Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573580 | XP_003630667.2 | 99.550 | 222 | 1 | 0 | 1 | 222 | 1 | 222 | 1.99e-156 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573580 | sp|O82197|VP321_ARATH | 77.027 | 222 | 38 | 7 | 5 | 222 | 1 | 213 | 6.36e-97 | 284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573580 | G7LJN0 | 99.550 | 222 | 1 | 0 | 1 | 222 | 1 | 222 | 9.50e-157 | 442 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0038020 | Msa0573580 | 0.830461 | 2.899382e-55 | -8.615850e-47 |
| Msa0045550 | Msa0573580 | 0.816326 | 5.858986e-52 | -8.615850e-47 |
| Msa0085720 | Msa0573580 | 0.827059 | 1.927955e-54 | -8.615850e-47 |
| Msa0090390 | Msa0573580 | 0.808155 | 3.557844e-50 | -8.615850e-47 |
| Msa0137870 | Msa0573580 | 0.804728 | 1.879005e-49 | -8.615850e-47 |
| Msa0169820 | Msa0573580 | 0.809549 | 1.791401e-50 | -8.615850e-47 |
| Msa0175050 | Msa0573580 | 0.812764 | 3.597011e-51 | -8.615850e-47 |
| Msa0178510 | Msa0573580 | 0.806567 | 7.725599e-50 | -8.615850e-47 |
| Msa0187490 | Msa0573580 | 0.810728 | 9.979999e-51 | -8.615850e-47 |
| Msa0187830 | Msa0573580 | 0.804997 | 1.651108e-49 | -8.615850e-47 |
| Msa0193540 | Msa0573580 | 0.813399 | 2.610777e-51 | -8.615850e-47 |
| Msa0235470 | Msa0573580 | 0.810557 | 1.086264e-50 | -8.615850e-47 |
| Msa0235880 | Msa0573580 | 0.800974 | 1.120225e-48 | -8.615850e-47 |
| Msa0429090 | Msa0573580 | 0.817996 | 2.467958e-52 | -8.615850e-47 |
| Msa0482180 | Msa0573580 | 0.829750 | 4.321471e-55 | -8.615850e-47 |
| Msa0274630 | Msa0573580 | 0.815194 | 1.047668e-51 | -8.615850e-47 |
| Msa0314060 | Msa0573580 | 0.801773 | 7.687276e-49 | -8.615850e-47 |
| Msa0341230 | Msa0573580 | 0.802060 | 6.710886e-49 | -8.615850e-47 |
| Msa0545290 | Msa0573580 | 0.806743 | 7.091288e-50 | -8.615850e-47 |
| Msa0573580 | Msa0587190 | 0.802042 | 6.768251e-49 | -8.615850e-47 |
| Msa0573580 | Msa0600890 | 0.812940 | 3.291660e-51 | -8.615850e-47 |
| Msa0573580 | Msa0626990 | 0.800485 | 1.409965e-48 | -8.615850e-47 |
| Msa0573580 | Msa0627350 | 0.801179 | 1.017284e-48 | -8.615850e-47 |
| Msa0573580 | Msa0641340 | 0.816236 | 6.137239e-52 | -8.615850e-47 |
| Msa0573580 | Msa0679550 | 0.809037 | 2.306152e-50 | -8.615850e-47 |
| Msa0573580 | Msa0679810 | 0.808060 | 3.728584e-50 | -8.615850e-47 |
| Msa0573580 | Msa0689780 | 0.806090 | 9.736301e-50 | -8.615850e-47 |
| Msa0573580 | Msa0698440 | 0.811597 | 6.466924e-51 | -8.615850e-47 |
| Msa0573580 | Msa0721340 | 0.810430 | 1.157062e-50 | -8.615850e-47 |
| Msa0573580 | Msa0809140 | 0.852712 | 3.854984e-61 | -8.615850e-47 |
| Msa0573580 | Msa0945120 | 0.803899 | 2.796827e-49 | -8.615850e-47 |
| Msa0573580 | Msa0970480 | 0.842533 | 2.439327e-58 | -8.615850e-47 |
| Msa0573580 | Msa0980020 | 0.806670 | 7.350420e-50 | -8.615850e-47 |
| Msa0573580 | Msa1042660 | 0.803442 | 3.480010e-49 | -8.615850e-47 |
| Msa0573580 | Msa1063420 | 0.812749 | 3.625057e-51 | -8.615850e-47 |
| Msa0573580 | Msa1098270 | 0.819905 | 9.085800e-53 | -8.615850e-47 |
| Msa0573580 | Msa1130530 | 0.804387 | 2.213210e-49 | -8.615850e-47 |
| Msa0573580 | Msa1164020 | 0.802842 | 4.630305e-49 | -8.615850e-47 |
| Msa0573580 | Msa1177780 | 0.835428 | 1.687771e-56 | -8.615850e-47 |
| Msa0573580 | Msa1229610 | 0.812719 | 3.680631e-51 | -8.615850e-47 |
| Msa0573580 | Msa1258370 | 0.812831 | 3.478417e-51 | -8.615850e-47 |
| Msa0573580 | Msa1270660 | 0.823127 | 1.637066e-53 | -8.615850e-47 |
| Msa0573580 | Msa1270730 | 0.818896 | 1.543235e-52 | -8.615850e-47 |
| Msa0573580 | Msa1272320 | 0.803935 | 2.748634e-49 | -8.615850e-47 |
| Msa0573580 | Msa1332050 | 0.819578 | 1.079052e-52 | -8.615850e-47 |
| Msa0573580 | Msa1335230 | 0.810377 | 1.188152e-50 | -8.615850e-47 |
| Msa0573580 | Msa1341490 | 0.803148 | 4.002632e-49 | -8.615850e-47 |
| Msa0573580 | Msa1359920 | 0.816351 | 5.783457e-52 | -8.615850e-47 |
| Msa0573580 | Msa1372150 | 0.807220 | 5.621675e-50 | -8.615850e-47 |
| Msa0573580 | Msa1376930 | 0.810034 | 1.408983e-50 | -8.615850e-47 |
| Msa0573580 | Msa1420270 | 0.809583 | 1.761080e-50 | -8.615850e-47 |
| Msa0573580 | Msa1423820 | 0.801219 | 9.981109e-49 | -8.615850e-47 |
| Msa0573580 | Msa1426570 | 0.818959 | 1.492634e-52 | -8.615850e-47 |
| Msa0573580 | Msa1444260 | 0.828705 | 7.749079e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573580 | MtrunA17_Chr8g0389481 | 99.550 | 222 | 1 | 0 | 1 | 222 | 1 | 222 | 1.83e-160 | 442 |
| Msa0573580 | MtrunA17_Chr6g0487521 | 81.364 | 220 | 39 | 2 | 5 | 222 | 1 | 220 | 8.43e-106 | 304 |
| Msa0573580 | MtrunA17_Chr8g0389471 | 74.554 | 224 | 52 | 4 | 1 | 222 | 1 | 221 | 4.13e-89 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573580 | AT2G19830.2 | 77.027 | 222 | 38 | 7 | 5 | 222 | 1 | 213 | 6.47e-98 | 284 |
| Msa0573580 | AT4G29160.1 | 77.828 | 221 | 44 | 4 | 5 | 222 | 1 | 219 | 8.00e-93 | 271 |
| Msa0573580 | AT4G29160.3 | 77.828 | 221 | 44 | 4 | 5 | 222 | 1 | 219 | 8.00e-93 | 271 |
| Msa0573580 | AT2G19830.1 | 79.293 | 198 | 31 | 5 | 28 | 222 | 4 | 194 | 6.74e-90 | 263 |
| Msa0573580 | AT4G29160.2 | 80.000 | 180 | 33 | 3 | 46 | 222 | 13 | 192 | 9.81e-83 | 244 |
Find 109 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCAATCAACGGTCGAATT+TGG | 0.096103 | 4_1:+76794663 | None:intergenic |
| CATCCCTAACCGGGCGGTTT+TGG | 0.111248 | 4_1:-76794733 | Msa0573580:intron |
| ATAGTTGGTTCTCTGATATT+AGG | 0.162813 | 4_1:-76795334 | Msa0573580:three_prime_UTR |
| ACGAACCCTGGTGAGAAATT+AGG | 0.197502 | 4_1:+76799348 | None:intergenic |
| TCACAAGAGCCAAGAATAAA+AGG | 0.227877 | 4_1:-76798730 | Msa0573580:CDS |
| GTCGAATTTGGGTCTCAATT+TGG | 0.246596 | 4_1:+76794675 | None:intergenic |
| CGGGTGGGTTGGATCGGTTA+TGG | 0.293007 | 4_1:-76794602 | Msa0573580:three_prime_UTR |
| ACTTGGAATGCTAGAGAAAA+AGG | 0.296376 | 4_1:-76798804 | Msa0573580:CDS |
| GGAGAGCGTGCTTCTTAAAA+AGG | 0.301195 | 4_1:-76798783 | Msa0573580:CDS |
| GGGACATGCACAGAGGCTTC+TGG | 0.308869 | 4_1:+76795963 | None:intergenic |
| GGATTCTGTTGCAGGGAGAC+TGG | 0.311823 | 4_1:-76799273 | Msa0573580:intron |
| TCCAATCAACGGTCGAATTT+GGG | 0.312130 | 4_1:+76794664 | None:intergenic |
| CGAACCCTGGTGAGAAATTA+GGG | 0.313711 | 4_1:+76799349 | None:intergenic |
| TAGTTGGTTCTCTGATATTA+GGG | 0.329645 | 4_1:-76795333 | Msa0573580:three_prime_UTR |
| GATTTGTCCGTCGGTTTGTC+CGG | 0.349061 | 4_1:-76794622 | Msa0573580:three_prime_UTR |
| GGGTGGGTTGGATCGGTTAT+GGG | 0.351150 | 4_1:-76794601 | Msa0573580:three_prime_UTR |
| ACCGTTGATTGGATCGGTTT+TGG | 0.354229 | 4_1:-76794654 | Msa0573580:three_prime_UTR |
| TGAGAACATGAAACAGATTC+AGG | 0.382236 | 4_1:-76796241 | Msa0573580:CDS |
| AAATTAGGGTTTGGAATAAG+AGG | 0.383107 | 4_1:+76799363 | None:intergenic |
| ACCCAAATTCGACCGTTGAT+TGG | 0.385633 | 4_1:-76794665 | Msa0573580:three_prime_UTR |
| TGTGGGCCGCGCTTAGTAGA+AGG | 0.389765 | 4_1:-76799530 | Msa0573580:five_prime_UTR |
| GGGTGCTTGCTTCTTCTCTC+TGG | 0.390371 | 4_1:-76794470 | Msa0573580:three_prime_UTR |
| GCCCACTCCTGAGGAAGAAT+TGG | 0.390463 | 4_1:-76795907 | Msa0573580:CDS |
| GCTTCTGGAGTTGTAATTGC+AGG | 0.391518 | 4_1:+76795978 | None:intergenic |
| GGGTCTCAATTTGGTGCCTT+CGG | 0.392405 | 4_1:+76794684 | None:intergenic |
| GGACGAGTAGGCCGCCTAGC+TGG | 0.394730 | 4_1:+76795942 | None:intergenic |
| TACGGGGCATACATAAGAAT+TGG | 0.406525 | 4_1:-76795562 | Msa0573580:three_prime_UTR |
| TACTGTTTCTGTGGTTGCCT+TGG | 0.415099 | 4_1:+76796671 | None:intergenic |
| CCAGTTGCGTATTCATGATC+AGG | 0.417336 | 4_1:-76797902 | Msa0573580:intron |
| AGCTAGGCGGCCTACTCGTC+CGG | 0.432309 | 4_1:-76795940 | Msa0573580:CDS |
| GCTGAGATGGCGCTTTGAGC+AGG | 0.432581 | 4_1:-76795873 | Msa0573580:intron |
| CCAAACCCTAATTTCTCACC+AGG | 0.441030 | 4_1:-76799354 | Msa0573580:five_prime_UTR |
| GAATTATTGTCCGCTCCAAT+TGG | 0.445452 | 4_1:-76796219 | Msa0573580:CDS |
| TTCTAAAGTTGATAGAGTAT+TGG | 0.445759 | 4_1:+76799172 | None:intergenic |
| CACAAGAGCCAAGAATAAAA+GGG | 0.447210 | 4_1:-76798729 | Msa0573580:CDS |
| AAATCAGCAGCTGCACCAAT+TGG | 0.448641 | 4_1:+76796204 | None:intergenic |
| CCTGGTGAGAAATTAGGGTT+TGG | 0.450323 | 4_1:+76799354 | None:intergenic |
| GGCAGCTTTGCAAGCTGAGA+TGG | 0.454546 | 4_1:-76795886 | Msa0573580:CDS |
| CTGATATTAGGGTTGAGCAC+CGG | 0.455414 | 4_1:-76795322 | Msa0573580:three_prime_UTR |
| GTCGGTTTGTCCGGGTGGGT+TGG | 0.459881 | 4_1:-76794613 | Msa0573580:three_prime_UTR |
| ACAGTAGCCGCATTGAGAAC+TGG | 0.461367 | 4_1:-76796654 | Msa0573580:CDS |
| ATTTGTCCGTCGGTTTGTCC+GGG | 0.463081 | 4_1:-76794621 | Msa0573580:three_prime_UTR |
| TTTGTCCGGGTGGGTTGGAT+CGG | 0.464101 | 4_1:-76794608 | Msa0573580:three_prime_UTR |
| TGGTTAGGTCAGAATTTAGC+AGG | 0.466064 | 4_1:-76795603 | Msa0573580:intron |
| AGAGCTAGAGGGTGCTGAGT+TGG | 0.470621 | 4_1:-76796018 | Msa0573580:CDS |
| GCCAATTCTTCCTCAGGAGT+GGG | 0.471301 | 4_1:+76795906 | None:intergenic |
| AAAGCTGCCAATTCTTCCTC+AGG | 0.474769 | 4_1:+76795900 | None:intergenic |
| TGATATTAGGGTTGAGCACC+GGG | 0.478950 | 4_1:-76795321 | Msa0573580:intron |
| GGCTGCAGCTGAAGTTGAAA+GGG | 0.480403 | 4_1:-76798762 | Msa0573580:CDS |
| GATTCTGTTGCAGGGAGACT+GGG | 0.481277 | 4_1:-76799272 | Msa0573580:intron |
| AACGTTGCGAGTAGCATAGT+TGG | 0.484038 | 4_1:-76795349 | Msa0573580:three_prime_UTR |
| CGGCGATACAATGTTTGAAA+AGG | 0.488220 | 4_1:-76797966 | Msa0573580:CDS |
| CCTGATCATGAATACGCAAC+TGG | 0.506321 | 4_1:+76797902 | None:intergenic |
| AGGCTGCAGCTGAAGTTGAA+AGG | 0.506350 | 4_1:-76798763 | Msa0573580:CDS |
| GTCCGTCGGTTTGTCCGGGT+GGG | 0.510526 | 4_1:-76794617 | Msa0573580:three_prime_UTR |
| GACGAGTAGGCCGCCTAGCT+GGG | 0.521270 | 4_1:+76795943 | None:intergenic |
| TACAATGTTTGAAAAGGAAG+AGG | 0.525703 | 4_1:-76797960 | Msa0573580:CDS |
| AGTAGAGAAATAGAAAGAAG+AGG | 0.526767 | 4_1:-76794558 | Msa0573580:three_prime_UTR |
| AAATAAGAGAAAGCTTCTCT+CGG | 0.531320 | 4_1:-76794519 | Msa0573580:three_prime_UTR |
| ATTGATGATGAGAATGATAC+GGG | 0.531507 | 4_1:-76795579 | Msa0573580:three_prime_UTR |
| CAGGTTTCGGATTTGTCCGT+CGG | 0.533242 | 4_1:-76794631 | Msa0573580:three_prime_UTR |
| TGTCCGTCGGTTTGTCCGGG+TGG | 0.535513 | 4_1:-76794618 | Msa0573580:three_prime_UTR |
| GTGGGCCGCGCTTAGTAGAA+GGG | 0.538800 | 4_1:-76799529 | Msa0573580:five_prime_UTR |
| CATTGATGATGAGAATGATA+CGG | 0.539696 | 4_1:-76795580 | Msa0573580:three_prime_UTR |
| AATAAGAGAAAGCTTCTCTC+GGG | 0.539929 | 4_1:-76794518 | Msa0573580:three_prime_UTR |
| CCTCTGTGCATGTCCCAGCT+AGG | 0.540963 | 4_1:-76795956 | Msa0573580:CDS |
| AAGATAAAAGCGACTGTGAG+AGG | 0.541206 | 4_1:+76795516 | None:intergenic |
| GCGTGCAAGTGCAAATGCGA+TGG | 0.547146 | 4_1:+76799445 | None:intergenic |
| GGCAGAATTCTCCATGTCAC+TGG | 0.548290 | 4_1:+76795537 | None:intergenic |
| CTGTTCGTTAATCTCATCCA+TGG | 0.550173 | 4_1:+76796266 | None:intergenic |
| TGCCAATTCTTCCTCAGGAG+TGG | 0.551831 | 4_1:+76795905 | None:intergenic |
| AACCCACCCGGACAAACCGA+CGG | 0.558273 | 4_1:+76794615 | None:intergenic |
| TTTGTATGCACCGGACGAGT+AGG | 0.560328 | 4_1:+76795930 | None:intergenic |
| AATTCGACCGTTGATTGGAT+CGG | 0.564339 | 4_1:-76794660 | Msa0573580:three_prime_UTR |
| GCTTGAATTATGTAGACACT+TGG | 0.569639 | 4_1:-76798821 | Msa0573580:intron |
| TGTGTTACAGATGATAATGC+TGG | 0.571958 | 4_1:-76796700 | Msa0573580:intron |
| GAAAGAAGAGGTGAATGACT+TGG | 0.574360 | 4_1:-76794546 | Msa0573580:three_prime_UTR |
| CAATGCGGCTACTGTTTCTG+TGG | 0.580774 | 4_1:+76796662 | None:intergenic |
| ATCTACCAAGGTGACATCAA+AGG | 0.582493 | 4_1:+76795434 | None:intergenic |
| AGCAGAACTTGAAGAGCTAG+AGG | 0.585998 | 4_1:-76796030 | Msa0573580:CDS |
| GATAATGCTGGAAGGTGCCA+AGG | 0.586807 | 4_1:-76796688 | Msa0573580:CDS |
| TCTACTAAGCGCGGCCCACA+CGG | 0.590563 | 4_1:+76799533 | None:intergenic |
| GAACAGCAAGTAGAGCAGCT+TGG | 0.594879 | 4_1:-76797931 | Msa0573580:CDS |
| GGAGTGGGCTTTGTATGCAC+CGG | 0.596065 | 4_1:+76795921 | None:intergenic |
| TTTGTGAAATTATTGAACAG+AGG | 0.605498 | 4_1:-76795495 | Msa0573580:three_prime_UTR |
| GCCGCGCTTAGTAGAAGGGA+GGG | 0.610430 | 4_1:-76799525 | Msa0573580:five_prime_UTR |
| AAGAATTGGAACCAGTGACA+TGG | 0.617295 | 4_1:-76795548 | Msa0573580:three_prime_UTR |
| CGTGCAAGTGCAAATGCGAT+GGG | 0.619756 | 4_1:+76799446 | None:intergenic |
| CATAACCGATCCAACCCACC+CGG | 0.625634 | 4_1:+76794603 | None:intergenic |
| TAATGATGTTGATGCGACCA+TGG | 0.625933 | 4_1:-76796283 | Msa0573580:CDS |
| AAACGAAATAGAGAAAGCGA+AGG | 0.628174 | 4_1:+76799488 | None:intergenic |
| GCCAAAACCGATCCAATCAA+CGG | 0.631826 | 4_1:+76794653 | None:intergenic |
| GGCCGCGCTTAGTAGAAGGG+AGG | 0.635506 | 4_1:-76799526 | Msa0573580:five_prime_UTR |
| ACAAGAGCCAAGAATAAAAG+GGG | 0.640430 | 4_1:-76798728 | Msa0573580:intron |
| AGCAGCTGCACCAATTGGAG+CGG | 0.641867 | 4_1:+76796209 | None:intergenic |
| GCAGAACTTGAAGAGCTAGA+GGG | 0.644080 | 4_1:-76796029 | Msa0573580:CDS |
| CGAAACAAACTAATCCGTGT+GGG | 0.652795 | 4_1:-76799547 | Msa0573580:five_prime_UTR |
| GCATACAAAGCCCACTCCTG+AGG | 0.653225 | 4_1:-76795916 | Msa0573580:CDS |
| CAAACCCTAATTTCTCACCA+GGG | 0.653246 | 4_1:-76799353 | Msa0573580:intron |
| AGCCGCATTGAGAACTGGAG+CGG | 0.658271 | 4_1:-76796649 | Msa0573580:CDS |
| GCCTTCGGTTTCATCTACTG+TGG | 0.658292 | 4_1:+76794699 | None:intergenic |
| CTGTGCATGTCCCAGCTAGG+CGG | 0.671027 | 4_1:-76795953 | Msa0573580:CDS |
| ACGAAACAAACTAATCCGTG+TGG | 0.671909 | 4_1:-76799548 | Msa0573580:five_prime_UTR |
| CCTAGCTGGGACATGCACAG+AGG | 0.679296 | 4_1:+76795956 | None:intergenic |
| TCCCTCCCTTCTACTAAGCG+CGG | 0.681789 | 4_1:+76799524 | None:intergenic |
| GCCACAGTAGATGAAACCGA+AGG | 0.716491 | 4_1:-76794700 | Msa0573580:three_prime_UTR |
| TTACAGATGATAATGCTGGA+AGG | 0.735879 | 4_1:-76796696 | Msa0573580:intron |
| AGCCGCTCCAGTTCTCAATG+CGG | 0.737111 | 4_1:+76796647 | None:intergenic |
| TTGATGATGAGAATGATACG+GGG | 0.784907 | 4_1:-76795578 | Msa0573580:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTATATTATTTAA+AGG | - | chr4_1:76797006-76797025 | Msa0573580:intron | 0.0% |
| !! | TTTAATATAAATAAAATTAT+TGG | + | chr4_1:76798849-76798868 | None:intergenic | 0.0% |
| !!! | TATTATTTATAAGTTTGTTA+AGG | + | chr4_1:76796392-76796411 | None:intergenic | 10.0% |
| !! | TATAATTATATATCATTACT+AGG | + | chr4_1:76796709-76796728 | None:intergenic | 10.0% |
| !! | GTAAACAAATATTATATTTA+CGG | - | chr4_1:76796734-76796753 | Msa0573580:intron | 10.0% |
| !! | TAAACAAATATTATATTTAC+GGG | - | chr4_1:76796735-76796754 | Msa0573580:intron | 10.0% |
| !! | AAACATGTATAAATAAATAA+AGG | - | chr4_1:76796768-76796787 | Msa0573580:intron | 10.0% |
| !! | ATTATGAAATTGTGATAAAA+AGG | + | chr4_1:76794650-76794669 | None:intergenic | 15.0% |
| !!! | GTTTATATTATATTGCTATT+CGG | - | chr4_1:76794910-76794929 | Msa0573580:intron | 15.0% |
| !!! | ACTTTTTTAAAGAATATAAG+TGG | - | chr4_1:76795273-76795292 | Msa0573580:intron | 15.0% |
| !!! | CTTTTTTAAAGAATATAAGT+GGG | - | chr4_1:76795274-76795293 | Msa0573580:intron | 15.0% |
| !!! | TTTGTTTCCATATATTATTT+TGG | - | chr4_1:76795316-76795335 | Msa0573580:intron | 15.0% |
| !! | AAAACTTATCTATAGAAATT+TGG | + | chr4_1:76795824-76795843 | None:intergenic | 15.0% |
| !! | GTAATAAATCAATTGAATTA+TGG | + | chr4_1:76796813-76796832 | None:intergenic | 15.0% |
| !!! | CATATTGATTCTAAATAAAT+TGG | - | chr4_1:76796969-76796988 | Msa0573580:intron | 15.0% |
| !!! | TTGCAATATTATATTTTTTC+AGG | - | chr4_1:76797641-76797660 | Msa0573580:intron | 15.0% |
| !! | TACTTATTATGTGAAATATT+CGG | - | chr4_1:76797859-76797878 | Msa0573580:intron | 15.0% |
| !!! | CATTAATATGTTTTTATGAT+TGG | - | chr4_1:76798146-76798165 | Msa0573580:intron | 15.0% |
| !!! | TAATTTAGATGCTTTTTATT+TGG | - | chr4_1:76798925-76798944 | Msa0573580:intron | 15.0% |
| !! | CAATTTCATAATTCTCATAT+TGG | - | chr4_1:76794658-76794677 | Msa0573580:three_prime_UTR | 20.0% |
| !!! | AACTTTAGAAAAATTAAGTG+AGG | - | chr4_1:76794793-76794812 | Msa0573580:intron | 20.0% |
| !!! | TTCTTTAAAAAAGTATCCAT+GGG | + | chr4_1:76795267-76795286 | None:intergenic | 20.0% |
| !!! | ATTCTTTAAAAAAGTATCCA+TGG | + | chr4_1:76795268-76795287 | None:intergenic | 20.0% |
| !! | ATAATATATGGAAACAAACA+GGG | + | chr4_1:76795314-76795333 | None:intergenic | 20.0% |
| !! | AATAATATATGGAAACAAAC+AGG | + | chr4_1:76795315-76795334 | None:intergenic | 20.0% |
| !! | AAGTTCTCCAAAATAATATA+TGG | + | chr4_1:76795326-76795345 | None:intergenic | 20.0% |
| !!! | TAATAATGGATTTCTAAAGA+GGG | + | chr4_1:76795893-76795912 | None:intergenic | 20.0% |
| !!! | ACATTCATTATTTTCAAAAG+TGG | - | chr4_1:76796122-76796141 | Msa0573580:intron | 20.0% |
| !! | ATCTACGTTAATATACAAAA+TGG | + | chr4_1:76796236-76796255 | None:intergenic | 20.0% |
| !! | TTGTATATTAACGTAGATAT+AGG | - | chr4_1:76796238-76796257 | Msa0573580:CDS | 20.0% |
| !!! | TTTTTTTGTAGAAAATTGAC+AGG | + | chr4_1:76796531-76796550 | None:intergenic | 20.0% |
| !! | AAAACTATAAAAATGCCTTT+GGG | + | chr4_1:76796558-76796577 | None:intergenic | 20.0% |
| !!! | CAATTGATTTATTACATTAC+TGG | - | chr4_1:76796818-76796837 | Msa0573580:intron | 20.0% |
| !! | TAAAAAAACAGTGCAAAAAA+TGG | + | chr4_1:76797102-76797121 | None:intergenic | 20.0% |
| !!! | ATTTTTTGCACTGTTTTTTT+AGG | - | chr4_1:76797101-76797120 | Msa0573580:intron | 20.0% |
| !!! | TTTTTTGCACTGTTTTTTTA+GGG | - | chr4_1:76797102-76797121 | Msa0573580:intron | 20.0% |
| !! | TTTATAATATTCTTCTGATG+TGG | - | chr4_1:76797539-76797558 | Msa0573580:intron | 20.0% |
| !!! | ATATGTTTTTATGATTGGTA+TGG | - | chr4_1:76798151-76798170 | Msa0573580:intron | 20.0% |
| !!! | TTCTAAAGTTGATAGAGTAT+TGG | + | chr4_1:76794783-76794802 | None:intergenic | 25.0% |
| ! | CAATTAAGCCTATAGTTATA+AGG | - | chr4_1:76795008-76795027 | Msa0573580:intron | 25.0% |
| ! | AGTAGTATCCTTATAACTAT+AGG | + | chr4_1:76795019-76795038 | None:intergenic | 25.0% |
| !! | TTGTATTTAGTTTCTACCAA+TGG | - | chr4_1:76795063-76795082 | Msa0573580:intron | 25.0% |
| ! | TTTAAAGAATATAAGTGGGA+CGG | - | chr4_1:76795278-76795297 | Msa0573580:intron | 25.0% |
| ! | AAAGTTTCTTCATAGTTGAT+TGG | - | chr4_1:76795597-76795616 | Msa0573580:intron | 25.0% |
| !! | TCAGTTCACATTTTATAAAG+TGG | + | chr4_1:76795709-76795728 | None:intergenic | 25.0% |
| ! | AAAATGTGAACTGATAGAAA+AGG | - | chr4_1:76795715-76795734 | Msa0573580:intron | 25.0% |
| ! | TAGATTACTAGAATGAAAGT+GGG | - | chr4_1:76795744-76795763 | Msa0573580:intron | 25.0% |
| ! | AAATGTAGAATAGAATGATC+AGG | + | chr4_1:76795799-76795818 | None:intergenic | 25.0% |
| !! | TTCTATAGATAAGTTTTACC+TGG | - | chr4_1:76795827-76795846 | Msa0573580:intron | 25.0% |
| !!! | ATTTTTAGCATAAAATGTCC+AGG | + | chr4_1:76795848-76795867 | None:intergenic | 25.0% |
| !!! | AATAATGGATTTCTAAAGAG+GGG | + | chr4_1:76795892-76795911 | None:intergenic | 25.0% |
| !!! | CTAATAATGGATTTCTAAAG+AGG | + | chr4_1:76795894-76795913 | None:intergenic | 25.0% |
| !! | CTTTAGAAATCCATTATTAG+TGG | - | chr4_1:76795894-76795913 | Msa0573580:CDS | 25.0% |
| ! | AAAATAATGAATGTAACTGC+TGG | + | chr4_1:76796116-76796135 | None:intergenic | 25.0% |
| !!! | GAATCTTTTTAGCGATTTAA+TGG | + | chr4_1:76796153-76796172 | None:intergenic | 25.0% |
| !!! | CTTTCTTTTTAGCGATTTAA+TGG | + | chr4_1:76796189-76796208 | None:intergenic | 25.0% |
| ! | CATTAAATCGCTAAAAAGAA+AGG | - | chr4_1:76796187-76796206 | Msa0573580:intron | 25.0% |
| ! | TACGTTAATATACAAAATGG+TGG | + | chr4_1:76796233-76796252 | None:intergenic | 25.0% |
| ! | CTAAAATAAGCTAATCCAAA+CGG | - | chr4_1:76796454-76796473 | Msa0573580:intron | 25.0% |
| ! | GAAAACTATAAAAATGCCTT+TGG | + | chr4_1:76796559-76796578 | None:intergenic | 25.0% |
| ! | AGGGAAAAATATCCATTTAA+GGG | + | chr4_1:76796663-76796682 | None:intergenic | 25.0% |
| ! | AAGGGAAAAATATCCATTTA+AGG | + | chr4_1:76796664-76796683 | None:intergenic | 25.0% |
| !! | TTGTCTTTTATATCTTATGC+TGG | - | chr4_1:76797224-76797243 | Msa0573580:intron | 25.0% |
| !!! | ATTATATACTTGGTGTGTTA+AGG | - | chr4_1:76797469-76797488 | Msa0573580:intron | 25.0% |
| !! | TCTTTCTTATCTTTAGGTTA+CGG | - | chr4_1:76797600-76797619 | Msa0573580:intron | 25.0% |
| !!! | TTTTTATTTTCACTCTGCTA+TGG | - | chr4_1:76797795-76797814 | Msa0573580:intron | 25.0% |
| ! | ATTAATGTATAGCAGTTGAA+TGG | - | chr4_1:76798176-76798195 | Msa0573580:intron | 25.0% |
| ! | TTTGTGAAATTATTGAACAG+AGG | - | chr4_1:76798457-76798476 | Msa0573580:intron | 25.0% |
| !!! | TATTTTTTCTTGTGAAAGTG+CGG | - | chr4_1:76799038-76799057 | Msa0573580:intron | 25.0% |
| ! | AAATTAGGGTTTGGAATAAG+AGG | + | chr4_1:76794592-76794611 | None:intergenic | 30.0% |
| ! | TCCATGTTTTCAAAGCTTTT+TGG | - | chr4_1:76794734-76794753 | Msa0573580:intron | 30.0% |
| !! | ACCAAAAAGCTTTGAAAACA+TGG | + | chr4_1:76794738-76794757 | None:intergenic | 30.0% |
| !! | GCTTTTTGGTAAAACTAAAC+AGG | - | chr4_1:76794748-76794767 | Msa0573580:intron | 30.0% |
| ATTGATAAGCAACGTTATTG+TGG | - | chr4_1:76794954-76794973 | Msa0573580:intron | 30.0% | |
| CTATAGGCTTAATTGAGATA+TGG | + | chr4_1:76795003-76795022 | None:intergenic | 30.0% | |
| !!! | AAAAAAGTATCCATGGGTTT+TGG | + | chr4_1:76795261-76795280 | None:intergenic | 30.0% |
| TTAAAGAATATAAGTGGGAC+GGG | - | chr4_1:76795279-76795298 | Msa0573580:intron | 30.0% | |
| !! | TGATTTTTGTGGTAGTGTTT+GGG | + | chr4_1:76795408-76795427 | None:intergenic | 30.0% |
| !! | ATGATTTTTGTGGTAGTGTT+TGG | + | chr4_1:76795409-76795428 | None:intergenic | 30.0% |
| ACTTATTTGAGTCTATCTAC+TGG | + | chr4_1:76795433-76795452 | None:intergenic | 30.0% | |
| ! | TTCTTCATAGTTGATTGGTT+TGG | - | chr4_1:76795602-76795621 | Msa0573580:intron | 30.0% |
| CTAGATTACTAGAATGAAAG+TGG | - | chr4_1:76795743-76795762 | Msa0573580:intron | 30.0% | |
| TGAATTTCTATCTATTGCAG+CGG | - | chr4_1:76795966-76795985 | Msa0573580:CDS | 30.0% | |
| TACAATGTTTGAAAAGGAAG+AGG | - | chr4_1:76795992-76796011 | Msa0573580:CDS | 30.0% | |
| !! | CTTTTTAGCGATTTAATGGT+TGG | + | chr4_1:76796149-76796168 | None:intergenic | 30.0% |
| TCGCTAAAAAGATTCAAAAC+TGG | - | chr4_1:76796158-76796177 | Msa0573580:intron | 30.0% | |
| ! | TTTTGTAGAAAATTGACAGG+TGG | + | chr4_1:76796528-76796547 | None:intergenic | 30.0% |
| !! | CTACTTTTCTTGCAAAACTT+AGG | - | chr4_1:76796578-76796597 | Msa0573580:intron | 30.0% |
| ! | ATTTGACAATTTTCTCCTGA+TGG | - | chr4_1:76796602-76796621 | Msa0573580:intron | 30.0% |
| !! | GAAAGAGCGTTAAACAAAAA+AGG | + | chr4_1:76797586-76797605 | None:intergenic | 30.0% |
| TAACGCTCTTTCTTATCTTT+AGG | - | chr4_1:76797594-76797613 | Msa0573580:intron | 30.0% | |
| TAACAAGAACTGCTTAAAAC+AGG | + | chr4_1:76798308-76798327 | None:intergenic | 30.0% | |
| !! | CATTGATGATGAGAATGATA+CGG | - | chr4_1:76798372-76798391 | Msa0573580:intron | 30.0% |
| !! | ATTGATGATGAGAATGATAC+GGG | - | chr4_1:76798373-76798392 | Msa0573580:intron | 30.0% |
| TGCGTAAAAAAAATCTACCA+AGG | + | chr4_1:76798533-76798552 | None:intergenic | 30.0% | |
| !! | CAACGTTTTCACGTTTTATT+TGG | + | chr4_1:76798590-76798609 | None:intergenic | 30.0% |
| ! | ATAGTTGGTTCTCTGATATT+AGG | - | chr4_1:76798618-76798637 | Msa0573580:intron | 30.0% |
| ! | TAGTTGGTTCTCTGATATTA+GGG | - | chr4_1:76798619-76798638 | Msa0573580:intron | 30.0% |
| GTATAGTCTATATAAAGTGC+GGG | + | chr4_1:76798827-76798846 | None:intergenic | 30.0% | |
| GGTATAGTCTATATAAAGTG+CGG | + | chr4_1:76798828-76798847 | None:intergenic | 30.0% | |
| !!! | ATTTTTTCTTGTGAAAGTGC+GGG | - | chr4_1:76799039-76799058 | Msa0573580:intron | 30.0% |
| AGTAGAGAAATAGAAAGAAG+AGG | - | chr4_1:76799394-76799413 | Msa0573580:five_prime_UTR | 30.0% | |
| AAATAAGAGAAAGCTTCTCT+CGG | - | chr4_1:76799433-76799452 | Msa0573580:five_prime_UTR | 30.0% | |
| !! | TCTCTGTTTTTCTTTTCTAG+AGG | - | chr4_1:76799461-76799480 | Msa0573580:five_prime_UTR | 30.0% |
| !! | CTCTGTTTTTCTTTTCTAGA+GGG | - | chr4_1:76799462-76799481 | Msa0573580:five_prime_UTR | 30.0% |
| AAACGAAATAGAGAAAGCGA+AGG | + | chr4_1:76794467-76794486 | None:intergenic | 35.0% | |
| AAGGAATGATGAGAAGAAGA+AGG | + | chr4_1:76794631-76794650 | None:intergenic | 35.0% | |
| TCATATTGGATTCTGTTGCA+GGG | - | chr4_1:76794672-76794691 | Msa0573580:three_prime_UTR | 35.0% | |
| ATAAGCAACGTTATTGTGGA+TGG | - | chr4_1:76794958-76794977 | Msa0573580:intron | 35.0% | |
| TACCAATGGTTTACAGTTTG+AGG | - | chr4_1:76795077-76795096 | Msa0573580:intron | 35.0% | |
| ACCAATGGTTTACAGTTTGA+GGG | - | chr4_1:76795078-76795097 | Msa0573580:intron | 35.0% | |
| GCTTGAATTATGTAGACACT+TGG | - | chr4_1:76795131-76795150 | Msa0573580:intron | 35.0% | |
| ACTTGGAATGCTAGAGAAAA+AGG | - | chr4_1:76795148-76795167 | Msa0573580:intron | 35.0% | |
| TCACAAGAGCCAAGAATAAA+AGG | - | chr4_1:76795222-76795241 | Msa0573580:intron | 35.0% | |
| CACAAGAGCCAAGAATAAAA+GGG | - | chr4_1:76795223-76795242 | Msa0573580:intron | 35.0% | |
| ACAAGAGCCAAGAATAAAAG+GGG | - | chr4_1:76795224-76795243 | Msa0573580:intron | 35.0% | |
| ! | ATCTACTGGCATGATTTTTG+TGG | + | chr4_1:76795419-76795438 | None:intergenic | 35.0% |
| TAACTCAAGTGCAAGTCATA+AGG | + | chr4_1:76795486-76795505 | None:intergenic | 35.0% | |
| GACTTGCACTTGAGTTAATT+TGG | - | chr4_1:76795489-76795508 | Msa0573580:three_prime_UTR | 35.0% | |
| CCTTCATTGAAGAGAAACTT+GGG | - | chr4_1:76795549-76795568 | Msa0573580:three_prime_UTR | 35.0% | |
| ! | AAACTTTACCCTCTTTTCCA+CGG | + | chr4_1:76795584-76795603 | None:intergenic | 35.0% |
| ATGACCTATAGAAGCAGTTA+AGG | - | chr4_1:76795637-76795656 | Msa0573580:intron | 35.0% | |
| !! | TTATAAAGTGGTGTCGTAGT+AGG | + | chr4_1:76795697-76795716 | None:intergenic | 35.0% |
| AAATCCATTATTAGTGGAGC+AGG | - | chr4_1:76795900-76795919 | Msa0573580:CDS | 35.0% | |
| CAAAATAAGCTCCATCCAAA+CGG | + | chr4_1:76796266-76796285 | None:intergenic | 35.0% | |
| GTGTATTGTATGTGAGTCTA+TGG | + | chr4_1:76796481-76796500 | None:intergenic | 35.0% | |
| TAGAAAATTGACAGGTGGTT+GGG | + | chr4_1:76796523-76796542 | None:intergenic | 35.0% | |
| CTACAAAAAAATCTGCCCAA+AGG | - | chr4_1:76796540-76796559 | Msa0573580:intron | 35.0% | |
| TGCGATTTCATGCAAAAACA+TGG | - | chr4_1:76796631-76796650 | Msa0573580:CDS | 35.0% | |
| ACATGGACATTTCCCTTAAA+TGG | - | chr4_1:76796648-76796667 | Msa0573580:CDS | 35.0% | |
| TCATATAGAATGAGAGCAGA+AGG | - | chr4_1:76796891-76796910 | Msa0573580:intron | 35.0% | |
| CATATAGAATGAGAGCAGAA+GGG | - | chr4_1:76796892-76796911 | Msa0573580:intron | 35.0% | |
| ATATAGAATGAGAGCAGAAG+GGG | - | chr4_1:76796893-76796912 | Msa0573580:intron | 35.0% | |
| CATTGCTCAAATGATTGAAC+TGG | + | chr4_1:76797033-76797052 | None:intergenic | 35.0% | |
| ! | AGTGCAAAAAATGGAAGTAC+TGG | + | chr4_1:76797093-76797112 | None:intergenic | 35.0% |
| TTAAGAACTGATCCTCCAAT+CGG | + | chr4_1:76797137-76797156 | None:intergenic | 35.0% | |
| TTATCAGAACAAGACTGAAC+TGG | + | chr4_1:76797179-76797198 | None:intergenic | 35.0% | |
| ! | TGTGTTACAGATGATAATGC+TGG | - | chr4_1:76797252-76797271 | Msa0573580:intron | 35.0% |
| ! | TTACAGATGATAATGCTGGA+AGG | - | chr4_1:76797256-76797275 | Msa0573580:intron | 35.0% |
| TGAGAACATGAAACAGATTC+AGG | - | chr4_1:76797711-76797730 | Msa0573580:intron | 35.0% | |
| ! | TCTGAATTTGTTTGCCATTC+AGG | - | chr4_1:76797889-76797908 | Msa0573580:intron | 35.0% |
| TATAGCAGTTGAATGGTTTG+TGG | - | chr4_1:76798183-76798202 | Msa0573580:intron | 35.0% | |
| ATGAATTGCTTGAAGCTGTT+TGG | - | chr4_1:76798265-76798284 | Msa0573580:intron | 35.0% | |
| TGATATATTGCTTCTCGCTT+TGG | - | chr4_1:76798329-76798348 | Msa0573580:intron | 35.0% | |
| !! | TTGATGATGAGAATGATACG+GGG | - | chr4_1:76798374-76798393 | Msa0573580:intron | 35.0% |
| TAATTGCCCGCAAATTTGAA+CGG | - | chr4_1:76798756-76798775 | Msa0573580:CDS | 35.0% | |
| ! | ATGGGGATTTTCTTAAAACG+CGG | - | chr4_1:76799149-76799168 | Msa0573580:intron | 35.0% |
| ! | ATTTTCTTAAAACGCGGGTA+TGG | - | chr4_1:76799155-76799174 | Msa0573580:intron | 35.0% |
| ! | TTTTCTTAAAACGCGGGTAT+GGG | - | chr4_1:76799156-76799175 | Msa0573580:intron | 35.0% |
| ! | TCATCTACTGTGGCATTTTT+GGG | + | chr4_1:76799246-76799265 | None:intergenic | 35.0% |
| ! | TTCATCTACTGTGGCATTTT+TGG | + | chr4_1:76799247-76799266 | None:intergenic | 35.0% |
| AATAAGAGAAAGCTTCTCTC+GGG | - | chr4_1:76799434-76799453 | Msa0573580:five_prime_UTR | 35.0% | |
| CAAACCCTAATTTCTCACCA+GGG | - | chr4_1:76794599-76794618 | Msa0573580:three_prime_UTR | 40.0% | |
| CTCATATTGGATTCTGTTGC+AGG | - | chr4_1:76794671-76794690 | Msa0573580:three_prime_UTR | 40.0% | |
| TCCCTCAAACTGTAAACCAT+TGG | + | chr4_1:76795082-76795101 | None:intergenic | 40.0% | |
| ! | GTACGTACCCCTTTTATTCT+TGG | + | chr4_1:76795234-76795253 | None:intergenic | 40.0% |
| !!! | AGTATCCATGGGTTTTGGTT+TGG | + | chr4_1:76795256-76795275 | None:intergenic | 40.0% |
| CATAAGGAGGGATACACTAT+GGG | + | chr4_1:76795470-76795489 | None:intergenic | 40.0% | |
| TCATAAGGAGGGATACACTA+TGG | + | chr4_1:76795471-76795490 | None:intergenic | 40.0% | |
| TCAAGTGCAAGTCATAAGGA+GGG | + | chr4_1:76795482-76795501 | None:intergenic | 40.0% | |
| AGTTTCTCTTCAATGAAGGC+TGG | + | chr4_1:76795548-76795567 | None:intergenic | 40.0% | |
| GCCTTCATTGAAGAGAAACT+TGG | - | chr4_1:76795548-76795567 | Msa0573580:three_prime_UTR | 40.0% | |
| CCCAAGTTTCTCTTCAATGA+AGG | + | chr4_1:76795552-76795571 | None:intergenic | 40.0% | |
| CCTATAGAAGCAGTTAAGGA+CGG | - | chr4_1:76795641-76795660 | Msa0573580:intron | 40.0% | |
| TGAACCTGCTCCACTAATAA+TGG | + | chr4_1:76795907-76795926 | None:intergenic | 40.0% | |
| CGGCGATACAATGTTTGAAA+AGG | - | chr4_1:76795986-76796005 | Msa0573580:CDS | 40.0% | |
| GTAGAAAATTGACAGGTGGT+TGG | + | chr4_1:76796524-76796543 | None:intergenic | 40.0% | |
| GAAATCGCATAAAAGCCATC+AGG | + | chr4_1:76796620-76796639 | None:intergenic | 40.0% | |
| ! | TGAACTACGACTTGTTCATG+CGG | - | chr4_1:76797051-76797070 | Msa0573580:intron | 40.0% |
| !! | ATACTTGGTGTGTTAAGGCT+TGG | - | chr4_1:76797474-76797493 | Msa0573580:intron | 40.0% |
| ! | TAAGGCTTGGTTGTTGTTGT+TGG | - | chr4_1:76797487-76797506 | Msa0573580:intron | 40.0% |
| TAATGATGTTGATGCGACCA+TGG | - | chr4_1:76797669-76797688 | Msa0573580:intron | 40.0% | |
| CTGTTCGTTAATCTCATCCA+TGG | + | chr4_1:76797689-76797708 | None:intergenic | 40.0% | |
| GAATTATTGTCCGCTCCAAT+TGG | - | chr4_1:76797733-76797752 | Msa0573580:intron | 40.0% | |
| ! | TGCTTCAAGTTCATCCTGAA+TGG | + | chr4_1:76797906-76797925 | None:intergenic | 40.0% |
| AGAACTGCTTAAAACAGGAC+AGG | + | chr4_1:76798303-76798322 | None:intergenic | 40.0% | |
| TATTGCTTCTCGCTTTGGTT+AGG | - | chr4_1:76798334-76798353 | Msa0573580:intron | 40.0% | |
| TGGTTAGGTCAGAATTTAGC+AGG | - | chr4_1:76798349-76798368 | Msa0573580:intron | 40.0% | |
| TACGGGGCATACATAAGAAT+TGG | - | chr4_1:76798390-76798409 | Msa0573580:intron | 40.0% | |
| AAGAATTGGAACCAGTGACA+TGG | - | chr4_1:76798404-76798423 | Msa0573580:intron | 40.0% | |
| AAGATAAAAGCGACTGTGAG+AGG | + | chr4_1:76798439-76798458 | None:intergenic | 40.0% | |
| ! | TTTTGCCTTTGATGTCACCT+TGG | - | chr4_1:76798513-76798532 | Msa0573580:intron | 40.0% |
| ATCTACCAAGGTGACATCAA+AGG | + | chr4_1:76798521-76798540 | None:intergenic | 40.0% | |
| ! | GGGTAAATACCCGCATTTTT+GGG | - | chr4_1:76798715-76798734 | Msa0573580:intron | 40.0% |
| !!! | AATACCCGCATTTTTGGGTA+TGG | - | chr4_1:76798720-76798739 | Msa0573580:intron | 40.0% |
| !!! | ATACCCGCATTTTTGGGTAT+GGG | - | chr4_1:76798721-76798740 | Msa0573580:intron | 40.0% |
| AATTGCCCGCAAATTTGAAC+GGG | - | chr4_1:76798757-76798776 | Msa0573580:CDS | 40.0% | |
| TCTATATAAAGTGCGGGCAT+GGG | + | chr4_1:76798821-76798840 | None:intergenic | 40.0% | |
| ACTTAGATACCCATAGGGTA+TGG | - | chr4_1:76799082-76799101 | Msa0573580:intron | 40.0% | |
| CTTAGATACCCATAGGGTAT+GGG | - | chr4_1:76799083-76799102 | Msa0573580:intron | 40.0% | |
| TTAGATACCCATAGGGTATG+GGG | - | chr4_1:76799084-76799103 | Msa0573580:intron | 40.0% | |
| ! | TGGGGATTTTCTTAAAACGC+GGG | - | chr4_1:76799150-76799169 | Msa0573580:intron | 40.0% |
| TTTCTTAAAACGCGGGTATG+GGG | - | chr4_1:76799157-76799176 | Msa0573580:intron | 40.0% | |
| GTCGAATTTGGGTCTCAATT+TGG | + | chr4_1:76799280-76799299 | None:intergenic | 40.0% | |
| TCCAATCAACGGTCGAATTT+GGG | + | chr4_1:76799291-76799310 | None:intergenic | 40.0% | |
| ATCCAATCAACGGTCGAATT+TGG | + | chr4_1:76799292-76799311 | None:intergenic | 40.0% | |
| ! | AATTCGACCGTTGATTGGAT+CGG | - | chr4_1:76799292-76799311 | Msa0573580:intron | 40.0% |
| GAAAGAAGAGGTGAATGACT+TGG | - | chr4_1:76799406-76799425 | Msa0573580:five_prime_UTR | 40.0% | |
| CCTGGTGAGAAATTAGGGTT+TGG | + | chr4_1:76794601-76794620 | None:intergenic | 45.0% | |
| CCAAACCCTAATTTCTCACC+AGG | - | chr4_1:76794598-76794617 | Msa0573580:three_prime_UTR | 45.0% | |
| CGAACCCTGGTGAGAAATTA+GGG | + | chr4_1:76794606-76794625 | None:intergenic | 45.0% | |
| ACGAACCCTGGTGAGAAATT+AGG | + | chr4_1:76794607-76794626 | None:intergenic | 45.0% | |
| ! | GGAGAGCGTGCTTCTTAAAA+AGG | - | chr4_1:76795169-76795188 | Msa0573580:intron | 45.0% |
| ACGTACCAAACCAAAACCCA+TGG | - | chr4_1:76795248-76795267 | Msa0573580:intron | 45.0% | |
| GATACACTATGGGCTCTGTT+TGG | + | chr4_1:76795460-76795479 | None:intergenic | 45.0% | |
| CTCAAGTGCAAGTCATAAGG+AGG | + | chr4_1:76795483-76795502 | None:intergenic | 45.0% | |
| ! | TTTACCCTCTTTTCCACGGT+TGG | + | chr4_1:76795580-76795599 | None:intergenic | 45.0% |
| CCGTCCTTAACTGCTTCTAT+AGG | + | chr4_1:76795644-76795663 | None:intergenic | 45.0% | |
| TCAGGTAGTTCGGTAGGTTT+AGG | - | chr4_1:76795668-76795687 | Msa0573580:intron | 45.0% | |
| CAGGTAGTTCGGTAGGTTTA+GGG | - | chr4_1:76795669-76795688 | Msa0573580:intron | 45.0% | |
| AGAATGAAAGTGGGAGTGAC+TGG | - | chr4_1:76795753-76795772 | Msa0573580:intron | 45.0% | |
| GAATGAAAGTGGGAGTGACT+GGG | - | chr4_1:76795754-76795773 | Msa0573580:intron | 45.0% | |
| CCTGATCATGAATACGCAAC+TGG | + | chr4_1:76796053-76796072 | None:intergenic | 45.0% | |
| CCAGTTGCGTATTCATGATC+AGG | - | chr4_1:76796050-76796069 | Msa0573580:intron | 45.0% | |
| ACGTAGATATAGGCTCCGTT+TGG | - | chr4_1:76796248-76796267 | Msa0573580:CDS | 45.0% | |
| AGATATAGGCTCCGTTTGGA+TGG | - | chr4_1:76796252-76796271 | Msa0573580:CDS | 45.0% | |
| ATGTGAGTCTATGGTCCGTT+TGG | + | chr4_1:76796472-76796491 | None:intergenic | 45.0% | |
| ! | TTTCCCTTGAGCTTTTGCGT+TGG | - | chr4_1:76796676-76796695 | Msa0573580:CDS | 45.0% |
| ! | GAACTACGACTTGTTCATGC+GGG | - | chr4_1:76797052-76797071 | Msa0573580:intron | 45.0% |
| !! | TACTGTTTCTGTGGTTGCCT+TGG | + | chr4_1:76797284-76797303 | None:intergenic | 45.0% |
| AAATCAGCAGCTGCACCAAT+TGG | + | chr4_1:76797751-76797770 | None:intergenic | 45.0% | |
| AGCAGAACTTGAAGAGCTAG+AGG | - | chr4_1:76797922-76797941 | Msa0573580:CDS | 45.0% | |
| GCAGAACTTGAAGAGCTAGA+GGG | - | chr4_1:76797923-76797942 | Msa0573580:CDS | 45.0% | |
| !! | GCTTCTGGAGTTGTAATTGC+AGG | + | chr4_1:76797977-76797996 | None:intergenic | 45.0% |
| AAAGCTGCCAATTCTTCCTC+AGG | + | chr4_1:76798055-76798074 | None:intergenic | 45.0% | |
| ! | TTTGAGCAGGTCCCTTTTCT+CGG | - | chr4_1:76798092-76798111 | Msa0573580:intron | 45.0% |
| TAGTGTCGTAGCCGAGAAAA+GGG | + | chr4_1:76798106-76798125 | None:intergenic | 45.0% | |
| ATAGTGTCGTAGCCGAGAAA+AGG | + | chr4_1:76798107-76798126 | None:intergenic | 45.0% | |
| AACGTTGCGAGTAGCATAGT+TGG | - | chr4_1:76798603-76798622 | Msa0573580:intron | 45.0% | |
| CTGATATTAGGGTTGAGCAC+CGG | - | chr4_1:76798630-76798649 | Msa0573580:intron | 45.0% | |
| TGATATTAGGGTTGAGCACC+GGG | - | chr4_1:76798631-76798650 | Msa0573580:intron | 45.0% | |
| !!! | ATTTTTTGCGGGTGCCCATT+GGG | + | chr4_1:76798682-76798701 | None:intergenic | 45.0% |
| !!! | TATTTTTTGCGGGTGCCCAT+TGG | + | chr4_1:76798683-76798702 | None:intergenic | 45.0% |
| ! | CGGGTAAATACCCGCATTTT+TGG | - | chr4_1:76798714-76798733 | Msa0573580:intron | 45.0% |
| AAGCCCATACCCAAAAATGC+GGG | + | chr4_1:76798727-76798746 | None:intergenic | 45.0% | |
| CAAGCCCATACCCAAAAATG+CGG | + | chr4_1:76798728-76798747 | None:intergenic | 45.0% | |
| !!! | GCATTTTTGGGTATGGGCTT+GGG | - | chr4_1:76798727-76798746 | Msa0573580:intron | 45.0% |
| CTATATAAAGTGCGGGCATG+GGG | + | chr4_1:76798820-76798839 | None:intergenic | 45.0% | |
| GTCTATATAAAGTGCGGGCA+TGG | + | chr4_1:76798822-76798841 | None:intergenic | 45.0% | |
| ! | TCTTGTGAAAGTGCGGGTAA+TGG | - | chr4_1:76799045-76799064 | Msa0573580:intron | 45.0% |
| ! | CTTGTGAAAGTGCGGGTAAT+GGG | - | chr4_1:76799046-76799065 | Msa0573580:intron | 45.0% |
| ACCAAACTTATTGCCCACGA+GGG | - | chr4_1:76799113-76799132 | Msa0573580:intron | 45.0% | |
| ACCCAAATTCGACCGTTGAT+TGG | - | chr4_1:76799287-76799306 | Msa0573580:intron | 45.0% | |
| !! | ACCGTTGATTGGATCGGTTT+TGG | - | chr4_1:76799298-76799317 | Msa0573580:intron | 45.0% |
| GCCAAAACCGATCCAATCAA+CGG | + | chr4_1:76799302-76799321 | None:intergenic | 45.0% | |
| !! | TTGATTGGATCGGTTTTGGC+AGG | - | chr4_1:76799302-76799321 | Msa0573580:intron | 45.0% |
| !! | ATATATATATATTATATACT+TGG | - | chr4_1:76797459-76797478 | Msa0573580:intron | 5.0% |
| CGTGCAAGTGCAAATGCGAT+GGG | + | chr4_1:76794509-76794528 | None:intergenic | 50.0% | |
| GAAGAAGAAGGAACGAACCC+TGG | + | chr4_1:76794619-76794638 | None:intergenic | 50.0% | |
| GATTCTGTTGCAGGGAGACT+GGG | - | chr4_1:76794680-76794699 | Msa0573580:three_prime_UTR | 50.0% | |
| AGGCTGCAGCTGAAGTTGAA+AGG | - | chr4_1:76795189-76795208 | Msa0573580:intron | 50.0% | |
| GGCTGCAGCTGAAGTTGAAA+GGG | - | chr4_1:76795190-76795209 | Msa0573580:intron | 50.0% | |
| TAGCACCAACCGTGGAAAAG+AGG | - | chr4_1:76795572-76795591 | Msa0573580:three_prime_UTR | 50.0% | |
| AGCACCAACCGTGGAAAAGA+GGG | - | chr4_1:76795573-76795592 | Msa0573580:three_prime_UTR | 50.0% | |
| GAACAGCAAGTAGAGCAGCT+TGG | - | chr4_1:76796021-76796040 | Msa0573580:CDS | 50.0% | |
| GCACCAACGCAAAAGCTCAA+GGG | + | chr4_1:76796682-76796701 | None:intergenic | 50.0% | |
| AGCACCAACGCAAAAGCTCA+AGG | + | chr4_1:76796683-76796702 | None:intergenic | 50.0% | |
| ! | ACTTGTTCATGCGGGTTGAC+TGG | - | chr4_1:76797060-76797079 | Msa0573580:intron | 50.0% |
| ! | TTAGGGCTGAGTTGACCGAT+TGG | - | chr4_1:76797119-76797138 | Msa0573580:intron | 50.0% |
| !! | GATAATGCTGGAAGGTGCCA+AGG | - | chr4_1:76797264-76797283 | Msa0573580:intron | 50.0% |
| !! | CAATGCGGCTACTGTTTCTG+TGG | + | chr4_1:76797293-76797312 | None:intergenic | 50.0% |
| ACAGTAGCCGCATTGAGAAC+TGG | - | chr4_1:76797298-76797317 | Msa0573580:intron | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+TGG | + | chr4_1:76797418-76797437 | None:intergenic | 50.0% | |
| !!! | TGCAGCTGCTGATTTTGACG+AGG | - | chr4_1:76797756-76797775 | Msa0573580:intron | 50.0% |
| TTTGTATGCACCGGACGAGT+AGG | + | chr4_1:76798025-76798044 | None:intergenic | 50.0% | |
| GCCAATTCTTCCTCAGGAGT+GGG | + | chr4_1:76798049-76798068 | None:intergenic | 50.0% | |
| TGCCAATTCTTCCTCAGGAG+TGG | + | chr4_1:76798050-76798069 | None:intergenic | 50.0% | |
| GGCAGAATTCTCCATGTCAC+TGG | + | chr4_1:76798418-76798437 | None:intergenic | 50.0% | |
| CAATTGGACCCAAGCCCAAT+GGG | - | chr4_1:76798665-76798684 | Msa0573580:intron | 50.0% | |
| GCACCCGCAAAAAATACCCA+TGG | - | chr4_1:76798687-76798706 | Msa0573580:intron | 50.0% | |
| !!! | CCGCCATGGGTATTTTTTGC+GGG | + | chr4_1:76798693-76798712 | None:intergenic | 50.0% |
| CCCGCAAAAAATACCCATGG+CGG | - | chr4_1:76798690-76798709 | Msa0573580:intron | 50.0% | |
| !!! | CCCGCCATGGGTATTTTTTG+CGG | + | chr4_1:76798694-76798713 | None:intergenic | 50.0% |
| CCGCAAAAAATACCCATGGC+GGG | - | chr4_1:76798691-76798710 | Msa0573580:intron | 50.0% | |
| ! | CAAAAAATACCCATGGCGGG+CGG | - | chr4_1:76798694-76798713 | Msa0573580:intron | 50.0% |
| !! | AAAAAATACCCATGGCGGGC+GGG | - | chr4_1:76798695-76798714 | Msa0573580:intron | 50.0% |
| !!! | CGCATTTTTGGGTATGGGCT+TGG | - | chr4_1:76798726-76798745 | Msa0573580:intron | 50.0% |
| ACGGGCACTTAGATACCCAT+AGG | - | chr4_1:76799076-76799095 | Msa0573580:intron | 50.0% | |
| CGGGCACTTAGATACCCATA+GGG | - | chr4_1:76799077-76799096 | Msa0573580:intron | 50.0% | |
| ATACCCATAGGGTATGGGGA+CGG | - | chr4_1:76799088-76799107 | Msa0573580:intron | 50.0% | |
| CACCAAACTTATTGCCCACG+AGG | - | chr4_1:76799112-76799131 | Msa0573580:intron | 50.0% | |
| ACCCTCGTGGGCAATAAGTT+TGG | + | chr4_1:76799117-76799136 | None:intergenic | 50.0% | |
| TTAAAACGCGGGTATGGGGA+TGG | - | chr4_1:76799161-76799180 | Msa0573580:CDS | 50.0% | |
| TAAAACGCGGGTATGGGGAT+GGG | - | chr4_1:76799162-76799181 | Msa0573580:CDS | 50.0% | |
| ACTATGGTACCCTGCCCAAT+GGG | - | chr4_1:76799186-76799205 | Msa0573580:CDS | 50.0% | |
| GATGGCAATGGGTACCCATT+GGG | + | chr4_1:76799203-76799222 | None:intergenic | 50.0% | |
| TACCCATTGCCATCCCTAAC+CGG | - | chr4_1:76799209-76799228 | Msa0573580:CDS | 50.0% | |
| GCCACAGTAGATGAAACCGA+AGG | - | chr4_1:76799252-76799271 | Msa0573580:five_prime_UTR | 50.0% | |
| GCCTTCGGTTTCATCTACTG+TGG | + | chr4_1:76799256-76799275 | None:intergenic | 50.0% | |
| !! | GGGTCTCAATTTGGTGCCTT+CGG | + | chr4_1:76799271-76799290 | None:intergenic | 50.0% |
| !! | GGATCGGTTTTGGCAGGTTT+CGG | - | chr4_1:76799308-76799327 | Msa0573580:intron | 50.0% |
| CAGGTTTCGGATTTGTCCGT+CGG | - | chr4_1:76799321-76799340 | Msa0573580:intron | 50.0% | |
| !! | GATTTGTCCGTCGGTTTGTC+CGG | - | chr4_1:76799330-76799349 | Msa0573580:intron | 50.0% |
| !! | ATTTGTCCGTCGGTTTGTCC+GGG | - | chr4_1:76799331-76799350 | Msa0573580:intron | 50.0% |
| TCCCTCCCTTCTACTAAGCG+CGG | + | chr4_1:76794431-76794450 | None:intergenic | 55.0% | |
| GCGTGCAAGTGCAAATGCGA+TGG | + | chr4_1:76794510-76794529 | None:intergenic | 55.0% | |
| GGATTCTGTTGCAGGGAGAC+TGG | - | chr4_1:76794679-76794698 | Msa0573580:three_prime_UTR | 55.0% | |
| AACTTGGGTAGCACCAACCG+TGG | - | chr4_1:76795564-76795583 | Msa0573580:three_prime_UTR | 55.0% | |
| GCAGTTAAGGACGGCAGATC+AGG | - | chr4_1:76795650-76795669 | Msa0573580:intron | 55.0% | |
| GGACGGCAGATCAGGTAGTT+CGG | - | chr4_1:76795658-76795677 | Msa0573580:intron | 55.0% | |
| GGCAGATCAGGTAGTTCGGT+AGG | - | chr4_1:76795662-76795681 | Msa0573580:intron | 55.0% | |
| AGGTGGTTGGGCTTCTGATC+GGG | + | chr4_1:76796511-76796530 | None:intergenic | 55.0% | |
| CAGGTGGTTGGGCTTCTGAT+CGG | + | chr4_1:76796512-76796531 | None:intergenic | 55.0% | |
| TGAGAGCAGAAGGGGAAGAC+AGG | - | chr4_1:76796901-76796920 | Msa0573580:intron | 55.0% | |
| AGCCGCATTGAGAACTGGAG+CGG | - | chr4_1:76797303-76797322 | Msa0573580:intron | 55.0% | |
| AGCCGCTCCAGTTCTCAATG+CGG | + | chr4_1:76797308-76797327 | None:intergenic | 55.0% | |
| AGCAGCTGCACCAATTGGAG+CGG | + | chr4_1:76797746-76797765 | None:intergenic | 55.0% | |
| !! | AGAGCTAGAGGGTGCTGAGT+TGG | - | chr4_1:76797934-76797953 | Msa0573580:CDS | 55.0% |
| ! | GGAGTGGGCTTTGTATGCAC+CGG | + | chr4_1:76798034-76798053 | None:intergenic | 55.0% |
| GCATACAAAGCCCACTCCTG+AGG | - | chr4_1:76798036-76798055 | Msa0573580:intron | 55.0% | |
| GCCCACTCCTGAGGAAGAAT+TGG | - | chr4_1:76798045-76798064 | Msa0573580:intron | 55.0% | |
| GGCAGCTTTGCAAGCTGAGA+TGG | - | chr4_1:76798066-76798085 | Msa0573580:intron | 55.0% | |
| GCAATTGGACCCAAGCCCAA+TGG | - | chr4_1:76798664-76798683 | Msa0573580:intron | 55.0% | |
| TTTGGGTATGGGCTTGGGCA+CGG | - | chr4_1:76798732-76798751 | Msa0573580:CDS | 55.0% | |
| CCGCACCCGTTCAAATTTGC+GGG | + | chr4_1:76798765-76798784 | None:intergenic | 55.0% | |
| CCCGCAAATTTGAACGGGTG+CGG | - | chr4_1:76798762-76798781 | Msa0573580:CDS | 55.0% | |
| CCCGCACCCGTTCAAATTTG+CGG | + | chr4_1:76798766-76798785 | None:intergenic | 55.0% | |
| CCGCAAATTTGAACGGGTGC+GGG | - | chr4_1:76798763-76798782 | Msa0573580:CDS | 55.0% | |
| AATTTGAACGGGTGCGGGTG+CGG | - | chr4_1:76798768-76798787 | Msa0573580:CDS | 55.0% | |
| TATAAAGTGCGGGCATGGGG+CGG | + | chr4_1:76798817-76798836 | None:intergenic | 55.0% | |
| !! | GAAAGTGCGGGTAATGGGTG+CGG | - | chr4_1:76799051-76799070 | Msa0573580:intron | 55.0% |
| !! | AAAGTGCGGGTAATGGGTGC+GGG | - | chr4_1:76799052-76799071 | Msa0573580:intron | 55.0% |
| TACCCATAGGGTATGGGGAC+GGG | - | chr4_1:76799089-76799108 | Msa0573580:intron | 55.0% | |
| ! | GAGGGTATGAGCTCGGGTAT+GGG | - | chr4_1:76799131-76799150 | Msa0573580:intron | 55.0% |
| AGGGTATGAGCTCGGGTATG+GGG | - | chr4_1:76799132-76799151 | Msa0573580:intron | 55.0% | |
| CACTATGGTACCCTGCCCAA+TGG | - | chr4_1:76799185-76799204 | Msa0573580:CDS | 55.0% | |
| CAATGGGTACCCATTGGGCA+GGG | + | chr4_1:76799198-76799217 | None:intergenic | 55.0% | |
| GGATGGCAATGGGTACCCAT+TGG | + | chr4_1:76799204-76799223 | None:intergenic | 55.0% | |
| ACCCATTGCCATCCCTAACC+GGG | - | chr4_1:76799210-76799229 | Msa0573580:CDS | 55.0% | |
| ! | ATCCCTAACCGGGCGGTTTT+GGG | - | chr4_1:76799220-76799239 | Msa0573580:CDS | 55.0% |
| !! | TTTTTGGGCCCAAAACCGCC+CGG | + | chr4_1:76799231-76799250 | None:intergenic | 55.0% |
| !! | TTTGTCCGGGTGGGTTGGAT+CGG | - | chr4_1:76799344-76799363 | Msa0573580:intron | 55.0% |
| CATAACCGATCCAACCCACC+CGG | + | chr4_1:76799352-76799371 | None:intergenic | 55.0% | |
| !! | GGGTGGGTTGGATCGGTTAT+GGG | - | chr4_1:76799351-76799370 | Msa0573580:intron | 55.0% |
| GGGTGCTTGCTTCTTCTCTC+TGG | - | chr4_1:76799482-76799501 | Msa0573580:five_prime_UTR | 55.0% | |
| TCTACTAAGCGCGGCCCACA+CGG | + | chr4_1:76794422-76794441 | None:intergenic | 60.0% | |
| TGTGGGCCGCGCTTAGTAGA+AGG | - | chr4_1:76794422-76794441 | Msa0573580:three_prime_UTR | 60.0% | |
| GTGGGCCGCGCTTAGTAGAA+GGG | - | chr4_1:76794423-76794442 | Msa0573580:three_prime_UTR | 60.0% | |
| GCCGCGCTTAGTAGAAGGGA+GGG | - | chr4_1:76794427-76794446 | Msa0573580:three_prime_UTR | 60.0% | |
| ! | GGGCTGAGTTGACCGATTGG+AGG | - | chr4_1:76797122-76797141 | Msa0573580:intron | 60.0% |
| GGGACATGCACAGAGGCTTC+TGG | + | chr4_1:76797992-76798011 | None:intergenic | 60.0% | |
| CCTAGCTGGGACATGCACAG+AGG | + | chr4_1:76797999-76798018 | None:intergenic | 60.0% | |
| CCTCTGTGCATGTCCCAGCT+AGG | - | chr4_1:76797996-76798015 | Msa0573580:intron | 60.0% | |
| CTGTGCATGTCCCAGCTAGG+CGG | - | chr4_1:76797999-76798018 | Msa0573580:intron | 60.0% | |
| ! | GCTGAGATGGCGCTTTGAGC+AGG | - | chr4_1:76798079-76798098 | Msa0573580:intron | 60.0% |
| CCAATTGCCATCCCTACGCC+CGG | + | chr4_1:76798652-76798671 | None:intergenic | 60.0% | |
| GGTATTTACCCGCCCGCCAT+GGG | + | chr4_1:76798706-76798725 | None:intergenic | 60.0% | |
| TTGGGTATGGGCTTGGGCAC+GGG | - | chr4_1:76798733-76798752 | Msa0573580:CDS | 60.0% | |
| ATTTGAACGGGTGCGGGTGC+GGG | - | chr4_1:76798769-76798788 | Msa0573580:CDS | 60.0% | |
| ATAAAGTGCGGGCATGGGGC+GGG | + | chr4_1:76798816-76798835 | None:intergenic | 60.0% | |
| TGCCCGTCCCCATACCCTAT+GGG | + | chr4_1:76799094-76799113 | None:intergenic | 60.0% | |
| ! | TGCCCACGAGGGTATGAGCT+CGG | - | chr4_1:76799124-76799143 | Msa0573580:intron | 60.0% |
| ACCCGAGCTCATACCCTCGT+GGG | + | chr4_1:76799129-76799148 | None:intergenic | 60.0% | |
| TACCCGAGCTCATACCCTCG+TGG | + | chr4_1:76799130-76799149 | None:intergenic | 60.0% | |
| ! | CGAGGGTATGAGCTCGGGTA+TGG | - | chr4_1:76799130-76799149 | Msa0573580:intron | 60.0% |
| GGGTATGGGGATGGGCACTA+TGG | - | chr4_1:76799170-76799189 | Msa0573580:CDS | 60.0% | |
| GCAATGGGTACCCATTGGGC+AGG | + | chr4_1:76799199-76799218 | None:intergenic | 60.0% | |
| GCCCGGTTAGGGATGGCAAT+GGG | + | chr4_1:76799214-76799233 | None:intergenic | 60.0% | |
| CATTGCCATCCCTAACCGGG+CGG | - | chr4_1:76799213-76799232 | Msa0573580:CDS | 60.0% | |
| CAAAACCGCCCGGTTAGGGA+TGG | + | chr4_1:76799221-76799240 | None:intergenic | 60.0% | |
| ! | CATCCCTAACCGGGCGGTTT+TGG | - | chr4_1:76799219-76799238 | Msa0573580:CDS | 60.0% |
| AACCCACCCGGACAAACCGA+CGG | + | chr4_1:76799340-76799359 | None:intergenic | 60.0% | |
| !! | CGGGTGGGTTGGATCGGTTA+TGG | - | chr4_1:76799350-76799369 | Msa0573580:intron | 60.0% |
| GGCCGCGCTTAGTAGAAGGG+AGG | - | chr4_1:76794426-76794445 | Msa0573580:three_prime_UTR | 65.0% | |
| GACGAGTAGGCCGCCTAGCT+GGG | + | chr4_1:76798012-76798031 | None:intergenic | 65.0% | |
| AGCTAGGCGGCCTACTCGTC+CGG | - | chr4_1:76798012-76798031 | Msa0573580:intron | 65.0% | |
| !! | TAGGGTTGAGCACCGGGCGT+AGG | - | chr4_1:76798637-76798656 | Msa0573580:intron | 65.0% |
| !! | AGGGTTGAGCACCGGGCGTA+GGG | - | chr4_1:76798638-76798657 | Msa0573580:intron | 65.0% |
| !! | TTGAGCACCGGGCGTAGGGA+TGG | - | chr4_1:76798642-76798661 | Msa0573580:intron | 65.0% |
| CCGGGCGTAGGGATGGCAAT+TGG | - | chr4_1:76798649-76798668 | Msa0573580:intron | 65.0% | |
| TGCGGGTGCCCATTGGGCTT+GGG | + | chr4_1:76798676-76798695 | None:intergenic | 65.0% | |
| TTGCGGGTGCCCATTGGGCT+TGG | + | chr4_1:76798677-76798696 | None:intergenic | 65.0% | |
| GGGTATTTACCCGCCCGCCA+TGG | + | chr4_1:76798707-76798726 | None:intergenic | 65.0% | |
| TAAAGTGCGGGCATGGGGCG+GGG | + | chr4_1:76798815-76798834 | None:intergenic | 65.0% | |
| !! | GCGGGTAATGGGTGCGGGTA+CGG | - | chr4_1:76799057-76799076 | Msa0573580:intron | 65.0% |
| !! | CGGGTAATGGGTGCGGGTAC+GGG | - | chr4_1:76799058-76799077 | Msa0573580:intron | 65.0% |
| GTGCCCGTCCCCATACCCTA+TGG | + | chr4_1:76799095-76799114 | None:intergenic | 65.0% | |
| ! | GCCCACGAGGGTATGAGCTC+GGG | - | chr4_1:76799125-76799144 | Msa0573580:intron | 65.0% |
| CGCCCGGTTAGGGATGGCAA+TGG | + | chr4_1:76799215-76799234 | None:intergenic | 65.0% | |
| GGCCCAAAACCGCCCGGTTA+GGG | + | chr4_1:76799225-76799244 | None:intergenic | 65.0% | |
| !! | TGTCCGTCGGTTTGTCCGGG+TGG | - | chr4_1:76799334-76799353 | Msa0573580:intron | 65.0% |
| !! | GTCCGTCGGTTTGTCCGGGT+GGG | - | chr4_1:76799335-76799354 | Msa0573580:intron | 65.0% |
| !! | GTCGGTTTGTCCGGGTGGGT+TGG | - | chr4_1:76799339-76799358 | Msa0573580:intron | 65.0% |
| GGACGAGTAGGCCGCCTAGC+TGG | + | chr4_1:76798013-76798032 | None:intergenic | 70.0% | |
| AACGGGTGCGGGTGCGGGTA+CGG | - | chr4_1:76798774-76798793 | Msa0573580:CDS | 70.0% | |
| GGGCCCAAAACCGCCCGGTT+AGG | + | chr4_1:76799226-76799245 | None:intergenic | 70.0% | |
| ACGGGTGCGGGTGCGGGTAC+GGG | - | chr4_1:76798775-76798794 | Msa0573580:CDS | 75.0% | |
| ! | AGTGCGGGCATGGGGCGGGG+TGG | + | chr4_1:76798812-76798831 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 76794407 | 76799567 | 76794407 | ID=Msa0573580;Name=Msa0573580 |
| chr4_1 | mRNA | 76794407 | 76799567 | 76794407 | ID=Msa0573580-mRNA-1;Parent=Msa0573580;Name=Msa0573580-mRNA-1;_AED=0.13;_eAED=0.13;_QI=246|1|1|1|0.62|0.44|9|632|222 |
| chr4_1 | exon | 76794407 | 76794742 | 76794407 | ID=Msa0573580-mRNA-1:exon:26998;Parent=Msa0573580-mRNA-1 |
| chr4_1 | exon | 76795322 | 76795613 | 76795322 | ID=Msa0573580-mRNA-1:exon:26997;Parent=Msa0573580-mRNA-1 |
| chr4_1 | exon | 76795874 | 76796063 | 76795874 | ID=Msa0573580-mRNA-1:exon:26996;Parent=Msa0573580-mRNA-1 |
| chr4_1 | exon | 76796197 | 76796311 | 76796197 | ID=Msa0573580-mRNA-1:exon:26995;Parent=Msa0573580-mRNA-1 |
| chr4_1 | exon | 76796621 | 76796712 | 76796621 | ID=Msa0573580-mRNA-1:exon:26994;Parent=Msa0573580-mRNA-1 |
| chr4_1 | exon | 76797903 | 76797988 | 76797903 | ID=Msa0573580-mRNA-1:exon:26993;Parent=Msa0573580-mRNA-1 |
| chr4_1 | exon | 76798729 | 76798828 | 76798729 | ID=Msa0573580-mRNA-1:exon:26992;Parent=Msa0573580-mRNA-1 |
| chr4_1 | exon | 76799160 | 76799281 | 76799160 | ID=Msa0573580-mRNA-1:exon:26991;Parent=Msa0573580-mRNA-1 |
| chr4_1 | exon | 76799354 | 76799567 | 76799354 | ID=Msa0573580-mRNA-1:exon:26990;Parent=Msa0573580-mRNA-1 |
| chr4_1 | five_prime_UTR | 76799354 | 76799567 | 76799354 | ID=Msa0573580-mRNA-1:five_prime_utr;Parent=Msa0573580-mRNA-1 |
| chr4_1 | five_prime_UTR | 76799250 | 76799281 | 76799250 | ID=Msa0573580-mRNA-1:five_prime_utr;Parent=Msa0573580-mRNA-1 |
| chr4_1 | CDS | 76799160 | 76799249 | 76799160 | ID=Msa0573580-mRNA-1:cds;Parent=Msa0573580-mRNA-1 |
| chr4_1 | CDS | 76798729 | 76798828 | 76798729 | ID=Msa0573580-mRNA-1:cds;Parent=Msa0573580-mRNA-1 |
| chr4_1 | CDS | 76797903 | 76797988 | 76797903 | ID=Msa0573580-mRNA-1:cds;Parent=Msa0573580-mRNA-1 |
| chr4_1 | CDS | 76796621 | 76796712 | 76796621 | ID=Msa0573580-mRNA-1:cds;Parent=Msa0573580-mRNA-1 |
| chr4_1 | CDS | 76796197 | 76796311 | 76796197 | ID=Msa0573580-mRNA-1:cds;Parent=Msa0573580-mRNA-1 |
| chr4_1 | CDS | 76795878 | 76796063 | 76795878 | ID=Msa0573580-mRNA-1:cds;Parent=Msa0573580-mRNA-1 |
| chr4_1 | three_prime_UTR | 76795874 | 76795877 | 76795874 | ID=Msa0573580-mRNA-1:three_prime_utr;Parent=Msa0573580-mRNA-1 |
| chr4_1 | three_prime_UTR | 76795322 | 76795613 | 76795322 | ID=Msa0573580-mRNA-1:three_prime_utr;Parent=Msa0573580-mRNA-1 |
| chr4_1 | three_prime_UTR | 76794407 | 76794742 | 76794407 | ID=Msa0573580-mRNA-1:three_prime_utr;Parent=Msa0573580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
