AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1430630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1430630 MtrunA17_Chr4g0021351 96.639 357 7 1 1 357 1 352 0.0 694
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1430630 AT2G32640.2 64.167 360 124 2 1 357 1 358 7.00e-155 441
Msa1430630 AT2G32640.1 64.167 360 124 2 1 357 1 358 9.07e-151 437

Find 157 sgRNAs with CRISPR-Local

Find 465 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAACAATTCTTCCAATTT+TGG 0.110399 tig0026723:-52603 Msa1430630:intergenic
CCTGTATCATTTGGTGGTTT+TGG 0.172274 tig0026723:+55127 Msa1430630:three_prime_UTR
TTTCAGGTTCTGAAACTTTC+CGG 0.224553 tig0026723:+51554 Msa1430630:intron
GAGATACTGAGAGTTATTTA+TGG 0.228860 tig0026723:+54521 Msa1430630:exon
TACATCAAATGTAATATTAT+TGG 0.229490 tig0026723:-57240 Msa1430630:intergenic
GTAGCTTAGTACCTGGGTTT+TGG 0.242734 tig0026723:-49751 Msa1430630:intergenic
CAACCATGAAGCACTCAAAT+TGG 0.252714 tig0026723:-55555 Msa1430630:intergenic
TTGAGCACTTATCAATATTC+TGG 0.255455 tig0026723:-52645 Msa1430630:intergenic
CTTGATTACAAGCTATAATT+AGG 0.265550 tig0026723:+56926 Msa1430630:three_prime_UTR
TACAGGATGTTGTACAGTTT+GGG 0.266179 tig0026723:+56092 Msa1430630:intron
TCAACCAGGATCGCCAAAAT+TGG 0.275734 tig0026723:+52590 Msa1430630:CDS
CATATCAAGAAAGGAGCTTT+TGG 0.278505 tig0026723:+50538 Msa1430630:CDS
TTGAAAGCAAAGGAGATATC+TGG 0.284111 tig0026723:+50836 Msa1430630:CDS
CAATGGAATATCACAGCTTT+TGG 0.290010 tig0026723:+49659 Msa1430630:CDS
ATGAATCACCTGTTTGAATA+TGG 0.302700 tig0026723:-56170 Msa1430630:intergenic
CATCTTGAGGCATGGAAATA+TGG 0.308537 tig0026723:+56896 Msa1430630:three_prime_UTR
AAGAATTGTTGGAAGAATAC+TGG 0.333269 tig0026723:+52613 Msa1430630:CDS
TTCTGCTGCATTTCTTCTGT+GGG 0.354978 tig0026723:-49695 Msa1430630:intergenic
ACTTGTAGAAGTTGGAATCT+TGG 0.358738 tig0026723:+50562 Msa1430630:CDS
GCTGAATATGACATCACTAT+TGG 0.363591 tig0026723:-52378 Msa1430630:intergenic
TCTGCCACTGCAGGCCTGTT+AGG 0.364108 tig0026723:+51151 Msa1430630:intron
TTCAGGTTCTGAAACTTTCC+GGG 0.368912 tig0026723:+51555 Msa1430630:intron
TTACAGGATGTTGTACAGTT+TGG 0.369217 tig0026723:+56091 Msa1430630:intron
GTATTCCCGTACTACTTGAT+TGG 0.370975 tig0026723:+56623 Msa1430630:three_prime_UTR
GCCAAAATTGGAAGAATTGT+TGG 0.372380 tig0026723:+52602 Msa1430630:CDS
GATGGTGTTTGCCTTGTTGT+TGG 0.380370 tig0026723:+52326 Msa1430630:CDS
GTACATCTTCATTGGTGAAA+AGG 0.386189 tig0026723:-57285 Msa1430630:intergenic
GGAGCTTGACCAGGCATCTT+GGG 0.387112 tig0026723:+55149 Msa1430630:three_prime_UTR
AAGTTCATTGATAAAATCTT+CGG 0.390143 tig0026723:-55618 Msa1430630:intergenic
ACAATCTCTATAAGCCTAAC+AGG 0.394378 tig0026723:-51165 Msa1430630:intergenic
TACACAAGTGACAATGAGTT+TGG 0.395552 tig0026723:-56982 Msa1430630:intergenic
ATTCAATCACCTGTATCATT+TGG 0.400994 tig0026723:+55118 Msa1430630:three_prime_UTR
AAGCTGTGATATTCCATTGA+TGG 0.403396 tig0026723:-49655 Msa1430630:intergenic
AGTGGTGAAGTTGGTGGAGC+TGG 0.403875 tig0026723:+49888 Msa1430630:CDS
AAGATATCCACCTGCAGAAA+TGG 0.404903 tig0026723:-55961 Msa1430630:intergenic
GATCTTGCTGATAAAATAGA+AGG 0.406678 tig0026723:+50299 Msa1430630:CDS
ATCATTAGAGAGAACAAGAA+TGG 0.417870 tig0026723:+50513 Msa1430630:intron
TAGCAGAAAAGTACCATGTA+TGG 0.430522 tig0026723:-55461 Msa1430630:intergenic
GGGAGCTTGACCAGGCATCT+TGG 0.430972 tig0026723:+55148 Msa1430630:three_prime_UTR
AATGCAGCAGAAAAGCATTC+AGG 0.432078 tig0026723:+49706 Msa1430630:CDS
AATGAATCAGTATTTGATAT+AGG 0.432876 tig0026723:-57334 Msa1430630:intergenic
TACATCTTCATTGGTGAAAA+GGG 0.433965 tig0026723:-57284 Msa1430630:intergenic
CTTCAGCTTCAACCCATCAA+TGG 0.436766 tig0026723:+49642 Msa1430630:CDS
AGTTCATTGATAAAATCTTC+GGG 0.439375 tig0026723:-55617 Msa1430630:intergenic
ATTGTACATTTGCAGAGGCT+TGG 0.440783 tig0026723:+55922 Msa1430630:intron
TACATTAATCAGACAAGAAA+AGG 0.444701 tig0026723:+49573 Msa1430630:five_prime_UTR
GCCAAGCATCAGAAAATGTC+TGG 0.448408 tig0026723:-56647 Msa1430630:intergenic
GTCTGCTTGTACATCTTCAT+TGG 0.449669 tig0026723:-57293 Msa1430630:intergenic
TTGCCACCGCCTTGTGCGCA+AGG 0.453601 tig0026723:+50366 Msa1430630:CDS
AAATGTAATATTATTGGCTC+TGG 0.454383 tig0026723:-57234 Msa1430630:intergenic
AGCCCAATTTGAGTGCTTCA+TGG 0.457279 tig0026723:+55552 Msa1430630:intron
AACCATGAAGCACTCAAATT+GGG 0.457347 tig0026723:-55554 Msa1430630:intergenic
TGCCAACTTTAGTTGTATGC+AGG 0.461509 tig0026723:+55646 Msa1430630:three_prime_UTR
CAGGCATTTCCAGCAGGATC+AGG 0.462465 tig0026723:+52525 Msa1430630:intron
TTTCTGCTGCATTTCTTCTG+TGG 0.462769 tig0026723:-49696 Msa1430630:intergenic
TTATTCCTGAGTTCTACAAT+TGG 0.464097 tig0026723:+57142 Msa1430630:three_prime_UTR
CAATCACCTGTATCATTTGG+TGG 0.467842 tig0026723:+55121 Msa1430630:three_prime_UTR
ACTCCCATCCATATTCAAAC+AGG 0.471427 tig0026723:+56162 Msa1430630:three_prime_UTR
TGCAGAAATGGTCGTAGCAC+TGG 0.472109 tig0026723:-55949 Msa1430630:intergenic
ACCCCTTGCGCACAAGGCGG+TGG 0.472573 tig0026723:-50369 Msa1430630:intergenic
AATATGGATGGGAGTATTTG+AGG 0.477513 tig0026723:-56154 Msa1430630:intergenic
AACAAATGTTTGACCATAGC+TGG 0.479762 tig0026723:-49947 Msa1430630:intergenic
TGTATATATTGCAGTTGTGC+AGG 0.480304 tig0026723:+50229 Msa1430630:intron
AACTCACTTAAGAATACTGT+TGG 0.484452 tig0026723:-57101 Msa1430630:intergenic
CACTGGAAACTCGTCTTCGA+TGG 0.484794 tig0026723:-56866 Msa1430630:intergenic
TACTAAAAGCAGCTGGTAGC+GGG 0.489118 tig0026723:-54979 Msa1430630:intergenic
ACAACAAGGCAAACACCATC+AGG 0.489528 tig0026723:-52323 Msa1430630:intergenic
GTTTCTGTGAGTGGTGAAGT+TGG 0.490111 tig0026723:+49879 Msa1430630:CDS
ATCAGCAAAGGTCGCGAGAA+AGG 0.491370 tig0026723:-56677 Msa1430630:intergenic
TCGTCTTATAATTGATGCCA+TGG 0.497926 tig0026723:+51595 Msa1430630:CDS
TGAAAAGATTAGACCAGCTA+TGG 0.501163 tig0026723:+49934 Msa1430630:CDS
TCGAAGACCCCTTGCGCACA+AGG 0.504246 tig0026723:-50375 Msa1430630:intergenic
TTAGTACCTCTCACGATATG+TGG 0.506371 tig0026723:-54552 Msa1430630:intergenic
CCAAAACCACCAAATGATAC+AGG 0.510561 tig0026723:-55127 Msa1430630:intergenic
GTCAATGACATTCTTAATCT+CGG 0.511958 tig0026723:+50859 Msa1430630:CDS
CACCTGCATACAACTAAAGT+TGG 0.512661 tig0026723:-55648 Msa1430630:intergenic
CGTCTTATAATTGATGCCAT+GGG 0.512682 tig0026723:+51596 Msa1430630:CDS
TGCCACCGCCTTGTGCGCAA+GGG 0.514704 tig0026723:+50367 Msa1430630:CDS
TTAGTGTGTGGAGGAACTCT+TGG 0.516722 tig0026723:+50335 Msa1430630:CDS
AACATTTGTTCACCTCAAGA+AGG 0.517427 tig0026723:+49960 Msa1430630:CDS
TCTTCACAGGCATTTCCAGC+AGG 0.518830 tig0026723:+52519 Msa1430630:intron
CTACTAAAAGCAGCTGGTAG+CGG 0.522440 tig0026723:-54980 Msa1430630:intergenic
TGACAGTCTCCCAAGATGCC+TGG 0.524652 tig0026723:-55158 Msa1430630:intergenic
AGAATGGAACATATCAAGAA+AGG 0.528105 tig0026723:+50529 Msa1430630:CDS
ACAATTGGAGCAAGTTAACA+TGG 0.529500 tig0026723:+57157 Msa1430630:three_prime_UTR
TCTGGACCAATCAAGTAGTA+CGG 0.533105 tig0026723:-56629 Msa1430630:intergenic
GGGTCTTCGAGTGGCAATTG+TGG 0.536464 tig0026723:+50388 Msa1430630:CDS
TGAAAGCAAAGGAGATATCT+GGG 0.539774 tig0026723:+50837 Msa1430630:CDS
GTTGTTGGAACCTGCGCGCG+TGG 0.543125 tig0026723:+52341 Msa1430630:CDS
TCAGATGAGGTAAACAAGCT+TGG 0.546384 tig0026723:-50278 Msa1430630:intergenic
ATCACCTGTTTGAATATGGA+TGG 0.547178 tig0026723:-56166 Msa1430630:intergenic
TGGAAAGGAATGTGTTGAAA+GGG 0.548107 tig0026723:+50408 Msa1430630:CDS
GATAAAATCTTCGGGAACAT+CGG 0.552072 tig0026723:-55609 Msa1430630:intergenic
TCAAGAGGACCTGATCCTGC+TGG 0.553182 tig0026723:-52534 Msa1430630:intergenic
CTGGACCAATCAAGTAGTAC+GGG 0.556675 tig0026723:-56628 Msa1430630:intergenic
GCCACCGCCTTGTGCGCAAG+GGG 0.558260 tig0026723:+50368 Msa1430630:CDS
AGCTCAACAGTAAAGAGAGT+TGG 0.561238 tig0026723:+52401 Msa1430630:CDS
TACAGGTGATTGAATACCGC+TGG 0.562675 tig0026723:-55110 Msa1430630:intergenic
GGGGCACTTTCGAAGACACT+AGG 0.562798 tig0026723:+56112 Msa1430630:three_prime_UTR
ACTTTCGAAGACACTAGGCC+TGG 0.566434 tig0026723:+56117 Msa1430630:three_prime_UTR
TGGTTAAACGTGTTCACTTG+TGG 0.567479 tig0026723:+49514 Msa1430630:five_prime_UTR
ATGGAGAGTGTTTCTGTGAG+TGG 0.568571 tig0026723:+49870 Msa1430630:CDS
AGCTGTGATATTCCATTGAT+GGG 0.570069 tig0026723:-49654 Msa1430630:intergenic
TTGCTCCAATTGTAGAACTC+AGG 0.570887 tig0026723:-57147 Msa1430630:intergenic
GTCTCTTCTGAATCCATACA+TGG 0.572113 tig0026723:+55448 Msa1430630:three_prime_UTR
AGATGTGGATTTGAAAGCAA+AGG 0.575048 tig0026723:+50826 Msa1430630:CDS
ATCCTCGTATACATTTATGA+AGG 0.576536 tig0026723:-51241 Msa1430630:intergenic
TCTGTGAGTGGTGAAGTTGG+TGG 0.578179 tig0026723:+49882 Msa1430630:CDS
AAAACTCTACTAAAAGCAGC+TGG 0.581308 tig0026723:-54986 Msa1430630:intergenic
GTGCGCAAGGGGTCTTCGAG+TGG 0.583800 tig0026723:+50379 Msa1430630:CDS
GAGGCATGGAAATATGGAGC+TGG 0.585306 tig0026723:+56902 Msa1430630:three_prime_UTR
AGTGCTACGACCATTTCTGC+AGG 0.589512 tig0026723:+55951 Msa1430630:three_prime_UTR
ACTTGTGTACCAACATGTGT+TGG 0.589656 tig0026723:+56996 Msa1430630:three_prime_UTR
GGAAAAGACATCTTGAGGCA+TGG 0.590434 tig0026723:+56888 Msa1430630:three_prime_UTR
AAAGACTATTACCTCACAGC+AGG 0.591568 tig0026723:-56700 Msa1430630:intergenic
TTGTAGTTTGGTGATGCCAG+CGG 0.595464 tig0026723:+55094 Msa1430630:intron
TGTATGGATTCAGAAGAGAC+AGG 0.596726 tig0026723:-55445 Msa1430630:intergenic
TCATCGAAACCAACACATGT+TGG 0.605457 tig0026723:-57005 Msa1430630:intergenic
AAGTGAACATATAAGTAGTA+CGG 0.605890 tig0026723:-52557 Msa1430630:intergenic
GCGCGCAGGTTCCAACAACA+AGG 0.607237 tig0026723:-52337 Msa1430630:intergenic
TGAACAATGCAGAATAGATG+TGG 0.608301 tig0026723:+50811 Msa1430630:intron
GAGGCCGTGTTAACATAACC+AGG 0.608740 tig0026723:-56135 Msa1430630:intergenic
AAACTCTTGTATCGTTCTCA+CGG 0.609012 tig0026723:-57187 Msa1430630:intergenic
TTCGAGTGGCAATTGTGGAA+AGG 0.609373 tig0026723:+50393 Msa1430630:CDS
ACAGGATGTTGTACAGTTTG+GGG 0.610431 tig0026723:+56093 Msa1430630:intron
CATCTTGGGAGACTGTCAGC+TGG 0.612404 tig0026723:+55163 Msa1430630:three_prime_UTR
GAATGACACAAACCTTCTTG+AGG 0.612660 tig0026723:-49972 Msa1430630:intergenic
TCATATGATGTGTTAGTGTG+TGG 0.613813 tig0026723:+50323 Msa1430630:CDS
GTGGAAAGGAATGTGTTGAA+AGG 0.615227 tig0026723:+50407 Msa1430630:CDS
TTTATCAGCAAGATCAGATG+AGG 0.618931 tig0026723:-50291 Msa1430630:intergenic
GACCTCTTGATAAAATGAGA+TGG 0.621466 tig0026723:-57378 Msa1430630:intergenic
TAGTACCTCTCACGATATGT+GGG 0.624088 tig0026723:-54551 Msa1430630:intergenic
ATCTTCATTGGTGAAAAGGG+AGG 0.625226 tig0026723:-57281 Msa1430630:intergenic
AATACTGATTCATTTCAGCA+TGG 0.626079 tig0026723:+57343 Msa1430630:three_prime_UTR
CTCCTTCATAAATGTATACG+AGG 0.628193 tig0026723:+51239 Msa1430630:CDS
CCAGTGGAAAAGACATCTTG+AGG 0.630050 tig0026723:+56883 Msa1430630:three_prime_UTR
GGTGAAGTTGGTGGAGCTGG+AGG 0.630599 tig0026723:+49891 Msa1430630:CDS
ATATAAGTAGTACGGTCAAG+AGG 0.635127 tig0026723:-52549 Msa1430630:intergenic
CATCGAAGACGAGTTTCCAG+TGG 0.637297 tig0026723:+56867 Msa1430630:three_prime_UTR
GGAATACACGAAGCAATCGA+TGG 0.645915 tig0026723:+55401 Msa1430630:intron
ACTTATGTAGAACCTCAACC+AGG 0.651187 tig0026723:+52576 Msa1430630:CDS
AGCTGTTCCCTCCAAAACCC+AGG 0.652617 tig0026723:+49740 Msa1430630:CDS
AGTATCTCTAGATTGTCAAG+TGG 0.655036 tig0026723:-54506 Msa1430630:intergenic
AGACGTGGGAGGAAGCCTGA+TGG 0.659537 tig0026723:+52308 Msa1430630:CDS
ATTGTAGAGACAATTTGTTG+AGG 0.660221 tig0026723:-50254 Msa1430630:intergenic
AACAGGGGAAAAGTTCCCCA+TGG 0.664926 tig0026723:-51612 Msa1430630:intergenic
TCACCTGTTTGAATATGGAT+GGG 0.672063 tig0026723:-56165 Msa1430630:intergenic
TCTTTCCCACATATCGTGAG+AGG 0.672231 tig0026723:+54546 Msa1430630:three_prime_UTR
CCTCACAGCAGGATCAGCAA+AGG 0.675966 tig0026723:-56689 Msa1430630:intergenic
TCAGGTTCTGAAACTTTCCG+GGG 0.684505 tig0026723:+51556 Msa1430630:intron
AGGAACTATACTTATACACG+TGG 0.684833 tig0026723:+56946 Msa1430630:three_prime_UTR
TATGATGTGTTAGTGTGTGG+AGG 0.689163 tig0026723:+50326 Msa1430630:CDS
TAGGCCTGGTTATGTTAACA+CGG 0.690686 tig0026723:+56131 Msa1430630:three_prime_UTR
GTCTTATAATTGATGCCATG+GGG 0.696240 tig0026723:+51597 Msa1430630:CDS
GGAAAGGAATGTGTTGAAAG+GGG 0.701449 tig0026723:+50409 Msa1430630:CDS
CCTTTGCTGATCCTGCTGTG+AGG 0.715620 tig0026723:+56689 Msa1430630:three_prime_UTR
AAGACCCCTTGCGCACAAGG+CGG 0.736194 tig0026723:-50372 Msa1430620:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATATTGAATTAGTTTAT+GGG - tig0026723:50903-50922 Msa1430630:intergenic 10.0%
!!! TTTTGATCTTTTAATATATA+TGG + tig0026723:53495-53514 Msa1430630:intron 10.0%
!!! AACAACAAAATAAAATTTTA+TGG - tig0026723:54314-54333 Msa1430630:intergenic 10.0%
!! AAGATATGAAATAAATATTT+AGG - tig0026723:54888-54907 Msa1430630:intergenic 10.0%
!!! TTAGTTTTTTTTTTAGTTTA+TGG + tig0026723:55262-55281 Msa1430630:intron 10.0%
!! GTAATAAATAAATATTTCTT+AGG - tig0026723:56075-56094 Msa1430630:intergenic 10.0%
!! AAGAAATATTTATTTATTAC+AGG + tig0026723:56075-56094 Msa1430630:intron 10.0%
!!! TATATTGAATATTTTATCAT+AGG - tig0026723:56541-56560 Msa1430630:intergenic 10.0%
!! AAAAGGAAAGAAAAAAAAAA+GGG + tig0026723:49590-49609 Msa1430630:five_prime_UTR 15.0%
!!! TTGTTTTTTGTTTTTATTAG+AGG + tig0026723:49844-49863 Msa1430630:intron 15.0%
!! AAATAATTTCGAAATACAAA+AGG - tig0026723:50764-50783 Msa1430630:intergenic 15.0%
!!! GTATATATTGAATTAGTTTA+TGG - tig0026723:50904-50923 Msa1430630:intergenic 15.0%
!! GAGAAAAAAAAAATTACAAT+AGG - tig0026723:51133-51152 Msa1430630:intergenic 15.0%
!! AAGATAATTATATCTAAATG+AGG + tig0026723:51357-51376 Msa1430630:intron 15.0%
!! ATTCTGTAAAATTAAAATTG+AGG - tig0026723:52489-52508 Msa1430630:intergenic 15.0%
!! AAATGTATAAAATGTTTCAA+TGG - tig0026723:53273-53292 Msa1430630:intergenic 15.0%
!! TGATTAAAAGTAATTATCAA+AGG - tig0026723:53665-53684 Msa1430630:intergenic 15.0%
!! AGAAATGATTGTAATAATAT+TGG + tig0026723:53834-53853 Msa1430630:intron 15.0%
!! ATAAATATTTGAAGAATGTA+AGG - tig0026723:54364-54383 Msa1430630:intergenic 15.0%
!!! ATTTGCAATTTTTATATGAT+AGG + tig0026723:54478-54497 Msa1430630:intron 15.0%
!!! TTTGCAATTTTTATATGATA+GGG + tig0026723:54479-54498 Msa1430630:intron 15.0%
!!! CCATTTTTTTTTTTATGATA+CGG + tig0026723:54926-54945 Msa1430630:intron 15.0%
!!! ATAATTTTCCAAAACTTTTT+CGG - tig0026723:55288-55307 Msa1430630:intergenic 15.0%
!! TCATTAAATTAAATTGAAGA+AGG - tig0026723:55380-55399 Msa1430630:intergenic 15.0%
!!! TCTTCAATTTAATTTAATGA+AGG + tig0026723:55380-55399 Msa1430630:intron 15.0%
!!! ACTGAAAAATTCTAAAATTT+TGG - tig0026723:56489-56508 Msa1430630:intergenic 15.0%
!! GAATATACAGAATAATAAAA+TGG - tig0026723:56749-56768 Msa1430630:intergenic 15.0%
!!! CTGTTATAATTTTTAGAAAA+TGG - tig0026723:57044-57063 Msa1430630:intergenic 15.0%
!! TACATCAAATGTAATATTAT+TGG - tig0026723:57243-57262 Msa1430630:intergenic 15.0%
!! GAAAAGGAAAGAAAAAAAAA+AGG + tig0026723:49589-49608 Msa1430630:five_prime_UTR 20.0%
!! AAAGGAAAGAAAAAAAAAAG+GGG + tig0026723:49591-49610 Msa1430630:five_prime_UTR 20.0%
!!! TTGTTTTTCTTTGTATCTTA+AGG + tig0026723:49817-49836 Msa1430630:intron 20.0%
!!! TTGTTTTTATTAGAGGATAA+TGG + tig0026723:49851-49870 Msa1430630:intron 20.0%
!! AGTTGAATACTTAAATTAGT+GGG - tig0026723:51082-51101 Msa1430630:intergenic 20.0%
!! TTTCTTTCACATAAATCAAT+TGG - tig0026723:51474-51493 Msa1430630:intergenic 20.0%
!! AAAAAACGAGGAAATATAAA+TGG - tig0026723:51761-51780 Msa1430630:intergenic 20.0%
!! TGATATATGATAGAATACTA+TGG + tig0026723:52057-52076 Msa1430630:intron 20.0%
!! ATTAATCTTTCATTAAATGC+TGG - tig0026723:52230-52249 Msa1430630:intergenic 20.0%
!!! ATTCAAAAGCACAATATTTT+TGG + tig0026723:52426-52445 Msa1430630:CDS 20.0%
!!! TTCAAAAGCACAATATTTTT+GGG + tig0026723:52427-52446 Msa1430630:CDS 20.0%
!! AATGGTATAATTACAACAAT+TGG - tig0026723:52743-52762 Msa1430630:intergenic 20.0%
!!! TTGGTTTTTGTTAGATATTT+AGG + tig0026723:53149-53168 Msa1430630:intron 20.0%
!!! AATCAAGATTTTTATGCTTT+CGG + tig0026723:53680-53699 Msa1430630:intron 20.0%
!!! TTTTACTTTAGTGTCAAATA+TGG + tig0026723:53954-53973 Msa1430630:intron 20.0%
!! AAATTACTACATCAAATATC+AGG + tig0026723:54115-54134 Msa1430630:intron 20.0%
!! AACAACAAATTGAAAAGAAA+TGG - tig0026723:54144-54163 Msa1430630:intergenic 20.0%
!! TTAATTCATTTGTAAGCATA+TGG - tig0026723:54589-54608 Msa1430630:intergenic 20.0%
!! CCGTATCATAAAAAAAAAAA+TGG - tig0026723:54929-54948 Msa1430630:intergenic 20.0%
!! GAAGGAATTATATTATATCA+GGG - tig0026723:55362-55381 Msa1430630:intergenic 20.0%
!! AGAAGGAATTATATTATATC+AGG - tig0026723:55363-55382 Msa1430630:intergenic 20.0%
!!! CTTTTCTGCTAATTTTTAAA+AGG + tig0026723:55473-55492 Msa1430630:intron 20.0%
!! AAGTTCATTGATAAAATCTT+CGG - tig0026723:55621-55640 Msa1430630:intergenic 20.0%
!! AAAAAAGTAATAGTCTAAAG+CGG - tig0026723:56290-56309 Msa1430630:intergenic 20.0%
!! TTGTTTAAATTGTTGTAAGA+TGG + tig0026723:56315-56334 Msa1430630:intron 20.0%
!!! ATTGAATATTTTATCATAGG+AGG - tig0026723:56538-56557 Msa1430630:intergenic 20.0%
!! CTAAATCTTCTATATTGAAA+AGG - tig0026723:56581-56600 Msa1430630:intergenic 20.0%
!! AATAATAAAATGGTTCAGAA+AGG - tig0026723:56739-56758 Msa1430630:intergenic 20.0%
!! AATGAATCAGTATTTGATAT+AGG - tig0026723:57337-57356 Msa1430630:intergenic 20.0%
! TACATTAATCAGACAAGAAA+AGG + tig0026723:49573-49592 Msa1430630:five_prime_UTR 25.0%
! ACCTTATATGTATGGTAAAT+TGG + tig0026723:50185-50204 Msa1430630:intron 25.0%
! ACCAATTTACCATACATATA+AGG - tig0026723:50189-50208 Msa1430630:intergenic 25.0%
!! AGTATATTTGAAGTGTGTTT+AGG - tig0026723:50685-50704 Msa1430630:intergenic 25.0%
! AAATAGCATAAATCCTTAAG+AGG - tig0026723:50733-50752 Msa1430630:intergenic 25.0%
!! TATTGAATTAGTTTATGGGA+AGG - tig0026723:50899-50918 Msa1430630:intergenic 25.0%
! CAATAATTCTAATACTTCAC+AGG - tig0026723:50926-50945 Msa1430630:intergenic 25.0%
! GAGTTGAATACTTAAATTAG+TGG - tig0026723:51083-51102 Msa1430630:intergenic 25.0%
! CTATTGTGAATTATCGTAAT+TGG + tig0026723:51334-51353 Msa1430630:intron 25.0%
!! ACATGCATTATTTCATTTTC+AGG + tig0026723:51538-51557 Msa1430630:intron 25.0%
! TTCATCATGTTATAGTTACA+TGG + tig0026723:51692-51711 Msa1430630:intron 25.0%
! TCATCATGTTATAGTTACAT+GGG + tig0026723:51693-51712 Msa1430630:intron 25.0%
! ACTCATAAAGAAAAAAAACG+AGG - tig0026723:51773-51792 Msa1430630:intergenic 25.0%
!! AGTTTCTCTAATAGTTTTCT+AGG - tig0026723:51997-52016 Msa1430630:intergenic 25.0%
! AAACTATTAGAGAAACTACT+CGG + tig0026723:52000-52019 Msa1430630:intron 25.0%
! AGATATAGAGATTAATGAGT+TGG + tig0026723:52025-52044 Msa1430630:intron 25.0%
!! AATTTTACTGAAATCTTCAC+AGG + tig0026723:52506-52525 Msa1430630:intron 25.0%
! AAGTGAACATATAAGTAGTA+CGG - tig0026723:52560-52579 Msa1430630:intergenic 25.0%
! TTAGGCATATAAAGCATAAA+TGG - tig0026723:52761-52780 Msa1430630:intergenic 25.0%
! GGGAAAACTTGTATTTAAAT+GGG - tig0026723:53227-53246 Msa1430630:intergenic 25.0%
! AGGGAAAACTTGTATTTAAA+TGG - tig0026723:53228-53247 Msa1430630:intergenic 25.0%
!!! TTTTATACATTTCTAGAGAG+AGG + tig0026723:53281-53300 Msa1430630:intron 25.0%
! TTGTTATCGTTTAAGGAATT+TGG + tig0026723:53749-53768 Msa1430630:intron 25.0%
!! AATGTAAGGTACTAACTTTA+TGG - tig0026723:54350-54369 Msa1430630:intergenic 25.0%
!! AAGTTCTTGTTTCTCTTTAT+TGG + tig0026723:54673-54692 Msa1430630:intron 25.0%
! ATCCAATTGTTTCATTCAAT+AGG + tig0026723:54702-54721 Msa1430630:intron 25.0%
! TTCCTATTGAATGAAACAAT+TGG - tig0026723:54707-54726 Msa1430630:intergenic 25.0%
! TTTAGGAAATTGAAGATGTT+AGG - tig0026723:54871-54890 Msa1430630:intergenic 25.0%
!!! GGTTCACTTGTTTTTAAAAT+CGG + tig0026723:55217-55236 Msa1430630:intron 25.0%
! ACTAATATCAAACTGATGAA+AGG + tig0026723:55318-55337 Msa1430630:intron 25.0%
! AGTTCATTGATAAAATCTTC+GGG - tig0026723:55620-55639 Msa1430630:intergenic 25.0%
! TTTCGCACAATGTTATTAAT+TGG + tig0026723:55734-55753 Msa1430630:intron 25.0%
! TACAAAATACTGTCAAATAG+TGG + tig0026723:55828-55847 Msa1430630:intron 25.0%
! CATAAAGGAAGATTAATGAA+GGG - tig0026723:55990-56009 Msa1430630:intergenic 25.0%
! TCATAAAGGAAGATTAATGA+AGG - tig0026723:55991-56010 Msa1430630:intergenic 25.0%
! CCTAATTAAAGAAGTCATAA+AGG - tig0026723:56005-56024 Msa1430630:intergenic 25.0%
! CCTTTATGACTTCTTTAATT+AGG + tig0026723:56002-56021 Msa1430630:intron 25.0%
!! AAAAAGTAATAGTCTAAAGC+GGG - tig0026723:56289-56308 Msa1430630:intergenic 25.0%
!! TAATAGTCTTTTCATTTGCA+AGG + tig0026723:56712-56731 Msa1430630:intron 25.0%
!! GATGGAAGTGTATTTAAAAA+TGG - tig0026723:56851-56870 Msa1430630:intergenic 25.0%
! CTTGATTACAAGCTATAATT+AGG + tig0026723:56926-56945 Msa1430630:three_prime_UTR 25.0%
!!! AAATGTAATATTATTGGCTC+TGG - tig0026723:57237-57256 Msa1430630:intergenic 25.0%
CACATATTAGTATGTTGAAG+AGG - tig0026723:49779-49798 Msa1430630:intergenic 30.0%
! ACACCTTCAATTTGAAATGT+CGG + tig0026723:50145-50164 Msa1430630:intron 30.0%
ATGAGACAACCTTATATGTA+TGG + tig0026723:50177-50196 Msa1430630:intron 30.0%
!! ATTGTAGAGACAATTTGTTG+AGG - tig0026723:50257-50276 Msa1430630:intergenic 30.0%
GATCTTGCTGATAAAATAGA+AGG + tig0026723:50299-50318 Msa1430630:CDS 30.0%
AAAGCCACTCAAAAACTAAT+TGG - tig0026723:50481-50500 Msa1430630:intergenic 30.0%
ATCATTAGAGAGAACAAGAA+TGG + tig0026723:50513-50532 Msa1430630:intron 30.0%
AGAATGGAACATATCAAGAA+AGG + tig0026723:50529-50548 Msa1430630:CDS 30.0%
TGCATTAGTTCAGTTATTAC+AGG - tig0026723:50629-50648 Msa1430630:intergenic 30.0%
ATCCTTAAGAGGTAAGAAAA+TGG - tig0026723:50722-50741 Msa1430630:intergenic 30.0%
GTCAATGACATTCTTAATCT+CGG + tig0026723:50859-50878 Msa1430630:CDS 30.0%
!! TTCATTTTTGAATGTCTGTC+TGG + tig0026723:51008-51027 Msa1430630:intron 30.0%
!! TCATTTTTGAATGTCTGTCT+GGG + tig0026723:51009-51028 Msa1430630:intron 30.0%
ATCCTCGTATACATTTATGA+AGG - tig0026723:51244-51263 Msa1430630:intergenic 30.0%
!! ATTACTAGTTCTACAGGTTA+AGG - tig0026723:51282-51301 Msa1430630:intergenic 30.0%
!! TCACTTATTACTAGTTCTAC+AGG - tig0026723:51288-51307 Msa1430630:intergenic 30.0%
AAACCTATTCCTATATTGCA+TGG - tig0026723:51738-51757 Msa1430630:intergenic 30.0%
TAGAATATGACACTGAAAGA+GGG - tig0026723:52274-52293 Msa1430630:intergenic 30.0%
ATAGAATATGACACTGAAAG+AGG - tig0026723:52275-52294 Msa1430630:intergenic 30.0%
! ATGATTTTACAGATAAGACG+TGG + tig0026723:52293-52312 Msa1430630:intron 30.0%
! TGATTTTACAGATAAGACGT+GGG + tig0026723:52294-52313 Msa1430630:intron 30.0%
!!! AAAAGCACAATATTTTTGGG+AGG + tig0026723:52430-52449 Msa1430630:CDS 30.0%
! TCCAACAATTCTTCCAATTT+TGG - tig0026723:52606-52625 Msa1430630:intergenic 30.0%
AAGAATTGTTGGAAGAATAC+TGG + tig0026723:52613-52632 Msa1430630:CDS 30.0%
TTGAGCACTTATCAATATTC+TGG - tig0026723:52648-52667 Msa1430630:intergenic 30.0%
! CTTGTTATGCAAGTTATCTA+CGG + tig0026723:52709-52728 Msa1430630:intron 30.0%
TGCATAAATTGGGTAGAATT+AGG - tig0026723:52779-52798 Msa1430630:intergenic 30.0%
TAATTCTACCCAATTTATGC+AGG + tig0026723:52778-52797 Msa1430630:intron 30.0%
! TGTCATTTCCTGCATAAATT+GGG - tig0026723:52789-52808 Msa1430630:intergenic 30.0%
! TTGTCATTTCCTGCATAAAT+TGG - tig0026723:52790-52809 Msa1430630:intergenic 30.0%
AAACACAAAGCAAGTGATTA+AGG + tig0026723:53325-53344 Msa1430630:intron 30.0%
TTGATGTCTCAATGAATCTA+GGG - tig0026723:53362-53381 Msa1430630:intergenic 30.0%
TAAACTAATGCAAGGAATGA+AGG - tig0026723:53412-53431 Msa1430630:intergenic 30.0%
TAGACATGTAAACTAATGCA+AGG - tig0026723:53420-53439 Msa1430630:intergenic 30.0%
TAACCTTCTTTGTAGTATTG+AGG + tig0026723:53448-53467 Msa1430630:intron 30.0%
TTACCTCAATACTACAAAGA+AGG - tig0026723:53454-53473 Msa1430630:intergenic 30.0%
CAAAGAGATTCAAGATGATT+TGG + tig0026723:53567-53586 Msa1430630:intron 30.0%
TAAACGATAACAAAGTCGAT+CGG - tig0026723:53742-53761 Msa1430630:intergenic 30.0%
! ATCGACTTTGTTATCGTTTA+AGG + tig0026723:53742-53761 Msa1430630:intron 30.0%
ACACTAAAGTAAAAACGAGA+GGG - tig0026723:53948-53967 Msa1430630:intergenic 30.0%
TACACAATCGTTCACATTAA+GGG - tig0026723:54014-54033 Msa1430630:intergenic 30.0%
TTACACAATCGTTCACATTA+AGG - tig0026723:54015-54034 Msa1430630:intergenic 30.0%
ATGTACACGTGAGTATATAT+AGG - tig0026723:54075-54094 Msa1430630:intergenic 30.0%
TACATAGTTATATGACGTGT+AGG + tig0026723:54090-54109 Msa1430630:intron 30.0%
!!! GAAATTCTAGTTTGGTTTTG+AGG - tig0026723:54167-54186 Msa1430630:intergenic 30.0%
TCAACATATAAGTAGCGTAA+TGG - tig0026723:54216-54235 Msa1430630:intergenic 30.0%
ATCAATGCAGTATAGAAAAC+TGG - tig0026723:54279-54298 Msa1430630:intergenic 30.0%
! AAGGTACTAACTTTATGGAT+TGG - tig0026723:54345-54364 Msa1430630:intergenic 30.0%
GAGATACTGAGAGTTATTTA+TGG + tig0026723:54521-54540 Msa1430630:exon 30.0%
GAATGAAACAATTGGATCAT+GGG - tig0026723:54699-54718 Msa1430630:intergenic 30.0%
TGAATGAAACAATTGGATCA+TGG - tig0026723:54700-54719 Msa1430630:intergenic 30.0%
CTTTCTATCTATTCTCAGTA+TGG + tig0026723:54783-54802 Msa1430630:intron 30.0%
TCAATGACTTAGTTTCACAA+AGG - tig0026723:55041-55060 Msa1430630:intergenic 30.0%
!!! TGACGCTTTATTTTGTAGTT+TGG + tig0026723:55082-55101 Msa1430630:intron 30.0%
ATTCAATCACCTGTATCATT+TGG + tig0026723:55118-55137 Msa1430630:three_prime_UTR 30.0%
!! TAGACAAAAATGTTGGTGAT+TGG - tig0026723:55528-55547 Msa1430630:intergenic 30.0%
! TTTTGTACTATACTGTATCG+TGG - tig0026723:55815-55834 Msa1430630:intergenic 30.0%
TTGAAGATTGCAGAAAATAG+AGG - tig0026723:55890-55909 Msa1430630:intergenic 30.0%
!! AACTCTATCCAATTTTAACC+TGG + tig0026723:56036-56055 Msa1430630:intron 30.0%
!! ACTCTATCCAATTTTAACCT+GGG + tig0026723:56037-56056 Msa1430630:intron 30.0%
CATTATTCCCAGGTTAAAAT+TGG - tig0026723:56047-56066 Msa1430630:intergenic 30.0%
ATGAATCACCTGTTTGAATA+TGG - tig0026723:56173-56192 Msa1430630:intergenic 30.0%
CACAAGATTCATTTGAACAA+CGG - tig0026723:56465-56484 Msa1430630:intergenic 30.0%
! TTTTATCATAGGAGGTAAGA+GGG - tig0026723:56530-56549 Msa1430630:intergenic 30.0%
! ATTTTATCATAGGAGGTAAG+AGG - tig0026723:56531-56550 Msa1430630:intergenic 30.0%
! TTAGAAGTTGATCTTGTTTC+AGG + tig0026723:56597-56616 Msa1430630:intron 30.0%
! AAAAATGGCCTTGCAATTAA+TGG - tig0026723:56836-56855 Msa1430630:intergenic 30.0%
AACTCACTTAAGAATACTGT+TGG - tig0026723:57104-57123 Msa1430630:intergenic 30.0%
TTATTCCTGAGTTCTACAAT+TGG + tig0026723:57142-57161 Msa1430630:three_prime_UTR 30.0%
TACATCTTCATTGGTGAAAA+GGG - tig0026723:57287-57306 Msa1430630:intergenic 30.0%
!! AATACTGATTCATTTCAGCA+TGG + tig0026723:57343-57362 Msa1430630:three_prime_UTR 30.0%
AGCTGTGATATTCCATTGAT+GGG - tig0026723:49657-49676 Msa1430630:intergenic 35.0%
AAGCTGTGATATTCCATTGA+TGG - tig0026723:49658-49677 Msa1430630:intergenic 35.0%
! CAATGGAATATCACAGCTTT+TGG + tig0026723:49659-49678 Msa1430630:CDS 35.0%
TGAAAAGATTAGACCAGCTA+TGG + tig0026723:49934-49953 Msa1430630:CDS 35.0%
AACAAATGTTTGACCATAGC+TGG - tig0026723:49950-49969 Msa1430630:intergenic 35.0%
AACATTTGTTCACCTCAAGA+AGG + tig0026723:49960-49979 Msa1430630:CDS 35.0%
TTGAATGTAACCATATGTGC+TGG + tig0026723:50107-50126 Msa1430630:intron 35.0%
! TTTCAAATTGAAGGTGTGTC+TGG - tig0026723:50142-50161 Msa1430630:intergenic 35.0%
ACACCGACATTTCAAATTGA+AGG - tig0026723:50151-50170 Msa1430630:intergenic 35.0%
! CAATTTGAAATGTCGGTGTT+AGG + tig0026723:50152-50171 Msa1430630:intron 35.0%
TGTATATATTGCAGTTGTGC+AGG + tig0026723:50229-50248 Msa1430630:intron 35.0%
TTTATCAGCAAGATCAGATG+AGG - tig0026723:50294-50313 Msa1430630:intergenic 35.0%
TCATATGATGTGTTAGTGTG+TGG + tig0026723:50323-50342 Msa1430630:CDS 35.0%
TGGAAAGGAATGTGTTGAAA+GGG + tig0026723:50408-50427 Msa1430630:CDS 35.0%
!!! CGATCCAATTAGTTTTTGAG+TGG + tig0026723:50474-50493 Msa1430630:intron 35.0%
! CATATCAAGAAAGGAGCTTT+TGG + tig0026723:50538-50557 Msa1430630:CDS 35.0%
!!! CTTTTGGAACTTGTAGAAGT+TGG + tig0026723:50554-50573 Msa1430630:CDS 35.0%
ACTTGTAGAAGTTGGAATCT+TGG + tig0026723:50562-50581 Msa1430630:CDS 35.0%
AAGAAAATGGCATGAAGCTA+TGG - tig0026723:50709-50728 Msa1430630:intergenic 35.0%
!!! TGCCATTTTCTTACCTCTTA+AGG + tig0026723:50717-50736 Msa1430630:intron 35.0%
TGAACAATGCAGAATAGATG+TGG + tig0026723:50811-50830 Msa1430630:intron 35.0%
AGATGTGGATTTGAAAGCAA+AGG + tig0026723:50826-50845 Msa1430630:CDS 35.0%
TTGAAAGCAAAGGAGATATC+TGG + tig0026723:50836-50855 Msa1430630:CDS 35.0%
TGAAAGCAAAGGAGATATCT+GGG + tig0026723:50837-50856 Msa1430630:CDS 35.0%
ACAATCTCTATAAGCCTAAC+AGG - tig0026723:51168-51187 Msa1430630:intergenic 35.0%
! AAGAAACGTTTTATCTCCCT+CGG + tig0026723:51189-51208 Msa1430630:CDS 35.0%
CTCCTTCATAAATGTATACG+AGG + tig0026723:51239-51258 Msa1430630:CDS 35.0%
AACGATTGCATAAAGTTGCA+TGG + tig0026723:51391-51410 Msa1430630:intron 35.0%
!! TTTCAGGTTCTGAAACTTTC+CGG + tig0026723:51554-51573 Msa1430630:intron 35.0%
TCGTCTTATAATTGATGCCA+TGG + tig0026723:51595-51614 Msa1430630:CDS 35.0%
CGTCTTATAATTGATGCCAT+GGG + tig0026723:51596-51615 Msa1430630:CDS 35.0%
GTCTTATAATTGATGCCATG+GGG + tig0026723:51597-51616 Msa1430630:CDS 35.0%
TGTTTCATGCCATGCAATAT+AGG + tig0026723:51726-51745 Msa1430630:intron 35.0%
ATGCCATGCAATATAGGAAT+AGG + tig0026723:51732-51751 Msa1430630:intron 35.0%
AGTCAAATCACTAGATGTAG+AGG + tig0026723:51967-51986 Msa1430630:intron 35.0%
CTTTGTCACAAACATCAGAT+AGG + tig0026723:52174-52193 Msa1430630:intron 35.0%
GCTGAATATGACATCACTAT+TGG - tig0026723:52381-52400 Msa1430630:intergenic 35.0%
ATATAAGTAGTACGGTCAAG+AGG - tig0026723:52552-52571 Msa1430630:intergenic 35.0%
GCCAAAATTGGAAGAATTGT+TGG + tig0026723:52602-52621 Msa1430630:CDS 35.0%
AGTGAATAATCCTAGAGAGA+GGG - tig0026723:53247-53266 Msa1430630:intergenic 35.0%
TAGTGAATAATCCTAGAGAG+AGG - tig0026723:53248-53267 Msa1430630:intergenic 35.0%
CTTGATGTCTCAATGAATCT+AGG - tig0026723:53363-53382 Msa1430630:intergenic 35.0%
CTAGATTCATTGAGACATCA+AGG + tig0026723:53361-53380 Msa1430630:intron 35.0%
!! AAAGCGACATCGTTATTTCT+AGG - tig0026723:53796-53815 Msa1430630:intergenic 35.0%
! TAGAAATAACGATGTCGCTT+TGG + tig0026723:53795-53814 Msa1430630:intron 35.0%
CACTAAAGTAAAAACGAGAG+GGG - tig0026723:53947-53966 Msa1430630:intergenic 35.0%
GACACTAAAGTAAAAACGAG+AGG - tig0026723:53949-53968 Msa1430630:intergenic 35.0%
AATCGTTCACATTAAGGGTT+TGG - tig0026723:54009-54028 Msa1430630:intergenic 35.0%
TATATAGGATCGTTTCCACA+GGG - tig0026723:54060-54079 Msa1430630:intergenic 35.0%
ATATATAGGATCGTTTCCAC+AGG - tig0026723:54061-54080 Msa1430630:intergenic 35.0%
! CTGTGGTTGAAATTCTAGTT+TGG - tig0026723:54175-54194 Msa1430630:intergenic 35.0%
! ATAGAAAACTGGTAGCGTAA+TGG - tig0026723:54268-54287 Msa1430630:intergenic 35.0%
GGAGAATTAAAGAACACATC+AGG - tig0026723:54421-54440 Msa1430630:intergenic 35.0%
! GCATGATTTGTGACATTGAA+TGG - tig0026723:54627-54646 Msa1430630:intergenic 35.0%
AAAACTCTACTAAAAGCAGC+TGG - tig0026723:54989-55008 Msa1430630:intergenic 35.0%
! TGCTTTTAGTAGAGTTTTGC+AGG + tig0026723:54991-55010 Msa1430630:three_prime_UTR 35.0%
ACTTAGTTTCACAAAGGTTC+AGG - tig0026723:55035-55054 Msa1430630:intergenic 35.0%
!! CTGTATCATTTGGTGGTTTT+GGG + tig0026723:55128-55147 Msa1430630:three_prime_UTR 35.0%
! GTTTATGGCCGAAAAAGTTT+TGG + tig0026723:55277-55296 Msa1430630:intron 35.0%
!! TAGCAGAAAAGTACCATGTA+TGG - tig0026723:55464-55483 Msa1430630:intergenic 35.0%
GCTGCATTAGACAAAAATGT+TGG - tig0026723:55535-55554 Msa1430630:intergenic 35.0%
! AACCATGAAGCACTCAAATT+GGG - tig0026723:55557-55576 Msa1430630:intergenic 35.0%
GATAAAATCTTCGGGAACAT+CGG - tig0026723:55612-55631 Msa1430630:intergenic 35.0%
TCCTCAATACTATAGCGTAA+TGG + tig0026723:55766-55785 Msa1430630:intron 35.0%
TCCATTACGCTATAGTATTG+AGG - tig0026723:55770-55789 Msa1430630:intergenic 35.0%
! ACTATAGCACTTTTGTGTTG+TGG + tig0026723:55852-55871 Msa1430630:intron 35.0%
TTACAGGATGTTGTACAGTT+TGG + tig0026723:56091-56110 Msa1430630:intron 35.0%
TACAGGATGTTGTACAGTTT+GGG + tig0026723:56092-56111 Msa1430630:intron 35.0%
!! AATATGGATGGGAGTATTTG+AGG - tig0026723:56157-56176 Msa1430630:intergenic 35.0%
TCACCTGTTTGAATATGGAT+GGG - tig0026723:56168-56187 Msa1430630:intergenic 35.0%
ATCACCTGTTTGAATATGGA+TGG - tig0026723:56169-56188 Msa1430630:intergenic 35.0%
ATTGCTTGCTCAACAAGAAA+AGG - tig0026723:56394-56413 Msa1430630:intergenic 35.0%
CGTTGTTCAAATGAATCTTG+TGG + tig0026723:56463-56482 Msa1430630:intron 35.0%
TTTATCATAGGAGGTAAGAG+GGG - tig0026723:56529-56548 Msa1430630:intergenic 35.0%
! AAGTTGATCTTGTTTCAGGT+TGG + tig0026723:56601-56620 Msa1430630:intron 35.0%
AGGAACTATACTTATACACG+TGG + tig0026723:56946-56965 Msa1430630:three_prime_UTR 35.0%
TACACAAGTGACAATGAGTT+TGG - tig0026723:56985-57004 Msa1430630:intergenic 35.0%
ACAATTGGAGCAAGTTAACA+TGG + tig0026723:57157-57176 Msa1430630:three_prime_UTR 35.0%
AAACTCTTGTATCGTTCTCA+CGG - tig0026723:57190-57209 Msa1430630:intergenic 35.0%
GTACATCTTCATTGGTGAAA+AGG - tig0026723:57288-57307 Msa1430630:intergenic 35.0%
! CACCATCTCATTTTATCAAG+AGG + tig0026723:57376-57395 Msa1430630:three_prime_UTR 35.0%
GACCTCTTGATAAAATGAGA+TGG - tig0026723:57381-57400 Msa1430630:intergenic 35.0%
TGGTTAAACGTGTTCACTTG+TGG + tig0026723:49514-49533 Msa1430630:five_prime_UTR 40.0%
TTCTGCTGCATTTCTTCTGT+GGG - tig0026723:49698-49717 Msa1430630:intergenic 40.0%
TTTCTGCTGCATTTCTTCTG+TGG - tig0026723:49699-49718 Msa1430630:intergenic 40.0%
!! AATGCAGCAGAAAAGCATTC+AGG + tig0026723:49706-49725 Msa1430630:CDS 40.0%
GAATGACACAAACCTTCTTG+AGG - tig0026723:49975-49994 Msa1430630:intergenic 40.0%
TCAGATGAGGTAAACAAGCT+TGG - tig0026723:50281-50300 Msa1430630:intergenic 40.0%
TATGATGTGTTAGTGTGTGG+AGG + tig0026723:50326-50345 Msa1430630:CDS 40.0%
GTGGAAAGGAATGTGTTGAA+AGG + tig0026723:50407-50426 Msa1430630:CDS 40.0%
GGAAAGGAATGTGTTGAAAG+GGG + tig0026723:50409-50428 Msa1430630:CDS 40.0%
GCAAGATCTGAATCTTCAAC+GGG - tig0026723:51111-51130 Msa1430630:intergenic 40.0%
GGCAAGATCTGAATCTTCAA+CGG - tig0026723:51112-51131 Msa1430630:intergenic 40.0%
!!! TTTTTTTTCTCTGCCACTGC+AGG + tig0026723:51142-51161 Msa1430630:intron 40.0%
!! TTCAGGTTCTGAAACTTTCC+GGG + tig0026723:51555-51574 Msa1430630:intron 40.0%
! AGATGACAAGATTTTGTCCC+CGG - tig0026723:51576-51595 Msa1430630:intergenic 40.0%
! CTTTTCCCCTGTTGTAAAAC+AGG + tig0026723:51622-51641 Msa1430630:CDS 40.0%
!! TAATAGGAGAGCGTTGTGTT+TGG - tig0026723:51859-51878 Msa1430630:intergenic 40.0%
CTCTCCTATTATCCGGAATT+GGG + tig0026723:51868-51887 Msa1430630:intron 40.0%
ATAGCAAGGCTAACATATGC+AGG + tig0026723:51902-51921 Msa1430630:intron 40.0%
TAGCAAGGCTAACATATGCA+GGG + tig0026723:51903-51922 Msa1430630:intron 40.0%
AGAGAAAACAGTAGATCACG+TGG + tig0026723:51939-51958 Msa1430630:intron 40.0%
AAAACAGTAGATCACGTGGA+GGG + tig0026723:51943-51962 Msa1430630:intron 40.0%
! AAGCCTTATCTCACTAAGTG+GGG - tig0026723:52106-52125 Msa1430630:intergenic 40.0%
! CAAGCCTTATCTCACTAAGT+GGG - tig0026723:52107-52126 Msa1430630:intergenic 40.0%
!! TGTTGTTGAGAGTGCTCATA+TGG + tig0026723:52132-52151 Msa1430630:intron 40.0%
!! GTTGTTGAGAGTGCTCATAT+GGG + tig0026723:52133-52152 Msa1430630:intron 40.0%
ATGGGACATCGCATATGATT+TGG + tig0026723:52151-52170 Msa1430630:intron 40.0%
! TTTTACAGATAAGACGTGGG+AGG + tig0026723:52297-52316 Msa1430630:intron 40.0%
AGCTCAACAGTAAAGAGAGT+TGG + tig0026723:52401-52420 Msa1430630:CDS 40.0%
ACTTATGTAGAACCTCAACC+AGG + tig0026723:52576-52595 Msa1430630:CDS 40.0%
TATGCAGGAAATGACAAGCA+AGG + tig0026723:52793-52812 Msa1430630:intron 40.0%
! GGTTCACACAACTTGAGTTT+TGG - tig0026723:52820-52839 Msa1430630:intergenic 40.0%
ATACAACTTCATCAAGGAGC+AGG + tig0026723:53107-53126 Msa1430630:intron 40.0%
TACAACTTCATCAAGGAGCA+GGG + tig0026723:53108-53127 Msa1430630:intron 40.0%
! TACAAGTTTTCCCTCTCTCT+AGG + tig0026723:53234-53253 Msa1430630:intron 40.0%
CATTGAGACATCAAGGATCT+TGG + tig0026723:53368-53387 Msa1430630:intron 40.0%
TGATTAAACGTAACTCCCTG+TGG + tig0026723:54042-54061 Msa1430630:intron 40.0%
! CTATGCCAAACATCTAGAGT+TGG + tig0026723:54395-54414 Msa1430630:intron 40.0%
TAGTACCTCTCACGATATGT+GGG - tig0026723:54554-54573 Msa1430630:intergenic 40.0%
TTAGTACCTCTCACGATATG+TGG - tig0026723:54555-54574 Msa1430630:intergenic 40.0%
! TACGGCACTGTTTGTTGATA+TGG + tig0026723:54944-54963 Msa1430630:intron 40.0%
CAATCACCTGTATCATTTGG+TGG + tig0026723:55121-55140 Msa1430630:three_prime_UTR 40.0%
CCAAAACCACCAAATGATAC+AGG - tig0026723:55130-55149 Msa1430630:intergenic 40.0%
!! CCTGTATCATTTGGTGGTTT+TGG + tig0026723:55127-55146 Msa1430630:three_prime_UTR 40.0%
TGTATGGATTCAGAAGAGAC+AGG - tig0026723:55448-55467 Msa1430630:intergenic 40.0%
GTCTCTTCTGAATCCATACA+TGG + tig0026723:55448-55467 Msa1430630:three_prime_UTR 40.0%
! CAACCATGAAGCACTCAAAT+TGG - tig0026723:55558-55577 Msa1430630:intergenic 40.0%
! GTTTTGCTGACATTGCTCTT+TGG - tig0026723:55583-55602 Msa1430630:intergenic 40.0%
TGCCAACTTTAGTTGTATGC+AGG + tig0026723:55646-55665 Msa1430630:three_prime_UTR 40.0%
CACCTGCATACAACTAAAGT+TGG - tig0026723:55651-55670 Msa1430630:intergenic 40.0%
CAACTTTAGTTGTATGCAGG+TGG + tig0026723:55649-55668 Msa1430630:intron 40.0%
! CACTGATTGTACATTTGCAG+AGG + tig0026723:55917-55936 Msa1430630:intron 40.0%
ATTGTACATTTGCAGAGGCT+TGG + tig0026723:55922-55941 Msa1430630:intron 40.0%
AAGATATCCACCTGCAGAAA+TGG - tig0026723:55964-55983 Msa1430630:intergenic 40.0%
TTAGGACTGTCATTATTCCC+AGG - tig0026723:56057-56076 Msa1430630:intergenic 40.0%
ACAGGATGTTGTACAGTTTG+GGG + tig0026723:56093-56112 Msa1430630:intron 40.0%
TAGGCCTGGTTATGTTAACA+CGG + tig0026723:56131-56150 Msa1430630:three_prime_UTR 40.0%
ACTCCCATCCATATTCAAAC+AGG + tig0026723:56162-56181 Msa1430630:three_prime_UTR 40.0%
GGGAAGATGGTGAATACATT+TGG - tig0026723:56269-56288 Msa1430630:intergenic 40.0%
! AATAGTCTAAAGCGGGAAGA+TGG - tig0026723:56282-56301 Msa1430630:intergenic 40.0%
ATCAGTCAACCATGACCTTA+AGG + tig0026723:56368-56387 Msa1430630:intron 40.0%
AAGAAAAGGCCTTAAGGTCA+TGG - tig0026723:56380-56399 Msa1430630:intergenic 40.0%
CTCAACAAGAAAAGGCCTTA+AGG - tig0026723:56386-56405 Msa1430630:intergenic 40.0%
GTATTCCCGTACTACTTGAT+TGG + tig0026723:56623-56642 Msa1430630:three_prime_UTR 40.0%
TCTGGACCAATCAAGTAGTA+CGG - tig0026723:56632-56651 Msa1430630:intergenic 40.0%
! TCCAGACATTTTCTGATGCT+TGG + tig0026723:56646-56665 Msa1430630:three_prime_UTR 40.0%
AAAGACTATTACCTCACAGC+AGG - tig0026723:56703-56722 Msa1430630:intergenic 40.0%
CACACGTTCCATTAATTGCA+AGG + tig0026723:56825-56844 Msa1430630:intron 40.0%
CATCTTGAGGCATGGAAATA+TGG + tig0026723:56896-56915 Msa1430630:three_prime_UTR 40.0%
ACTTGTGTACCAACATGTGT+TGG + tig0026723:56996-57015 Msa1430630:three_prime_UTR 40.0%
TCATCGAAACCAACACATGT+TGG - tig0026723:57008-57027 Msa1430630:intergenic 40.0%
TTGCTCCAATTGTAGAACTC+AGG - tig0026723:57150-57169 Msa1430630:intergenic 40.0%
ATCTTCATTGGTGAAAAGGG+AGG - tig0026723:57284-57303 Msa1430630:intergenic 40.0%
GTCTGCTTGTACATCTTCAT+TGG - tig0026723:57296-57315 Msa1430630:intergenic 40.0%
CTTCAGCTTCAACCCATCAA+TGG + tig0026723:49642-49661 Msa1430630:CDS 45.0%
!!! CTTAGTACCTGGGTTTTGGA+GGG - tig0026723:49750-49769 Msa1430630:intergenic 45.0%
! GTAGCTTAGTACCTGGGTTT+TGG - tig0026723:49754-49773 Msa1430630:intergenic 45.0%
GAGGTAGTAGCTTAGTACCT+GGG - tig0026723:49760-49779 Msa1430630:intergenic 45.0%
AGAGGTAGTAGCTTAGTACC+TGG - tig0026723:49761-49780 Msa1430630:intergenic 45.0%
!! ATGGAGAGTGTTTCTGTGAG+TGG + tig0026723:49870-49889 Msa1430630:CDS 45.0%
GTTTCTGTGAGTGGTGAAGT+TGG + tig0026723:49879-49898 Msa1430630:CDS 45.0%
! GTAACCATATGTGCTGGCAT+CGG + tig0026723:50113-50132 Msa1430630:intron 45.0%
TTAGTGTGTGGAGGAACTCT+TGG + tig0026723:50335-50354 Msa1430630:CDS 45.0%
TTCGAGTGGCAATTGTGGAA+AGG + tig0026723:50393-50412 Msa1430630:CDS 45.0%
! AAACGTTTTATCTCCCTCGG+TGG + tig0026723:51192-51211 Msa1430630:CDS 45.0%
CTCAAAAAAGACTCCACCGA+GGG - tig0026723:51208-51227 Msa1430630:intergenic 45.0%
!!! CTCGGTGGAGTCTTTTTTGA+GGG + tig0026723:51207-51226 Msa1430630:CDS 45.0%
!! TCAGGTTCTGAAACTTTCCG+GGG + tig0026723:51556-51575 Msa1430630:intron 45.0%
! CCTGACCTGTTTTACAACAG+GGG - tig0026723:51630-51649 Msa1430630:intergenic 45.0%
! CCCTGACCTGTTTTACAACA+GGG - tig0026723:51631-51650 Msa1430630:intergenic 45.0%
CCCTGTTGTAAAACAGGTCA+GGG + tig0026723:51628-51647 Msa1430630:intron 45.0%
! TCCCTGACCTGTTTTACAAC+AGG - tig0026723:51632-51651 Msa1430630:intergenic 45.0%
CACAACGCTCTCCTATTATC+CGG + tig0026723:51861-51880 Msa1430630:intron 45.0%
GCTCTCCTATTATCCGGAAT+TGG + tig0026723:51867-51886 Msa1430630:intron 45.0%
CTGTCCCAATTCCGGATAAT+AGG - tig0026723:51875-51894 Msa1430630:intergenic 45.0%
TGCATAGTCTGTCCCAATTC+CGG - tig0026723:51883-51902 Msa1430630:intergenic 45.0%
AGGCTAACATATGCAGGGTT+TGG + tig0026723:51908-51927 Msa1430630:intron 45.0%
GGCTAACATATGCAGGGTTT+GGG + tig0026723:51909-51928 Msa1430630:intron 45.0%
GAAAACAGTAGATCACGTGG+AGG + tig0026723:51942-51961 Msa1430630:intron 45.0%
CTTATCTCACTAAGTGGGGT+TGG - tig0026723:52102-52121 Msa1430630:intergenic 45.0%
CAACCCCACTTAGTGAGATA+AGG + tig0026723:52100-52119 Msa1430630:intron 45.0%
! CCAAGCCTTATCTCACTAAG+TGG - tig0026723:52108-52127 Msa1430630:intergenic 45.0%
CCACTTAGTGAGATAAGGCT+TGG + tig0026723:52105-52124 Msa1430630:intron 45.0%
CACTGAAAGAGGGTTGAGAA+AGG - tig0026723:52264-52283 Msa1430630:intergenic 45.0%
ACAACAAGGCAAACACCATC+AGG - tig0026723:52326-52345 Msa1430630:intergenic 45.0%
! GATGGTGTTTGCCTTGTTGT+TGG + tig0026723:52326-52345 Msa1430630:CDS 45.0%
!! AATTTTGGCGATCCTGGTTG+AGG - tig0026723:52591-52610 Msa1430630:intergenic 45.0%
TCAACCAGGATCGCCAAAAT+TGG + tig0026723:52590-52609 Msa1430630:CDS 45.0%
!! TCTTCCAATTTTGGCGATCC+TGG - tig0026723:52597-52616 Msa1430630:intergenic 45.0%
CTAAAATTCACAAGCGACCC+TGG - tig0026723:52926-52945 Msa1430630:intergenic 45.0%
CGCGAGATACAACTTCATCA+AGG + tig0026723:53101-53120 Msa1430630:intron 45.0%
AGACATCAAGGATCTTGGCA+TGG + tig0026723:53373-53392 Msa1430630:intron 45.0%
ATGCTTTCGGATGCTTAACC+AGG + tig0026723:53693-53712 Msa1430630:intron 45.0%
GGATCGAACTATTTCGCTTG+CGG - tig0026723:53926-53945 Msa1430630:intergenic 45.0%
AGATGCAACATCAACAGCTG+TGG - tig0026723:54192-54211 Msa1430630:intergenic 45.0%
TCAGGCCAACTCTAGATGTT+TGG - tig0026723:54403-54422 Msa1430630:intergenic 45.0%
TCTTTCCCACATATCGTGAG+AGG + tig0026723:54546-54565 Msa1430630:three_prime_UTR 45.0%
TACTAAAAGCAGCTGGTAGC+GGG - tig0026723:54982-55001 Msa1430630:intergenic 45.0%
CTACTAAAAGCAGCTGGTAG+CGG - tig0026723:54983-55002 Msa1430630:intergenic 45.0%
!! TTGTAGTTTGGTGATGCCAG+CGG + tig0026723:55094-55113 Msa1430630:intron 45.0%
TACAGGTGATTGAATACCGC+TGG - tig0026723:55113-55132 Msa1430630:intergenic 45.0%
CCAGCAACAATGCAACAGAA+AGG - tig0026723:55193-55212 Msa1430630:intergenic 45.0%
CCTTTCTGTTGCATTGTTGC+TGG + tig0026723:55190-55209 Msa1430630:intron 45.0%
TGTTGCATTGTTGCTGGACA+TGG + tig0026723:55196-55215 Msa1430630:intron 45.0%
GGAATACACGAAGCAATCGA+TGG + tig0026723:55401-55420 Msa1430630:intron 45.0%
AGCCCAATTTGAGTGCTTCA+TGG + tig0026723:55552-55571 Msa1430630:intron 45.0%
CTGGACCAATCAAGTAGTAC+GGG - tig0026723:56631-56650 Msa1430630:intergenic 45.0%
GCCAAGCATCAGAAAATGTC+TGG - tig0026723:56650-56669 Msa1430630:intergenic 45.0%
! CCTCAAGATGTCTTTTCCAC+TGG - tig0026723:56886-56905 Msa1430630:intergenic 45.0%
CCAGTGGAAAAGACATCTTG+AGG + tig0026723:56883-56902 Msa1430630:three_prime_UTR 45.0%
GGAAAAGACATCTTGAGGCA+TGG + tig0026723:56888-56907 Msa1430630:three_prime_UTR 45.0%
!!! GTTTTGGAGGGAACAGCTTG+TGG - tig0026723:49738-49757 Msa1430630:intergenic 50.0%
!! GCTTAGTACCTGGGTTTTGG+AGG - tig0026723:49751-49770 Msa1430630:intergenic 50.0%
TCTGTGAGTGGTGAAGTTGG+TGG + tig0026723:49882-49901 Msa1430630:CDS 50.0%
GTGAGTATCAGTGTGGTGTC+CGG - tig0026723:50050-50069 Msa1430630:intergenic 50.0%
TCGACGTGTGAGTATCAGTG+TGG - tig0026723:50057-50076 Msa1430630:intergenic 50.0%
TGTCTGTCTGGGCTTACTCT+CGG + tig0026723:51020-51039 Msa1430630:intron 50.0%
CCTCAAAAAAGACTCCACCG+AGG - tig0026723:51209-51228 Msa1430630:intergenic 50.0%
!!! CCTCGGTGGAGTCTTTTTTG+AGG + tig0026723:51206-51225 Msa1430630:CDS 50.0%
AACAGGGGAAAAGTTCCCCA+TGG - tig0026723:51615-51634 Msa1430630:intergenic 50.0%
CCCCTGTTGTAAAACAGGTC+AGG + tig0026723:51627-51646 Msa1430630:intron 50.0%
GGGACAGACTATGCATAGCA+AGG + tig0026723:51888-51907 Msa1430630:intron 50.0%
!! ACTAAGTGGGGTTGGCTACA+TGG - tig0026723:52094-52113 Msa1430630:intergenic 50.0%
TCTTCACAGGCATTTCCAGC+AGG + tig0026723:52519-52538 Msa1430630:intron 50.0%
GCTTAAGCGAGATTCCTCCA+GGG + tig0026723:52870-52889 Msa1430630:intron 50.0%
GCTTACGCGAGATTTCTCCA+GGG + tig0026723:52971-52990 Msa1430630:intron 50.0%
AGAATCCTGCTTGAGCGACA+TGG - tig0026723:53029-53048 Msa1430630:intergenic 50.0%
GTCGCTCAAGCAGGATTCTA+AGG + tig0026723:53030-53049 Msa1430630:intron 50.0%
! GCTCAAGCAGGATTCTAAGG+CGG + tig0026723:53033-53052 Msa1430630:intron 50.0%
TGTATCTCGCGTAAGCGAGT+GGG - tig0026723:53092-53111 Msa1430630:intergenic 50.0%
TTGTATCTCGCGTAAGCGAG+TGG - tig0026723:53093-53112 Msa1430630:intergenic 50.0%
GCTACGTGGCAAGACTTCAT+TGG + tig0026723:53130-53149 Msa1430630:intron 50.0%
TTTCGGATGCTTAACCAGGC+TGG + tig0026723:53697-53716 Msa1430630:intron 50.0%
ATGCTTAACCAGGCTGGACA+CGG + tig0026723:53703-53722 Msa1430630:intron 50.0%
AGAGCAGCAGAACTGAACAC+GGG - tig0026723:54442-54461 Msa1430630:intergenic 50.0%
GAGAGCAGCAGAACTGAACA+CGG - tig0026723:54443-54462 Msa1430630:intergenic 50.0%
TTCTGCTGCTCTCTGCTTGA+TGG + tig0026723:54450-54469 Msa1430630:intron 50.0%
TGCAGAAATGGTCGTAGCAC+TGG - tig0026723:55952-55971 Msa1430630:intergenic 50.0%
AGTGCTACGACCATTTCTGC+AGG + tig0026723:55951-55970 Msa1430630:three_prime_UTR 50.0%
ACTTTCGAAGACACTAGGCC+TGG + tig0026723:56117-56136 Msa1430630:three_prime_UTR 50.0%
GAGGCCGTGTTAACATAACC+AGG - tig0026723:56138-56157 Msa1430630:intergenic 50.0%
GTAAGAGGGGCAAGAATCGA+TGG - tig0026723:56516-56535 Msa1430630:intergenic 50.0%
ATCAGCAAAGGTCGCGAGAA+AGG - tig0026723:56680-56699 Msa1430630:intergenic 50.0%
CACTGGAAACTCGTCTTCGA+TGG - tig0026723:56869-56888 Msa1430630:intergenic 50.0%
CATCGAAGACGAGTTTCCAG+TGG + tig0026723:56867-56886 Msa1430630:three_prime_UTR 50.0%
GAGGCATGGAAATATGGAGC+TGG + tig0026723:56902-56921 Msa1430630:three_prime_UTR 50.0%
AGCTGTTCCCTCCAAAACCC+AGG + tig0026723:49740-49759 Msa1430630:CDS 55.0%
!! AGTGGTGAAGTTGGTGGAGC+TGG + tig0026723:49888-49907 Msa1430630:CDS 55.0%
TCTGACACAGACACCGACAC+CGG + tig0026723:50028-50047 Msa1430630:intron 55.0%
ATCAGTGTGGTGTCCGGTGT+CGG - tig0026723:50044-50063 Msa1430630:intergenic 55.0%
GTGTCCGATGCCAGCACATA+TGG - tig0026723:50120-50139 Msa1430630:intergenic 55.0%
GGGTCTTCGAGTGGCAATTG+TGG + tig0026723:50388-50407 Msa1430630:CDS 55.0%
TAAGCCTAACAGGCCTGCAG+TGG - tig0026723:51158-51177 Msa1430630:intergenic 55.0%
! ATTTTCAAAGCCACGCGCGC+AGG - tig0026723:52354-52373 Msa1430630:intergenic 55.0%
CAGGCATTTCCAGCAGGATC+AGG + tig0026723:52525-52544 Msa1430630:intron 55.0%
TCAAGAGGACCTGATCCTGC+TGG - tig0026723:52537-52556 Msa1430630:intergenic 55.0%
TCGCGTAAGCGAGATCTGCT+TGG - tig0026723:52841-52860 Msa1430630:intergenic 55.0%
AAGCAGATCTCGCTTACGCG+AGG + tig0026723:52840-52859 Msa1430630:intron 55.0%
CGCTTAAGCGAGATTCCTCC+AGG + tig0026723:52869-52888 Msa1430630:intron 55.0%
AAGGTTGAGCTTCTCCCTGG+AGG - tig0026723:52887-52906 Msa1430630:intergenic 55.0%
TGGAAGCGAGATGCAAGCGA+AGG - tig0026723:52906-52925 Msa1430630:intergenic 55.0%
TTCGCTTGCATCTCGCTTCC+AGG + tig0026723:52905-52924 Msa1430630:intron 55.0%
TCGCTTGCATCTCGCTTCCA+GGG + tig0026723:52906-52925 Msa1430630:intron 55.0%
CGCTTACGCGAGATTTCTCC+AGG + tig0026723:52970-52989 Msa1430630:intron 55.0%
CGAGATGCTCATCTGTTCCC+TGG - tig0026723:52991-53010 Msa1430630:intergenic 55.0%
CAAGCAACTTCGCTTACGCG+AGG + tig0026723:53065-53084 Msa1430630:intron 55.0%
TTAATCGACCGTGTCCAGCC+TGG - tig0026723:53714-53733 Msa1430630:intergenic 55.0%
!! CGATGTCGCTTTGGACACGA+AGG + tig0026723:53804-53823 Msa1430630:intron 55.0%
!!! GTGGTTTTGGGAGCTTGACC+AGG + tig0026723:55140-55159 Msa1430630:three_prime_UTR 55.0%
GGAGCTTGACCAGGCATCTT+GGG + tig0026723:55149-55168 Msa1430630:three_prime_UTR 55.0%
TGACAGTCTCCCAAGATGCC+TGG - tig0026723:55161-55180 Msa1430630:intergenic 55.0%
CATCTTGGGAGACTGTCAGC+TGG + tig0026723:55163-55182 Msa1430630:three_prime_UTR 55.0%
GCTACGACCATTTCTGCAGG+TGG + tig0026723:55954-55973 Msa1430630:intron 55.0%
! GGGGCACTTTCGAAGACACT+AGG + tig0026723:56112-56131 Msa1430630:three_prime_UTR 55.0%
CCTCACAGCAGGATCAGCAA+AGG - tig0026723:56692-56711 Msa1430630:intergenic 55.0%
CCTTTGCTGATCCTGCTGTG+AGG + tig0026723:56689-56708 Msa1430630:three_prime_UTR 55.0%
!! GGTGAAGTTGGTGGAGCTGG+AGG + tig0026723:49891-49910 Msa1430630:CDS 60.0%
AAGACCCCTTGCGCACAAGG+CGG - tig0026723:50375-50394 Msa1430630:intergenic 60.0%
TCGAAGACCCCTTGCGCACA+AGG - tig0026723:50378-50397 Msa1430630:intergenic 60.0%
TCTGCCACTGCAGGCCTGTT+AGG + tig0026723:51151-51170 Msa1430630:intron 60.0%
AGACGTGGGAGGAAGCCTGA+TGG + tig0026723:52308-52327 Msa1430630:CDS 60.0%
GCGCGCAGGTTCCAACAACA+AGG - tig0026723:52340-52359 Msa1430630:intergenic 60.0%
GCGAAGGTTGAGCTTCTCCC+TGG - tig0026723:52890-52909 Msa1430630:intergenic 60.0%
CGCTTCCATGTCGCTCAAGC+AGG + tig0026723:53021-53040 Msa1430630:intron 60.0%
CATCAAGGAGCAGGGCTACG+TGG + tig0026723:53116-53135 Msa1430630:intron 60.0%
GGGAGCTTGACCAGGCATCT+TGG + tig0026723:55148-55167 Msa1430630:three_prime_UTR 60.0%
TTGCCACCGCCTTGTGCGCA+AGG + tig0026723:50366-50385 Msa1430630:CDS 65.0%
TGCCACCGCCTTGTGCGCAA+GGG + tig0026723:50367-50386 Msa1430630:CDS 65.0%
GTGCGCAAGGGGTCTTCGAG+TGG + tig0026723:50379-50398 Msa1430630:CDS 65.0%
GTTGTTGGAACCTGCGCGCG+TGG + tig0026723:52341-52360 Msa1430630:CDS 65.0%
GCCACCGCCTTGTGCGCAAG+GGG + tig0026723:50368-50387 Msa1430630:CDS 70.0%
ACCCCTTGCGCACAAGGCGG+TGG - tig0026723:50372-50391 Msa1430630:intergenic 70.0%
!! GCAGCTGGTAGCGGGCTGTG+AGG - tig0026723:54974-54993 Msa1430630:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0026723 gene 49507 57406 49507 ID=Msa1430630;Name=Msa1430630
tig0026723 mRNA 49507 57406 49507 ID=Msa1430630-mRNA-1;Parent=Msa1430630;Name=Msa1430630-mRNA-1;_AED=0.21;_eAED=0.21;_QI=126|1|1|1|0.94|0.94|18|1122|364
tig0026723 exon 49507 49761 49507 ID=Msa1430630-mRNA-1:exon:7101;Parent=Msa1430630-mRNA-1
tig0026723 exon 49864 49981 49864 ID=Msa1430630-mRNA-1:exon:7102;Parent=Msa1430630-mRNA-1
tig0026723 exon 50243 50430 50243 ID=Msa1430630-mRNA-1:exon:7103;Parent=Msa1430630-mRNA-1
tig0026723 exon 50521 50628 50521 ID=Msa1430630-mRNA-1:exon:7104;Parent=Msa1430630-mRNA-1
tig0026723 exon 50823 50887 50823 ID=Msa1430630-mRNA-1:exon:7105;Parent=Msa1430630-mRNA-1
tig0026723 exon 51164 51269 51164 ID=Msa1430630-mRNA-1:exon:7106;Parent=Msa1430630-mRNA-1
tig0026723 exon 51560 51643 51560 ID=Msa1430630-mRNA-1:exon:7107;Parent=Msa1430630-mRNA-1
tig0026723 exon 52305 52451 52305 ID=Msa1430630-mRNA-1:exon:7108;Parent=Msa1430630-mRNA-1
tig0026723 exon 52528 52655 52528 ID=Msa1430630-mRNA-1:exon:7109;Parent=Msa1430630-mRNA-1
tig0026723 exon 54500 54567 54500 ID=Msa1430630-mRNA-1:exon:7110;Parent=Msa1430630-mRNA-1
tig0026723 exon 54979 55012 54979 ID=Msa1430630-mRNA-1:exon:7111;Parent=Msa1430630-mRNA-1
tig0026723 exon 55100 55184 55100 ID=Msa1430630-mRNA-1:exon:7112;Parent=Msa1430630-mRNA-1
tig0026723 exon 55402 55469 55402 ID=Msa1430630-mRNA-1:exon:7113;Parent=Msa1430630-mRNA-1
tig0026723 exon 55554 55667 55554 ID=Msa1430630-mRNA-1:exon:7114;Parent=Msa1430630-mRNA-1
tig0026723 exon 55937 55972 55937 ID=Msa1430630-mRNA-1:exon:7115;Parent=Msa1430630-mRNA-1
tig0026723 exon 56097 56183 56097 ID=Msa1430630-mRNA-1:exon:7116;Parent=Msa1430630-mRNA-1
tig0026723 exon 56619 56710 56619 ID=Msa1430630-mRNA-1:exon:7117;Parent=Msa1430630-mRNA-1
tig0026723 exon 56847 57406 56847 ID=Msa1430630-mRNA-1:exon:7118;Parent=Msa1430630-mRNA-1
tig0026723 five_prime_UTR 49507 49632 49507 ID=Msa1430630-mRNA-1:five_prime_utr;Parent=Msa1430630-mRNA-1
tig0026723 CDS 49633 49761 49633 ID=Msa1430630-mRNA-1:cds;Parent=Msa1430630-mRNA-1
tig0026723 CDS 49864 49981 49864 ID=Msa1430630-mRNA-1:cds;Parent=Msa1430630-mRNA-1
tig0026723 CDS 50243 50430 50243 ID=Msa1430630-mRNA-1:cds;Parent=Msa1430630-mRNA-1
tig0026723 CDS 50521 50628 50521 ID=Msa1430630-mRNA-1:cds;Parent=Msa1430630-mRNA-1
tig0026723 CDS 50823 50887 50823 ID=Msa1430630-mRNA-1:cds;Parent=Msa1430630-mRNA-1
tig0026723 CDS 51164 51269 51164 ID=Msa1430630-mRNA-1:cds;Parent=Msa1430630-mRNA-1
tig0026723 CDS 51560 51643 51560 ID=Msa1430630-mRNA-1:cds;Parent=Msa1430630-mRNA-1
tig0026723 CDS 52305 52451 52305 ID=Msa1430630-mRNA-1:cds;Parent=Msa1430630-mRNA-1
tig0026723 CDS 52528 52655 52528 ID=Msa1430630-mRNA-1:cds;Parent=Msa1430630-mRNA-1
tig0026723 CDS 54500 54521 54500 ID=Msa1430630-mRNA-1:cds;Parent=Msa1430630-mRNA-1
tig0026723 three_prime_UTR 54522 54567 54522 ID=Msa1430630-mRNA-1:three_prime_utr;Parent=Msa1430630-mRNA-1
tig0026723 three_prime_UTR 54979 55012 54979 ID=Msa1430630-mRNA-1:three_prime_utr;Parent=Msa1430630-mRNA-1
tig0026723 three_prime_UTR 55100 55184 55100 ID=Msa1430630-mRNA-1:three_prime_utr;Parent=Msa1430630-mRNA-1
tig0026723 three_prime_UTR 55402 55469 55402 ID=Msa1430630-mRNA-1:three_prime_utr;Parent=Msa1430630-mRNA-1
tig0026723 three_prime_UTR 55554 55667 55554 ID=Msa1430630-mRNA-1:three_prime_utr;Parent=Msa1430630-mRNA-1
tig0026723 three_prime_UTR 55937 55972 55937 ID=Msa1430630-mRNA-1:three_prime_utr;Parent=Msa1430630-mRNA-1
tig0026723 three_prime_UTR 56097 56183 56097 ID=Msa1430630-mRNA-1:three_prime_utr;Parent=Msa1430630-mRNA-1
tig0026723 three_prime_UTR 56619 56710 56619 ID=Msa1430630-mRNA-1:three_prime_utr;Parent=Msa1430630-mRNA-1
tig0026723 three_prime_UTR 56847 57406 56847 ID=Msa1430630-mRNA-1:three_prime_utr;Parent=Msa1430630-mRNA-1
Gene Sequence

>Msa1430630

ATGTCGTTACTTCAGCTTCAACCCATCAATGGAATATCACAGCTTTTGGTGAAGTCTCAATTCCCACAGAAGAAATGCAGCAGAAAAGCATTCAGGTTCATACCACAAGCTGTTCCCTCCAAAACCCAGAGGATAATGGAGAGTGTTTCTGTGAGTGGTGAAGTTGGTGGAGCTGGAGGAGCATACTCATATGAAGCTTTGAAAAGATTAGACCAGCTATGGTCAAACATTTGTTCACCTCAAGAAGTTGTGCAGGAACCTCAACAAATTGTCTCTACAATACCAAGCTTGTTTACCTCATCTGATCTTGCTGATAAAATAGAAGGTTCATATGATGTGTTAGTGTGTGGAGGAACTCTTGGAATTTTCATTGCCACCGCCTTGTGCGCAAGGGGTCTTCGAGTGGCAATTGTGGAAAGGAATGTGTTGAAAGGGAGAGAACAAGAATGGAACATATCAAGAAAGGAGCTTTTGGAACTTGTAGAAGTTGGAATCTTGGAAGAAGATGACATTGAAAGAGTCACAGCAGCAAAATTTAATCCTAATAGATGTGGATTTGAAAGCAAAGGAGATATCTGGGTCAATGACATTCTTAATCTCGGTGTTTCGCCTGTTAGGCTTATAGAGATTGTAAAGAAACGTTTTATCTCCCTCGGTGGAGTCTTTTTTGAGGGTTACAGTGTCTCCTTCATAAATGTATACGAGGATGCTGCTGTTCTGAAACTTTCCGGGGACAAAATCTTGTCATCTCGTCTTATAATTGATGCCATGGGGAACTTTTCCCCTGTTGTAAAACAGATAAGACGTGGGAGGAAGCCTGATGGTGTTTGCCTTGTTGTTGGAACCTGCGCGCGTGGCTTTGAAAATAACTCCAATAGTGATGTCATATTCAGCAGCTCAACAGTAAAGAGAGTTGGAGATTCAAAAGCACAATATTTTTGGGAGGCATTTCCAGCAGGATCAGGTCCTCTTGACCGTACTACTTATATGTTCACTTATGTAGAACCTCAACCAGGATCGCCAAAATTGGAAGAATTGTTGGAAGAATACTGGAATCTGATGCCAGAATATTGGGTGTTCCACTTGACAATCTAG

Protein sequence

>Msa1430630

MSLLQLQPINGISQLLVKSQFPQKKCSRKAFRFIPQAVPSKTQRIMESVSVSGEVGGAGGAYSYEALKRLDQLWSNICSPQEVVQEPQQIVSTIPSLFTSSDLADKIEGSYDVLVCGGTLGIFIATALCARGLRVAIVERNVLKGREQEWNISRKELLELVEVGILEEDDIERVTAAKFNPNRCGFESKGDIWVNDILNLGVSPVRLIEIVKKRFISLGGVFFEGYSVSFINVYEDAAVLKLSGDKILSSRLIIDAMGNFSPVVKQIRRGRKPDGVCLVVGTCARGFENNSNSDVIFSSSTVKRVGDSKAQYFWEAFPAGSGPLDRTTYMFTYVEPQPGSPKLEELLEEYWNLMPEYWVFHLTI*