Msa0077570 | Msa1154630 | -0.805859 | 1.089367e-49 | -8.615850e-47 |
| Msa0078160 | Msa1154630 | -0.804664 | 1.937938e-49 | -8.615850e-47 |
| Msa0080820 | Msa1154630 | 0.819017 | 1.448380e-52 | -8.615850e-47 |
| Msa0086620 | Msa1154630 | -0.802349 | 5.851936e-49 | -8.615850e-47 |
| Msa0089540 | Msa1154630 | 0.866657 | 2.428891e-65 | -8.615850e-47 |
| Msa0100600 | Msa1154630 | 0.834266 | 3.310145e-56 | -8.615850e-47 |
| Msa0100890 | Msa1154630 | 0.837087 | 6.391194e-57 | -8.615850e-47 |
| Msa0105680 | Msa1154630 | -0.853295 | 2.625494e-61 | -8.615850e-47 |
| Msa0109730 | Msa1154630 | 0.839446 | 1.577331e-57 | -8.615850e-47 |
| Msa0116620 | Msa1154630 | 0.818734 | 1.679737e-52 | -8.615850e-47 |
| Msa0116710 | Msa1154630 | 0.819162 | 1.342008e-52 | -8.615850e-47 |
| Msa0605350 | Msa1154630 | 0.802404 | 5.702157e-49 | -8.615850e-47 |
| Msa0605520 | Msa1154630 | 0.840912 | 6.532956e-58 | -8.615850e-47 |
| Msa0612520 | Msa1154630 | 0.821398 | 4.124881e-53 | -8.615850e-47 |
| Msa0612880 | Msa1154630 | -0.816788 | 4.615595e-52 | -8.615850e-47 |
| Msa0616230 | Msa1154630 | 0.814440 | 1.539374e-51 | -8.615850e-47 |
| Msa0619320 | Msa1154630 | -0.830183 | 3.389542e-55 | -8.615850e-47 |
| Msa0620900 | Msa1154630 | 0.819566 | 1.085970e-52 | -8.615850e-47 |
| Msa0623310 | Msa1154630 | 0.818742 | 1.672164e-52 | -8.615850e-47 |
| Msa0640800 | Msa1154630 | 0.820729 | 5.881026e-53 | -8.615850e-47 |
| Msa0646260 | Msa1154630 | 0.820222 | 7.686161e-53 | -8.615850e-47 |
| Msa0647440 | Msa1154630 | 0.809509 | 1.826710e-50 | -8.615850e-47 |
| Msa0653160 | Msa1154630 | 0.821660 | 3.587174e-53 | -8.615850e-47 |
| Msa0655710 | Msa1154630 | 0.812169 | 4.852748e-51 | -8.615850e-47 |
| Msa0660090 | Msa1154630 | 0.820207 | 7.747132e-53 | -8.615850e-47 |
| Msa0660260 | Msa1154630 | 0.892873 | 1.062281e-74 | -8.615850e-47 |
| Msa0663290 | Msa1154630 | 0.825550 | 4.409132e-54 | -8.615850e-47 |
| Msa0664070 | Msa1154630 | 0.825580 | 4.337447e-54 | -8.615850e-47 |
| Msa0673940 | Msa1154630 | 0.808863 | 2.512358e-50 | -8.615850e-47 |
| Msa0685390 | Msa1154630 | -0.844508 | 7.241082e-59 | -8.615850e-47 |
| Msa0685610 | Msa1154630 | 0.913120 | 8.891135e-84 | -8.615850e-47 |
| Msa0688620 | Msa1154630 | 0.867524 | 1.284194e-65 | -8.615850e-47 |
| Msa0695560 | Msa1154630 | 0.820905 | 5.356698e-53 | -8.615850e-47 |
| Msa0699560 | Msa1154630 | 0.814526 | 1.473192e-51 | -8.615850e-47 |
| Msa0701250 | Msa1154630 | 0.810353 | 1.202428e-50 | -8.615850e-47 |
| Msa0704780 | Msa1154630 | -0.808367 | 3.206424e-50 | -8.615850e-47 |
| Msa0705180 | Msa1154630 | 0.804904 | 1.726925e-49 | -8.615850e-47 |
| Msa0706690 | Msa1154630 | 0.829402 | 5.250848e-55 | -8.615850e-47 |
| Msa0708020 | Msa1154630 | 0.830144 | 3.465582e-55 | -8.615850e-47 |
| Msa0708980 | Msa1154630 | 0.815396 | 9.443620e-52 | -8.615850e-47 |
| Msa0714230 | Msa1154630 | -0.817948 | 2.530858e-52 | -8.615850e-47 |
| Msa0720280 | Msa1154630 | 0.833550 | 5.000396e-56 | -8.615850e-47 |
| Msa0730250 | Msa1154630 | -0.800586 | 1.344233e-48 | -8.615850e-47 |
| Msa0737020 | Msa1154630 | 0.827563 | 1.460011e-54 | -8.615850e-47 |
| Msa0749190 | Msa1154630 | 0.865784 | 4.593124e-65 | -8.615850e-47 |
| Msa0750520 | Msa1154630 | 0.870289 | 1.632917e-66 | -8.615850e-47 |
| Msa0751720 | Msa1154630 | 0.832310 | 1.017066e-55 | -8.615850e-47 |
| Msa0755480 | Msa1154630 | -0.804428 | 2.170804e-49 | -8.615850e-47 |
| Msa0761830 | Msa1154630 | 0.807313 | 5.371674e-50 | -8.615850e-47 |
| Msa0768960 | Msa1154630 | 0.815241 | 1.022606e-51 | -8.615850e-47 |
| Msa0774060 | Msa1154630 | 0.809179 | 2.150254e-50 | -8.615850e-47 |
| Msa0778600 | Msa1154630 | 0.817153 | 3.821616e-52 | -8.615850e-47 |
| Msa0780820 | Msa1154630 | 0.817731 | 2.832298e-52 | -8.615850e-47 |
| Msa0786740 | Msa1154630 | 0.854750 | 9.999862e-62 | -8.615850e-47 |
| Msa0797950 | Msa1154630 | 0.804198 | 2.423502e-49 | -8.615850e-47 |
| Msa0803140 | Msa1154630 | 0.832424 | 9.528082e-56 | -8.615850e-47 |
| Msa0812020 | Msa1154630 | -0.805239 | 1.469053e-49 | -8.615850e-47 |
| Msa0822510 | Msa1154630 | 0.866777 | 2.225300e-65 | -8.615850e-47 |
| Msa0822680 | Msa1154630 | -0.805250 | 1.461296e-49 | -8.615850e-47 |
| Msa0827340 | Msa1154630 | -0.809321 | 2.004987e-50 | -8.615850e-47 |
| Msa0827420 | Msa1154630 | 0.836800 | 7.566677e-57 | -8.615850e-47 |
| Msa0831820 | Msa1154630 | 0.862494 | 4.870491e-64 | -8.615850e-47 |
| Msa0841500 | Msa1154630 | 0.831027 | 2.106317e-55 | -8.615850e-47 |
| Msa0125590 | Msa1154630 | 0.821288 | 4.372128e-53 | -8.615850e-47 |
| Msa0129930 | Msa1154630 | -0.807360 | 5.251379e-50 | -8.615850e-47 |
| Msa0135230 | Msa1154630 | 0.813357 | 2.666631e-51 | -8.615850e-47 |
| Msa0138350 | Msa1154630 | 0.825160 | 5.454599e-54 | -8.615850e-47 |
| Msa0140870 | Msa1154630 | -0.807546 | 4.794376e-50 | -8.615850e-47 |
| Msa0152190 | Msa1154630 | -0.882626 | 8.893576e-71 | -8.615850e-47 |
| Msa0156050 | Msa1154630 | 0.827076 | 1.910554e-54 | -8.615850e-47 |
| Msa0156090 | Msa1154630 | 0.829984 | 3.789888e-55 | -8.615850e-47 |
| Msa0159730 | Msa1154630 | 0.827517 | 1.497440e-54 | -8.615850e-47 |
| Msa0161960 | Msa1154630 | 0.801488 | 8.792982e-49 | -8.615850e-47 |
| Msa0168380 | Msa1154630 | 0.846990 | 1.534160e-59 | -8.615850e-47 |
| Msa0170070 | Msa1154630 | 0.819816 | 9.521260e-53 | -8.615850e-47 |
| Msa0172590 | Msa1154630 | 0.832924 | 7.161393e-56 | -8.615850e-47 |
| Msa0173380 | Msa1154630 | 0.856363 | 3.385482e-62 | -8.615850e-47 |
| Msa0192830 | Msa1154630 | 0.804022 | 2.636394e-49 | -8.615850e-47 |
| Msa0204970 | Msa1154630 | 0.831648 | 1.482209e-55 | -8.615850e-47 |
| Msa0205250 | Msa1154630 | 0.807800 | 4.235528e-50 | -8.615850e-47 |
| Msa0213590 | Msa1154630 | -0.807041 | 6.134337e-50 | -8.615850e-47 |
| Msa0219840 | Msa1154630 | 0.824463 | 7.961737e-54 | -8.615850e-47 |
| Msa0221180 | Msa1154630 | 0.860976 | 1.418170e-63 | -8.615850e-47 |
| Msa0221460 | Msa1154630 | -0.854903 | 9.028986e-62 | -8.615850e-47 |
| Msa0225800 | Msa1154630 | 0.801913 | 7.193507e-49 | -8.615850e-47 |
| Msa0227790 | Msa1154630 | 0.812624 | 3.860339e-51 | -8.615850e-47 |
| Msa0229750 | Msa1154630 | -0.801943 | 7.093378e-49 | -8.615850e-47 |
| Msa0369580 | Msa1154630 | -0.874535 | 6.260311e-68 | -8.615850e-47 |
| Msa0371350 | Msa1154630 | -0.822675 | 2.086829e-53 | -8.615850e-47 |
| Msa0372100 | Msa1154630 | 0.820819 | 5.607161e-53 | -8.615850e-47 |
| Msa0388250 | Msa1154630 | 0.841922 | 3.541664e-58 | -8.615850e-47 |
| Msa0416210 | Msa1154630 | 0.854118 | 1.522348e-61 | -8.615850e-47 |
| Msa0417000 | Msa1154630 | -0.854683 | 1.045158e-61 | -8.615850e-47 |
| Msa0419420 | Msa1154630 | -0.814141 | 1.792272e-51 | -8.615850e-47 |
| Msa0430040 | Msa1154630 | -0.820979 | 5.151575e-53 | -8.615850e-47 |
| Msa0432200 | Msa1154630 | 0.813009 | 3.179514e-51 | -8.615850e-47 |
| Msa0433630 | Msa1154630 | 0.834066 | 3.716191e-56 | -8.615850e-47 |
| Msa0463820 | Msa1154630 | -0.849091 | 4.038036e-60 | -8.615850e-47 |
| Msa0469060 | Msa1154630 | 0.810826 | 9.501004e-51 | -8.615850e-47 |
| Msa0474670 | Msa1154630 | -0.802013 | 6.862588e-49 | -8.615850e-47 |
| Msa0999950 | Msa1154630 | 0.817857 | 2.652402e-52 | -8.615850e-47 |
| Msa1008850 | Msa1154630 | 0.822307 | 2.540251e-53 | -8.615850e-47 |
| Msa1017610 | Msa1154630 | -0.803790 | 2.947106e-49 | -8.615850e-47 |
| Msa1026710 | Msa1154630 | 0.855654 | 5.455363e-62 | -8.615850e-47 |
| Msa1027160 | Msa1154630 | 0.950264 | 2.358233e-108 | -8.615850e-47 |
| Msa1033420 | Msa1154630 | 0.825568 | 4.365583e-54 | -8.615850e-47 |
| Msa1033430 | Msa1154630 | 0.830468 | 2.887309e-55 | -8.615850e-47 |
| Msa1034960 | Msa1154630 | 0.830273 | 3.223058e-55 | -8.615850e-47 |
| Msa1038860 | Msa1154630 | 0.825044 | 5.809748e-54 | -8.615850e-47 |
| Msa1057620 | Msa1154630 | -0.819579 | 1.078450e-52 | -8.615850e-47 |
| Msa1071410 | Msa1154630 | 0.871751 | 5.383537e-67 | -8.615850e-47 |
| Msa1073050 | Msa1154630 | 0.830742 | 2.473801e-55 | -8.615850e-47 |
| Msa1073060 | Msa1154630 | 0.817352 | 3.448441e-52 | -8.615850e-47 |
| Msa1085570 | Msa1154630 | -0.821604 | 3.695789e-53 | -8.615850e-47 |
| Msa1085680 | Msa1154630 | 0.816004 | 6.913270e-52 | -8.615850e-47 |
| Msa0238960 | Msa1154630 | -0.851576 | 8.113410e-61 | -8.615850e-47 |
| Msa0244820 | Msa1154630 | -0.849312 | 3.505659e-60 | -8.615850e-47 |
| Msa0249870 | Msa1154630 | 0.818847 | 1.583207e-52 | -8.615850e-47 |
| Msa0258910 | Msa1154630 | 0.805656 | 1.201251e-49 | -8.615850e-47 |
| Msa0262750 | Msa1154630 | 0.835453 | 1.663709e-56 | -8.615850e-47 |
| Msa0267450 | Msa1154630 | -0.808446 | 3.084814e-50 | -8.615850e-47 |
| Msa0267510 | Msa1154630 | -0.805287 | 1.435971e-49 | -8.615850e-47 |
| Msa0269220 | Msa1154630 | -0.816137 | 6.457223e-52 | -8.615850e-47 |
| Msa0270830 | Msa1154630 | -0.820461 | 6.775013e-53 | -8.615850e-47 |
| Msa0276800 | Msa1154630 | -0.868897 | 4.639354e-66 | -8.615850e-47 |
| Msa0281540 | Msa1154630 | 0.825127 | 5.553934e-54 | -8.615850e-47 |
| Msa0288400 | Msa1154630 | 0.829519 | 4.919101e-55 | -8.615850e-47 |
| Msa0297200 | Msa1154630 | 0.823537 | 1.313506e-53 | -8.615850e-47 |
| Msa0300470 | Msa1154630 | 0.843560 | 1.300012e-58 | -8.615850e-47 |
| Msa0300670 | Msa1154630 | -0.846427 | 2.187015e-59 | -8.615850e-47 |
| Msa0316720 | Msa1154630 | -0.874274 | 7.678073e-68 | -8.615850e-47 |
| Msa0320580 | Msa1154630 | 0.811680 | 6.203693e-51 | -8.615850e-47 |
| Msa0336430 | Msa1154630 | 0.837937 | 3.870584e-57 | -8.615850e-47 |
| Msa0336460 | Msa1154630 | 0.808230 | 3.429861e-50 | -8.615850e-47 |
| Msa0336520 | Msa1154630 | 0.830646 | 2.612435e-55 | -8.615850e-47 |
| Msa0337760 | Msa1154630 | -0.846188 | 2.540337e-59 | -8.615850e-47 |
| Msa0337970 | Msa1154630 | 0.841072 | 5.929327e-58 | -8.615850e-47 |
| Msa0342220 | Msa1154630 | 0.839973 | 1.150073e-57 | -8.615850e-47 |
| Msa0344110 | Msa1154630 | 0.816111 | 6.543529e-52 | -8.615850e-47 |
| Msa1130770 | Msa1154630 | 0.822581 | 2.194586e-53 | -8.615850e-47 |
| Msa1136970 | Msa1154630 | -0.833761 | 4.428559e-56 | -8.615850e-47 |
| Msa1138800 | Msa1154630 | 0.830570 | 2.726350e-55 | -8.615850e-47 |
| Msa1144990 | Msa1154630 | 0.865191 | 7.061164e-65 | -8.615850e-47 |
| Msa1154630 | Msa1160780 | 0.800612 | 1.328097e-48 | -8.615850e-47 |
| Msa1154630 | Msa1162360 | 0.849129 | 3.942466e-60 | -8.615850e-47 |
| Msa1154630 | Msa1183910 | 0.824911 | 6.244590e-54 | -8.615850e-47 |
| Msa1154630 | Msa1196210 | -0.816688 | 4.860989e-52 | -8.615850e-47 |
| Msa1154630 | Msa1202220 | -0.837351 | 5.472485e-57 | -8.615850e-47 |
| Msa1154630 | Msa1206040 | 0.837014 | 6.672260e-57 | -8.615850e-47 |
| Msa1154630 | Msa1223440 | 0.815251 | 1.017539e-51 | -8.615850e-47 |
| Msa1154630 | Msa1231440 | 0.806831 | 6.795589e-50 | -8.615850e-47 |
| Msa1154630 | Msa1243630 | -0.816985 | 4.170331e-52 | -8.615850e-47 |
| Msa1154630 | Msa1244220 | -0.815649 | 8.297126e-52 | -8.615850e-47 |
| Msa1154630 | Msa1255030 | -0.801777 | 7.671256e-49 | -8.615850e-47 |
| Msa1154630 | Msa1266120 | -0.804287 | 2.322786e-49 | -8.615850e-47 |
| Msa1154630 | Msa1267930 | 0.811164 | 8.028941e-51 | -8.615850e-47 |
| Msa1154630 | Msa1278000 | 0.801784 | 7.644998e-49 | -8.615850e-47 |
| Msa1154630 | Msa1278030 | 0.816310 | 5.907345e-52 | -8.615850e-47 |
| Msa1154630 | Msa1288970 | -0.810204 | 1.294969e-50 | -8.615850e-47 |
| Msa1154630 | Msa1295480 | -0.803493 | 3.395276e-49 | -8.615850e-47 |
| Msa1154630 | Msa1297070 | 0.847486 | 1.122006e-59 | -8.615850e-47 |
| Msa1154630 | Msa1308850 | 0.836091 | 1.146557e-56 | -8.615850e-47 |
| Msa1154630 | Msa1308860 | 0.834568 | 2.779571e-56 | -8.615850e-47 |
| Msa1154630 | Msa1328870 | 0.833359 | 5.580127e-56 | -8.615850e-47 |
| Msa1154630 | Msa1335200 | -0.801245 | 9.861824e-49 | -8.615850e-47 |
| Msa1154630 | Msa1338810 | -0.807593 | 4.686408e-50 | -8.615850e-47 |
| Msa1154630 | Msa1342810 | 0.803021 | 4.253339e-49 | -8.615850e-47 |
| Msa1154630 | Msa1343460 | 0.838296 | 3.129216e-57 | -8.615850e-47 |
| Msa1154630 | Msa1347070 | 0.800498 | 1.400994e-48 | -8.615850e-47 |
| Msa1154630 | Msa1347610 | 0.818902 | 1.538030e-52 | -8.615850e-47 |
| Msa1154630 | Msa1349850 | -0.845178 | 4.775866e-59 | -8.615850e-47 |
| Msa1154630 | Msa1356450 | 0.871913 | 4.756413e-67 | -8.615850e-47 |
| Msa1154630 | Msa1362590 | 0.831772 | 1.380955e-55 | -8.615850e-47 |
| Msa1154630 | Msa1366140 | -0.837001 | 6.725604e-57 | -8.615850e-47 |
| Msa1154630 | Msa1368170 | 0.804899 | 1.731049e-49 | -8.615850e-47 |
| Msa1154630 | Msa1370270 | -0.818851 | 1.579629e-52 | -8.615850e-47 |
| Msa1154630 | Msa1371270 | 0.838361 | 3.009544e-57 | -8.615850e-47 |
| Msa1154630 | Msa1371530 | 0.818856 | 1.575990e-52 | -8.615850e-47 |
| Msa1154630 | Msa1371800 | 0.832097 | 1.148164e-55 | -8.615850e-47 |
| Msa1154630 | Msa1372030 | 0.876740 | 1.097526e-68 | -8.615850e-47 |
| Msa1154630 | Msa1376310 | 0.826090 | 3.282416e-54 | -8.615850e-47 |
| Msa1154630 | Msa1377140 | 0.828959 | 6.725138e-55 | -8.615850e-47 |
| Msa1154630 | Msa1379940 | 0.823518 | 1.326846e-53 | -8.615850e-47 |
| Msa1154630 | Msa1381800 | 0.867097 | 1.759381e-65 | -8.615850e-47 |
| Msa1154630 | Msa1385570 | 0.804588 | 2.009720e-49 | -8.615850e-47 |
| Msa1154630 | Msa1386320 | 0.815028 | 1.140352e-51 | -8.615850e-47 |
| Msa1154630 | Msa1387100 | -0.809553 | 1.788030e-50 | -8.615850e-47 |
| Msa1154630 | Msa1387450 | -0.836700 | 8.026870e-57 | -8.615850e-47 |
| Msa1154630 | Msa1389820 | 0.829625 | 4.636739e-55 | -8.615850e-47 |
| Msa1154630 | Msa1396110 | 0.846176 | 2.560475e-59 | -8.615850e-47 |
| Msa1154630 | Msa1417930 | 0.805745 | 1.150924e-49 | -8.615850e-47 |
| Msa1154630 | Msa1420830 | 0.857959 | 1.143597e-62 | -8.615850e-47 |
| Msa1154630 | Msa1424370 | 0.828085 | 1.093846e-54 | -8.615850e-47 |
| Msa1154630 | Msa1427600 | -0.845142 | 4.882403e-59 | -8.615850e-47 |
| Msa1154630 | Msa1428230 | -0.803537 | 3.324571e-49 | -8.615850e-47 |
| Msa1154630 | Msa1434710 | -0.809915 | 1.494598e-50 | -8.615850e-47 |
| Msa1154630 | Msa1438510 | 0.817329 | 3.488614e-52 | -8.615850e-47 |
| Msa1154630 | Msa1447900 | 0.801533 | 8.607254e-49 | -8.615850e-47 |
| Msa1154630 | Msa1448410 | -0.801120 | 1.046088e-48 | -8.615850e-47 |
| Msa1154630 | Msa1450290 | 0.819874 | 9.237145e-53 | -8.615850e-47 |
| Msa1154630 | Msa1453030 | 0.828515 | 8.615539e-55 | -8.615850e-47 |
| Msa1154630 | Msa1456040 | 0.817697 | 2.883040e-52 | -8.615850e-47 |
| Msa0484590 | Msa1154630 | -0.807939 | 3.957010e-50 | -8.615850e-47 |
| Msa0500920 | Msa1154630 | 0.801209 | 1.002943e-48 | -8.615850e-47 |
| Msa0507810 | Msa1154630 | 0.821263 | 4.432078e-53 | -8.615850e-47 |
| Msa0507820 | Msa1154630 | 0.818581 | 1.819296e-52 | -8.615850e-47 |
| Msa0507920 | Msa1154630 | 0.822424 | 2.386880e-53 | -8.615850e-47 |
| Msa0511600 | Msa1154630 | -0.807418 | 5.103080e-50 | -8.615850e-47 |
| Msa0521060 | Msa1154630 | 0.815914 | 7.242958e-52 | -8.615850e-47 |
| Msa0521510 | Msa1154630 | 0.830158 | 3.438611e-55 | -8.615850e-47 |
| Msa0526150 | Msa1154630 | 0.801786 | 7.637847e-49 | -8.615850e-47 |
| Msa0527200 | Msa1154630 | 0.822200 | 2.690142e-53 | -8.615850e-47 |
| Msa0527850 | Msa1154630 | 0.833867 | 4.166795e-56 | -8.615850e-47 |
| Msa0541740 | Msa1154630 | 0.814735 | 1.324101e-51 | -8.615850e-47 |
| Msa0541880 | Msa1154630 | 0.913853 | 3.798124e-84 | -8.615850e-47 |
| Msa0541940 | Msa1154630 | 0.917225 | 6.876159e-86 | -8.615850e-47 |
| Msa0544410 | Msa1154630 | 0.831273 | 1.832744e-55 | -8.615850e-47 |
| Msa0549870 | Msa1154630 | 0.827131 | 1.853206e-54 | -8.615850e-47 |
| Msa0557850 | Msa1154630 | 0.819413 | 1.176847e-52 | -8.615850e-47 |
| Msa0568460 | Msa1154630 | -0.827838 | 1.254035e-54 | -8.615850e-47 |
| Msa0568710 | Msa1154630 | 0.821334 | 4.266664e-53 | -8.615850e-47 |
| Msa0571350 | Msa1154630 | 0.882842 | 7.416658e-71 | -8.615850e-47 |
| Msa0572360 | Msa1154630 | 0.828027 | 1.129116e-54 | -8.615850e-47 |
| Msa0575710 | Msa1154630 | 0.825637 | 4.206077e-54 | -8.615850e-47 |
| Msa0576330 | Msa1154630 | 0.817375 | 3.407789e-52 | -8.615850e-47 |
| Msa0582460 | Msa1154630 | 0.840668 | 7.570924e-58 | -8.615850e-47 |
| Msa0586200 | Msa1154630 | 0.823194 | 1.579310e-53 | -8.615850e-47 |
| Msa0587180 | Msa1154630 | 0.809457 | 1.874289e-50 | -8.615850e-47 |
| Msa0598470 | Msa1154630 | -0.800866 | 1.178930e-48 | -8.615850e-47 |
| Msa0856220 | Msa1154630 | 0.802667 | 5.032493e-49 | -8.615850e-47 |
| Msa0857260 | Msa1154630 | 0.830257 | 3.251993e-55 | -8.615850e-47 |
| Msa0866510 | Msa1154630 | -0.814013 | 1.912420e-51 | -8.615850e-47 |
| Msa0871420 | Msa1154630 | 0.806683 | 7.300923e-50 | -8.615850e-47 |
| Msa0876630 | Msa1154630 | 0.840142 | 1.039253e-57 | -8.615850e-47 |
| Msa0900090 | Msa1154630 | 0.805145 | 1.537680e-49 | -8.615850e-47 |
| Msa0902270 | Msa1154630 | 0.809866 | 1.530797e-50 | -8.615850e-47 |
| Msa0904590 | Msa1154630 | 0.802110 | 6.554008e-49 | -8.615850e-47 |
| Msa0929900 | Msa1154630 | 0.837177 | 6.062284e-57 | -8.615850e-47 |
| Msa0930950 | Msa1154630 | -0.835546 | 1.575880e-56 | -8.615850e-47 |
| Msa0936630 | Msa1154630 | 0.805316 | 1.415760e-49 | -8.615850e-47 |
| Msa0941150 | Msa1154630 | -0.807230 | 5.595539e-50 | -8.615850e-47 |
| Msa0965470 | Msa1154630 | 0.823024 | 1.730014e-53 | -8.615850e-47 |
| Msa0970040 | Msa1154630 | 0.880805 | 4.056675e-70 | -8.615850e-47 |
| Msa0970100 | Msa1154630 | 0.851730 | 7.336679e-61 | -8.615850e-47 |
| Msa0978980 | Msa1154630 | 0.876450 | 1.383193e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154630 | MtrunA17_Chr7g0245841 | 97.904 | 334 | 7 | 0 | 1 | 334 | 1 | 334 | 0.0 | 667 |
| Msa1154630 | MtrunA17_Chr8g0351761 | 69.916 | 359 | 81 | 8 | 1 | 334 | 1 | 357 | 9.50e-152 | 430 |
| Msa1154630 | MtrunA17_Chr4g0056761 | 54.701 | 351 | 119 | 11 | 1 | 332 | 1 | 330 | 5.11e-78 | 241 |
| Msa1154630 | MtrunA17_Chr1g0188211 | 48.214 | 336 | 127 | 11 | 1 | 315 | 1 | 310 | 3.36e-77 | 240 |
| Msa1154630 | MtrunA17_Chr1g0179461 | 42.581 | 310 | 129 | 10 | 60 | 333 | 69 | 365 | 2.21e-64 | 207 |
| Msa1154630 | MtrunA17_Chr6g0476061 | 45.324 | 278 | 122 | 5 | 1 | 263 | 1 | 263 | 1.76e-58 | 191 |
| Msa1154630 | MtrunA17_Chr5g0398621 | 47.773 | 247 | 97 | 8 | 15 | 253 | 4 | 226 | 2.11e-56 | 183 |
| Msa1154630 | MtrunA17_Chr5g0397551 | 45.175 | 228 | 112 | 5 | 58 | 278 | 68 | 289 | 9.46e-53 | 176 |
| Msa1154630 | MtrunA17_Chr8g0349091 | 47.137 | 227 | 111 | 2 | 60 | 278 | 89 | 314 | 2.43e-52 | 176 |
| Msa1154630 | MtrunA17_Chr8g0386741 | 45.455 | 231 | 109 | 5 | 59 | 278 | 96 | 320 | 2.07e-49 | 168 |
| Msa1154630 | MtrunA17_Chr7g0247431 | 45.022 | 231 | 119 | 2 | 56 | 278 | 85 | 315 | 5.81e-49 | 167 |
| Msa1154630 | MtrunA17_Chr4g0054661 | 48.792 | 207 | 79 | 5 | 48 | 243 | 67 | 257 | 6.09e-49 | 167 |
| Msa1154630 | MtrunA17_Chr1g0190011 | 40.260 | 231 | 131 | 5 | 60 | 287 | 43 | 269 | 3.98e-36 | 133 |
| Msa1154630 | MtrunA17_Chr7g0274821 | 44.792 | 192 | 101 | 3 | 60 | 249 | 74 | 262 | 9.22e-35 | 130 |
| Msa1154630 | MtrunA17_Chr1g0165101 | 40.889 | 225 | 105 | 8 | 38 | 242 | 62 | 278 | 6.87e-34 | 127 |
| Msa1154630 | MtrunA17_Chr4g0027331 | 52.893 | 121 | 54 | 2 | 119 | 236 | 11 | 131 | 1.17e-33 | 120 |
| Msa1154630 | MtrunA17_Chr6g0476241 | 42.574 | 202 | 99 | 7 | 60 | 260 | 120 | 305 | 3.64e-33 | 124 |
| Msa1154630 | MtrunA17_Chr4g0027351 | 52.500 | 120 | 54 | 2 | 119 | 237 | 11 | 128 | 4.66e-33 | 119 |
| Msa1154630 | MtrunA17_Chr4g0027371 | 48.905 | 137 | 65 | 3 | 120 | 251 | 12 | 148 | 6.77e-33 | 122 |
| Msa1154630 | MtrunA17_Chr4g0027301 | 42.742 | 124 | 68 | 2 | 117 | 237 | 16 | 139 | 3.04e-24 | 96.3 |
| Msa1154630 | MtrunA17_Chr5g0417581 | 41.007 | 139 | 62 | 4 | 121 | 242 | 13 | 148 | 4.70e-24 | 97.4 |
| Msa1154630 | MtrunA17_Chr3g0133051 | 40.000 | 115 | 68 | 1 | 129 | 242 | 103 | 217 | 1.18e-21 | 93.2 |
| Msa1154630 | MtrunA17_Chr3g0112131 | 43.363 | 113 | 61 | 1 | 130 | 242 | 109 | 218 | 3.40e-20 | 89.4 |
| Msa1154630 | MtrunA17_Chr5g0427311 | 40.517 | 116 | 65 | 3 | 129 | 242 | 82 | 195 | 4.62e-20 | 87.8 |
| Msa1154630 | MtrunA17_Chr5g0443311 | 32.995 | 197 | 89 | 3 | 47 | 243 | 38 | 191 | 8.15e-18 | 81.6 |
| Msa1154630 | MtrunA17_Chr8g0351651 | 46.903 | 113 | 57 | 1 | 130 | 242 | 116 | 225 | 3.19e-17 | 80.9 |
| Msa1154630 | MtrunA17_Chr4g0054651 | 45.614 | 114 | 57 | 2 | 130 | 242 | 106 | 215 | 3.53e-17 | 80.5 |
| Msa1154630 | MtrunA17_Chr1g0168121 | 41.593 | 113 | 63 | 1 | 130 | 242 | 72 | 181 | 4.51e-17 | 80.1 |
| Msa1154630 | MtrunA17_Chr7g0250031 | 52.239 | 67 | 32 | 0 | 130 | 196 | 87 | 153 | 4.62e-17 | 79.7 |
| Msa1154630 | MtrunA17_Chr5g0400531 | 45.802 | 131 | 50 | 7 | 63 | 182 | 123 | 243 | 8.26e-17 | 79.0 |
| Msa1154630 | MtrunA17_Chr3g0086021 | 42.056 | 107 | 56 | 2 | 139 | 242 | 118 | 221 | 8.71e-17 | 79.7 |
| Msa1154630 | MtrunA17_Chr5g0398531 | 43.363 | 113 | 61 | 1 | 130 | 242 | 130 | 239 | 2.03e-16 | 79.0 |
| Msa1154630 | MtrunA17_Chr1g0190051 | 44.248 | 113 | 60 | 1 | 130 | 242 | 104 | 213 | 2.24e-15 | 75.5 |
| Msa1154630 | MtrunA17_Chr5g0398591 | 37.121 | 132 | 56 | 3 | 179 | 310 | 11 | 115 | 5.51e-14 | 67.8 |
| Msa1154630 | MtrunA17_Chr5g0435681 | 40.179 | 112 | 64 | 1 | 131 | 242 | 120 | 228 | 6.28e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154630 | AT4G12080.1 | 56.811 | 301 | 91 | 8 | 6 | 269 | 17 | 315 | 1.69e-96 | 290 |
| Msa1154630 | AT4G22770.2 | 59.206 | 277 | 88 | 10 | 6 | 261 | 13 | 285 | 4.49e-79 | 245 |
| Msa1154630 | AT4G22770.1 | 59.206 | 277 | 88 | 10 | 6 | 261 | 13 | 285 | 4.49e-79 | 245 |
| Msa1154630 | AT4G25320.1 | 56.757 | 222 | 76 | 3 | 48 | 250 | 69 | 289 | 1.55e-76 | 241 |
| Msa1154630 | AT4G00200.2 | 52.711 | 332 | 116 | 11 | 14 | 332 | 13 | 316 | 1.20e-75 | 235 |
| Msa1154630 | AT4G00200.1 | 52.711 | 332 | 116 | 11 | 14 | 332 | 13 | 316 | 1.20e-75 | 235 |
| Msa1154630 | AT5G62260.1 | 57.075 | 212 | 74 | 4 | 60 | 254 | 76 | 287 | 2.76e-69 | 222 |
| Msa1154630 | AT5G62260.3 | 57.075 | 212 | 74 | 4 | 60 | 254 | 76 | 287 | 2.76e-69 | 222 |
| Msa1154630 | AT5G51590.1 | 55.251 | 219 | 63 | 3 | 59 | 243 | 77 | 294 | 4.10e-67 | 217 |
| Msa1154630 | AT5G62260.2 | 54.460 | 213 | 79 | 5 | 60 | 254 | 76 | 288 | 1.39e-64 | 206 |
| Msa1154630 | AT2G33620.1 | 52.511 | 219 | 92 | 5 | 59 | 274 | 96 | 305 | 2.09e-64 | 207 |
| Msa1154630 | AT2G33620.4 | 52.511 | 219 | 92 | 5 | 59 | 274 | 96 | 305 | 2.09e-64 | 207 |
| Msa1154630 | AT2G33620.2 | 52.511 | 219 | 92 | 5 | 59 | 274 | 96 | 305 | 2.09e-64 | 207 |
| Msa1154630 | AT2G33620.3 | 52.511 | 219 | 92 | 5 | 59 | 274 | 96 | 305 | 2.09e-64 | 207 |
| Msa1154630 | AT2G45850.1 | 49.761 | 209 | 98 | 3 | 59 | 266 | 97 | 299 | 3.36e-53 | 179 |
| Msa1154630 | AT2G45850.2 | 49.761 | 209 | 98 | 3 | 59 | 266 | 97 | 299 | 3.36e-53 | 179 |
| Msa1154630 | AT1G63470.1 | 49.738 | 191 | 88 | 3 | 59 | 243 | 104 | 292 | 1.86e-51 | 175 |
| Msa1154630 | AT3G61310.1 | 52.688 | 186 | 84 | 2 | 58 | 243 | 99 | 280 | 9.64e-51 | 172 |
| Msa1154630 | AT4G17950.1 | 43.966 | 232 | 95 | 5 | 50 | 251 | 121 | 347 | 8.59e-50 | 172 |
| Msa1154630 | AT2G45850.3 | 50.543 | 184 | 88 | 1 | 59 | 242 | 97 | 277 | 3.67e-49 | 166 |
| Msa1154630 | AT5G46640.1 | 47.619 | 231 | 84 | 7 | 49 | 256 | 87 | 303 | 1.66e-46 | 162 |
| Msa1154630 | AT1G63480.5 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.44e-45 | 157 |
| Msa1154630 | AT1G63480.7 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.44e-45 | 157 |
| Msa1154630 | AT1G63480.4 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.44e-45 | 157 |
| Msa1154630 | AT1G63480.3 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.44e-45 | 157 |
| Msa1154630 | AT1G63480.6 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.44e-45 | 157 |
| Msa1154630 | AT1G63480.2 | 48.108 | 185 | 89 | 4 | 59 | 243 | 98 | 275 | 5.67e-45 | 157 |
| Msa1154630 | AT1G63480.1 | 48.108 | 185 | 89 | 4 | 59 | 243 | 98 | 275 | 5.67e-45 | 157 |
| Msa1154630 | AT3G04590.1 | 44.271 | 192 | 101 | 4 | 59 | 249 | 104 | 290 | 7.08e-39 | 140 |
| Msa1154630 | AT3G04590.2 | 43.284 | 201 | 108 | 4 | 59 | 258 | 104 | 299 | 1.11e-37 | 139 |
| Msa1154630 | AT2G36560.1 | 39.310 | 145 | 85 | 3 | 124 | 265 | 102 | 246 | 3.58e-24 | 103 |
| Msa1154630 | AT5G49700.1 | 36.090 | 133 | 74 | 3 | 129 | 250 | 85 | 217 | 6.49e-20 | 88.6 |
| Msa1154630 | AT3G60870.1 | 39.655 | 116 | 65 | 2 | 127 | 242 | 86 | 196 | 9.21e-20 | 87.8 |
| Msa1154630 | AT1G14490.1 | 35.185 | 162 | 93 | 4 | 101 | 251 | 5 | 165 | 1.78e-19 | 85.5 |
| Msa1154630 | AT1G14490.2 | 35.000 | 180 | 100 | 5 | 83 | 251 | 11 | 184 | 1.93e-19 | 85.9 |
| Msa1154630 | AT3G55560.1 | 41.228 | 114 | 65 | 1 | 130 | 243 | 118 | 229 | 3.31e-17 | 81.3 |
| Msa1154630 | AT5G28590.1 | 35.897 | 156 | 69 | 3 | 123 | 271 | 26 | 157 | 1.26e-16 | 78.2 |
| Msa1154630 | AT2G42940.1 | 43.750 | 112 | 60 | 1 | 132 | 243 | 85 | 193 | 3.95e-16 | 77.4 |
| Msa1154630 | AT1G76500.1 | 36.066 | 122 | 66 | 2 | 130 | 242 | 102 | 220 | 3.84e-15 | 75.5 |
| Msa1154630 | AT2G35270.1 | 37.879 | 132 | 70 | 3 | 130 | 253 | 108 | 235 | 5.37e-15 | 74.7 |
| Msa1154630 | AT4G17800.1 | 47.761 | 67 | 35 | 0 | 130 | 196 | 112 | 178 | 7.09e-15 | 74.3 |
| Msa1154630 | AT4G14465.1 | 43.284 | 67 | 38 | 0 | 130 | 196 | 97 | 163 | 7.90e-15 | 73.9 |
| Msa1154630 | AT2G45430.1 | 39.850 | 133 | 66 | 3 | 130 | 251 | 119 | 248 | 1.25e-13 | 70.9 |
| Msa1154630 | AT4G22810.1 | 36.496 | 137 | 79 | 3 | 130 | 263 | 135 | 266 | 1.51e-13 | 70.9 |
| Msa1154630 | AT4G12050.1 | 37.313 | 134 | 78 | 3 | 130 | 262 | 148 | 276 | 6.58e-13 | 68.9 |
| Msa1154630 | AT3G04570.1 | 38.843 | 121 | 63 | 2 | 130 | 242 | 110 | 227 | 6.69e-13 | 68.9 |
| Msa1154630 | AT4G35390.1 | 39.130 | 115 | 65 | 2 | 130 | 242 | 93 | 204 | 4.82e-12 | 66.2 |
Find 121 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATTATGAGTAGGCTAATT+TGG | 0.202437 | 7_4:-42158532 | Msa1154630:three_prime_UTR |
| CGGCCTTTCGCCGAGAAAAC+TGG | 0.203722 | 7_4:-42158879 | Msa1154630:CDS |
| GAATATCCAGTGTTTGATTT+TGG | 0.212090 | 7_4:-42161766 | Msa1154630:intron |
| GGTGATGCATAATCAGATTT+TGG | 0.214232 | 7_4:+42159027 | None:intergenic |
| GATTATCATCTTTAATTATC+AGG | 0.247738 | 7_4:+42158796 | None:intergenic |
| CTTCGGTTTCCCCTGCTTCC+CGG | 0.257402 | 7_4:+42160609 | None:intergenic |
| TTCTGGTCTTGTTGGTTACT+TGG | 0.258958 | 7_4:+42159060 | None:intergenic |
| TGGTGTATCACCGGTGAGTC+TGG | 0.259451 | 7_4:-42160764 | Msa1154630:CDS |
| AGGGGTAGACCAAGGAAATA+TGG | 0.299572 | 7_4:-42160712 | Msa1154630:CDS |
| TGTTTCGAACGTGCTATCTA+TGG | 0.308201 | 7_4:-42158684 | Msa1154630:three_prime_UTR |
| GATGAAAATTCATTAGAAAA+AGG | 0.314880 | 7_4:+42160631 | None:intergenic |
| CTTCGTCAGCCTGATTCTTC+TGG | 0.325349 | 7_4:-42160052 | Msa1154630:CDS |
| GTCGTAGGCGGTGGAGTTGC+CGG | 0.328102 | 7_4:-42159609 | Msa1154630:CDS |
| CATGTAACTGTTCCTGAATC+TGG | 0.348264 | 7_4:-42160799 | Msa1154630:CDS |
| ACCAGAGGATTCGCGATTGC+GGG | 0.352180 | 7_4:+42158771 | None:intergenic |
| AGGTTTGAGTTTAATGTTCC+CGG | 0.369334 | 7_4:+42158913 | None:intergenic |
| CAGACCGGCTTCTTGTTCCT+TGG | 0.373154 | 7_4:+42159670 | None:intergenic |
| TGGGTTGGAGCTTCACTCCT+TGG | 0.378803 | 7_4:+42160823 | None:intergenic |
| TTTGAGATACTTTCACTGTC+TGG | 0.394509 | 7_4:-42159714 | Msa1154630:CDS |
| AGAGCCACATTACCAGATTC+AGG | 0.396775 | 7_4:+42160787 | None:intergenic |
| GTTGCAGCTTTCATTGAGTC+TGG | 0.409280 | 7_4:+42158838 | None:intergenic |
| TTTGGTTTGATTGTATTAAG+AGG | 0.414198 | 7_4:-42160939 | Msa1154630:five_prime_UTR |
| GAGGAACAATTAAGAAGAAA+AGG | 0.421117 | 7_4:-42160732 | Msa1154630:CDS |
| GCATACCTCGCCTGCATTGA+CGG | 0.421805 | 7_4:+42160274 | None:intergenic |
| AGGAACAATTAAGAAGAAAA+GGG | 0.426921 | 7_4:-42160731 | Msa1154630:CDS |
| TGCTTGAACTCCATCCCCTT+CGG | 0.429863 | 7_4:+42160592 | None:intergenic |
| TGGACATCTACTGCAAAATC+CGG | 0.432504 | 7_4:-42158932 | Msa1154630:CDS |
| GCTTCTTGTTCCTTGGTTGT+CGG | 0.436064 | 7_4:+42159677 | None:intergenic |
| CCGTCTGGCCCATATTTCCT+TGG | 0.437334 | 7_4:+42160703 | None:intergenic |
| TTCAGGAACAGTTACATGTT+GGG | 0.439234 | 7_4:+42160804 | None:intergenic |
| GGTGCTGAATACACTGCAAT+AGG | 0.440699 | 7_4:+42158991 | None:intergenic |
| TGAACTAGTTAAGTTGTAGA+AGG | 0.447769 | 7_4:-42161852 | Msa1154630:intron |
| AAAGTTCCGCCAGAAGAATC+AGG | 0.448010 | 7_4:+42160043 | None:intergenic |
| AGCTCCATCAACTTATCATA+TGG | 0.455470 | 7_4:-42160848 | Msa1154630:CDS |
| CAAGGAACAAGAAGCCGGTC+TGG | 0.455999 | 7_4:-42159669 | Msa1154630:CDS |
| ACTCTTTCACCATTGGTTGA+AGG | 0.464058 | 7_4:+42158967 | None:intergenic |
| TACATCAACTCTTTCACCAT+TGG | 0.465815 | 7_4:+42158960 | None:intergenic |
| TGTAGCTGCCACTCCTGTGC+AGG | 0.467741 | 7_4:-42159580 | Msa1154630:intron |
| TAGTTTGATATTTGCATGGA+GGG | 0.470634 | 7_4:-42160913 | Msa1154630:exon |
| CATGATTAAGTCCTCTAGTA+AGG | 0.471279 | 7_4:-42158578 | Msa1154630:three_prime_UTR |
| ATCTATGGTCTAATTACCTT+AGG | 0.472391 | 7_4:-42158669 | Msa1154630:three_prime_UTR |
| TCGCGGTCCTTGTTGCGAAA+AGG | 0.476324 | 7_4:+42160120 | None:intergenic |
| GTTTCAGGACATTACAATGA+AGG | 0.478893 | 7_4:-42160149 | Msa1154630:intron |
| TAGTCAACTATTTCATCCTA+AGG | 0.480719 | 7_4:+42158653 | None:intergenic |
| GATGGTCGTGTCGTAGGCGG+TGG | 0.481762 | 7_4:-42159618 | Msa1154630:CDS |
| TTGGTTTGATTGTATTAAGA+GGG | 0.482271 | 7_4:-42160938 | Msa1154630:five_prime_UTR |
| AAAGGAGCTGAAGACGAGAT+TGG | 0.485690 | 7_4:+42160649 | None:intergenic |
| AAATCACGCCACTAGCAGAT+AGG | 0.488464 | 7_4:+42160086 | None:intergenic |
| CTTGTTCCTTGGTTGTCGGT+AGG | 0.489709 | 7_4:+42159681 | None:intergenic |
| CGGGAAGCAGGGGAAACCGA+AGG | 0.493245 | 7_4:-42160608 | Msa1154630:CDS |
| ACCCGCAATCGCGAATCCTC+TGG | 0.494992 | 7_4:-42158772 | Msa1154630:three_prime_UTR |
| AACACTGGAGTAACAGTGAT+AGG | 0.495781 | 7_4:-42160877 | Msa1154630:CDS |
| TCGGCGAAAGGCCGAGGGAG+AGG | 0.505477 | 7_4:+42158888 | None:intergenic |
| TGTTACTTCTGAAGGCGACT+CGG | 0.506864 | 7_4:-42160327 | Msa1154630:intron |
| GCAGGGGAAACCGAAGGGGA+TGG | 0.507174 | 7_4:-42160602 | Msa1154630:CDS |
| TGGCGGAACTTTGACCTATG+AGG | 0.508265 | 7_4:-42160032 | Msa1154630:intron |
| CATATCATTACCGTCAATGC+AGG | 0.510031 | 7_4:-42160284 | Msa1154630:CDS |
| GAATCTGGTAATGTGGCTCT+TGG | 0.513015 | 7_4:-42160784 | Msa1154630:CDS |
| GGGAAGCAGGGGAAACCGAA+GGG | 0.513646 | 7_4:-42160607 | Msa1154630:CDS |
| GGTGTATCACCGGTGAGTCT+GGG | 0.517204 | 7_4:-42160763 | Msa1154630:CDS |
| GGGGTAGACCAAGGAAATAT+GGG | 0.519638 | 7_4:-42160711 | Msa1154630:CDS |
| TGAGAAATATTTACCTGCAC+AGG | 0.521667 | 7_4:+42159567 | None:intergenic |
| AATGATATGCGGCATAAAGT+TGG | 0.521723 | 7_4:+42160298 | None:intergenic |
| GGCCTTTCGCCGAGAAAACT+GGG | 0.523333 | 7_4:-42158878 | Msa1154630:CDS |
| CAAGGAAATATGGGCCAGAC+GGG | 0.524549 | 7_4:-42160702 | Msa1154630:CDS |
| GGAATAGTTTGATATTTGCA+TGG | 0.525055 | 7_4:-42160917 | Msa1154630:exon |
| AAGAACCAGAATCACCTCAT+AGG | 0.526234 | 7_4:+42160018 | None:intergenic |
| CACCAGAGGATTCGCGATTG+CGG | 0.527326 | 7_4:+42158770 | None:intergenic |
| GGAACAGTTACATGTTGGGT+TGG | 0.529114 | 7_4:+42160808 | None:intergenic |
| AGTCCTGATGGTCGTGTCGT+AGG | 0.531638 | 7_4:-42159624 | Msa1154630:CDS |
| TGAATACACTGCAATAGGTT+CGG | 0.535826 | 7_4:+42158996 | None:intergenic |
| CCGCCTACGACACGACCATC+AGG | 0.536498 | 7_4:+42159621 | None:intergenic |
| ATTTGCATGGAGGGGAGAGA+AGG | 0.539913 | 7_4:-42160904 | Msa1154630:exon |
| CTTTCACCATTGGTTGAAGG+TGG | 0.540540 | 7_4:+42158970 | None:intergenic |
| CTCAAACCTTACCTCTCCCT+CGG | 0.547245 | 7_4:-42158899 | Msa1154630:CDS |
| CCGGTGAGTCTGGGAATGGA+TGG | 0.548781 | 7_4:-42160754 | Msa1154630:CDS |
| CCATCCATTCCCAGACTCAC+CGG | 0.548795 | 7_4:+42160754 | None:intergenic |
| ATTCAGGAACAGTTACATGT+TGG | 0.551299 | 7_4:+42160803 | None:intergenic |
| GTTTCTTTGTCAAGTCCTGA+TGG | 0.553718 | 7_4:-42159636 | Msa1154630:CDS |
| AGCTTTCATTGAGTCTGGCA+TGG | 0.553939 | 7_4:+42158843 | None:intergenic |
| CGTCAGCCTGATTCTTCTGG+CGG | 0.554405 | 7_4:-42160049 | Msa1154630:CDS |
| GGTGCCATATGATAAGTTGA+TGG | 0.559304 | 7_4:+42160844 | None:intergenic |
| AAAGCTGGAGCTGATCCTCT+AGG | 0.560051 | 7_4:-42160562 | Msa1154630:intron |
| GGAACAAGAAGCCGGTCTGG+TGG | 0.561728 | 7_4:-42159666 | Msa1154630:CDS |
| AGTTTGATATTTGCATGGAG+GGG | 0.566173 | 7_4:-42160912 | Msa1154630:exon |
| GAAATATGGGCCAGACGGGT+CGG | 0.566885 | 7_4:-42160698 | Msa1154630:CDS |
| GACATACCAAAATCAAACAC+TGG | 0.568378 | 7_4:+42161760 | None:intergenic |
| ACTTCTGAAGGCGACTCGGT+CGG | 0.572449 | 7_4:-42160323 | Msa1154630:intron |
| AACAATCTACACGACAACAC+TGG | 0.573109 | 7_4:+42158703 | None:intergenic |
| ATTAAGTCCTCTAGTAAGGT+AGG | 0.573194 | 7_4:-42158574 | Msa1154630:three_prime_UTR |
| GGAACAATTAAGAAGAAAAG+GGG | 0.574284 | 7_4:-42160730 | Msa1154630:CDS |
| CCAAGGAAATATGGGCCAGA+CGG | 0.576724 | 7_4:-42160703 | Msa1154630:CDS |
| GCAATAGGTTCGGTAACAGT+AGG | 0.585437 | 7_4:+42159006 | None:intergenic |
| GCTGAAGACGAGATTGGCAA+TGG | 0.587359 | 7_4:+42160655 | None:intergenic |
| GGACATCTACTGCAAAATCC+GGG | 0.588867 | 7_4:-42158931 | Msa1154630:CDS |
| AGACGGGTCGGTTACTGCTG+TGG | 0.589790 | 7_4:-42160686 | Msa1154630:CDS |
| AGTGGCAGCTACAAGAAGAC+CGG | 0.591724 | 7_4:+42159590 | None:intergenic |
| AATATTTACCTGCACAGGAG+TGG | 0.592423 | 7_4:+42159572 | None:intergenic |
| TGTGGCTCTTGGTGTATCAC+CGG | 0.597362 | 7_4:-42160773 | Msa1154630:CDS |
| CCTGATGGTCGTGTCGTAGG+CGG | 0.605547 | 7_4:-42159621 | Msa1154630:CDS |
| TTATTTGAACATTGTTGTTG+TGG | 0.608317 | 7_4:-42162097 | Msa1154630:five_prime_UTR |
| ATCACCGGTGAGTCTGGGAA+TGG | 0.610318 | 7_4:-42160758 | Msa1154630:CDS |
| TGTTCCTGAATCTGGTAATG+TGG | 0.613189 | 7_4:-42160791 | Msa1154630:CDS |
| AAACACTCATTCCACCAGAC+CGG | 0.616190 | 7_4:+42159655 | None:intergenic |
| GAAAGGCCGAGGGAGAGGTA+AGG | 0.616644 | 7_4:+42158893 | None:intergenic |
| GGAAGCAGGGGAAACCGAAG+GGG | 0.617839 | 7_4:-42160606 | Msa1154630:CDS |
| AATGTGCAAGTATTATGAGT+AGG | 0.623059 | 7_4:-42158541 | Msa1154630:three_prime_UTR |
| ATAGTTTGATATTTGCATGG+AGG | 0.624040 | 7_4:-42160914 | Msa1154630:exon |
| GGGAGAGAAGGTAACAACAC+TGG | 0.626647 | 7_4:-42160892 | Msa1154630:CDS |
| ACAACCAAGGAACAAGAAGC+CGG | 0.627528 | 7_4:-42159674 | Msa1154630:CDS |
| ATATGCATCCTATCTGCTAG+TGG | 0.629472 | 7_4:-42160094 | Msa1154630:CDS |
| GTGAGTCTGGGAATGGATGG+AGG | 0.638692 | 7_4:-42160751 | Msa1154630:CDS |
| TCAGCACCACCTTCAACCAA+TGG | 0.641195 | 7_4:-42158976 | Msa1154630:CDS |
| AGAAGAAAAGGGGTAGACCA+AGG | 0.648040 | 7_4:-42160720 | Msa1154630:CDS |
| GCATCTACCTACCTTACTAG+AGG | 0.648493 | 7_4:+42158567 | None:intergenic |
| GAAAGAGTTGATGTAATGAG+TGG | 0.657296 | 7_4:-42158952 | Msa1154630:CDS |
| GCATTGACGGTAATGATATG+CGG | 0.675288 | 7_4:+42160287 | None:intergenic |
| CAACTTATCATATGGCACCA+AGG | 0.682724 | 7_4:-42160840 | Msa1154630:CDS |
| GATAGGATGCATATAGCTCG+CGG | 0.699011 | 7_4:+42160103 | None:intergenic |
| AATGTAGTCAGCAACACCAG+AGG | 0.703350 | 7_4:+42158756 | None:intergenic |
| TTCATGCCTACCGACAACCA+AGG | 0.742195 | 7_4:-42159687 | Msa1154630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATATTCATAAAAGTTT+TGG | + | chr7_4:42159049-42159068 | None:intergenic | 10.0% |
| !! | TATATTTACATCTTTAATAT+CGG | - | chr7_4:42160599-42160618 | Msa1154630:CDS | 10.0% |
| !!! | GTTAAGAATTATTTTAAGTA+AGG | - | chr7_4:42159012-42159031 | Msa1154630:CDS | 15.0% |
| !!! | TATGATTTTAAAAAACAACT+TGG | + | chr7_4:42159103-42159122 | None:intergenic | 15.0% |
| !!! | TACATTTTTAAATTGGTTTT+TGG | - | chr7_4:42159597-42159616 | Msa1154630:CDS | 15.0% |
| !!! | TTTTCATTTTCATTGATTAT+TGG | - | chr7_4:42160775-42160794 | Msa1154630:CDS | 15.0% |
| !!! | ATTATATTCTGTATTTTATC+AGG | - | chr7_4:42161468-42161487 | Msa1154630:intron | 15.0% |
| !! | CAAATTAAGTACAAAAAAAG+TGG | + | chr7_4:42158678-42158697 | None:intergenic | 20.0% |
| !!! | ATCTCACAAATCTTTTTTAA+TGG | - | chr7_4:42159135-42159154 | Msa1154630:intron | 20.0% |
| !! | AAGAAGGTTTAATACATTTA+TGG | - | chr7_4:42159440-42159459 | Msa1154630:intron | 20.0% |
| !! | AGAAGGTTTAATACATTTAT+GGG | - | chr7_4:42159441-42159460 | Msa1154630:intron | 20.0% |
| !!! | TTCCAAGTACATTTTTAAAT+TGG | - | chr7_4:42159590-42159609 | Msa1154630:CDS | 20.0% |
| !! | AACCAATTTAAAAATGTACT+TGG | + | chr7_4:42159595-42159614 | None:intergenic | 20.0% |
| !! | GATGAAAATTCATTAGAAAA+AGG | + | chr7_4:42159943-42159962 | None:intergenic | 20.0% |
| !!! | TTTTCTAATGAATTTTCATC+CGG | - | chr7_4:42159943-42159962 | Msa1154630:intron | 20.0% |
| !! | AACTACTAACTTACTAATAT+TGG | + | chr7_4:42160086-42160105 | None:intergenic | 20.0% |
| !!! | ACATAATTTTGTTGTATACT+AGG | + | chr7_4:42160209-42160228 | None:intergenic | 20.0% |
| !! | ATCTAATGTTAATTCTTCTT+TGG | - | chr7_4:42160356-42160375 | Msa1154630:intron | 20.0% |
| !! | TCTAATGTTAATTCTTCTTT+GGG | - | chr7_4:42160357-42160376 | Msa1154630:intron | 20.0% |
| !! | TCAATGAAAATGAAAAACTA+TGG | + | chr7_4:42160771-42160790 | None:intergenic | 20.0% |
| !! | TTATCTTTAGTACCATAATA+AGG | + | chr7_4:42161036-42161055 | None:intergenic | 20.0% |
| !!! | ACATAACTTTTATCTACTTA+AGG | - | chr7_4:42161181-42161200 | Msa1154630:intron | 20.0% |
| !! | TCATATAACTGTTTATGTAT+AGG | + | chr7_4:42161412-42161431 | None:intergenic | 20.0% |
| !! | CAGAATATAATGTATTTGTT+AGG | + | chr7_4:42161459-42161478 | None:intergenic | 20.0% |
| !!! | ATTTTGGTTTCTTTATTTTC+TGG | + | chr7_4:42161531-42161550 | None:intergenic | 20.0% |
| !! | GATTATCATCTTTAATTATC+AGG | + | chr7_4:42161778-42161797 | None:intergenic | 20.0% |
| !! | TTATTTGAACATTGTTGTTG+TGG | - | chr7_4:42158474-42158493 | Msa1154630:three_prime_UTR | 25.0% |
| ! | AGCTTCTTGAATTGAAAAAT+GGG | + | chr7_4:42158562-42158581 | None:intergenic | 25.0% |
| ! | AAGCTTCTTGAATTGAAAAA+TGG | + | chr7_4:42158563-42158582 | None:intergenic | 25.0% |
| !!! | TTTTTCAATTCAAGAAGCTT+TGG | - | chr7_4:42158563-42158582 | Msa1154630:three_prime_UTR | 25.0% |
| ! | GAAGTTGAAAAAAATTCTGT+TGG | + | chr7_4:42158602-42158621 | None:intergenic | 25.0% |
| !!! | AACTTCTGAAATTTGTAAGT+TGG | - | chr7_4:42158616-42158635 | Msa1154630:three_prime_UTR | 25.0% |
| !!! | TAAGTTGGTTTTGAATTTCT+GGG | - | chr7_4:42158631-42158650 | Msa1154630:three_prime_UTR | 25.0% |
| ! | AGTACAAAAAAAGTGGAAAA+AGG | + | chr7_4:42158671-42158690 | None:intergenic | 25.0% |
| !!! | TTTCTGTCTTTTGAAAGTTT+TGG | - | chr7_4:42158896-42158915 | Msa1154630:CDS | 25.0% |
| ! | TTCTGTTTATAGTAAAGCTT+TGG | - | chr7_4:42158949-42158968 | Msa1154630:CDS | 25.0% |
| !!! | TTTGGTTTGATTGTATTAAG+AGG | - | chr7_4:42159632-42159651 | Msa1154630:CDS | 25.0% |
| !! | TTGGTTTGATTGTATTAAGA+GGG | - | chr7_4:42159633-42159652 | Msa1154630:CDS | 25.0% |
| ! | AGGAACAATTAAGAAGAAAA+GGG | - | chr7_4:42159840-42159859 | Msa1154630:intron | 25.0% |
| !! | TTTCTAATGAATTTTCATCC+GGG | - | chr7_4:42159944-42159963 | Msa1154630:intron | 25.0% |
| ! | ATCAAATCAAAAATACCTAG+AGG | + | chr7_4:42160027-42160046 | None:intergenic | 25.0% |
| !!! | TAGTAGTTAAGTTAGTTTTC+AGG | - | chr7_4:42160098-42160117 | Msa1154630:CDS | 25.0% |
| !!! | AGTAGTTAAGTTAGTTTTCA+GGG | - | chr7_4:42160099-42160118 | Msa1154630:CDS | 25.0% |
| !!! | GGTATGAATTTTGTTTTGAT+TGG | - | chr7_4:42160796-42160815 | Msa1154630:CDS | 25.0% |
| ! | TTAGTACCATAATAAGGATA+GGG | + | chr7_4:42161030-42161049 | None:intergenic | 25.0% |
| ! | TTTAGTACCATAATAAGGAT+AGG | + | chr7_4:42161031-42161050 | None:intergenic | 25.0% |
| ! | AATCTTCAATGTGTAGTATA+CGG | - | chr7_4:42161127-42161146 | Msa1154630:intron | 25.0% |
| ! | TTATTTGAACTTACTACTAC+TGG | - | chr7_4:42161219-42161238 | Msa1154630:intron | 25.0% |
| ! | AAATAGTTGAAAACAGCTTA+TGG | + | chr7_4:42161300-42161319 | None:intergenic | 25.0% |
| !! | ATATTCTGTATTTTATCAGG+TGG | - | chr7_4:42161471-42161490 | Msa1154630:intron | 25.0% |
| TTGAAAAAAATTCTGTTGGC+TGG | + | chr7_4:42158598-42158617 | None:intergenic | 30.0% | |
| !!! | GTAAGTTGGTTTTGAATTTC+TGG | - | chr7_4:42158630-42158649 | Msa1154630:three_prime_UTR | 30.0% |
| ! | TGAACTAGTTAAGTTGTAGA+AGG | - | chr7_4:42158719-42158738 | Msa1154630:three_prime_UTR | 30.0% |
| !! | GAATATCCAGTGTTTGATTT+TGG | - | chr7_4:42158805-42158824 | Msa1154630:exon | 30.0% |
| CTGAAACACAAAACAACTAA+AGG | + | chr7_4:42158875-42158894 | None:intergenic | 30.0% | |
| !!! | TTACACTGTTTTTGAGCTTA+AGG | - | chr7_4:42158990-42159009 | Msa1154630:CDS | 30.0% |
| GCAAATGAAAAACACATGAA+AGG | + | chr7_4:42159396-42159415 | None:intergenic | 30.0% | |
| !! | ACTTTTTAGCATGTTCAAGA+AGG | - | chr7_4:42159424-42159443 | Msa1154630:intron | 30.0% |
| AAATGTACTTGGAAAGCAAA+TGG | + | chr7_4:42159584-42159603 | None:intergenic | 30.0% | |
| GGAATAGTTTGATATTTGCA+TGG | - | chr7_4:42159654-42159673 | Msa1154630:CDS | 30.0% | |
| ATAGTTTGATATTTGCATGG+AGG | - | chr7_4:42159657-42159676 | Msa1154630:CDS | 30.0% | |
| TAGTTTGATATTTGCATGGA+GGG | - | chr7_4:42159658-42159677 | Msa1154630:CDS | 30.0% | |
| GAGGAACAATTAAGAAGAAA+AGG | - | chr7_4:42159839-42159858 | Msa1154630:intron | 30.0% | |
| GGAACAATTAAGAAGAAAAG+GGG | - | chr7_4:42159841-42159860 | Msa1154630:intron | 30.0% | |
| GAAGTAACAACAATAGTTAG+TGG | + | chr7_4:42160233-42160252 | None:intergenic | 30.0% | |
| ! | ACTATTGTTGTTACTTCTGA+AGG | - | chr7_4:42160236-42160255 | Msa1154630:intron | 30.0% |
| !!! | CTTTACTCTTTTGTTGTTTC+AGG | - | chr7_4:42160407-42160426 | Msa1154630:intron | 30.0% |
| ATGAATGTTGAACTTATACG+AGG | + | chr7_4:42160741-42160760 | None:intergenic | 30.0% | |
| GTATAAGTTCAACATTCATG+TGG | - | chr7_4:42160742-42160761 | Msa1154630:CDS | 30.0% | |
| ! | ATGTTTCATTTTATCCCCTA+GGG | - | chr7_4:42160830-42160849 | Msa1154630:CDS | 30.0% |
| !! | TCATGTACACTCATTTTTGT+CGG | - | chr7_4:42161056-42161075 | Msa1154630:intron | 30.0% |
| TTATCTACTTAAGGACTGTT+TGG | - | chr7_4:42161190-42161209 | Msa1154630:intron | 30.0% | |
| !!! | TCTTTATTTTCTGGTCTTGT+TGG | + | chr7_4:42161522-42161541 | None:intergenic | 30.0% |
| ATCTATGGTCTAATTACCTT+AGG | - | chr7_4:42161902-42161921 | Msa1154630:intron | 30.0% | |
| TAGTCAACTATTTCATCCTA+AGG | + | chr7_4:42161921-42161940 | None:intergenic | 30.0% | |
| AATGTGCAAGTATTATGAGT+AGG | - | chr7_4:42162030-42162049 | Msa1154630:five_prime_UTR | 30.0% | |
| GTATTATGAGTAGGCTAATT+TGG | - | chr7_4:42162039-42162058 | Msa1154630:five_prime_UTR | 30.0% | |
| GACATACCAAAATCAAACAC+TGG | + | chr7_4:42158814-42158833 | None:intergenic | 35.0% | |
| !! | TTGAAAGTTTTGGCAAATGC+TGG | - | chr7_4:42158906-42158925 | Msa1154630:CDS | 35.0% |
| TACAAAGTTGAACGCTTGAA+AGG | - | chr7_4:42159213-42159232 | Msa1154630:intron | 35.0% | |
| ! | TTTTGGCATCATGCAGATTT+TGG | - | chr7_4:42159614-42159633 | Msa1154630:CDS | 35.0% |
| AGTTTGATATTTGCATGGAG+GGG | - | chr7_4:42159659-42159678 | Msa1154630:CDS | 35.0% | |
| AGCTCCATCAACTTATCATA+TGG | - | chr7_4:42159723-42159742 | Msa1154630:CDS | 35.0% | |
| TTCAGGAACAGTTACATGTT+GGG | + | chr7_4:42159770-42159789 | None:intergenic | 35.0% | |
| ATTCAGGAACAGTTACATGT+TGG | + | chr7_4:42159771-42159790 | None:intergenic | 35.0% | |
| !! | CACTAAAAGTGTTTCAAGGA+GGG | + | chr7_4:42160137-42160156 | None:intergenic | 35.0% |
| !! | ACACTAAAAGTGTTTCAAGG+AGG | + | chr7_4:42160138-42160157 | None:intergenic | 35.0% |
| AATGATATGCGGCATAAAGT+TGG | + | chr7_4:42160276-42160295 | None:intergenic | 35.0% | |
| GTTTCAGGACATTACAATGA+AGG | - | chr7_4:42160422-42160441 | Msa1154630:intron | 35.0% | |
| ! | GTTATATCCTTTTCGCAACA+AGG | - | chr7_4:42160444-42160463 | Msa1154630:intron | 35.0% |
| AAACCTCTGTCACACAAAAT+AGG | - | chr7_4:42160636-42160655 | Msa1154630:CDS | 35.0% | |
| ACACAAAATAGGACTTCGTT+CGG | - | chr7_4:42160647-42160666 | Msa1154630:CDS | 35.0% | |
| AACTTCAAGCAACATTCATG+TGG | - | chr7_4:42160690-42160709 | Msa1154630:CDS | 35.0% | |
| ! | CATGTTTCATTTTATCCCCT+AGG | - | chr7_4:42160829-42160848 | Msa1154630:CDS | 35.0% |
| ! | TTTGAGATACTTTCACTGTC+TGG | - | chr7_4:42160857-42160876 | Msa1154630:CDS | 35.0% |
| TGAGAAATATTTACCTGCAC+AGG | + | chr7_4:42161007-42161026 | None:intergenic | 35.0% | |
| TTCTCACCCTATCCTTATTA+TGG | - | chr7_4:42161021-42161040 | Msa1154630:intron | 35.0% | |
| !! | TACACTCATTTTTGTCGGTA+GGG | - | chr7_4:42161061-42161080 | Msa1154630:intron | 35.0% |
| !! | GTTGTTTTCATAAGCAATCC+TGG | + | chr7_4:42161334-42161353 | None:intergenic | 35.0% |
| ! | GTATTTTATCAGGTGGTTGT+TGG | - | chr7_4:42161478-42161497 | Msa1154630:intron | 35.0% |
| ! | GGTGATGCATAATCAGATTT+TGG | + | chr7_4:42161547-42161566 | None:intergenic | 35.0% |
| TGAATACACTGCAATAGGTT+CGG | + | chr7_4:42161578-42161597 | None:intergenic | 35.0% | |
| TACATCAACTCTTTCACCAT+TGG | + | chr7_4:42161614-42161633 | None:intergenic | 35.0% | |
| !! | GAAAGAGTTGATGTAATGAG+TGG | - | chr7_4:42161619-42161638 | Msa1154630:intron | 35.0% |
| ! | AGGTTTGAGTTTAATGTTCC+CGG | + | chr7_4:42161661-42161680 | None:intergenic | 35.0% |
| CATGATTAAGTCCTCTAGTA+AGG | - | chr7_4:42161993-42162012 | Msa1154630:five_prime_UTR | 35.0% | |
| ATTAAGTCCTCTAGTAAGGT+AGG | - | chr7_4:42161997-42162016 | Msa1154630:five_prime_UTR | 35.0% | |
| GGAAAAAGGTAAGAAACAGC+TGG | + | chr7_4:42158657-42158676 | None:intergenic | 40.0% | |
| TGCAATATGTTTAGCGCAAG+TGG | - | chr7_4:42159490-42159509 | Msa1154630:intron | 40.0% | |
| ATATGTTTAGCGCAAGTGGT+TGG | - | chr7_4:42159494-42159513 | Msa1154630:intron | 40.0% | |
| AGAAATCGAACTCAGTAACC+CGG | + | chr7_4:42159548-42159567 | None:intergenic | 40.0% | |
| AACACTGGAGTAACAGTGAT+AGG | - | chr7_4:42159694-42159713 | Msa1154630:CDS | 40.0% | |
| ! | GGTGCCATATGATAAGTTGA+TGG | + | chr7_4:42159730-42159749 | None:intergenic | 40.0% |
| CAACTTATCATATGGCACCA+AGG | - | chr7_4:42159731-42159750 | Msa1154630:intron | 40.0% | |
| CATGTAACTGTTCCTGAATC+TGG | - | chr7_4:42159772-42159791 | Msa1154630:intron | 40.0% | |
| ! | TGTTCCTGAATCTGGTAATG+TGG | - | chr7_4:42159780-42159799 | Msa1154630:intron | 40.0% |
| TTCAAGCAGTCGAAAAAAGC+TGG | - | chr7_4:42159994-42160013 | Msa1154630:intron | 40.0% | |
| !! | AGTTTTCAGGGTTTGAACAC+CGG | - | chr7_4:42160111-42160130 | Msa1154630:CDS | 40.0% |
| !! | GGGACACTAAAAGTGTTTCA+AGG | + | chr7_4:42160141-42160160 | None:intergenic | 40.0% |
| ! | GCATTGACGGTAATGATATG+CGG | + | chr7_4:42160287-42160306 | None:intergenic | 40.0% |
| CATATCATTACCGTCAATGC+AGG | - | chr7_4:42160287-42160306 | Msa1154630:CDS | 40.0% | |
| ATATGCATCCTATCTGCTAG+TGG | - | chr7_4:42160477-42160496 | Msa1154630:intron | 40.0% | |
| TTTGACCTATGAGGTGATTC+TGG | - | chr7_4:42160548-42160567 | Msa1154630:intron | 40.0% | |
| AAGAACCAGAATCACCTCAT+AGG | + | chr7_4:42160556-42160575 | None:intergenic | 40.0% | |
| ! | AGTCCTATTTTGTGTGACAG+AGG | + | chr7_4:42160642-42160661 | None:intergenic | 40.0% |
| AGTATCTCAAAACGACCCTA+GGG | + | chr7_4:42160848-42160867 | None:intergenic | 40.0% | |
| AAGTATCTCAAAACGACCCT+AGG | + | chr7_4:42160849-42160868 | None:intergenic | 40.0% | |
| GTTTCTTTGTCAAGTCCTGA+TGG | - | chr7_4:42160935-42160954 | Msa1154630:five_prime_UTR | 40.0% | |
| AATATTTACCTGCACAGGAG+TGG | + | chr7_4:42161002-42161021 | None:intergenic | 40.0% | |
| !! | GTACACTCATTTTTGTCGGT+AGG | - | chr7_4:42161060-42161079 | Msa1154630:intron | 40.0% |
| ! | TTTTGTCGGTAGGGTTTCAA+CGG | - | chr7_4:42161070-42161089 | Msa1154630:intron | 40.0% |
| !! | GGTTGGTAAGATTGTACTCA+CGG | - | chr7_4:42161103-42161122 | Msa1154630:intron | 40.0% |
| TAAGTACTTGTGAGCCTGTT+TGG | - | chr7_4:42161244-42161263 | Msa1154630:intron | 40.0% | |
| AAGTACTTGTGAGCCTGTTT+GGG | - | chr7_4:42161245-42161264 | Msa1154630:intron | 40.0% | |
| AGCCTGTTTGGGAGAATTTA+CGG | - | chr7_4:42161256-42161275 | Msa1154630:intron | 40.0% | |
| TTCCGTAAATTCTCCCAAAC+AGG | + | chr7_4:42161261-42161280 | None:intergenic | 40.0% | |
| !! | TTCTGGTCTTGTTGGTTACT+TGG | + | chr7_4:42161514-42161533 | None:intergenic | 40.0% |
| ! | ACTCTTTCACCATTGGTTGA+AGG | + | chr7_4:42161607-42161626 | None:intergenic | 40.0% |
| TGGACATCTACTGCAAAATC+CGG | - | chr7_4:42161639-42161658 | Msa1154630:intron | 40.0% | |
| ! | GCATGTTAACCCAGTTTTCT+CGG | + | chr7_4:42161705-42161724 | None:intergenic | 40.0% |
| AACAATCTACACGACAACAC+TGG | + | chr7_4:42161871-42161890 | None:intergenic | 40.0% | |
| TGTTTCGAACGTGCTATCTA+TGG | - | chr7_4:42161887-42161906 | Msa1154630:intron | 40.0% | |
| ! | TGCGTGAGTGTTGTAAATCC+CGG | - | chr7_4:42159526-42159545 | Msa1154630:intron | 45.0% |
| GAAATCGAACTCAGTAACCC+GGG | + | chr7_4:42159547-42159566 | None:intergenic | 45.0% | |
| GGAACAGTTACATGTTGGGT+TGG | + | chr7_4:42159766-42159785 | None:intergenic | 45.0% | |
| AGAGCCACATTACCAGATTC+AGG | + | chr7_4:42159787-42159806 | None:intergenic | 45.0% | |
| ! | GAATCTGGTAATGTGGCTCT+TGG | - | chr7_4:42159787-42159806 | Msa1154630:intron | 45.0% |
| AGAAGAAAAGGGGTAGACCA+AGG | - | chr7_4:42159851-42159870 | Msa1154630:intron | 45.0% | |
| AGGGGTAGACCAAGGAAATA+TGG | - | chr7_4:42159859-42159878 | Msa1154630:intron | 45.0% | |
| GGGGTAGACCAAGGAAATAT+GGG | - | chr7_4:42159860-42159879 | Msa1154630:intron | 45.0% | |
| AAAGGAGCTGAAGACGAGAT+TGG | + | chr7_4:42159925-42159944 | None:intergenic | 45.0% | |
| ! | TGAATTTTCATCCGGGAAGC+AGG | - | chr7_4:42159951-42159970 | Msa1154630:intron | 45.0% |
| ! | GAATTTTCATCCGGGAAGCA+GGG | - | chr7_4:42159952-42159971 | Msa1154630:intron | 45.0% |
| ! | AATTTTCATCCGGGAAGCAG+GGG | - | chr7_4:42159953-42159972 | Msa1154630:intron | 45.0% |
| !! | AAAAGTGTTTCAAGGAGGGC+CGG | + | chr7_4:42160133-42160152 | None:intergenic | 45.0% |
| ! | TGTTACTTCTGAAGGCGACT+CGG | - | chr7_4:42160244-42160263 | Msa1154630:intron | 45.0% |
| GATAGGATGCATATAGCTCG+CGG | + | chr7_4:42160471-42160490 | None:intergenic | 45.0% | |
| AAATCACGCCACTAGCAGAT+AGG | + | chr7_4:42160488-42160507 | None:intergenic | 45.0% | |
| AAAGTTCCGCCAGAAGAATC+AGG | + | chr7_4:42160531-42160550 | None:intergenic | 45.0% | |
| GTATCTCAAAACGACCCTAG+GGG | + | chr7_4:42160847-42160866 | None:intergenic | 45.0% | |
| GCTTCTTGTTCCTTGGTTGT+CGG | + | chr7_4:42160897-42160916 | None:intergenic | 45.0% | |
| ACAACCAAGGAACAAGAAGC+CGG | - | chr7_4:42160897-42160916 | Msa1154630:CDS | 45.0% | |
| AAACACTCATTCCACCAGAC+CGG | + | chr7_4:42160919-42160938 | None:intergenic | 45.0% | |
| TTTGTCGGTAGGGTTTCAAC+GGG | - | chr7_4:42161071-42161090 | Msa1154630:intron | 45.0% | |
| ! | ACTATTTCCGTTAGCTCTCC+AGG | - | chr7_4:42161313-42161332 | Msa1154630:intron | 45.0% |
| AAGCAATCCTGGAGAGCTAA+CGG | + | chr7_4:42161323-42161342 | None:intergenic | 45.0% | |
| ! | GCAATAGGTTCGGTAACAGT+AGG | + | chr7_4:42161568-42161587 | None:intergenic | 45.0% |
| ! | GGTGCTGAATACACTGCAAT+AGG | + | chr7_4:42161583-42161602 | None:intergenic | 45.0% |
| ! | CTTTCACCATTGGTTGAAGG+TGG | + | chr7_4:42161604-42161623 | None:intergenic | 45.0% |
| GGACATCTACTGCAAAATCC+GGG | - | chr7_4:42161640-42161659 | Msa1154630:intron | 45.0% | |
| AGCTTTCATTGAGTCTGGCA+TGG | + | chr7_4:42161731-42161750 | None:intergenic | 45.0% | |
| GTTGCAGCTTTCATTGAGTC+TGG | + | chr7_4:42161736-42161755 | None:intergenic | 45.0% | |
| AATGTAGTCAGCAACACCAG+AGG | + | chr7_4:42161818-42161837 | None:intergenic | 45.0% | |
| GCATCTACCTACCTTACTAG+AGG | + | chr7_4:42162007-42162026 | None:intergenic | 45.0% | |
| ! | GCGTGAGTGTTGTAAATCCC+GGG | - | chr7_4:42159527-42159546 | Msa1154630:intron | 50.0% |
| ATTTGCATGGAGGGGAGAGA+AGG | - | chr7_4:42159667-42159686 | Msa1154630:CDS | 50.0% | |
| GGGAGAGAAGGTAACAACAC+TGG | - | chr7_4:42159679-42159698 | Msa1154630:CDS | 50.0% | |
| ! | TGTGGCTCTTGGTGTATCAC+CGG | - | chr7_4:42159798-42159817 | Msa1154630:intron | 50.0% |
| CCAAGGAAATATGGGCCAGA+CGG | - | chr7_4:42159868-42159887 | Msa1154630:intron | 50.0% | |
| CAAGGAAATATGGGCCAGAC+GGG | - | chr7_4:42159869-42159888 | Msa1154630:intron | 50.0% | |
| GCTGAAGACGAGATTGGCAA+TGG | + | chr7_4:42159919-42159938 | None:intergenic | 50.0% | |
| TGCTTGAACTCCATCCCCTT+CGG | + | chr7_4:42159982-42160001 | None:intergenic | 50.0% | |
| AAAGCTGGAGCTGATCCTCT+AGG | - | chr7_4:42160009-42160028 | Msa1154630:intron | 50.0% | |
| TAGCTCGGTTGGCAAGCTAA+GGG | + | chr7_4:42160161-42160180 | None:intergenic | 50.0% | |
| ATAGCTCGGTTGGCAAGCTA+AGG | + | chr7_4:42160162-42160181 | None:intergenic | 50.0% | |
| ACCATCCCTCGCAAATAGCT+CGG | + | chr7_4:42160176-42160195 | None:intergenic | 50.0% | |
| CTTCGTCAGCCTGATTCTTC+TGG | - | chr7_4:42160519-42160538 | Msa1154630:intron | 50.0% | |
| TGGCGGAACTTTGACCTATG+AGG | - | chr7_4:42160539-42160558 | Msa1154630:intron | 50.0% | |
| TTCATGCCTACCGACAACCA+AGG | - | chr7_4:42160884-42160903 | Msa1154630:CDS | 50.0% | |
| CTTGTTCCTTGGTTGTCGGT+AGG | + | chr7_4:42160893-42160912 | None:intergenic | 50.0% | |
| AGTGGCAGCTACAAGAAGAC+CGG | + | chr7_4:42160984-42161003 | None:intergenic | 50.0% | |
| TTGTCGGTAGGGTTTCAACG+GGG | - | chr7_4:42161072-42161091 | Msa1154630:intron | 50.0% | |
| TCAGCACCACCTTCAACCAA+TGG | - | chr7_4:42161595-42161614 | Msa1154630:intron | 50.0% | |
| CTCAAACCTTACCTCTCCCT+CGG | - | chr7_4:42161672-42161691 | Msa1154630:intron | 50.0% | |
| ! | AACCCAGTTTTCTCGGCGAA+AGG | + | chr7_4:42161698-42161717 | None:intergenic | 50.0% |
| ! | TGGGTTGGAGCTTCACTCCT+TGG | + | chr7_4:42159751-42159770 | None:intergenic | 55.0% |
| TGGTGTATCACCGGTGAGTC+TGG | - | chr7_4:42159807-42159826 | Msa1154630:intron | 55.0% | |
| GGTGTATCACCGGTGAGTCT+GGG | - | chr7_4:42159808-42159827 | Msa1154630:intron | 55.0% | |
| ATCACCGGTGAGTCTGGGAA+TGG | - | chr7_4:42159813-42159832 | Msa1154630:intron | 55.0% | |
| CCATCCATTCCCAGACTCAC+CGG | + | chr7_4:42159820-42159839 | None:intergenic | 55.0% | |
| GTGAGTCTGGGAATGGATGG+AGG | - | chr7_4:42159820-42159839 | Msa1154630:intron | 55.0% | |
| CCGTCTGGCCCATATTTCCT+TGG | + | chr7_4:42159871-42159890 | None:intergenic | 55.0% | |
| GAAATATGGGCCAGACGGGT+CGG | - | chr7_4:42159873-42159892 | Msa1154630:intron | 55.0% | |
| TGCCAACCGAGCTATTTGCG+AGG | - | chr7_4:42160167-42160186 | Msa1154630:intron | 55.0% | |
| GCCAACCGAGCTATTTGCGA+GGG | - | chr7_4:42160168-42160187 | Msa1154630:intron | 55.0% | |
| TCCCTCGCAAATAGCTCGGT+TGG | + | chr7_4:42160172-42160191 | None:intergenic | 55.0% | |
| ACCGAGCTATTTGCGAGGGA+TGG | - | chr7_4:42160172-42160191 | Msa1154630:intron | 55.0% | |
| !! | ACTTCTGAAGGCGACTCGGT+CGG | - | chr7_4:42160248-42160267 | Msa1154630:intron | 55.0% |
| CATTACCGTCAATGCAGGCG+AGG | - | chr7_4:42160292-42160311 | Msa1154630:CDS | 55.0% | |
| GCATACCTCGCCTGCATTGA+CGG | + | chr7_4:42160300-42160319 | None:intergenic | 55.0% | |
| TCGCGGTCCTTGTTGCGAAA+AGG | + | chr7_4:42160454-42160473 | None:intergenic | 55.0% | |
| CGTCAGCCTGATTCTTCTGG+CGG | - | chr7_4:42160522-42160541 | Msa1154630:intron | 55.0% | |
| ! | CAGACCGGCTTCTTGTTCCT+TGG | + | chr7_4:42160904-42160923 | None:intergenic | 55.0% |
| CAAGGAACAAGAAGCCGGTC+TGG | - | chr7_4:42160902-42160921 | Msa1154630:exon | 55.0% | |
| AGTCCTGATGGTCGTGTCGT+AGG | - | chr7_4:42160947-42160966 | Msa1154630:intron | 55.0% | |
| TGTCGGTAGGGTTTCAACGG+GGG | - | chr7_4:42161073-42161092 | Msa1154630:intron | 55.0% | |
| ! | TTTTCTCGGCGAAAGGCCGA+GGG | + | chr7_4:42161691-42161710 | None:intergenic | 55.0% |
| GGCCTTTCGCCGAGAAAACT+GGG | - | chr7_4:42161693-42161712 | Msa1154630:intron | 55.0% | |
| ACCAGAGGATTCGCGATTGC+GGG | + | chr7_4:42161803-42161822 | None:intergenic | 55.0% | |
| CACCAGAGGATTCGCGATTG+CGG | + | chr7_4:42161804-42161823 | None:intergenic | 55.0% | |
| CCGGTGAGTCTGGGAATGGA+TGG | - | chr7_4:42159817-42159836 | Msa1154630:intron | 60.0% | |
| ACAGCAGTAACCGACCCGTC+TGG | + | chr7_4:42159886-42159905 | None:intergenic | 60.0% | |
| AGACGGGTCGGTTACTGCTG+TGG | - | chr7_4:42159885-42159904 | Msa1154630:intron | 60.0% | |
| CTTCGGTTTCCCCTGCTTCC+CGG | + | chr7_4:42159965-42159984 | None:intergenic | 60.0% | |
| GGGAAGCAGGGGAAACCGAA+GGG | - | chr7_4:42159964-42159983 | Msa1154630:intron | 60.0% | |
| GGAAGCAGGGGAAACCGAAG+GGG | - | chr7_4:42159965-42159984 | Msa1154630:intron | 60.0% | |
| GGAACAAGAAGCCGGTCTGG+TGG | - | chr7_4:42160905-42160924 | Msa1154630:exon | 60.0% | |
| CCTGATGGTCGTGTCGTAGG+CGG | - | chr7_4:42160950-42160969 | Msa1154630:intron | 60.0% | |
| TGTAGCTGCCACTCCTGTGC+AGG | - | chr7_4:42160991-42161010 | Msa1154630:intron | 60.0% | |
| GGTTTCAACGGGGGACGAGT+TGG | - | chr7_4:42161082-42161101 | Msa1154630:intron | 60.0% | |
| !! | TCAACGGGGGACGAGTTGGT+TGG | - | chr7_4:42161086-42161105 | Msa1154630:intron | 60.0% |
| GAAAGGCCGAGGGAGAGGTA+AGG | + | chr7_4:42161681-42161700 | None:intergenic | 60.0% | |
| ! | GTTTTCTCGGCGAAAGGCCG+AGG | + | chr7_4:42161692-42161711 | None:intergenic | 60.0% |
| CGGCCTTTCGCCGAGAAAAC+TGG | - | chr7_4:42161692-42161711 | Msa1154630:intron | 60.0% | |
| ACCCGCAATCGCGAATCCTC+TGG | - | chr7_4:42161799-42161818 | Msa1154630:five_prime_UTR | 60.0% | |
| CGGGAAGCAGGGGAAACCGA+AGG | - | chr7_4:42159963-42159982 | Msa1154630:intron | 65.0% | |
| GCAGGGGAAACCGAAGGGGA+TGG | - | chr7_4:42159969-42159988 | Msa1154630:intron | 65.0% | |
| CCGCCTACGACACGACCATC+AGG | + | chr7_4:42160953-42160972 | None:intergenic | 65.0% | |
| GATGGTCGTGTCGTAGGCGG+TGG | - | chr7_4:42160953-42160972 | Msa1154630:intron | 65.0% | |
| GTCGTAGGCGGTGGAGTTGC+CGG | - | chr7_4:42160962-42160981 | Msa1154630:intron | 65.0% | |
| TCGGCGAAAGGCCGAGGGAG+AGG | + | chr7_4:42161686-42161705 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 42158434 | 42162159 | 42158434 | ID=Msa1154630;Name=Msa1154630 |
| chr7_4 | mRNA | 42158434 | 42162159 | 42158434 | ID=Msa1154630-mRNA-1;Parent=Msa1154630;Name=Msa1154630-mRNA-1;_AED=0.14;_eAED=0.14;_QI=339|1|1|1|0.66|0.57|7|373|334 |
| chr7_4 | exon | 42158434 | 42159103 | 42158434 | ID=Msa1154630-mRNA-1:exon:10355;Parent=Msa1154630-mRNA-1 |
| chr7_4 | exon | 42159581 | 42159742 | 42159581 | ID=Msa1154630-mRNA-1:exon:10354;Parent=Msa1154630-mRNA-1 |
| chr7_4 | exon | 42160033 | 42160164 | 42160033 | ID=Msa1154630-mRNA-1:exon:10353;Parent=Msa1154630-mRNA-1 |
| chr7_4 | exon | 42160280 | 42160335 | 42160280 | ID=Msa1154630-mRNA-1:exon:10352;Parent=Msa1154630-mRNA-1 |
| chr7_4 | exon | 42160563 | 42160963 | 42160563 | ID=Msa1154630-mRNA-1:exon:10351;Parent=Msa1154630-mRNA-1 |
| chr7_4 | exon | 42161767 | 42161866 | 42161767 | ID=Msa1154630-mRNA-1:exon:10350;Parent=Msa1154630-mRNA-1 |
| chr7_4 | exon | 42161964 | 42162159 | 42161964 | ID=Msa1154630-mRNA-1:exon:10349;Parent=Msa1154630-mRNA-1 |
| chr7_4 | five_prime_UTR | 42161964 | 42162159 | 42161964 | ID=Msa1154630-mRNA-1:five_prime_utr;Parent=Msa1154630-mRNA-1 |
| chr7_4 | five_prime_UTR | 42161767 | 42161866 | 42161767 | ID=Msa1154630-mRNA-1:five_prime_utr;Parent=Msa1154630-mRNA-1 |
| chr7_4 | five_prime_UTR | 42160921 | 42160963 | 42160921 | ID=Msa1154630-mRNA-1:five_prime_utr;Parent=Msa1154630-mRNA-1 |
| chr7_4 | CDS | 42160563 | 42160920 | 42160563 | ID=Msa1154630-mRNA-1:cds;Parent=Msa1154630-mRNA-1 |
| chr7_4 | CDS | 42160280 | 42160335 | 42160280 | ID=Msa1154630-mRNA-1:cds;Parent=Msa1154630-mRNA-1 |
| chr7_4 | CDS | 42160033 | 42160164 | 42160033 | ID=Msa1154630-mRNA-1:cds;Parent=Msa1154630-mRNA-1 |
| chr7_4 | CDS | 42159581 | 42159742 | 42159581 | ID=Msa1154630-mRNA-1:cds;Parent=Msa1154630-mRNA-1 |
| chr7_4 | CDS | 42158807 | 42159103 | 42158807 | ID=Msa1154630-mRNA-1:cds;Parent=Msa1154630-mRNA-1 |
| chr7_4 | three_prime_UTR | 42158434 | 42158806 | 42158434 | ID=Msa1154630-mRNA-1:three_prime_utr;Parent=Msa1154630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
