AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1271200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271200 MtrunA17_Chr8g0335141 95.754 471 20 0 1 471 1 471 0.0 924
Msa1271200 MtrunA17_Chr8g0335161 85.928 469 65 1 4 471 1 469 0.0 829
Msa1271200 MtrunA17_Chr6g0459311 72.766 470 123 3 4 471 8 474 0.0 704
Msa1271200 MtrunA17_Chr6g0486251 71.336 464 128 3 4 465 1 461 0.0 682
Msa1271200 MtrunA17_Chr6g0486201 71.336 464 128 3 4 465 1 461 0.0 682
Msa1271200 MtrunA17_Chr8g0361371 58.351 473 179 9 3 464 1 466 0.0 536
Msa1271200 MtrunA17_Chr8g0334831 55.809 482 186 10 4 465 1 475 1.53e-178 509
Msa1271200 MtrunA17_Chr7g0232411 46.414 474 242 7 4 471 1 468 3.46e-140 410
Msa1271200 MtrunA17_Chr7g0232391 46.835 474 240 7 4 471 1 468 5.76e-140 410
Msa1271200 MtrunA17_Chr7g0232341 45.781 474 244 8 4 470 1 468 2.24e-138 406
Msa1271200 MtrunA17_Chr7g0232311 48.188 469 229 9 4 466 1 461 4.74e-138 405
Msa1271200 MtrunA17_Chr8g0347281 45.671 462 238 9 8 465 17 469 1.98e-134 396
Msa1271200 MtrunA17_Chr7g0232401 45.895 475 239 10 4 468 1 467 4.33e-134 395
Msa1271200 MtrunA17_Chr7g0232331 44.609 473 249 8 4 469 1 467 2.19e-133 393
Msa1271200 MtrunA17_Chr7g0275511 44.681 470 247 9 8 470 14 477 4.91e-133 393
Msa1271200 MtrunA17_Chr8g0336741 45.182 467 245 7 10 471 14 474 8.01e-132 389
Msa1271200 MtrunA17_Chr8g0373301 44.259 479 245 11 3 470 1 468 7.10e-131 387
Msa1271200 MtrunA17_Chr8g0347271 43.939 462 246 9 8 465 18 470 8.79e-131 387
Msa1271200 MtrunA17_Chr8g0336731 45.376 465 243 7 12 471 35 493 1.40e-128 382
Msa1271200 MtrunA17_Chr8g0339451 43.949 471 248 7 12 471 1 466 6.62e-126 374
Msa1271200 MtrunA17_Chr1g0153451 43.340 473 256 8 4 471 1 466 7.95e-126 374
Msa1271200 MtrunA17_Chr6g0449931 44.864 477 247 10 4 471 1 470 2.62e-124 370
Msa1271200 MtrunA17_Chr8g0336651 46.089 473 244 7 4 471 1 467 3.59e-124 390
Msa1271200 MtrunA17_Chr8g0336651 44.374 471 247 9 10 471 782 1246 2.28e-123 388
Msa1271200 MtrunA17_Chr8g0336651 45.552 281 119 4 194 471 528 777 1.38e-68 237
Msa1271200 MtrunA17_Chr8g0336691 44.864 477 250 8 2 471 6 476 1.63e-122 388
Msa1271200 MtrunA17_Chr8g0336691 43.644 472 247 8 10 471 920 1382 9.53e-118 375
Msa1271200 MtrunA17_Chr8g0336691 41.113 467 238 8 10 471 481 915 1.39e-108 350
Msa1271200 MtrunA17_Chr8g0334861 42.495 473 252 12 4 467 1 462 6.81e-122 364
Msa1271200 MtrunA17_Chr8g0339461 41.754 479 263 7 4 471 1 474 1.06e-119 358
Msa1271200 MtrunA17_Chr8g0334851 43.396 477 244 13 4 465 1 466 5.40e-118 354
Msa1271200 MtrunA17_Chr8g0339631 42.558 477 259 8 4 471 1 471 1.20e-117 353
Msa1271200 MtrunA17_Chr8g0339441 42.348 477 221 9 4 471 1 432 6.56e-110 332
Msa1271200 MtrunA17_Chr8g0339601 48.817 338 160 6 142 471 1 333 3.99e-105 316
Msa1271200 MtrunA17_Chr7g0232351 45.692 383 198 6 4 381 1 378 1.24e-103 314
Msa1271200 MtrunA17_Chr8g0370941 38.645 502 249 17 4 465 3 485 2.01e-97 302
Msa1271200 MtrunA17_Chr5g0403641 36.364 484 250 14 3 465 53 499 2.45e-91 287
Msa1271200 MtrunA17_Chr3g0079731 35.000 480 289 9 4 464 1 476 5.39e-85 269
Msa1271200 MtrunA17_Chr6g0462531 35.073 479 272 11 7 465 2 461 6.47e-83 263
Msa1271200 MtrunA17_Chr6g0462521 33.333 471 277 9 7 465 2 447 1.22e-81 260
Msa1271200 MtrunA17_Chr1g0153461 56.542 214 91 2 259 471 3 215 9.46e-81 249
Msa1271200 MtrunA17_Chr6g0462551 34.100 478 278 12 7 465 2 461 7.75e-78 251
Msa1271200 MtrunA17_Chr6g0462541 32.135 473 287 9 10 465 5 460 2.92e-71 233
Msa1271200 MtrunA17_Chr5g0442541 31.303 476 294 13 6 464 2 461 3.48e-71 233
Msa1271200 MtrunA17_Chr2g0302991 32.704 477 283 14 10 468 6 462 1.06e-70 231
Msa1271200 MtrunA17_Chr6g0462571 31.733 479 285 12 7 465 2 458 2.76e-70 231
Msa1271200 MtrunA17_Chr5g0442491 31.470 483 305 11 6 470 2 476 1.40e-69 229
Msa1271200 MtrunA17_Chr5g0442581 32.716 486 285 17 6 464 2 472 1.10e-68 228
Msa1271200 MtrunA17_Chr5g0448521 30.642 483 302 15 6 470 2 469 3.34e-68 225
Msa1271200 MtrunA17_Chr5g0442561 31.762 488 295 16 6 470 2 474 1.18e-67 224
Msa1271200 MtrunA17_Chr2g0302961 31.818 484 281 15 10 468 6 465 3.47e-67 222
Msa1271200 MtrunA17_Chr5g0429681 31.116 466 280 13 4 449 39 483 3.65e-66 221
Msa1271200 MtrunA17_Chr5g0429711 31.809 481 285 16 1 464 3 457 2.52e-65 218
Msa1271200 MtrunA17_Chr5g0442521 30.498 482 300 14 6 464 2 471 1.03e-63 214
Msa1271200 MtrunA17_Chr5g0442601 30.957 491 299 15 6 470 401 877 2.91e-62 217
Msa1271200 MtrunA17_Chr5g0442601 33.019 318 178 8 95 404 43 333 5.15e-40 154
Msa1271200 MtrunA17_Chr4g0044511 32.803 503 265 17 5 468 36 504 7.82e-60 204
Msa1271200 MtrunA17_Chr5g0442511 28.361 476 292 14 6 464 46 489 3.13e-56 194
Msa1271200 MtrunA17_Chr8g0366391 29.555 494 293 13 10 471 10 480 1.35e-55 192
Msa1271200 MtrunA17_Chr5g0420801 31.377 494 277 17 3 469 1 459 3.87e-55 191
Msa1271200 MtrunA17_Chr6g0464881 29.555 494 278 16 2 468 4 454 6.20e-53 184
Msa1271200 MtrunA17_Chr5g0440421 30.488 492 284 14 6 458 7 479 9.92e-51 179
Msa1271200 MtrunA17_Chr4g0066221 29.495 495 287 18 10 468 12 480 3.27e-50 178
Msa1271200 MtrunA17_Chr4g0044521 29.832 476 290 15 10 464 10 462 4.74e-50 177
Msa1271200 MtrunA17_Chr3g0078841 28.854 506 270 21 1 457 2 466 5.30e-50 177
Msa1271200 MtrunA17_Chr6g0464921 29.012 486 280 15 8 468 10 455 5.74e-50 176
Msa1271200 MtrunA17_Chr6g0464841 29.472 492 261 19 12 468 14 454 1.16e-49 176
Msa1271200 MtrunA17_Chr3g0092641 31.138 501 263 22 8 464 11 473 2.51e-49 175
Msa1271200 MtrunA17_Chr7g0265141 30.629 493 265 18 12 457 12 474 2.54e-49 175
Msa1271200 MtrunA17_Chr6g0464871 29.637 496 261 17 12 471 26 469 3.72e-49 174
Msa1271200 MtrunA17_Chr5g0414331 28.364 483 283 14 10 470 14 455 4.18e-49 174
Msa1271200 MtrunA17_Chr7g0249981 29.032 496 277 19 3 470 20 468 7.95e-49 174
Msa1271200 MtrunA17_Chr7g0275681 30.364 494 273 18 4 457 7 469 8.15e-49 174
Msa1271200 MtrunA17_Chr7g0265051 30.140 501 286 16 3 462 1 478 8.76e-49 174
Msa1271200 MtrunA17_Chr7g0243871 37.329 292 154 8 193 468 194 472 1.69e-48 173
Msa1271200 MtrunA17_Chr4g0066151 36.525 282 145 9 212 468 207 479 1.74e-48 173
Msa1271200 MtrunA17_Chr6g0463861 35.971 278 152 8 212 468 201 473 2.27e-48 173
Msa1271200 MtrunA17_Chr3g0112771 30.526 475 278 17 10 468 13 451 2.39e-48 172
Msa1271200 MtrunA17_Chr4g0066281 37.906 277 142 8 213 468 199 466 2.76e-48 172
Msa1271200 MtrunA17_Chr5g0426431 32.016 506 248 23 10 464 13 473 2.95e-48 172
Msa1271200 MtrunA17_Chr7g0265041 30.986 497 267 19 8 457 10 477 9.89e-48 171
Msa1271200 MtrunA17_Chr8g0374901 30.346 491 285 18 10 468 13 478 1.06e-47 171
Msa1271200 MtrunA17_Chr4g0044501 32.481 391 225 12 97 468 105 475 1.15e-47 171
Msa1271200 MtrunA17_Chr6g0454341 28.287 502 290 18 2 464 3 473 1.33e-47 171
Msa1271200 MtrunA17_Chr5g0426401 36.624 314 159 13 173 470 20 309 2.21e-47 166
Msa1271200 MtrunA17_Chr7g0243781 36.860 293 157 8 193 468 194 475 2.86e-47 170
Msa1271200 MtrunA17_Chr4g0050341 29.020 510 278 18 7 468 17 490 2.96e-47 170
Msa1271200 MtrunA17_Chr5g0414321 28.247 485 297 14 2 470 4 453 4.36e-47 169
Msa1271200 MtrunA17_Chr8g0359821 29.939 491 274 19 6 457 7 466 1.19e-46 168
Msa1271200 MtrunA17_Chr3g0079711 48.128 187 84 3 286 464 3 184 1.54e-46 159
Msa1271200 MtrunA17_Chr7g0265101 29.249 506 286 19 3 462 1 480 1.74e-46 168
Msa1271200 MtrunA17_Chr4g0042891 31.478 467 269 19 10 447 8 452 2.38e-46 167
Msa1271200 MtrunA17_Chr6g0454401 27.565 497 283 18 5 457 6 469 2.48e-46 167
Msa1271200 MtrunA17_Chr7g0218811 30.583 412 241 14 65 464 67 445 2.56e-46 166
Msa1271200 MtrunA17_Chr2g0278711 30.452 509 268 20 6 468 8 476 3.13e-46 167
Msa1271200 MtrunA17_Chr1g0173121 35.254 295 176 8 181 468 176 462 3.98e-46 166
Msa1271200 MtrunA17_Chr6g0453951 28.340 494 282 17 5 457 53 515 4.09e-46 167
Msa1271200 MtrunA17_Chr4g0053501 28.511 470 308 13 10 468 12 464 4.65e-46 167
Msa1271200 MtrunA17_Chr8g0369341 29.938 481 301 13 3 464 1 464 7.23e-46 166
Msa1271200 MtrunA17_Chr6g0464861 29.518 498 266 22 5 468 7 453 7.92e-46 165
Msa1271200 MtrunA17_Chr7g0249961 37.247 247 125 6 236 470 33 261 8.69e-46 160
Msa1271200 MtrunA17_Chr7g0265151 31.844 358 203 12 124 457 132 472 9.62e-46 166
Msa1271200 MtrunA17_Chr8g0374971 36.823 277 149 7 213 468 209 480 1.02e-45 166
Msa1271200 MtrunA17_Chr8g0377921 28.367 490 281 14 10 464 5 459 1.10e-45 165
Msa1271200 MtrunA17_Chr2g0329111 30.335 478 259 18 4 442 1 443 1.27e-45 166
Msa1271200 MtrunA17_Chr4g0014061 32.911 316 177 8 179 470 170 474 1.69e-45 165
Msa1271200 MtrunA17_Chr6g0454151 35.570 298 157 12 173 457 191 466 2.11e-45 165
Msa1271200 MtrunA17_Chr4g0042931 31.070 486 282 19 10 470 8 465 2.17e-45 164
Msa1271200 MtrunA17_Chr6g0454301 28.486 502 283 18 5 464 259 726 3.47e-45 168
Msa1271200 MtrunA17_Chr6g0454301 34.335 233 125 6 236 457 3 218 1.04e-35 140
Msa1271200 MtrunA17_Chr6g0454191 28.713 505 267 21 5 457 6 469 1.38e-44 162
Msa1271200 MtrunA17_Chr6g0454321 27.743 483 285 18 5 451 6 460 3.09e-44 164
Msa1271200 MtrunA17_Chr1g0159551 29.442 394 242 10 82 468 95 459 3.76e-44 161
Msa1271200 MtrunA17_Chr6g0454201 34.343 297 164 10 173 457 192 469 5.13e-44 161
Msa1271200 MtrunA17_Chr6g0454261 31.565 377 214 13 108 464 123 475 7.83e-44 160
Msa1271200 MtrunA17_Chr7g0217881 28.630 489 289 15 2 464 3 457 9.68e-44 160
Msa1271200 MtrunA17_Chr6g0449991 35.673 342 185 12 4 335 1 317 2.45e-43 155
Msa1271200 MtrunA17_Chr5g0401851 29.114 395 245 8 97 470 105 485 4.01e-43 159
Msa1271200 MtrunA17_Chr4g0032331 30.353 481 265 17 10 464 9 445 4.49e-43 158
Msa1271200 MtrunA17_Chr7g0218791 28.976 459 266 13 8 443 4 425 4.80e-43 157
Msa1271200 MtrunA17_Chr6g0454121 31.034 377 216 13 108 464 122 474 6.44e-43 158
Msa1271200 MtrunA17_Chr4g0066201 33.788 293 167 7 196 468 189 474 6.57e-43 158
Msa1271200 MtrunA17_Chr7g0243771 28.628 503 293 17 4 468 1 475 7.50e-43 158
Msa1271200 MtrunA17_Chr7g0250001 27.959 490 292 19 3 471 1 450 8.41e-43 157
Msa1271200 MtrunA17_Chr7g0249931 29.796 490 262 21 12 468 43 483 1.00e-42 157
Msa1271200 MtrunA17_Chr6g0463851 33.016 315 178 11 179 471 182 485 1.01e-42 157
Msa1271200 MtrunA17_Chr4g0011051 28.740 508 279 19 1 457 1 476 1.28e-42 157
Msa1271200 MtrunA17_Chr6g0454131 33.553 304 171 11 173 464 190 474 1.39e-42 157
Msa1271200 MtrunA17_Chr4g0066261 27.071 495 309 18 6 468 7 481 1.51e-42 157
Msa1271200 MtrunA17_Chr8g0367221 28.125 480 300 11 10 468 1289 1744 1.63e-42 161
Msa1271200 MtrunA17_Chr8g0367221 27.533 454 286 12 10 443 799 1229 7.14e-40 154
Msa1271200 MtrunA17_Chr8g0367221 27.079 469 268 15 10 443 13 442 7.53e-38 147
Msa1271200 MtrunA17_Chr3g0118671 28.317 505 296 18 4 470 1 477 1.73e-42 157
Msa1271200 MtrunA17_Chr8g0336331 33.333 318 172 12 163 464 179 472 1.75e-42 157
Msa1271200 MtrunA17_Chr8g0374941 35.943 281 146 9 213 468 1146 1417 2.55e-42 160
Msa1271200 MtrunA17_Chr8g0374941 34.586 266 140 9 213 453 208 464 4.53e-39 151
Msa1271200 MtrunA17_Chr8g0374941 35.636 275 145 8 213 464 673 938 5.21e-39 151
Msa1271200 MtrunA17_Chr8g0361411 29.645 479 277 18 14 469 13 454 2.68e-42 155
Msa1271200 MtrunA17_Chr7g0218821 28.434 415 240 14 65 461 68 443 2.73e-42 155
Msa1271200 MtrunA17_Chr4g0066131 33.333 279 158 9 212 468 202 474 3.20e-42 156
Msa1271200 MtrunA17_Chr2g0278721 28.131 487 307 14 5 470 513 977 4.23e-42 160
Msa1271200 MtrunA17_Chr2g0278721 28.850 461 276 17 5 443 11 441 8.49e-35 138
Msa1271200 MtrunA17_Chr3g0118771 27.593 511 296 19 2 470 14 492 5.40e-42 155
Msa1271200 MtrunA17_Chr3g0118691 27.879 495 297 15 4 464 10 478 5.77e-42 155
Msa1271200 MtrunA17_Chr7g0243801 31.436 404 230 13 90 468 95 476 5.79e-42 155
Msa1271200 MtrunA17_Chr5g0431361 27.593 482 285 16 10 468 13 453 7.45e-42 154
Msa1271200 MtrunA17_Chr4g0053321 35.448 268 153 8 211 468 222 479 8.88e-42 155
Msa1271200 MtrunA17_Chr6g0454181 32.997 297 168 11 173 457 191 468 1.14e-41 154
Msa1271200 MtrunA17_Chr8g0377941 29.228 479 280 17 10 461 8 454 1.23e-41 154
Msa1271200 MtrunA17_Chr8g0350881 36.429 280 146 7 213 468 209 480 1.27e-41 154
Msa1271200 MtrunA17_Chr6g0454141 32.440 373 202 16 108 457 123 468 1.31e-41 154
Msa1271200 MtrunA17_Chr6g0482061 28.302 477 278 17 10 448 12 462 1.40e-41 154
Msa1271200 MtrunA17_Chr4g0044481 35.686 255 126 5 189 431 196 424 1.56e-41 153
Msa1271200 MtrunA17_Chr3g0112761 28.452 478 295 15 3 465 1 446 1.59e-41 154
Msa1271200 MtrunA17_Chr2g0294941 32.970 367 198 16 113 450 14 361 1.65e-41 152
Msa1271200 MtrunA17_Chr4g0066171 27.364 497 293 17 4 468 16 476 1.66e-41 154
Msa1271200 MtrunA17_Chr3g0118721 34.848 264 142 7 214 464 39 285 2.01e-41 149
Msa1271200 MtrunA17_Chr1g0179901 28.571 490 284 20 10 457 17 482 2.11e-41 154
Msa1271200 MtrunA17_Chr5g0423981 31.884 345 196 12 139 464 116 440 2.24e-41 153
Msa1271200 MtrunA17_Chr8g0337381 54.962 131 56 2 341 471 1 128 2.72e-41 144
Msa1271200 MtrunA17_Chr5g0431441 29.757 494 268 20 10 469 19 467 3.39e-41 153
Msa1271200 MtrunA17_Chr7g0218831 27.778 468 294 15 8 466 5 437 5.46e-41 152
Msa1271200 MtrunA17_Chr8g0380531 28.138 494 273 15 10 468 11 457 8.49e-41 152
Msa1271200 MtrunA17_Chr6g0454271 34.237 295 154 10 180 457 4 275 8.57e-41 147
Msa1271200 MtrunA17_Chr7g0218311 35.145 276 155 6 212 468 213 483 1.08e-40 152
Msa1271200 MtrunA17_Chr2g0294931 35.507 276 153 7 213 468 211 481 1.10e-40 152
Msa1271200 MtrunA17_Chr5g0401721 30.523 344 202 10 142 464 139 466 1.39e-40 151
Msa1271200 MtrunA17_Chr8g0382021 36.667 270 158 6 206 468 225 488 1.60e-40 151
Msa1271200 MtrunA17_Chr5g0412101 27.699 491 286 17 8 464 11 466 1.64e-40 151
Msa1271200 MtrunA17_Chr3g0118701 27.586 493 301 17 4 464 10 478 1.78e-40 151
Msa1271200 MtrunA17_Chr6g0454291 28.283 495 285 19 3 457 1 465 1.84e-40 151
Msa1271200 MtrunA17_Chr7g0243681 32.923 325 185 8 164 468 168 479 2.59e-40 151
Msa1271200 MtrunA17_Chr7g0243631 32.317 328 188 7 164 468 170 486 2.66e-40 151
Msa1271200 MtrunA17_Chr4g0060511 34.767 279 148 6 213 468 220 487 3.40e-40 151
Msa1271200 MtrunA17_Chr6g0453961 32.660 297 170 8 180 464 207 485 3.86e-40 150
Msa1271200 MtrunA17_Chr2g0294921 35.145 276 154 7 213 468 360 630 3.96e-40 152
Msa1271200 MtrunA17_Chr5g0412111 28.033 478 299 15 8 464 4 457 5.20e-40 150
Msa1271200 MtrunA17_Chr6g0454221 35.341 249 131 8 236 471 3 234 1.58e-39 144
Msa1271200 MtrunA17_Chr1g0161351 30.789 393 238 14 85 464 122 493 1.60e-39 149
Msa1271200 MtrunA17_Chr8g0355221 36.905 252 132 6 239 471 246 489 2.47e-39 148
Msa1271200 MtrunA17_Chr3g0122001 29.046 482 292 17 12 464 9 469 4.01e-39 151
Msa1271200 MtrunA17_Chr3g0122001 33.438 317 177 12 170 464 644 948 1.12e-35 140
Msa1271200 MtrunA17_Chr3g0118711 26.733 505 302 17 2 468 6 480 4.23e-39 147
Msa1271200 MtrunA17_Chr7g0235051 33.642 324 174 9 164 461 138 446 5.01e-39 147
Msa1271200 MtrunA17_Chr5g0419771 34.211 266 145 7 213 457 245 501 5.46e-39 148
Msa1271200 MtrunA17_Chr7g0243931 28.039 510 289 17 5 468 13 490 5.69e-39 147
Msa1271200 MtrunA17_Chr1g0207861 32.381 315 187 9 168 470 170 470 8.05e-39 147
Msa1271200 MtrunA17_Chr6g0454331 27.634 503 294 18 3 464 1 474 8.46e-39 147
Msa1271200 MtrunA17_Chr5g0419761 33.333 312 166 11 173 464 192 481 1.31e-38 146
Msa1271200 MtrunA17_Chr1g0207951 33.716 261 144 7 214 464 863 1104 2.56e-38 149
Msa1271200 MtrunA17_Chr1g0207951 29.006 362 201 12 124 464 240 566 5.24e-38 148
Msa1271200 MtrunA17_Chr6g0454211 27.677 495 288 19 3 457 291 755 2.91e-38 148
Msa1271200 MtrunA17_Chr6g0454211 29.310 232 105 9 162 381 52 236 1.18e-20 95.5
Msa1271200 MtrunA17_Chr7g0218841 28.059 474 286 19 8 466 5 438 3.30e-38 144
Msa1271200 MtrunA17_Chr3g0106251 32.168 286 163 8 181 458 21 283 3.54e-38 141
Msa1271200 MtrunA17_Chr5g0428081 33.696 276 158 6 213 468 209 479 3.59e-38 145
Msa1271200 MtrunA17_Chr5g0412131 27.216 485 295 15 8 464 11 465 4.99e-38 144
Msa1271200 MtrunA17_Chr3g0118661 28.664 464 258 17 5 428 9 439 5.46e-38 144
Msa1271200 MtrunA17_Chr6g0454361 33.091 275 155 8 201 464 220 476 6.04e-38 144
Msa1271200 MtrunA17_Chr1g0207931 32.759 290 168 8 185 464 221 493 6.79e-38 144
Msa1271200 MtrunA17_Chr1g0207971 28.900 391 222 15 96 464 93 449 8.07e-38 143
Msa1271200 MtrunA17_Chr1g0207981 32.609 276 161 6 203 468 212 472 9.38e-38 144
Msa1271200 MtrunA17_Chr6g0452771 29.056 413 244 15 79 464 85 475 1.15e-37 144
Msa1271200 MtrunA17_Chr7g0243951 35.125 279 146 7 213 468 217 483 1.20e-37 144
Msa1271200 MtrunA17_Chr3g0098111 30.581 327 189 8 168 470 159 471 1.25e-37 143
Msa1271200 MtrunA17_Chr3g0106231 26.695 472 272 14 10 457 19 440 2.52e-37 142
Msa1271200 MtrunA17_Chr8g0374931 34.420 276 156 8 213 468 211 481 3.52e-37 142
Msa1271200 MtrunA17_Chr7g0243761 34.686 271 129 8 213 454 217 468 5.10e-37 141
Msa1271200 MtrunA17_Chr6g0454171 34.201 269 127 10 203 457 66 298 5.38e-37 138
Msa1271200 MtrunA17_Chr4g0069611 28.131 487 297 17 5 470 10 464 6.22e-37 141
Msa1271200 MtrunA17_Chr4g0072761 33.216 283 160 7 182 464 195 448 6.34e-37 141
Msa1271200 MtrunA17_Chr2g0278741 28.758 459 279 16 5 443 93 523 1.30e-36 142
Msa1271200 MtrunA17_Chr8g0365811 33.086 269 163 8 206 464 692 953 2.58e-36 142
Msa1271200 MtrunA17_Chr8g0365811 31.143 350 212 11 96 430 102 437 5.08e-36 142
Msa1271200 MtrunA17_Chr5g0416741 26.465 495 303 14 10 468 14 483 2.94e-36 140
Msa1271200 MtrunA17_Chr8g0334841 48.227 141 70 2 179 317 6 145 3.59e-36 131
Msa1271200 MtrunA17_Chr7g0243711 38.462 221 114 4 259 468 107 316 3.75e-36 136
Msa1271200 MtrunA17_Chr3g0121991 28.750 480 293 20 12 463 82 540 4.03e-36 140
Msa1271200 MtrunA17_Chr7g0243851 34.875 281 145 8 213 468 175 442 4.21e-36 139
Msa1271200 MtrunA17_Chr7g0243811 36.948 249 135 8 164 404 141 375 8.75e-36 136
Msa1271200 MtrunA17_Chr7g0241781 27.766 461 250 17 6 444 6 405 1.68e-35 137
Msa1271200 MtrunA17_Chr3g0118751 26.863 510 268 17 4 470 1 448 1.98e-35 137
Msa1271200 MtrunA17_Chr1g0165701 36.087 230 125 4 252 471 269 486 2.28e-35 137
Msa1271200 MtrunA17_Chr7g0243861 36.071 280 143 7 213 468 220 487 2.74e-35 137
Msa1271200 MtrunA17_Chr5g0410941 26.166 493 309 17 10 471 24 492 3.16e-35 137
Msa1271200 MtrunA17_Chr4g0029131 26.004 473 320 12 3 468 6 455 4.04e-35 138
Msa1271200 MtrunA17_Chr7g0265111 36.797 231 123 6 244 464 294 511 5.25e-35 137
Msa1271200 MtrunA17_Chr2g0307961 27.416 507 278 16 5 468 9 468 7.90e-35 135
Msa1271200 MtrunA17_Chr6g0454351 29.032 310 183 10 163 464 180 460 1.79e-34 134
Msa1271200 MtrunA17_Chr5g0409591 34.191 272 150 8 213 464 212 474 2.02e-34 134
Msa1271200 MtrunA17_Chr5g0432731 30.742 283 168 6 193 466 31 294 3.50e-34 130
Msa1271200 MtrunA17_Chr7g0243911 41.791 201 91 6 260 448 22 208 3.75e-34 127
Msa1271200 MtrunA17_Chr5g0431401 26.250 480 291 17 10 468 11 448 7.29e-34 132
Msa1271200 MtrunA17_Chr7g0243611 36.957 230 113 7 213 421 78 296 7.77e-34 129
Msa1271200 MtrunA17_Chr4g0072771 28.809 361 223 10 109 464 130 461 4.04e-33 130
Msa1271200 MtrunA17_Chr1g0207831 28.691 359 209 11 124 464 130 459 8.35e-33 130
Msa1271200 MtrunA17_Chr5g0393591 29.344 259 138 6 214 470 222 437 8.92e-33 129
Msa1271200 MtrunA17_Chr2g0302851 27.061 473 267 16 5 444 11 438 1.16e-32 129
Msa1271200 MtrunA17_Chr5g0431421 30.519 308 179 9 172 468 165 448 2.91e-32 128
Msa1271200 MtrunA17_Chr8g0336321 34.632 231 129 5 221 442 222 439 5.12e-32 127
Msa1271200 MtrunA17_Chr7g0241801 27.033 455 261 15 6 444 6 405 1.67e-31 125
Msa1271200 MtrunA17_Chr6g0466831 26.598 485 296 17 10 470 19 467 1.68e-31 126
Msa1271200 MtrunA17_Chr6g0464091 27.489 462 286 15 5 444 13 447 2.06e-31 125
Msa1271200 MtrunA17_Chr8g0336251 34.199 231 130 5 221 442 222 439 5.82e-31 124
Msa1271200 MtrunA17_Chr5g0427571 37.566 189 106 3 254 442 97 273 8.11e-31 120
Msa1271200 MtrunA17_Chr6g0463891 25.301 498 307 14 10 468 13 484 1.21e-30 124
Msa1271200 MtrunA17_Chr5g0431371 25.833 480 293 17 10 468 11 448 3.27e-30 122
Msa1271200 MtrunA17_Chr4g0039881 25.745 470 290 14 18 464 1 434 6.46e-30 121
Msa1271200 MtrunA17_Chr8g0355011 37.640 178 94 5 268 445 178 338 1.66e-29 119
Msa1271200 MtrunA17_Chr6g0466841 25.918 490 293 19 10 470 19 467 1.78e-29 120
Msa1271200 MtrunA17_Chr4g0029151 24.444 450 304 11 3 442 14 437 1.94e-29 120
Msa1271200 MtrunA17_Chr5g0442501 26.923 312 211 8 6 308 2 305 2.61e-29 117
Msa1271200 MtrunA17_Chr3g0079721 28.621 290 187 8 7 280 3 288 2.84e-29 116
Msa1271200 MtrunA17_Chr6g0454371 35.838 173 94 5 285 457 4 159 5.75e-29 112
Msa1271200 MtrunA17_Chr3g0092031 35.165 182 104 3 262 443 6 173 8.82e-29 112
Msa1271200 MtrunA17_Chr5g0416821 26.707 498 287 17 10 468 15 473 5.33e-28 116
Msa1271200 MtrunA17_Chr1g0196851 24.943 437 307 9 10 442 50 469 6.87e-28 116
Msa1271200 MtrunA17_Chr8g0357361 35.500 200 108 5 213 404 63 249 2.20e-27 110
Msa1271200 MtrunA17_Chr5g0448551 25.167 449 283 17 3 428 1 419 6.03e-27 112
Msa1271200 MtrunA17_Chr6g0454251 28.095 420 235 19 3 381 1 394 1.45e-26 110
Msa1271200 MtrunA17_Chr4g0040691 24.661 442 300 13 10 441 9 427 1.65e-26 111
Msa1271200 MtrunA17_Chr4g0066141 35.583 163 94 3 320 471 192 354 6.90e-26 108
Msa1271200 MtrunA17_Chr2g0283041 27.615 239 161 3 208 446 206 432 1.03e-25 109
Msa1271200 MtrunA17_Chr8g0336261 36.000 150 79 5 282 431 1 133 7.90e-25 99.8
Msa1271200 MtrunA17_Chr5g0431431 30.233 258 146 7 173 425 116 344 8.63e-24 102
Msa1271200 MtrunA17_Chr6g0454231 27.843 255 123 7 211 457 5 206 1.51e-23 103
Msa1271200 MtrunA17_Chr4g0040711 23.583 441 306 11 10 441 9 427 6.84e-23 100
Msa1271200 MtrunA17_Chr2g0319801 26.503 449 283 17 10 441 9 427 9.45e-23 100
Msa1271200 MtrunA17_Chr4g0029161 24.426 479 294 15 2 468 5 427 1.13e-22 100
Msa1271200 MtrunA17_Chr7g0231631 31.449 283 139 9 211 468 7 259 1.27e-22 97.4
Msa1271200 MtrunA17_Chr5g0442551 26.689 296 179 11 68 351 25 294 4.81e-21 93.2
Msa1271200 MtrunA17_Chr2g0319791 24.609 447 294 17 10 441 9 427 8.12e-20 91.7
Msa1271200 MtrunA17_Chr1g0207881 34.437 151 89 4 317 464 237 380 8.25e-20 91.3
Msa1271200 MtrunA17_Chr2g0319731 25.942 451 283 17 10 441 26 444 1.06e-19 91.7
Msa1271200 MtrunA17_Chr2g0319761 24.222 450 300 13 10 443 9 433 1.12e-19 91.3
Msa1271200 MtrunA17_Chr2g0321331 30.622 209 113 4 267 470 91 272 1.46e-19 88.6
Msa1271200 MtrunA17_Chr2g0319751 35.519 183 105 4 260 441 734 904 8.56e-19 89.7
Msa1271200 MtrunA17_Chr2g0319751 37.607 117 70 2 326 441 289 403 2.02e-16 82.4
Msa1271200 MtrunA17_Chr7g0243731 47.887 71 37 0 335 405 2 72 1.44e-17 77.4
Msa1271200 MtrunA17_Chr6g0469961 37.500 144 71 6 172 302 27 164 1.53e-17 80.1
Msa1271200 MtrunA17_Chr6g0449971 52.000 75 35 1 391 465 1 74 7.51e-17 75.5
Msa1271200 MtrunA17_Chr6g0453941 27.136 199 129 6 135 321 77 271 1.01e-15 77.4
Msa1271200 MtrunA17_Chr6g0453981 32.192 146 85 5 173 306 61 204 1.50e-14 73.2
Msa1271200 MtrunA17_Chr7g0250021 29.448 326 171 17 12 307 15 311 3.65e-14 73.6
Msa1271200 MtrunA17_Chr6g0454391 46.269 67 31 2 358 424 13 74 1.08e-13 67.8
Msa1271200 MtrunA17_Chr6g0454111 32.593 135 78 4 180 302 50 183 6.74e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271200 AT4G01070.1 45.299 468 242 10 5 465 4 464 1.41e-133 394
Msa1271200 AT1G01420.2 45.923 466 235 12 8 465 10 466 8.10e-131 387
Msa1271200 AT1G01420.1 45.923 466 235 12 8 465 7 463 9.76e-131 387
Msa1271200 AT1G01390.1 45.923 466 234 12 8 464 7 463 4.69e-120 360
Msa1271200 AT1G01390.2 45.923 466 234 12 8 464 24 480 7.37e-120 360
Msa1271200 AT3G50740.1 37.967 482 268 12 3 465 1 470 1.43e-98 305
Msa1271200 AT5G26310.1 36.810 489 272 15 1 471 1 470 2.57e-96 299
Msa1271200 AT5G66690.1 36.864 472 265 13 1 457 1 454 6.28e-92 288
Msa1271200 AT2G18570.1 35.908 479 277 16 7 469 3 467 1.23e-82 263
Msa1271200 AT4G36770.1 35.683 454 264 13 11 450 6 445 2.22e-80 257
Msa1271200 AT3G16520.3 35.118 467 274 11 10 464 6 455 2.27e-79 254
Msa1271200 AT4G01070.2 42.165 351 188 10 5 348 4 346 1.41e-77 246
Msa1271200 AT1G07260.1 33.473 478 276 13 14 468 13 471 4.51e-77 249
Msa1271200 AT3G16520.2 34.573 457 270 11 10 454 6 445 2.94e-75 243
Msa1271200 AT3G16520.1 34.573 457 270 11 10 454 6 445 3.36e-75 243
Msa1271200 AT2G18560.1 39.005 382 208 11 97 467 8 375 2.17e-74 239
Msa1271200 AT1G07250.1 31.429 490 293 13 4 468 1 472 1.42e-72 237
Msa1271200 AT3G21790.1 33.124 477 284 12 10 461 5 471 1.50e-72 238
Msa1271200 AT3G21800.1 33.472 481 284 14 4 461 1 468 5.46e-71 233
Msa1271200 AT3G21780.1 34.461 473 273 13 10 461 5 461 1.34e-70 232
Msa1271200 AT3G21750.1 31.635 471 289 8 10 461 5 461 9.41e-68 224
Msa1271200 AT2G29730.1 29.684 475 292 15 10 464 6 458 1.27e-67 224
Msa1271200 AT2G29750.1 31.198 484 289 17 10 468 9 473 1.47e-67 224
Msa1271200 AT4G15280.1 31.809 481 286 15 10 464 5 469 1.75e-67 224
Msa1271200 AT4G15280.2 31.809 481 286 15 10 464 37 501 2.45e-67 224
Msa1271200 AT2G29740.1 31.423 471 284 14 10 457 9 463 1.42e-65 219
Msa1271200 AT4G15260.1 34.916 358 215 7 117 464 1 350 2.32e-64 212
Msa1271200 AT2G29710.1 29.787 470 292 14 10 461 6 455 1.78e-63 213
Msa1271200 AT3G21760.1 32.720 489 272 15 10 461 5 473 7.06e-63 212
Msa1271200 AT1G07240.1 30.470 489 283 13 6 460 2 467 1.38e-62 211
Msa1271200 AT5G14860.1 32.238 487 278 13 12 468 11 475 3.34e-57 197
Msa1271200 AT2G15490.1 30.414 411 259 9 74 470 85 482 1.26e-56 195
Msa1271200 AT4G34131.1 29.472 492 293 14 5 464 6 475 2.66e-56 194
Msa1271200 AT2G15490.3 30.900 411 254 10 74 470 85 479 3.15e-56 194
Msa1271200 AT2G36800.1 30.101 495 278 14 12 464 15 483 1.65e-55 192
Msa1271200 AT2G16890.2 31.211 487 278 15 10 468 10 467 2.36e-55 192
Msa1271200 AT2G15480.1 30.788 419 255 10 64 470 87 482 7.82e-55 191
Msa1271200 AT2G15480.2 30.536 429 253 11 64 470 87 492 3.98e-54 189
Msa1271200 AT2G36770.1 29.243 489 289 17 12 464 17 484 1.48e-52 185
Msa1271200 AT1G05680.1 28.782 476 300 11 4 466 1 450 3.72e-52 182
Msa1271200 AT4G34135.1 29.719 498 285 12 5 464 7 477 4.39e-52 183
Msa1271200 AT1G05675.1 29.339 484 287 14 4 466 1 450 7.61e-52 182
Msa1271200 AT1G22340.1 30.754 504 276 21 6 468 10 481 6.88e-51 180
Msa1271200 AT2G36780.1 30.801 487 284 15 12 464 17 484 7.69e-51 180
Msa1271200 AT4G34138.1 30.576 399 222 9 93 468 112 478 1.43e-50 179
Msa1271200 AT2G36750.1 29.200 500 274 16 12 464 13 479 1.53e-50 179
Msa1271200 AT2G36760.1 30.435 483 277 17 12 457 17 477 5.10e-50 178
Msa1271200 AT3G53160.1 38.745 271 138 6 213 464 217 478 1.35e-49 177
Msa1271200 AT1G10400.1 30.909 495 270 19 10 470 8 464 1.62e-49 176
Msa1271200 AT2G36790.1 30.140 501 269 16 12 464 16 483 3.12e-49 176
Msa1271200 AT2G43820.1 28.343 501 273 18 3 470 1 448 3.47e-49 174
Msa1271200 AT2G16890.3 30.856 444 251 14 10 426 10 424 9.68e-49 173
Msa1271200 AT1G22400.1 29.800 500 288 20 5 468 9 481 2.21e-48 173
Msa1271200 AT2G31790.1 35.294 306 154 10 184 468 174 456 3.74e-48 172
Msa1271200 AT5G03490.1 29.424 486 275 18 5 464 15 458 2.99e-47 170
Msa1271200 AT2G43840.2 27.515 487 279 15 10 469 8 447 6.11e-47 169
Msa1271200 AT1G22380.1 29.046 482 277 18 6 451 10 462 5.16e-46 167
Msa1271200 AT3G55700.1 29.938 481 282 18 10 471 9 453 6.32e-46 166
Msa1271200 AT2G43840.1 27.310 487 280 15 10 469 8 447 8.11e-46 166
Msa1271200 AT1G22360.1 28.713 505 284 20 6 468 7 477 2.19e-45 165
Msa1271200 AT2G31750.1 34.783 276 140 8 211 468 201 454 2.38e-45 164
Msa1271200 AT2G31750.2 34.783 276 140 8 211 468 201 454 5.79e-45 164
Msa1271200 AT3G46700.1 27.941 476 303 12 1 468 1 444 8.06e-45 163
Msa1271200 AT2G30140.2 28.270 474 292 13 10 470 14 452 1.01e-44 162
Msa1271200 AT3G53150.1 29.537 518 275 19 6 464 19 505 1.04e-44 164
Msa1271200 AT2G30140.1 28.782 476 288 15 10 470 14 453 7.91e-44 160
Msa1271200 AT3G46680.1 27.824 478 302 15 1 466 1 447 1.58e-43 159
Msa1271200 AT2G36970.1 26.253 499 303 15 5 470 6 472 1.73e-43 160
Msa1271200 AT1G24100.1 28.571 490 282 14 7 468 9 458 1.70e-42 157
Msa1271200 AT3G46690.1 27.105 487 302 15 1 470 1 451 1.89e-42 156
Msa1271200 AT2G23260.1 27.463 477 294 11 10 468 11 453 3.61e-42 155
Msa1271200 AT1G78270.1 28.926 484 279 17 5 452 9 463 3.92e-42 156
Msa1271200 AT5G59580.1 28.337 487 290 16 1 468 1 447 8.28e-42 155
Msa1271200 AT5G17050.1 30.055 366 231 7 108 470 115 458 1.36e-41 154
Msa1271200 AT3G55710.1 29.193 483 287 16 10 471 9 457 1.63e-41 154
Msa1271200 AT5G05880.1 32.997 297 178 7 179 471 172 451 9.08e-41 152
Msa1271200 AT1G05530.1 27.941 476 305 15 7 468 3 454 1.86e-40 151
Msa1271200 AT1G22360.2 28.450 471 264 19 6 432 7 448 3.37e-40 150
Msa1271200 AT3G46650.1 29.268 451 268 17 39 471 11 428 3.57e-40 150
Msa1271200 AT2G23250.1 30.671 313 191 5 164 468 141 435 3.76e-40 150
Msa1271200 AT1G05560.1 27.215 474 298 16 8 464 4 447 5.19e-40 150
Msa1271200 AT1G05560.2 27.215 474 298 16 8 464 54 497 6.69e-40 150
Msa1271200 AT5G12890.1 29.424 486 279 20 10 457 11 470 2.39e-39 149
Msa1271200 AT1G51210.1 28.477 453 272 16 7 444 18 433 2.85e-39 147
Msa1271200 AT1G22370.2 30.898 479 267 18 6 451 10 457 3.09e-39 148
Msa1271200 AT1G22370.1 36.755 302 158 11 165 451 4 287 1.46e-38 142
Msa1271200 AT5G59590.1 26.216 473 309 14 6 468 7 449 3.71e-38 144
Msa1271200 AT5G38040.1 26.797 459 296 15 20 468 21 449 4.40e-38 144
Msa1271200 AT5G38010.1 27.500 480 290 15 10 468 11 453 4.41e-38 144
Msa1271200 AT1G73880.1 29.158 487 287 20 5 464 7 462 4.60e-38 145
Msa1271200 AT3G11340.1 27.383 493 290 17 1 471 1 447 8.42e-38 144
Msa1271200 AT1G30530.1 31.124 347 205 10 120 457 118 439 1.17e-37 143
Msa1271200 AT3G46660.1 27.484 473 298 18 4 461 6 448 1.48e-37 143
Msa1271200 AT5G49690.1 26.432 454 276 12 10 441 11 428 3.43e-37 142
Msa1271200 AT3G46670.1 28.421 475 289 18 4 461 1 441 1.06e-36 140
Msa1271200 AT5G05890.1 33.333 297 177 8 179 471 176 455 1.25e-36 140
Msa1271200 AT4G15550.1 32.687 361 217 12 113 464 126 469 1.25e-36 141
Msa1271200 AT2G30150.2 26.596 470 295 14 10 464 14 448 7.90e-36 138
Msa1271200 AT2G30150.1 26.767 467 292 14 13 464 1 432 1.22e-35 137
Msa1271200 AT2G26480.1 31.025 361 217 11 113 464 104 441 1.45e-35 137
Msa1271200 AT3G21560.1 29.496 278 172 6 201 468 209 472 2.05e-35 138
Msa1271200 AT4G15490.1 25.813 492 298 16 10 468 9 466 2.83e-35 137
Msa1271200 AT3G02100.1 26.452 465 276 15 7 443 11 437 2.86e-35 137
Msa1271200 AT5G17030.1 27.160 405 253 10 81 471 82 458 4.00e-35 136
Msa1271200 AT5G05860.1 32.432 259 157 5 213 468 204 447 1.03e-34 135
Msa1271200 AT2G28080.1 30.769 338 209 12 125 456 142 460 1.22e-34 135
Msa1271200 AT4G15500.1 26.148 501 298 17 1 468 1 462 1.42e-34 135
Msa1271200 AT1G06000.1 35.448 268 150 8 213 468 177 433 1.07e-33 132
Msa1271200 AT5G65550.1 25.221 452 276 14 10 433 10 427 1.18e-33 132
Msa1271200 AT5G05870.1 34.188 234 135 5 239 468 236 454 1.54e-33 132
Msa1271200 AT4G15480.1 31.061 264 161 5 214 468 227 478 1.58e-33 132
Msa1271200 AT4G14090.1 31.873 251 145 8 214 457 213 444 4.34e-33 130
Msa1271200 AT3G46720.1 26.819 481 288 15 6 468 6 440 7.49e-33 130
Msa1271200 AT5G05900.1 29.630 297 182 7 179 471 177 450 3.64e-32 128
Msa1271200 AT5G17040.1 26.492 419 247 14 59 457 51 428 1.51e-31 126
Msa1271200 AT2G22590.1 25.918 463 281 17 10 443 16 445 7.36e-31 124
Msa1271200 AT1G64910.1 25.887 479 286 18 12 466 9 442 3.69e-30 122
Msa1271200 AT5G54010.1 25.959 443 284 12 4 434 1 411 3.97e-30 122
Msa1271200 AT1G50580.1 25.466 483 305 14 4 470 1 444 1.57e-29 120
Msa1271200 AT5G17040.2 28.931 318 195 8 148 457 32 326 5.14e-29 117
Msa1271200 AT4G27570.1 25.513 439 278 14 10 434 8 411 1.20e-28 118
Msa1271200 AT5G53990.1 26.471 442 261 17 12 434 9 405 1.64e-28 117
Msa1271200 AT3G29630.1 24.846 487 305 16 4 470 1 446 8.33e-28 115
Msa1271200 AT3G22250.1 31.381 239 125 9 220 446 231 442 4.74e-27 113
Msa1271200 AT4G27560.1 24.554 448 271 14 10 434 8 411 1.30e-26 112
Msa1271200 AT5G54060.1 25.397 441 303 9 10 442 14 436 1.42e-25 109
Msa1271200 AT3G29630.2 32.143 224 130 5 252 470 214 420 2.30e-25 108
Msa1271200 AT2G22930.1 23.516 438 279 13 12 434 9 405 2.47e-25 108
Msa1271200 AT5G37950.1 29.617 287 175 9 104 382 77 344 2.76e-25 107
Msa1271200 AT5G37950.2 29.682 283 174 9 104 382 77 338 3.11e-25 106
Msa1271200 AT1G64920.1 24.053 449 293 16 4 439 1 414 6.16e-23 101
Msa1271200 AT4G09500.1 30.093 216 130 5 246 452 200 403 1.43e-22 100
Msa1271200 AT4G09500.2 30.846 201 118 5 261 452 240 428 8.72e-22 98.2
Msa1271200 AT4G34135.2 25.672 335 201 10 5 306 7 326 7.03e-19 88.2
Msa1271200 AT2G16890.4 25.633 316 190 13 10 297 10 308 7.64e-12 66.6
Msa1271200 AT2G16890.1 25.633 316 190 13 10 297 10 308 7.64e-12 66.6

Find 90 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTAATTCAATGTGTTTA+AGG 0.145467 8_3:-4662541 Msa1271200:CDS
TTGGAAAGAAACAGAGAAAA+TGG 0.199325 8_3:-4662305 Msa1271200:CDS
CATAAACACTTTCAATGATT+TGG 0.223134 8_3:-4662657 Msa1271200:CDS
ATTCAACTTGTGGAATTAAA+TGG 0.235675 8_3:+4663245 None:intergenic
TAAAGAAACAAGGTTAGTTT+TGG 0.255731 8_3:+4662985 None:intergenic
TCTGTTCTTTATGTATGTTT+TGG 0.258567 8_3:-4662494 Msa1271200:CDS
ATTTGGAACCTGAGGTTATA+AGG 0.303175 8_3:-4662640 Msa1271200:CDS
CAACTCAATGAGTTAGCATT+TGG 0.306842 8_3:-4662446 Msa1271200:CDS
GTATTTACCAAATGGTTTCT+TGG 0.330315 8_3:-4662324 Msa1271200:CDS
CAGAAATTCTCATTAGTTGA+TGG 0.334388 8_3:-4662686 Msa1271200:CDS
ACTTTGGAGAGTGTGGTTAA+TGG 0.345363 8_3:-4662194 Msa1271200:CDS
AATTAGACTCATTTCTGTTA+AGG 0.345841 8_3:+4662573 None:intergenic
GCACCTCAAGTTGAGATTCT+TGG 0.351439 8_3:-4662263 Msa1271200:CDS
TTCAAGACTTGTTGCATTGA+AGG 0.352291 8_3:+4663148 None:intergenic
ATTAGACTCATTTCTGTTAA+GGG 0.364012 8_3:+4662574 None:intergenic
CTTGGTCATGGTTCAATTGG+TGG 0.364820 8_3:-4662245 Msa1271200:CDS
TTCAATGTGTTTAAGGTGGT+TGG 0.369384 8_3:-4662534 Msa1271200:CDS
TATGAAACTGTGAATGTTCC+AGG 0.372485 8_3:-4662800 Msa1271200:CDS
TTGACTTCTTGTTGTAGAAA+TGG 0.373174 8_3:+4663019 None:intergenic
TTTCTTTCCAAGAAACCATT+TGG 0.377931 8_3:+4662317 None:intergenic
ATGAGTTTCATTTGTGCTGC+TGG 0.402555 8_3:+4663058 None:intergenic
GATCAGGAATATCTTTGATA+TGG 0.402947 8_3:+4662762 None:intergenic
TCATTTGTGCTGCTGGATCA+TGG 0.407127 8_3:+4663065 None:intergenic
ATTGCTATGGTTCCTTCCCC+TGG 0.414104 8_3:-4663274 Msa1271200:CDS
AATAGAGGCCACGCAATCAT+AGG 0.415417 8_3:+4662167 None:intergenic
ATTCTTGGTCATGGTTCAAT+TGG 0.416708 8_3:-4662248 Msa1271200:CDS
ATCCTTTGTTCTGCAAATAG+AGG 0.418095 8_3:+4662152 None:intergenic
GCAGAGTTAACAGCTTTACT+TGG 0.420196 8_3:+4662380 None:intergenic
CCGAAGATTGATGATGAAAG+TGG 0.440742 8_3:-4662086 Msa1271200:CDS
GCTGTTGCAACAAGTGAAAA+TGG 0.443145 8_3:-4661960 Msa1271200:CDS
CCACTTTCATCATCAATCTT+CGG 0.444906 8_3:+4662086 None:intergenic
GAAATAGAGTCGTTGAGAAT+CGG 0.447307 8_3:+4662851 None:intergenic
GGAATATCTTTGATATGGTA+AGG 0.448112 8_3:+4662767 None:intergenic
AGAAGAATGAAGTCTATGTT+TGG 0.449759 8_3:+4663115 None:intergenic
CCGTTAGAGTATTTACCAAA+TGG 0.450358 8_3:-4662332 Msa1271200:CDS
ATGGATTGGTTGTTCCATCA+TGG 0.450594 8_3:-4662286 Msa1271200:CDS
TTGTGGTTGGGGTTCAACTT+TGG 0.450652 8_3:-4662210 Msa1271200:CDS
AAGAAGTTGCTAACTGTGTA+AGG 0.451651 8_3:-4662049 Msa1271200:CDS
CTTTCACATAGAAGTGGATC+AGG 0.460832 8_3:+4662746 None:intergenic
TGAAGAAGCCTTATAACCTC+AGG 0.481252 8_3:+4662632 None:intergenic
CAAGTTGAGATTCTTGGTCA+TGG 0.484513 8_3:-4662257 Msa1271200:CDS
TGTTGCATTGAAGGAGTAAG+AGG 0.485388 8_3:+4663157 None:intergenic
CATGGAAGGTGATGAAAGCT+TGG 0.494784 8_3:-4662021 Msa1271200:CDS
TGGATTGGTTGTTCCATCAT+GGG 0.505053 8_3:-4662285 Msa1271200:CDS
GTGTTGTTGAAGTAATTGTT+TGG 0.507595 8_3:+4663219 None:intergenic
TGAAAATGGTTCATCTAAGA+AGG 0.509696 8_3:-4661946 Msa1271200:CDS
GGGTTCAACTTTGGAGAGTG+TGG 0.511321 8_3:-4662201 Msa1271200:CDS
CTTGATCTTTCACATAGAAG+TGG 0.528439 8_3:+4662740 None:intergenic
GGAATTAAATGGCTAAGTCC+AGG 0.532715 8_3:+4663256 None:intergenic
TCAACTTGAGGTGCCCATGA+TGG 0.533856 8_3:+4662272 None:intergenic
TGTTTGGCAAATTCAACTTG+TGG 0.534373 8_3:+4663235 None:intergenic
GGAAATACAAAAGAGAATCA+AGG 0.536941 8_3:-4662000 Msa1271200:CDS
TTTCTGTTAAGGGGTCCCAC+TGG 0.538371 8_3:+4662584 None:intergenic
GAATTAAATGGCTAAGTCCA+GGG 0.544089 8_3:+4663257 None:intergenic
GGAGTAAGAGGACCAAGTGT+TGG 0.547872 8_3:+4663169 None:intergenic
AAGAAACAGAGAAAATGGAT+TGG 0.554526 8_3:-4662300 Msa1271200:CDS
GAGTGGCAAGAAATTCTTGT+GGG 0.556381 8_3:-4662414 Msa1271200:CDS
AGAGTGAGACAAAACGATGT+TGG 0.561014 8_3:+4662875 None:intergenic
ACATTCATCATTCCAACACT+TGG 0.561131 8_3:-4663181 Msa1271200:CDS
TTAGACTCATTTCTGTTAAG+GGG 0.563399 8_3:+4662575 None:intergenic
TTAATTCAATGTGTTTAAGG+TGG 0.567516 8_3:-4662538 Msa1271200:CDS
TCTCAACGACTCTATTTCCT+CGG 0.572473 8_3:-4662846 Msa1271200:CDS
ATGCAATCTCGATGCTAAAG+AGG 0.573771 8_3:+4661917 None:intergenic
CGATGTTGGAACAGCTCCTG+AGG 0.581304 8_3:+4662889 None:intergenic
GCATTTGGATTAGAATTGAG+TGG 0.583901 8_3:-4662431 Msa1271200:CDS
CCATTTGGTAAATACTCTAA+CGG 0.585513 8_3:+4662332 None:intergenic
AGAATCAAGGAATTGAGTGT+TGG 0.586449 8_3:-4661987 Msa1271200:CDS
AGAATGAAGTCTATGTTTGG+TGG 0.586802 8_3:+4663118 None:intergenic
ATTATTGACAGATGAGCTCA+AGG 0.593411 8_3:-4662120 Msa1271200:CDS
TTTCAATGATTTGGAACCTG+AGG 0.594195 8_3:-4662648 Msa1271200:CDS
CATACATAAAGAACAGAACC+TGG 0.600021 8_3:+4662500 None:intergenic
GGAAATAGAGTTCTTAGAGT+CGG 0.603460 8_3:-4662825 Msa1271200:CDS
CTCTAAGAACTCTATTTCCG+AGG 0.603837 8_3:+4662829 None:intergenic
GAATATCTTTGATATGGTAA+GGG 0.608277 8_3:+4662768 None:intergenic
TGGTAAGGGACTATACTACC+TGG 0.618036 8_3:+4662782 None:intergenic
GGCCTCTATTTGCAGAACAA+AGG 0.622122 8_3:-4662154 Msa1271200:CDS
CGAAGATTGATGATGAAAGT+GGG 0.623137 8_3:-4662085 Msa1271200:CDS
TACTAAAGATTAAAGAAACA+AGG 0.633815 8_3:+4662975 None:intergenic
GAAGGAACCATAGCAATACA+TGG 0.645022 8_3:+4663280 None:intergenic
TGGTTGGAAAATCAACCACC+AGG 0.649004 8_3:-4662518 Msa1271200:CDS
TAACTGTGTAAGGAGAATCA+TGG 0.649948 8_3:-4662039 Msa1271200:CDS
ATGGTGTTCCTATGATTGCG+TGG 0.650757 8_3:-4662175 Msa1271200:CDS
AAATGGCTAAGTCCAGGGGA+AGG 0.656957 8_3:+4663262 None:intergenic
TGACCAAGAATCTCAACTTG+AGG 0.657242 8_3:+4662260 None:intergenic
TGTGTAAGGAGAATCATGGA+AGG 0.676421 8_3:-4662035 Msa1271200:CDS
TGAGTGGCAAGAAATTCTTG+TGG 0.685840 8_3:-4662415 Msa1271200:CDS
ATGAGCTCAAGGTGGCTGTG+AGG 0.692118 8_3:-4662109 Msa1271200:CDS
AATTAAATGGCTAAGTCCAG+GGG 0.708782 8_3:+4663258 None:intergenic
ATTGACAGATGAGCTCAAGG+TGG 0.752715 8_3:-4662117 Msa1271200:CDS
ACATAAAGAACAGAACCTGG+TGG 0.755413 8_3:+4662503 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTAAAGATTAAAGAAACA+AGG + chr8_3:4662237-4662256 None:intergenic 20.0%
!! ACATTAATTCAATGTGTTTA+AGG - chr8_3:4662668-4662687 Msa1271200:CDS 20.0%
!! TACTAAAGATTAAAGAAACA+AGG + chr8_3:4662237-4662256 None:intergenic 20.0%
!! ACATTAATTCAATGTGTTTA+AGG - chr8_3:4662668-4662687 Msa1271200:CDS 20.0%
! TAAAAAACCATGTATTGCTA+TGG - chr8_3:4661922-4661941 Msa1271200:CDS 25.0%
! ATTCAACTTGTGGAATTAAA+TGG + chr8_3:4661967-4661986 None:intergenic 25.0%
!!! TGTTGAATGTTTTTTACTTG+AGG + chr8_3:4662121-4662140 None:intergenic 25.0%
!!! TAAAGAAACAAGGTTAGTTT+TGG + chr8_3:4662227-4662246 None:intergenic 25.0%
! GAATATCTTTGATATGGTAA+GGG + chr8_3:4662444-4662463 None:intergenic 25.0%
! CATAAACACTTTCAATGATT+TGG - chr8_3:4662552-4662571 Msa1271200:CDS 25.0%
! ATTAGACTCATTTCTGTTAA+GGG + chr8_3:4662638-4662657 None:intergenic 25.0%
! AATTAGACTCATTTCTGTTA+AGG + chr8_3:4662639-4662658 None:intergenic 25.0%
! TTAATTCAATGTGTTTAAGG+TGG - chr8_3:4662671-4662690 Msa1271200:CDS 25.0%
!! TCTGTTCTTTATGTATGTTT+TGG - chr8_3:4662715-4662734 Msa1271200:CDS 25.0%
!! CTGTTCTTTATGTATGTTTT+GGG - chr8_3:4662716-4662735 Msa1271200:CDS 25.0%
! TAAAAAACCATGTATTGCTA+TGG - chr8_3:4661922-4661941 Msa1271200:CDS 25.0%
! ATTCAACTTGTGGAATTAAA+TGG + chr8_3:4661967-4661986 None:intergenic 25.0%
!!! TGTTGAATGTTTTTTACTTG+AGG + chr8_3:4662121-4662140 None:intergenic 25.0%
!!! TAAAGAAACAAGGTTAGTTT+TGG + chr8_3:4662227-4662246 None:intergenic 25.0%
! GAATATCTTTGATATGGTAA+GGG + chr8_3:4662444-4662463 None:intergenic 25.0%
! CATAAACACTTTCAATGATT+TGG - chr8_3:4662552-4662571 Msa1271200:CDS 25.0%
! ATTAGACTCATTTCTGTTAA+GGG + chr8_3:4662638-4662657 None:intergenic 25.0%
! AATTAGACTCATTTCTGTTA+AGG + chr8_3:4662639-4662658 None:intergenic 25.0%
! TTAATTCAATGTGTTTAAGG+TGG - chr8_3:4662671-4662690 Msa1271200:CDS 25.0%
!! TCTGTTCTTTATGTATGTTT+TGG - chr8_3:4662715-4662734 Msa1271200:CDS 25.0%
!! CTGTTCTTTATGTATGTTTT+GGG - chr8_3:4662716-4662735 Msa1271200:CDS 25.0%
! GTGTTGTTGAAGTAATTGTT+TGG + chr8_3:4661993-4662012 None:intergenic 30.0%
AGAAGAATGAAGTCTATGTT+TGG + chr8_3:4662097-4662116 None:intergenic 30.0%
! TTGACTTCTTGTTGTAGAAA+TGG + chr8_3:4662193-4662212 None:intergenic 30.0%
GGAATATCTTTGATATGGTA+AGG + chr8_3:4662445-4662464 None:intergenic 30.0%
GATCAGGAATATCTTTGATA+TGG + chr8_3:4662450-4662469 None:intergenic 30.0%
CAGAAATTCTCATTAGTTGA+TGG - chr8_3:4662523-4662542 Msa1271200:CDS 30.0%
!!! AAACCTTGTTTTTATCCAGT+GGG - chr8_3:4662610-4662629 Msa1271200:CDS 30.0%
TTAGACTCATTTCTGTTAAG+GGG + chr8_3:4662637-4662656 None:intergenic 30.0%
!!! GTTAACTCTGCTTATTTTGT+TGG - chr8_3:4662841-4662860 Msa1271200:CDS 30.0%
CCATTTGGTAAATACTCTAA+CGG + chr8_3:4662880-4662899 None:intergenic 30.0%
GTATTTACCAAATGGTTTCT+TGG - chr8_3:4662885-4662904 Msa1271200:CDS 30.0%
TTTCTTTCCAAGAAACCATT+TGG + chr8_3:4662895-4662914 None:intergenic 30.0%
TTGGAAAGAAACAGAGAAAA+TGG - chr8_3:4662904-4662923 Msa1271200:CDS 30.0%
AAGAAACAGAGAAAATGGAT+TGG - chr8_3:4662909-4662928 Msa1271200:CDS 30.0%
!!! TTTTTTGAGTCATTGTGGTT+GGG - chr8_3:4662987-4663006 Msa1271200:CDS 30.0%
GGAAATACAAAAGAGAATCA+AGG - chr8_3:4663209-4663228 Msa1271200:CDS 30.0%
TGAAAATGGTTCATCTAAGA+AGG - chr8_3:4663263-4663282 Msa1271200:CDS 30.0%
! GTGTTGTTGAAGTAATTGTT+TGG + chr8_3:4661993-4662012 None:intergenic 30.0%
AGAAGAATGAAGTCTATGTT+TGG + chr8_3:4662097-4662116 None:intergenic 30.0%
! TTGACTTCTTGTTGTAGAAA+TGG + chr8_3:4662193-4662212 None:intergenic 30.0%
GGAATATCTTTGATATGGTA+AGG + chr8_3:4662445-4662464 None:intergenic 30.0%
GATCAGGAATATCTTTGATA+TGG + chr8_3:4662450-4662469 None:intergenic 30.0%
CAGAAATTCTCATTAGTTGA+TGG - chr8_3:4662523-4662542 Msa1271200:CDS 30.0%
!!! AAACCTTGTTTTTATCCAGT+GGG - chr8_3:4662610-4662629 Msa1271200:CDS 30.0%
TTAGACTCATTTCTGTTAAG+GGG + chr8_3:4662637-4662656 None:intergenic 30.0%
!!! GTTAACTCTGCTTATTTTGT+TGG - chr8_3:4662841-4662860 Msa1271200:CDS 30.0%
CCATTTGGTAAATACTCTAA+CGG + chr8_3:4662880-4662899 None:intergenic 30.0%
GTATTTACCAAATGGTTTCT+TGG - chr8_3:4662885-4662904 Msa1271200:CDS 30.0%
TTTCTTTCCAAGAAACCATT+TGG + chr8_3:4662895-4662914 None:intergenic 30.0%
TTGGAAAGAAACAGAGAAAA+TGG - chr8_3:4662904-4662923 Msa1271200:CDS 30.0%
AAGAAACAGAGAAAATGGAT+TGG - chr8_3:4662909-4662928 Msa1271200:CDS 30.0%
!!! TTTTTTGAGTCATTGTGGTT+GGG - chr8_3:4662987-4663006 Msa1271200:CDS 30.0%
GGAAATACAAAAGAGAATCA+AGG - chr8_3:4663209-4663228 Msa1271200:CDS 30.0%
TGAAAATGGTTCATCTAAGA+AGG - chr8_3:4663263-4663282 Msa1271200:CDS 30.0%
AATTAAATGGCTAAGTCCAG+GGG + chr8_3:4661954-4661973 None:intergenic 35.0%
GAATTAAATGGCTAAGTCCA+GGG + chr8_3:4661955-4661974 None:intergenic 35.0%
TGTTTGGCAAATTCAACTTG+TGG + chr8_3:4661977-4661996 None:intergenic 35.0%
ACATTCATCATTCCAACACT+TGG - chr8_3:4662028-4662047 Msa1271200:CDS 35.0%
!! TTCAAGACTTGTTGCATTGA+AGG + chr8_3:4662064-4662083 None:intergenic 35.0%
AGAATGAAGTCTATGTTTGG+TGG + chr8_3:4662094-4662113 None:intergenic 35.0%
! TCTTATCTTTTCTATGCCTC+AGG - chr8_3:4662304-4662323 Msa1271200:CDS 35.0%
GAAATAGAGTCGTTGAGAAT+CGG + chr8_3:4662361-4662380 None:intergenic 35.0%
GGAAATAGAGTTCTTAGAGT+CGG - chr8_3:4662384-4662403 Msa1271200:CDS 35.0%
TATGAAACTGTGAATGTTCC+AGG - chr8_3:4662409-4662428 Msa1271200:CDS 35.0%
CTTGATCTTTCACATAGAAG+TGG + chr8_3:4662472-4662491 None:intergenic 35.0%
! TTTCAATGATTTGGAACCTG+AGG - chr8_3:4662561-4662580 Msa1271200:CDS 35.0%
! ATTTGGAACCTGAGGTTATA+AGG - chr8_3:4662569-4662588 Msa1271200:CDS 35.0%
!!! GAAACCTTGTTTTTATCCAG+TGG - chr8_3:4662609-4662628 Msa1271200:CDS 35.0%
! TTCAATGTGTTTAAGGTGGT+TGG - chr8_3:4662675-4662694 Msa1271200:CDS 35.0%
CATACATAAAGAACAGAACC+TGG + chr8_3:4662712-4662731 None:intergenic 35.0%
!!! CTTTATGTATGTTTTGGGAG+TGG - chr8_3:4662721-4662740 Msa1271200:CDS 35.0%
CAACTCAATGAGTTAGCATT+TGG - chr8_3:4662763-4662782 Msa1271200:CDS 35.0%
! GCATTTGGATTAGAATTGAG+TGG - chr8_3:4662778-4662797 Msa1271200:CDS 35.0%
! CCGTTAGAGTATTTACCAAA+TGG - chr8_3:4662877-4662896 Msa1271200:CDS 35.0%
ATTCTTGGTCATGGTTCAAT+TGG - chr8_3:4662961-4662980 Msa1271200:CDS 35.0%
!!! GTTTTTTGAGTCATTGTGGT+TGG - chr8_3:4662986-4663005 Msa1271200:CDS 35.0%
!!! TTTTTGAGTCATTGTGGTTG+GGG - chr8_3:4662988-4663007 Msa1271200:CDS 35.0%
ATCCTTTGTTCTGCAAATAG+AGG + chr8_3:4663060-4663079 None:intergenic 35.0%
ATTATTGACAGATGAGCTCA+AGG - chr8_3:4663089-4663108 Msa1271200:CDS 35.0%
CCACTTTCATCATCAATCTT+CGG + chr8_3:4663126-4663145 None:intergenic 35.0%
!! CGAAGATTGATGATGAAAGT+GGG - chr8_3:4663124-4663143 Msa1271200:CDS 35.0%
AAGAAGTTGCTAACTGTGTA+AGG - chr8_3:4663160-4663179 Msa1271200:CDS 35.0%
TAACTGTGTAAGGAGAATCA+TGG - chr8_3:4663170-4663189 Msa1271200:CDS 35.0%
AGAATCAAGGAATTGAGTGT+TGG - chr8_3:4663222-4663241 Msa1271200:CDS 35.0%
AATTAAATGGCTAAGTCCAG+GGG + chr8_3:4661954-4661973 None:intergenic 35.0%
GAATTAAATGGCTAAGTCCA+GGG + chr8_3:4661955-4661974 None:intergenic 35.0%
TGTTTGGCAAATTCAACTTG+TGG + chr8_3:4661977-4661996 None:intergenic 35.0%
ACATTCATCATTCCAACACT+TGG - chr8_3:4662028-4662047 Msa1271200:CDS 35.0%
!! TTCAAGACTTGTTGCATTGA+AGG + chr8_3:4662064-4662083 None:intergenic 35.0%
AGAATGAAGTCTATGTTTGG+TGG + chr8_3:4662094-4662113 None:intergenic 35.0%
! TCTTATCTTTTCTATGCCTC+AGG - chr8_3:4662304-4662323 Msa1271200:CDS 35.0%
GAAATAGAGTCGTTGAGAAT+CGG + chr8_3:4662361-4662380 None:intergenic 35.0%
GGAAATAGAGTTCTTAGAGT+CGG - chr8_3:4662384-4662403 Msa1271200:CDS 35.0%
TATGAAACTGTGAATGTTCC+AGG - chr8_3:4662409-4662428 Msa1271200:CDS 35.0%
CTTGATCTTTCACATAGAAG+TGG + chr8_3:4662472-4662491 None:intergenic 35.0%
! TTTCAATGATTTGGAACCTG+AGG - chr8_3:4662561-4662580 Msa1271200:CDS 35.0%
! ATTTGGAACCTGAGGTTATA+AGG - chr8_3:4662569-4662588 Msa1271200:CDS 35.0%
!!! GAAACCTTGTTTTTATCCAG+TGG - chr8_3:4662609-4662628 Msa1271200:CDS 35.0%
! TTCAATGTGTTTAAGGTGGT+TGG - chr8_3:4662675-4662694 Msa1271200:CDS 35.0%
CATACATAAAGAACAGAACC+TGG + chr8_3:4662712-4662731 None:intergenic 35.0%
!!! CTTTATGTATGTTTTGGGAG+TGG - chr8_3:4662721-4662740 Msa1271200:CDS 35.0%
CAACTCAATGAGTTAGCATT+TGG - chr8_3:4662763-4662782 Msa1271200:CDS 35.0%
! GCATTTGGATTAGAATTGAG+TGG - chr8_3:4662778-4662797 Msa1271200:CDS 35.0%
! CCGTTAGAGTATTTACCAAA+TGG - chr8_3:4662877-4662896 Msa1271200:CDS 35.0%
ATTCTTGGTCATGGTTCAAT+TGG - chr8_3:4662961-4662980 Msa1271200:CDS 35.0%
!!! GTTTTTTGAGTCATTGTGGT+TGG - chr8_3:4662986-4663005 Msa1271200:CDS 35.0%
!!! TTTTTGAGTCATTGTGGTTG+GGG - chr8_3:4662988-4663007 Msa1271200:CDS 35.0%
ATCCTTTGTTCTGCAAATAG+AGG + chr8_3:4663060-4663079 None:intergenic 35.0%
ATTATTGACAGATGAGCTCA+AGG - chr8_3:4663089-4663108 Msa1271200:CDS 35.0%
CCACTTTCATCATCAATCTT+CGG + chr8_3:4663126-4663145 None:intergenic 35.0%
!! CGAAGATTGATGATGAAAGT+GGG - chr8_3:4663124-4663143 Msa1271200:CDS 35.0%
AAGAAGTTGCTAACTGTGTA+AGG - chr8_3:4663160-4663179 Msa1271200:CDS 35.0%
TAACTGTGTAAGGAGAATCA+TGG - chr8_3:4663170-4663189 Msa1271200:CDS 35.0%
AGAATCAAGGAATTGAGTGT+TGG - chr8_3:4663222-4663241 Msa1271200:CDS 35.0%
GAAGGAACCATAGCAATACA+TGG + chr8_3:4661932-4661951 None:intergenic 40.0%
GGAATTAAATGGCTAAGTCC+AGG + chr8_3:4661956-4661975 None:intergenic 40.0%
TGTTGCATTGAAGGAGTAAG+AGG + chr8_3:4662055-4662074 None:intergenic 40.0%
ATGAGTTTCATTTGTGCTGC+TGG + chr8_3:4662154-4662173 None:intergenic 40.0%
AGAGTGAGACAAAACGATGT+TGG + chr8_3:4662337-4662356 None:intergenic 40.0%
TCTCAACGACTCTATTTCCT+CGG - chr8_3:4662363-4662382 Msa1271200:CDS 40.0%
! CTCTAAGAACTCTATTTCCG+AGG + chr8_3:4662383-4662402 None:intergenic 40.0%
CTTTCACATAGAAGTGGATC+AGG + chr8_3:4662466-4662485 None:intergenic 40.0%
! TGAAGAAGCCTTATAACCTC+AGG + chr8_3:4662580-4662599 None:intergenic 40.0%
ACATAAAGAACAGAACCTGG+TGG + chr8_3:4662709-4662728 None:intergenic 40.0%
!!! TATGTATGTTTTGGGAGTGG+TGG - chr8_3:4662724-4662743 Msa1271200:CDS 40.0%
TGAGTGGCAAGAAATTCTTG+TGG - chr8_3:4662794-4662813 Msa1271200:CDS 40.0%
GAGTGGCAAGAAATTCTTGT+GGG - chr8_3:4662795-4662814 Msa1271200:CDS 40.0%
GCAGAGTTAACAGCTTTACT+TGG + chr8_3:4662832-4662851 None:intergenic 40.0%
!! ATGGATTGGTTGTTCCATCA+TGG - chr8_3:4662923-4662942 Msa1271200:CDS 40.0%
!! TGGATTGGTTGTTCCATCAT+GGG - chr8_3:4662924-4662943 Msa1271200:CDS 40.0%
TGACCAAGAATCTCAACTTG+AGG + chr8_3:4662952-4662971 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG - chr8_3:4662952-4662971 Msa1271200:CDS 40.0%
!!! GGTGGTTTTTTGAGTCATTG+TGG - chr8_3:4662982-4663001 Msa1271200:CDS 40.0%
! ACTTTGGAGAGTGTGGTTAA+TGG - chr8_3:4663015-4663034 Msa1271200:CDS 40.0%
!! CCGAAGATTGATGATGAAAG+TGG - chr8_3:4663123-4663142 Msa1271200:CDS 40.0%
TGTGTAAGGAGAATCATGGA+AGG - chr8_3:4663174-4663193 Msa1271200:CDS 40.0%
GCTGTTGCAACAAGTGAAAA+TGG - chr8_3:4663249-4663268 Msa1271200:CDS 40.0%
ATGCAATCTCGATGCTAAAG+AGG + chr8_3:4663295-4663314 None:intergenic 40.0%
GAAGGAACCATAGCAATACA+TGG + chr8_3:4661932-4661951 None:intergenic 40.0%
GGAATTAAATGGCTAAGTCC+AGG + chr8_3:4661956-4661975 None:intergenic 40.0%
TGTTGCATTGAAGGAGTAAG+AGG + chr8_3:4662055-4662074 None:intergenic 40.0%
ATGAGTTTCATTTGTGCTGC+TGG + chr8_3:4662154-4662173 None:intergenic 40.0%
AGAGTGAGACAAAACGATGT+TGG + chr8_3:4662337-4662356 None:intergenic 40.0%
TCTCAACGACTCTATTTCCT+CGG - chr8_3:4662363-4662382 Msa1271200:CDS 40.0%
! CTCTAAGAACTCTATTTCCG+AGG + chr8_3:4662383-4662402 None:intergenic 40.0%
CTTTCACATAGAAGTGGATC+AGG + chr8_3:4662466-4662485 None:intergenic 40.0%
! TGAAGAAGCCTTATAACCTC+AGG + chr8_3:4662580-4662599 None:intergenic 40.0%
ACATAAAGAACAGAACCTGG+TGG + chr8_3:4662709-4662728 None:intergenic 40.0%
!!! TATGTATGTTTTGGGAGTGG+TGG - chr8_3:4662724-4662743 Msa1271200:CDS 40.0%
TGAGTGGCAAGAAATTCTTG+TGG - chr8_3:4662794-4662813 Msa1271200:CDS 40.0%
GAGTGGCAAGAAATTCTTGT+GGG - chr8_3:4662795-4662814 Msa1271200:CDS 40.0%
GCAGAGTTAACAGCTTTACT+TGG + chr8_3:4662832-4662851 None:intergenic 40.0%
!! ATGGATTGGTTGTTCCATCA+TGG - chr8_3:4662923-4662942 Msa1271200:CDS 40.0%
!! TGGATTGGTTGTTCCATCAT+GGG - chr8_3:4662924-4662943 Msa1271200:CDS 40.0%
TGACCAAGAATCTCAACTTG+AGG + chr8_3:4662952-4662971 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG - chr8_3:4662952-4662971 Msa1271200:CDS 40.0%
!!! GGTGGTTTTTTGAGTCATTG+TGG - chr8_3:4662982-4663001 Msa1271200:CDS 40.0%
! ACTTTGGAGAGTGTGGTTAA+TGG - chr8_3:4663015-4663034 Msa1271200:CDS 40.0%
!! CCGAAGATTGATGATGAAAG+TGG - chr8_3:4663123-4663142 Msa1271200:CDS 40.0%
TGTGTAAGGAGAATCATGGA+AGG - chr8_3:4663174-4663193 Msa1271200:CDS 40.0%
GCTGTTGCAACAAGTGAAAA+TGG - chr8_3:4663249-4663268 Msa1271200:CDS 40.0%
ATGCAATCTCGATGCTAAAG+AGG + chr8_3:4663295-4663314 None:intergenic 40.0%
! TCATTTGTGCTGCTGGATCA+TGG + chr8_3:4662147-4662166 None:intergenic 45.0%
TGGTAAGGGACTATACTACC+TGG + chr8_3:4662430-4662449 None:intergenic 45.0%
GGTCCCACTGGATAAAAACA+AGG + chr8_3:4662616-4662635 None:intergenic 45.0%
TGGTTGGAAAATCAACCACC+AGG - chr8_3:4662691-4662710 Msa1271200:CDS 45.0%
!! GCACCTCAAGTTGAGATTCT+TGG - chr8_3:4662946-4662965 Msa1271200:CDS 45.0%
CTTGGTCATGGTTCAATTGG+TGG - chr8_3:4662964-4662983 Msa1271200:CDS 45.0%
TTGTGGTTGGGGTTCAACTT+TGG - chr8_3:4662999-4663018 Msa1271200:CDS 45.0%
ATGGTGTTCCTATGATTGCG+TGG - chr8_3:4663034-4663053 Msa1271200:CDS 45.0%
AATAGAGGCCACGCAATCAT+AGG + chr8_3:4663045-4663064 None:intergenic 45.0%
GGCCTCTATTTGCAGAACAA+AGG - chr8_3:4663055-4663074 Msa1271200:CDS 45.0%
ATTGACAGATGAGCTCAAGG+TGG - chr8_3:4663092-4663111 Msa1271200:CDS 45.0%
CATGGAAGGTGATGAAAGCT+TGG - chr8_3:4663188-4663207 Msa1271200:CDS 45.0%
! TCATTTGTGCTGCTGGATCA+TGG + chr8_3:4662147-4662166 None:intergenic 45.0%
TGGTAAGGGACTATACTACC+TGG + chr8_3:4662430-4662449 None:intergenic 45.0%
GGTCCCACTGGATAAAAACA+AGG + chr8_3:4662616-4662635 None:intergenic 45.0%
TGGTTGGAAAATCAACCACC+AGG - chr8_3:4662691-4662710 Msa1271200:CDS 45.0%
!! GCACCTCAAGTTGAGATTCT+TGG - chr8_3:4662946-4662965 Msa1271200:CDS 45.0%
CTTGGTCATGGTTCAATTGG+TGG - chr8_3:4662964-4662983 Msa1271200:CDS 45.0%
TTGTGGTTGGGGTTCAACTT+TGG - chr8_3:4662999-4663018 Msa1271200:CDS 45.0%
ATGGTGTTCCTATGATTGCG+TGG - chr8_3:4663034-4663053 Msa1271200:CDS 45.0%
AATAGAGGCCACGCAATCAT+AGG + chr8_3:4663045-4663064 None:intergenic 45.0%
GGCCTCTATTTGCAGAACAA+AGG - chr8_3:4663055-4663074 Msa1271200:CDS 45.0%
ATTGACAGATGAGCTCAAGG+TGG - chr8_3:4663092-4663111 Msa1271200:CDS 45.0%
CATGGAAGGTGATGAAAGCT+TGG - chr8_3:4663188-4663207 Msa1271200:CDS 45.0%
ATTGCTATGGTTCCTTCCCC+TGG - chr8_3:4661935-4661954 Msa1271200:CDS 50.0%
AAATGGCTAAGTCCAGGGGA+AGG + chr8_3:4661950-4661969 None:intergenic 50.0%
GGAGTAAGAGGACCAAGTGT+TGG + chr8_3:4662043-4662062 None:intergenic 50.0%
TTTCTGTTAAGGGGTCCCAC+TGG + chr8_3:4662628-4662647 None:intergenic 50.0%
! TCAACTTGAGGTGCCCATGA+TGG + chr8_3:4662940-4662959 None:intergenic 50.0%
! GGGTTCAACTTTGGAGAGTG+TGG - chr8_3:4663008-4663027 Msa1271200:CDS 50.0%
ATTGCTATGGTTCCTTCCCC+TGG - chr8_3:4661935-4661954 Msa1271200:CDS 50.0%
AAATGGCTAAGTCCAGGGGA+AGG + chr8_3:4661950-4661969 None:intergenic 50.0%
GGAGTAAGAGGACCAAGTGT+TGG + chr8_3:4662043-4662062 None:intergenic 50.0%
TTTCTGTTAAGGGGTCCCAC+TGG + chr8_3:4662628-4662647 None:intergenic 50.0%
! TCAACTTGAGGTGCCCATGA+TGG + chr8_3:4662940-4662959 None:intergenic 50.0%
! GGGTTCAACTTTGGAGAGTG+TGG - chr8_3:4663008-4663027 Msa1271200:CDS 50.0%
CGATGTTGGAACAGCTCCTG+AGG + chr8_3:4662323-4662342 None:intergenic 55.0%
ATGAGCTCAAGGTGGCTGTG+AGG - chr8_3:4663100-4663119 Msa1271200:CDS 55.0%
CGATGTTGGAACAGCTCCTG+AGG + chr8_3:4662323-4662342 None:intergenic 55.0%
ATGAGCTCAAGGTGGCTGTG+AGG - chr8_3:4663100-4663119 Msa1271200:CDS 55.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 4661908 4663323 4661908 ID=Msa1271200;Name=Msa1271200
chr8_3 mRNA 4661908 4663323 4661908 ID=Msa1271200-mRNA-1;Parent=Msa1271200;Name=Msa1271200-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|471
chr8_3 exon 4661908 4663323 4661908 ID=Msa1271200-mRNA-1:exon:1609;Parent=Msa1271200-mRNA-1
chr8_3 CDS 4661908 4663323 4661908 ID=Msa1271200-mRNA-1:cds;Parent=Msa1271200-mRNA-1
Gene Sequence

>Msa1271200

ATGCACATGATGAATAAAAAACCATGTATTGCTATGGTTCCTTCCCCTGGACTTAGCCATTTAATTCCACAAGTTGAATTTGCCAAACAATTACTTCAACAACACAATGAATTCATTGTCACATTCATCATTCCAACACTTGGTCCTCTTACTCCTTCAATGCAACAAGTCTTGAACAATCTTCCACCAAACATAGACTTCATTCTTCTTCCTCAAGTAAAAAACATTCAACAAAGCCATGATCCAGCAGCACAAATGAAACTCATTGTGAAACATTCTATTCCATTTCTACAACAAGAAGTCAAATCACTCATTTCCAAAACTAACCTTGTTTCTTTAATCTTTAGTATATTTTCAACAGATGCATATGAAGTTGCTAAACAGTTCAACTTGTCTTCTTATCTTTTCTATGCCTCAGGAGCTGTTCCAACATCGTTTTGTCTCACTCTTCCGATTCTCAACGACTCTATTTCCTCGGAAATAGAGTTCTTAGAGTCGGCTTATGAAACTGTGAATGTTCCAGGTAGTATAGTCCCTTACCATATCAAAGATATTCCTGATCCACTTCTATGTGAAAGATCAAGTTTAGAGTACAAATCATTTCTTGATGTATGTCAGAAATTCTCATTAGTTGATGGTCTTATCATAAACACTTTCAATGATTTGGAACCTGAGGTTATAAGGCTTCTTCAAGAAAAAAAGAAACCTTGTTTTTATCCAGTGGGACCCCTTAACAGAAATGAGTCTAATTGTGAAGATAACATTAATTCAATGTGTTTAAGGTGGTTGGAAAATCAACCACCAGGTTCTGTTCTTTATGTATGTTTTGGGAGTGGTGGAACAGTTTCTCATGAACAACTCAATGAGTTAGCATTTGGATTAGAATTGAGTGGCAAGAAATTCTTGTGGGTTGTGAGAGTTCCAAGTAAAGCTGTTAACTCTGCTTATTTTGTTGGAGCAAAAGATGATCCGTTAGAGTATTTACCAAATGGTTTCTTGGAAAGAAACAGAGAAAATGGATTGGTTGTTCCATCATGGGCACCTCAAGTTGAGATTCTTGGTCATGGTTCAATTGGTGGTTTTTTGAGTCATTGTGGTTGGGGTTCAACTTTGGAGAGTGTGGTTAATGGTGTTCCTATGATTGCGTGGCCTCTATTTGCAGAACAAAGGATGAATGCAAAATTATTGACAGATGAGCTCAAGGTGGCTGTGAGGCCGAAGATTGATGATGAAAGTGGGATAGTGAAAAGAGAAGAAGTTGCTAACTGTGTAAGGAGAATCATGGAAGGTGATGAAAGCTTGGAAATACAAAAGAGAATCAAGGAATTGAGTGTTGGTGCTGCTGTTGCAACAAGTGAAAATGGTTCATCTAAGAAGGCGCTCTCCTCTTTAGCATCGAGATTGCATAACTTTTGA

Protein sequence

>Msa1271200

MHMMNKKPCIAMVPSPGLSHLIPQVEFAKQLLQQHNEFIVTFIIPTLGPLTPSMQQVLNNLPPNIDFILLPQVKNIQQSHDPAAQMKLIVKHSIPFLQQEVKSLISKTNLVSLIFSIFSTDAYEVAKQFNLSSYLFYASGAVPTSFCLTLPILNDSISSEIEFLESAYETVNVPGSIVPYHIKDIPDPLLCERSSLEYKSFLDVCQKFSLVDGLIINTFNDLEPEVIRLLQEKKKPCFYPVGPLNRNESNCEDNINSMCLRWLENQPPGSVLYVCFGSGGTVSHEQLNELAFGLELSGKKFLWVVRVPSKAVNSAYFVGAKDDPLEYLPNGFLERNRENGLVVPSWAPQVEILGHGSIGGFLSHCGWGSTLESVVNGVPMIAWPLFAEQRMNAKLLTDELKVAVRPKIDDESGIVKREEVANCVRRIMEGDESLEIQKRIKELSVGAAVATSENGSSKKALSSLASRLHNF*