AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0970480


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0970480 MtrunA17_Chr6g0449451 95.614 228 10 0 1 228 154 381 1.70e-153 431
Msa0970480 MtrunA17_Chr7g0227301 62.069 232 80 3 1 228 117 344 4.84e-94 279
Msa0970480 MtrunA17_Chr6g0449431 65.497 171 37 5 1 171 34 182 8.43e-68 210
Msa0970480 MtrunA17_Chr5g0446741 49.239 197 88 5 1 192 170 359 1.37e-57 188
Msa0970480 MtrunA17_Chr3g0078811 56.897 116 50 0 1 116 170 285 1.07e-46 157
Msa0970480 MtrunA17_Chr6g0449411 85.366 41 6 0 34 74 23 63 7.59e-19 77.4
Msa0970480 MtrunA17_Chr6g0449421 85.714 35 3 1 1 35 66 98 6.91e-13 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0970480 AT5G40510.1 49.123 228 104 3 1 228 118 333 3.63e-75 231
Msa0970480 AT5G40510.2 49.123 228 104 3 1 228 154 369 7.15e-75 231
Msa0970480 AT3G27570.2 51.528 229 101 3 1 228 121 340 2.73e-71 221
Msa0970480 AT3G27570.1 51.528 229 101 3 1 228 160 379 4.20e-71 222
Msa0970480 AT4G26620.1 45.946 185 88 3 1 173 170 354 5.78e-51 171
Msa0970480 AT5G55900.2 43.523 193 96 4 7 192 60 246 2.33e-48 161
Msa0970480 AT5G55900.1 43.523 193 96 4 7 192 164 350 1.67e-47 162

Find 62 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTGTTGCCAAGGTGTTAA+TGG 0.172942 6_4:+1989062 Msa0970480:CDS
AACTGCTACATTATTCTTCT+TGG 0.192835 6_4:-1989003 None:intergenic
ATGTACAAGCTTCTATATAT+TGG 0.272133 6_4:+1989378 Msa0970480:three_prime_UTR
GAAAGATCGGATATCAGTTT+TGG 0.295741 6_4:+1987257 Msa0970480:CDS
GCTGTTGCCAAGGTGTTAAT+GGG 0.308804 6_4:+1989063 Msa0970480:CDS
TATAATAACAACAATAATAA+TGG 0.330852 6_4:+1989308 Msa0970480:three_prime_UTR
GCAACCTGTTGCTGAACTTA+AGG 0.368595 6_4:+1988941 Msa0970480:CDS
CTTGCAGCTACCGGTATTGT+TGG 0.391175 6_4:+1989194 Msa0970480:CDS
AAATTGTTTCAGAGGTCAAA+TGG 0.399678 6_4:+1988917 Msa0970480:intron
TTTGCTCAAAACTTGCAGTT+TGG 0.405270 6_4:-1989097 None:intergenic
AGTAAGGCAGGAACATCATT+AGG 0.406602 6_4:-1987475 None:intergenic
GACGCGAGGTGCGGTGTTTG+TGG 0.418580 6_4:+1987186 Msa0970480:CDS
CAACCTGTTGCTGAACTTAA+GGG 0.423121 6_4:+1988942 Msa0970480:CDS
ACGCGAGGTGCGGTGTTTGT+GGG 0.426000 6_4:+1987187 Msa0970480:CDS
GAGCAGAACAAACTTGCTAA+TGG 0.427764 6_4:+1988972 Msa0970480:CDS
AAATTATAACTTTCTCAGAA+TGG 0.436442 6_4:-1989333 None:intergenic
TGTTGTTGTTTGATTGAAAA+GGG 0.443020 6_4:+1987038 Msa0970480:five_prime_UTR
GGCAATGTGTTGGTCAAGTA+AGG 0.450314 6_4:-1987491 None:intergenic
GCTTTAGCAGCTGTTGCCAT+TGG 0.453891 6_4:+1989218 Msa0970480:CDS
GCTCCCTTAAGTTCAGCAAC+AGG 0.454167 6_4:-1988945 None:intergenic
GCTTCTATATATTGGAATTG+AGG 0.457484 6_4:+1989386 Msa0970480:three_prime_UTR
TTGATTGAAAAGGGGCTTGG+AGG 0.470660 6_4:+1987047 Msa0970480:five_prime_UTR
CGCGATATTCTTGCAGCTAC+CGG 0.474954 6_4:+1989185 Msa0970480:CDS
TGTTTGATTGAAAAGGGGCT+TGG 0.479485 6_4:+1987044 Msa0970480:five_prime_UTR
AATTGTTTCAGAGGTCAAAT+GGG 0.479845 6_4:+1988918 Msa0970480:intron
GTGTTGTTGTTTGATTGAAA+AGG 0.497030 6_4:+1987037 Msa0970480:five_prime_UTR
TAGGCCAACTCCCACATACT+TGG 0.498564 6_4:-1989151 None:intergenic
TGCTAAAGCGCCAACAATAC+CGG 0.518193 6_4:-1989204 None:intergenic
AGCTCCGAGGATTGAAAGAT+CGG 0.523820 6_4:+1987244 Msa0970480:CDS
AATTTAATCACATTTAGTCC+TGG 0.524943 6_4:+1987315 Msa0970480:CDS
ATATCCGATCTTTCAATCCT+CGG 0.536130 6_4:-1987248 None:intergenic
TTGGCATGTTCTCATATTGG+TGG 0.538059 6_4:+1987276 Msa0970480:CDS
ATTGGTGGTCATAAGTATGC+TGG 0.540034 6_4:+1987291 Msa0970480:CDS
TTATGGTGAGTTGTAAATCA+TGG 0.543757 6_4:+1987100 Msa0970480:exon
ATGTGTTGGTCAAGTAAGGC+AGG 0.545435 6_4:-1987487 None:intergenic
AGGTCAGGCTGAGAGCTTGA+GGG 0.548318 6_4:+1989257 Msa0970480:exon
AAGGTCAGGCTGAGAGCTTG+AGG 0.549317 6_4:+1989256 Msa0970480:exon
TTGAGCTTGTCAATGAGCAC+AGG 0.557496 6_4:-1987210 None:intergenic
ACATTTAGTCCTGGACCAGA+TGG 0.561723 6_4:+1987324 Msa0970480:CDS
GTTGTTGTTTGATTGAAAAG+GGG 0.563828 6_4:+1987039 Msa0970480:five_prime_UTR
GGAGCCAAGTATGTGGGAGT+TGG 0.571748 6_4:+1989147 Msa0970480:CDS
GGAAGTCGCGACGCGAGGTG+CGG 0.571970 6_4:+1987177 Msa0970480:CDS
CCTCTCCCTTGGCAATGTGT+TGG 0.573050 6_4:-1987501 None:intergenic
AAGAAACCCCATTAACACCT+TGG 0.574689 6_4:-1989070 None:intergenic
AACAACAATGAAAATGTGGT+TGG 0.583428 6_4:+1989041 Msa0970480:CDS
CTCATGGAAGTCGCGACGCG+AGG 0.583473 6_4:+1987172 Msa0970480:CDS
AAGCAGGGGAGCCAAGTATG+TGG 0.589468 6_4:+1989140 Msa0970480:CDS
TCTATAAAATCTGTAACCAA+TGG 0.591007 6_4:-1989234 None:intergenic
TCTGAACAACAATGAAAATG+TGG 0.606271 6_4:+1989037 Msa0970480:CDS
ACTTGACCAACACATTGCCA+AGG 0.613163 6_4:+1987495 Msa0970480:CDS
AATGTGGTTGGCTGTTGCCA+AGG 0.613481 6_4:+1989053 Msa0970480:CDS
TATGGTGAGTTGTAAATCAT+GGG 0.620772 6_4:+1987101 Msa0970480:exon
AGCAGGGGAGCCAAGTATGT+GGG 0.622858 6_4:+1989141 Msa0970480:CDS
AGTTGTAAATCATGGGATGG+TGG 0.625130 6_4:+1987108 Msa0970480:CDS
CTGTTGCCAAGGTGTTAATG+GGG 0.628919 6_4:+1989064 Msa0970480:CDS
GGAGTGCAAGATGTGATAGC+AGG 0.631484 6_4:+1987129 Msa0970480:CDS
GTGAGTTGTAAATCATGGGA+TGG 0.633317 6_4:+1987105 Msa0970480:CDS
CCAACACATTGCCAAGGGAG+AGG 0.633691 6_4:+1987501 Msa0970480:CDS
CTTGACCAACACATTGCCAA+GGG 0.637382 6_4:+1987496 Msa0970480:CDS
GGGCTTGGAGGAATCAAATG+TGG 0.656077 6_4:+1987059 Msa0970480:five_prime_UTR
ATTGTTTCAGAGGTCAAATG+GGG 0.656633 6_4:+1988919 Msa0970480:intron
AATGAAGAAATTCAGCTCCG+AGG 0.716639 6_4:+1987231 Msa0970480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGTTCAATATTATAAAAA+TGG + chr6_4:1988659-1988678 Msa0970480:intron 10.0%
!! TATAATAACAACAATAATAA+TGG + chr6_4:1989308-1989327 Msa0970480:three_prime_UTR 10.0%
!! TAAGTTCAATATTATAAAAA+TGG + chr6_4:1988659-1988678 Msa0970480:intron 10.0%
!! TATAATAACAACAATAATAA+TGG + chr6_4:1989308-1989327 Msa0970480:three_prime_UTR 10.0%
!! TATAAAAAATCACATGTTAA+AGG - chr6_4:1987579-1987598 None:intergenic 15.0%
!!! TAACATGTGATTTTTTATAA+TGG + chr6_4:1987580-1987599 Msa0970480:intron 15.0%
!!! TATATACATTAGTTGATTTA+AGG + chr6_4:1988709-1988728 Msa0970480:intron 15.0%
!! TATAAAAAATCACATGTTAA+AGG - chr6_4:1987579-1987598 None:intergenic 15.0%
!!! TAACATGTGATTTTTTATAA+TGG + chr6_4:1987580-1987599 Msa0970480:intron 15.0%
!!! TATATACATTAGTTGATTTA+AGG + chr6_4:1988709-1988728 Msa0970480:intron 15.0%
!! ATACCTGTAATTAAATATCA+GGG - chr6_4:1987443-1987462 None:intergenic 20.0%
!! AATGCAGAATAAAAAATAAG+TGG - chr6_4:1987550-1987569 None:intergenic 20.0%
!! AAATTATAACTTTCTCAGAA+TGG - chr6_4:1989336-1989355 None:intergenic 20.0%
!!! CTGAGAAAGTTATAATTTTT+TGG + chr6_4:1989338-1989357 Msa0970480:three_prime_UTR 20.0%
!! ATACCTGTAATTAAATATCA+GGG - chr6_4:1987443-1987462 None:intergenic 20.0%
!! AATGCAGAATAAAAAATAAG+TGG - chr6_4:1987550-1987569 None:intergenic 20.0%
!! AAATTATAACTTTCTCAGAA+TGG - chr6_4:1989336-1989355 None:intergenic 20.0%
!!! CTGAGAAAGTTATAATTTTT+TGG + chr6_4:1989338-1989357 Msa0970480:three_prime_UTR 20.0%
!!! TGTTGTTGTTTGATTGAAAA+GGG + chr6_4:1987038-1987057 Msa0970480:five_prime_UTR 25.0%
! AATTTAATCACATTTAGTCC+TGG + chr6_4:1987315-1987334 Msa0970480:CDS 25.0%
! AATCCTTCATAACAAATAAG+AGG - chr6_4:1987395-1987414 None:intergenic 25.0%
! TACCTGTAATTAAATATCAG+GGG - chr6_4:1987442-1987461 None:intergenic 25.0%
! CATACCTGTAATTAAATATC+AGG - chr6_4:1987444-1987463 None:intergenic 25.0%
! CTGATATTTAATTACAGGTA+TGG + chr6_4:1987442-1987461 Msa0970480:intron 25.0%
! AACCATGAACTAACATAAAT+CGG + chr6_4:1987735-1987754 Msa0970480:intron 25.0%
! AACATGTAATGTATTACTAG+TGG - chr6_4:1988017-1988036 None:intergenic 25.0%
! ATTAAAACTTGAGATTACGA+AGG - chr6_4:1988273-1988292 None:intergenic 25.0%
! AACATCATATAGAGTGAATT+TGG - chr6_4:1988435-1988454 None:intergenic 25.0%
! AACTAATGTATATATCCATG+TGG - chr6_4:1988703-1988722 None:intergenic 25.0%
!!! AAGTTTTGAGCAAAAAAAAG+TGG + chr6_4:1989106-1989125 Msa0970480:CDS 25.0%
!! ATATCGCGTTTTTGTAATAT+AGG - chr6_4:1989173-1989192 None:intergenic 25.0%
! TCTATAAAATCTGTAACCAA+TGG - chr6_4:1989237-1989256 None:intergenic 25.0%
!! TTGGTTACAGATTTTATAGA+AGG + chr6_4:1989237-1989256 Msa0970480:CDS 25.0%
! ATGTACAAGCTTCTATATAT+TGG + chr6_4:1989378-1989397 Msa0970480:three_prime_UTR 25.0%
!!! TGTTGTTGTTTGATTGAAAA+GGG + chr6_4:1987038-1987057 Msa0970480:five_prime_UTR 25.0%
! AATTTAATCACATTTAGTCC+TGG + chr6_4:1987315-1987334 Msa0970480:CDS 25.0%
! AATCCTTCATAACAAATAAG+AGG - chr6_4:1987395-1987414 None:intergenic 25.0%
! TACCTGTAATTAAATATCAG+GGG - chr6_4:1987442-1987461 None:intergenic 25.0%
! CATACCTGTAATTAAATATC+AGG - chr6_4:1987444-1987463 None:intergenic 25.0%
! CTGATATTTAATTACAGGTA+TGG + chr6_4:1987442-1987461 Msa0970480:intron 25.0%
! AACCATGAACTAACATAAAT+CGG + chr6_4:1987735-1987754 Msa0970480:intron 25.0%
! AACATGTAATGTATTACTAG+TGG - chr6_4:1988017-1988036 None:intergenic 25.0%
! ATTAAAACTTGAGATTACGA+AGG - chr6_4:1988273-1988292 None:intergenic 25.0%
! AACATCATATAGAGTGAATT+TGG - chr6_4:1988435-1988454 None:intergenic 25.0%
! AACTAATGTATATATCCATG+TGG - chr6_4:1988703-1988722 None:intergenic 25.0%
!!! AAGTTTTGAGCAAAAAAAAG+TGG + chr6_4:1989106-1989125 Msa0970480:CDS 25.0%
!! ATATCGCGTTTTTGTAATAT+AGG - chr6_4:1989173-1989192 None:intergenic 25.0%
! TCTATAAAATCTGTAACCAA+TGG - chr6_4:1989237-1989256 None:intergenic 25.0%
!! TTGGTTACAGATTTTATAGA+AGG + chr6_4:1989237-1989256 Msa0970480:CDS 25.0%
! ATGTACAAGCTTCTATATAT+TGG + chr6_4:1989378-1989397 Msa0970480:three_prime_UTR 25.0%
!! GTGTTGTTGTTTGATTGAAA+AGG + chr6_4:1987037-1987056 Msa0970480:five_prime_UTR 30.0%
!! GTTGTTGTTTGATTGAAAAG+GGG + chr6_4:1987039-1987058 Msa0970480:five_prime_UTR 30.0%
!!! TAGCTTTTTCGATGATGTTA+TGG + chr6_4:1987083-1987102 Msa0970480:exon 30.0%
TTATGGTGAGTTGTAAATCA+TGG + chr6_4:1987100-1987119 Msa0970480:exon 30.0%
TATGGTGAGTTGTAAATCAT+GGG + chr6_4:1987101-1987120 Msa0970480:exon 30.0%
!! TATATTTTTGTGTGTGCTCA+TGG + chr6_4:1987156-1987175 Msa0970480:CDS 30.0%
ATGGAAAAATTATGGGTCAT+TGG + chr6_4:1987343-1987362 Msa0970480:CDS 30.0%
!! GATCCTCTTATTTGTTATGA+AGG + chr6_4:1987389-1987408 Msa0970480:intron 30.0%
AACCCCTGATATTTAATTAC+AGG + chr6_4:1987437-1987456 Msa0970480:intron 30.0%
TAGTGTCATCTAGTTAACAA+GGG - chr6_4:1987805-1987824 None:intergenic 30.0%
TTAGTGTCATCTAGTTAACA+AGG - chr6_4:1987806-1987825 None:intergenic 30.0%
AAAAGGAATATGTGTTGTGT+TGG - chr6_4:1987897-1987916 None:intergenic 30.0%
TCAAACAATATAGAAGTAGC+AGG - chr6_4:1987937-1987956 None:intergenic 30.0%
ACAAGAACTTAACAAGAATG+GGG - chr6_4:1987960-1987979 None:intergenic 30.0%
GACAAGAACTTAACAAGAAT+GGG - chr6_4:1987961-1987980 None:intergenic 30.0%
AGACAAGAACTTAACAAGAA+TGG - chr6_4:1987962-1987981 None:intergenic 30.0%
TTCATGTGGAAAATGAAACA+AGG - chr6_4:1988052-1988071 None:intergenic 30.0%
TATTGAATCAGTTCGCTAAA+TGG - chr6_4:1988094-1988113 None:intergenic 30.0%
AGTGGTACATTGTTTAACAT+TGG - chr6_4:1988147-1988166 None:intergenic 30.0%
ATGAAAAGAGATTAGTAAGG+CGG - chr6_4:1988299-1988318 None:intergenic 30.0%
GTGATGAAAAGAGATTAGTA+AGG - chr6_4:1988302-1988321 None:intergenic 30.0%
!! ATAATCCTTTGATTTGCATG+GGG - chr6_4:1988546-1988565 None:intergenic 30.0%
!! GATAATCCTTTGATTTGCAT+GGG - chr6_4:1988547-1988566 None:intergenic 30.0%
!! TGATAATCCTTTGATTTGCA+TGG - chr6_4:1988548-1988567 None:intergenic 30.0%
! AATGCAAAGATCAAAGGTTT+TGG - chr6_4:1988592-1988611 None:intergenic 30.0%
AGATTCAATAGTAGAAAGAG+CGG - chr6_4:1988637-1988656 None:intergenic 30.0%
ACATAATATAATGCAAGCCA+AGG - chr6_4:1988747-1988766 None:intergenic 30.0%
!! TCTCCATTTTGTTTGTTACA+TGG + chr6_4:1988795-1988814 Msa0970480:intron 30.0%
!! CTCCATTTTGTTTGTTACAT+GGG + chr6_4:1988796-1988815 Msa0970480:intron 30.0%
TTCCCATGTAACAAACAAAA+TGG - chr6_4:1988801-1988820 None:intergenic 30.0%
AAATTGTTTCAGAGGTCAAA+TGG + chr6_4:1988917-1988936 Msa0970480:intron 30.0%
AATTGTTTCAGAGGTCAAAT+GGG + chr6_4:1988918-1988937 Msa0970480:intron 30.0%
AACTGCTACATTATTCTTCT+TGG - chr6_4:1989006-1989025 None:intergenic 30.0%
TCTGAACAACAATGAAAATG+TGG + chr6_4:1989037-1989056 Msa0970480:CDS 30.0%
AACAACAATGAAAATGTGGT+TGG + chr6_4:1989041-1989060 Msa0970480:CDS 30.0%
! TACAGATTTTATAGAAGGTC+AGG + chr6_4:1989242-1989261 Msa0970480:CDS 30.0%
GCTTCTATATATTGGAATTG+AGG + chr6_4:1989386-1989405 Msa0970480:three_prime_UTR 30.0%
!! GTGTTGTTGTTTGATTGAAA+AGG + chr6_4:1987037-1987056 Msa0970480:five_prime_UTR 30.0%
!! GTTGTTGTTTGATTGAAAAG+GGG + chr6_4:1987039-1987058 Msa0970480:five_prime_UTR 30.0%
!!! TAGCTTTTTCGATGATGTTA+TGG + chr6_4:1987083-1987102 Msa0970480:exon 30.0%
TTATGGTGAGTTGTAAATCA+TGG + chr6_4:1987100-1987119 Msa0970480:exon 30.0%
TATGGTGAGTTGTAAATCAT+GGG + chr6_4:1987101-1987120 Msa0970480:exon 30.0%
!! TATATTTTTGTGTGTGCTCA+TGG + chr6_4:1987156-1987175 Msa0970480:CDS 30.0%
ATGGAAAAATTATGGGTCAT+TGG + chr6_4:1987343-1987362 Msa0970480:CDS 30.0%
!! GATCCTCTTATTTGTTATGA+AGG + chr6_4:1987389-1987408 Msa0970480:intron 30.0%
AACCCCTGATATTTAATTAC+AGG + chr6_4:1987437-1987456 Msa0970480:intron 30.0%
TAGTGTCATCTAGTTAACAA+GGG - chr6_4:1987805-1987824 None:intergenic 30.0%
TTAGTGTCATCTAGTTAACA+AGG - chr6_4:1987806-1987825 None:intergenic 30.0%
AAAAGGAATATGTGTTGTGT+TGG - chr6_4:1987897-1987916 None:intergenic 30.0%
TCAAACAATATAGAAGTAGC+AGG - chr6_4:1987937-1987956 None:intergenic 30.0%
ACAAGAACTTAACAAGAATG+GGG - chr6_4:1987960-1987979 None:intergenic 30.0%
GACAAGAACTTAACAAGAAT+GGG - chr6_4:1987961-1987980 None:intergenic 30.0%
AGACAAGAACTTAACAAGAA+TGG - chr6_4:1987962-1987981 None:intergenic 30.0%
TTCATGTGGAAAATGAAACA+AGG - chr6_4:1988052-1988071 None:intergenic 30.0%
TATTGAATCAGTTCGCTAAA+TGG - chr6_4:1988094-1988113 None:intergenic 30.0%
AGTGGTACATTGTTTAACAT+TGG - chr6_4:1988147-1988166 None:intergenic 30.0%
ATGAAAAGAGATTAGTAAGG+CGG - chr6_4:1988299-1988318 None:intergenic 30.0%
GTGATGAAAAGAGATTAGTA+AGG - chr6_4:1988302-1988321 None:intergenic 30.0%
!! ATAATCCTTTGATTTGCATG+GGG - chr6_4:1988546-1988565 None:intergenic 30.0%
!! GATAATCCTTTGATTTGCAT+GGG - chr6_4:1988547-1988566 None:intergenic 30.0%
!! TGATAATCCTTTGATTTGCA+TGG - chr6_4:1988548-1988567 None:intergenic 30.0%
! AATGCAAAGATCAAAGGTTT+TGG - chr6_4:1988592-1988611 None:intergenic 30.0%
AGATTCAATAGTAGAAAGAG+CGG - chr6_4:1988637-1988656 None:intergenic 30.0%
ACATAATATAATGCAAGCCA+AGG - chr6_4:1988747-1988766 None:intergenic 30.0%
!! TCTCCATTTTGTTTGTTACA+TGG + chr6_4:1988795-1988814 Msa0970480:intron 30.0%
!! CTCCATTTTGTTTGTTACAT+GGG + chr6_4:1988796-1988815 Msa0970480:intron 30.0%
TTCCCATGTAACAAACAAAA+TGG - chr6_4:1988801-1988820 None:intergenic 30.0%
AAATTGTTTCAGAGGTCAAA+TGG + chr6_4:1988917-1988936 Msa0970480:intron 30.0%
AATTGTTTCAGAGGTCAAAT+GGG + chr6_4:1988918-1988937 Msa0970480:intron 30.0%
AACTGCTACATTATTCTTCT+TGG - chr6_4:1989006-1989025 None:intergenic 30.0%
TCTGAACAACAATGAAAATG+TGG + chr6_4:1989037-1989056 Msa0970480:CDS 30.0%
AACAACAATGAAAATGTGGT+TGG + chr6_4:1989041-1989060 Msa0970480:CDS 30.0%
! TACAGATTTTATAGAAGGTC+AGG + chr6_4:1989242-1989261 Msa0970480:CDS 30.0%
GCTTCTATATATTGGAATTG+AGG + chr6_4:1989386-1989405 Msa0970480:three_prime_UTR 30.0%
ATATCCGATCTTTCAATCCT+CGG - chr6_4:1987251-1987270 None:intergenic 35.0%
! GAAAGATCGGATATCAGTTT+TGG + chr6_4:1987257-1987276 Msa0970480:CDS 35.0%
!! GTTTTGGCATGTTCTCATAT+TGG + chr6_4:1987273-1987292 Msa0970480:CDS 35.0%
! ATAATTTTTCCATCTGGTCC+AGG - chr6_4:1987336-1987355 None:intergenic 35.0%
TGGACCAGATGGAAAAATTA+TGG + chr6_4:1987335-1987354 Msa0970480:CDS 35.0%
GGACCAGATGGAAAAATTAT+GGG + chr6_4:1987336-1987355 Msa0970480:CDS 35.0%
! TGACCCATAATTTTTCCATC+TGG - chr6_4:1987342-1987361 None:intergenic 35.0%
GAGAGGTCATACAAAAACTA+TGG + chr6_4:1987518-1987537 Msa0970480:CDS 35.0%
AGGTCATACAAAAACTATGG+AGG + chr6_4:1987521-1987540 Msa0970480:CDS 35.0%
ACAGCAATGCAACTAACAAA+TGG + chr6_4:1987706-1987725 Msa0970480:intron 35.0%
!! TGCCGATTTATGTTAGTTCA+TGG - chr6_4:1987740-1987759 None:intergenic 35.0%
TGGAGTAAGTGTGACAAAAA+AGG - chr6_4:1987914-1987933 None:intergenic 35.0%
AACAATATAGAAGTAGCAGG+TGG - chr6_4:1987934-1987953 None:intergenic 35.0%
GGAAAAAACAACAGTACTCA+AGG - chr6_4:1987991-1988010 None:intergenic 35.0%
GTAATGTATTACTAGTGGAG+TGG - chr6_4:1988012-1988031 None:intergenic 35.0%
TGGAAAATGAAACAAGGAGA+GGG - chr6_4:1988046-1988065 None:intergenic 35.0%
TGTTTAACATTGGCGTAATG+TGG - chr6_4:1988137-1988156 None:intergenic 35.0%
TGTTAAACAATGTACCACTG+TGG + chr6_4:1988148-1988167 Msa0970480:intron 35.0%
ATGTGAAATAAGCGTACTGT+AGG - chr6_4:1988344-1988363 None:intergenic 35.0%
CATTGAAGAATTGAGGGAAA+AGG - chr6_4:1988402-1988421 None:intergenic 35.0%
! GAGTAGCATTGAAGAATTGA+GGG - chr6_4:1988408-1988427 None:intergenic 35.0%
TCAATTCTTCAATGCTACTC+CGG + chr6_4:1988408-1988427 Msa0970480:intron 35.0%
CATATAGAGTGAATTTGGAC+CGG - chr6_4:1988430-1988449 None:intergenic 35.0%
TTCACTCTATATGATGTTGC+CGG + chr6_4:1988437-1988456 Msa0970480:intron 35.0%
ACAAGAAATTAGGGCATATC+CGG - chr6_4:1988459-1988478 None:intergenic 35.0%
! AGCAGGTTGACAAGAAATTA+GGG - chr6_4:1988468-1988487 None:intergenic 35.0%
! AAGCAGGTTGACAAGAAATT+AGG - chr6_4:1988469-1988488 None:intergenic 35.0%
GATTATCACACCTTTGTGTA+AGG + chr6_4:1988560-1988579 Msa0970480:intron 35.0%
TGGCTAAATGCAAAGATCAA+AGG - chr6_4:1988598-1988617 None:intergenic 35.0%
!! TATCAAACTAGTCTTCCACA+TGG + chr6_4:1988685-1988704 Msa0970480:intron 35.0%
GCTGTATGAAATTGTTTCAG+AGG + chr6_4:1988909-1988928 Msa0970480:intron 35.0%
ATTGTTTCAGAGGTCAAATG+GGG + chr6_4:1988919-1988938 Msa0970480:intron 35.0%
TTTGCTCAAAACTTGCAGTT+TGG - chr6_4:1989100-1989119 None:intergenic 35.0%
AGTGGAAACTGATAAAAAGC+AGG + chr6_4:1989124-1989143 Msa0970480:CDS 35.0%
GTGGAAACTGATAAAAAGCA+GGG + chr6_4:1989125-1989144 Msa0970480:CDS 35.0%
TGGAAACTGATAAAAAGCAG+GGG + chr6_4:1989126-1989145 Msa0970480:CDS 35.0%
ATATCCGATCTTTCAATCCT+CGG - chr6_4:1987251-1987270 None:intergenic 35.0%
! GAAAGATCGGATATCAGTTT+TGG + chr6_4:1987257-1987276 Msa0970480:CDS 35.0%
!! GTTTTGGCATGTTCTCATAT+TGG + chr6_4:1987273-1987292 Msa0970480:CDS 35.0%
! ATAATTTTTCCATCTGGTCC+AGG - chr6_4:1987336-1987355 None:intergenic 35.0%
TGGACCAGATGGAAAAATTA+TGG + chr6_4:1987335-1987354 Msa0970480:CDS 35.0%
GGACCAGATGGAAAAATTAT+GGG + chr6_4:1987336-1987355 Msa0970480:CDS 35.0%
! TGACCCATAATTTTTCCATC+TGG - chr6_4:1987342-1987361 None:intergenic 35.0%
GAGAGGTCATACAAAAACTA+TGG + chr6_4:1987518-1987537 Msa0970480:CDS 35.0%
AGGTCATACAAAAACTATGG+AGG + chr6_4:1987521-1987540 Msa0970480:CDS 35.0%
ACAGCAATGCAACTAACAAA+TGG + chr6_4:1987706-1987725 Msa0970480:intron 35.0%
!! TGCCGATTTATGTTAGTTCA+TGG - chr6_4:1987740-1987759 None:intergenic 35.0%
TGGAGTAAGTGTGACAAAAA+AGG - chr6_4:1987914-1987933 None:intergenic 35.0%
AACAATATAGAAGTAGCAGG+TGG - chr6_4:1987934-1987953 None:intergenic 35.0%
GGAAAAAACAACAGTACTCA+AGG - chr6_4:1987991-1988010 None:intergenic 35.0%
GTAATGTATTACTAGTGGAG+TGG - chr6_4:1988012-1988031 None:intergenic 35.0%
TGGAAAATGAAACAAGGAGA+GGG - chr6_4:1988046-1988065 None:intergenic 35.0%
TGTTTAACATTGGCGTAATG+TGG - chr6_4:1988137-1988156 None:intergenic 35.0%
TGTTAAACAATGTACCACTG+TGG + chr6_4:1988148-1988167 Msa0970480:intron 35.0%
ATGTGAAATAAGCGTACTGT+AGG - chr6_4:1988344-1988363 None:intergenic 35.0%
CATTGAAGAATTGAGGGAAA+AGG - chr6_4:1988402-1988421 None:intergenic 35.0%
! GAGTAGCATTGAAGAATTGA+GGG - chr6_4:1988408-1988427 None:intergenic 35.0%
TCAATTCTTCAATGCTACTC+CGG + chr6_4:1988408-1988427 Msa0970480:intron 35.0%
CATATAGAGTGAATTTGGAC+CGG - chr6_4:1988430-1988449 None:intergenic 35.0%
TTCACTCTATATGATGTTGC+CGG + chr6_4:1988437-1988456 Msa0970480:intron 35.0%
ACAAGAAATTAGGGCATATC+CGG - chr6_4:1988459-1988478 None:intergenic 35.0%
! AGCAGGTTGACAAGAAATTA+GGG - chr6_4:1988468-1988487 None:intergenic 35.0%
! AAGCAGGTTGACAAGAAATT+AGG - chr6_4:1988469-1988488 None:intergenic 35.0%
GATTATCACACCTTTGTGTA+AGG + chr6_4:1988560-1988579 Msa0970480:intron 35.0%
TGGCTAAATGCAAAGATCAA+AGG - chr6_4:1988598-1988617 None:intergenic 35.0%
!! TATCAAACTAGTCTTCCACA+TGG + chr6_4:1988685-1988704 Msa0970480:intron 35.0%
GCTGTATGAAATTGTTTCAG+AGG + chr6_4:1988909-1988928 Msa0970480:intron 35.0%
ATTGTTTCAGAGGTCAAATG+GGG + chr6_4:1988919-1988938 Msa0970480:intron 35.0%
TTTGCTCAAAACTTGCAGTT+TGG - chr6_4:1989100-1989119 None:intergenic 35.0%
AGTGGAAACTGATAAAAAGC+AGG + chr6_4:1989124-1989143 Msa0970480:CDS 35.0%
GTGGAAACTGATAAAAAGCA+GGG + chr6_4:1989125-1989144 Msa0970480:CDS 35.0%
TGGAAACTGATAAAAAGCAG+GGG + chr6_4:1989126-1989145 Msa0970480:CDS 35.0%
TGTTTGATTGAAAAGGGGCT+TGG + chr6_4:1987044-1987063 Msa0970480:five_prime_UTR 40.0%
GTGAGTTGTAAATCATGGGA+TGG + chr6_4:1987105-1987124 Msa0970480:CDS 40.0%
AGTTGTAAATCATGGGATGG+TGG + chr6_4:1987108-1987127 Msa0970480:CDS 40.0%
AATGAAGAAATTCAGCTCCG+AGG + chr6_4:1987231-1987250 Msa0970480:CDS 40.0%
TTGGCATGTTCTCATATTGG+TGG + chr6_4:1987276-1987295 Msa0970480:CDS 40.0%
! ATTGGTGGTCATAAGTATGC+TGG + chr6_4:1987291-1987310 Msa0970480:CDS 40.0%
AGTAAGGCAGGAACATCATT+AGG - chr6_4:1987478-1987497 None:intergenic 40.0%
! TTTTTGTATGACCTCTCCCT+TGG - chr6_4:1987515-1987534 None:intergenic 40.0%
! GTGTTTCTTTCTCGTGCTTT+TGG - chr6_4:1987783-1987802 None:intergenic 40.0%
! TGTGTTGTGTTGGTATCAAG+AGG - chr6_4:1987887-1987906 None:intergenic 40.0%
GTGGAAAATGAAACAAGGAG+AGG - chr6_4:1988047-1988066 None:intergenic 40.0%
!! TCGCTAAATGGTGTTGTGTA+GGG - chr6_4:1988082-1988101 None:intergenic 40.0%
!! TTCGCTAAATGGTGTTGTGT+AGG - chr6_4:1988083-1988102 None:intergenic 40.0%
GTACCACTGTGGTCATAAAA+TGG + chr6_4:1988159-1988178 Msa0970480:intron 40.0%
! TCACCATTTTATGACCACAG+TGG - chr6_4:1988165-1988184 None:intergenic 40.0%
TGAGTCGTACAGCTTTCAAA+CGG + chr6_4:1988215-1988234 Msa0970480:intron 40.0%
CTTGAGATTACGAAGGAGAA+TGG - chr6_4:1988266-1988285 None:intergenic 40.0%
AAGAATTGAGGGAAAAGGCT+TGG - chr6_4:1988397-1988416 None:intergenic 40.0%
! GGAGTAGCATTGAAGAATTG+AGG - chr6_4:1988409-1988428 None:intergenic 40.0%
!! TTGATTTGCATGGGGTTGAA+TGG - chr6_4:1988538-1988557 None:intergenic 40.0%
TTCAACCCCATGCAAATCAA+AGG + chr6_4:1988538-1988557 Msa0970480:intron 40.0%
TTGGATACGACCTTACACAA+AGG - chr6_4:1988573-1988592 None:intergenic 40.0%
!!! TAAGGAGTGTTTTGCATCCT+TGG + chr6_4:1988727-1988746 Msa0970480:intron 40.0%
CAACCTGTTGCTGAACTTAA+GGG + chr6_4:1988942-1988961 Msa0970480:CDS 40.0%
!! GAGCAGAACAAACTTGCTAA+TGG + chr6_4:1988972-1988991 Msa0970480:CDS 40.0%
AAGAAACCCCATTAACACCT+TGG - chr6_4:1989073-1989092 None:intergenic 40.0%
TGTTTGATTGAAAAGGGGCT+TGG + chr6_4:1987044-1987063 Msa0970480:five_prime_UTR 40.0%
GTGAGTTGTAAATCATGGGA+TGG + chr6_4:1987105-1987124 Msa0970480:CDS 40.0%
AGTTGTAAATCATGGGATGG+TGG + chr6_4:1987108-1987127 Msa0970480:CDS 40.0%
AATGAAGAAATTCAGCTCCG+AGG + chr6_4:1987231-1987250 Msa0970480:CDS 40.0%
TTGGCATGTTCTCATATTGG+TGG + chr6_4:1987276-1987295 Msa0970480:CDS 40.0%
! ATTGGTGGTCATAAGTATGC+TGG + chr6_4:1987291-1987310 Msa0970480:CDS 40.0%
AGTAAGGCAGGAACATCATT+AGG - chr6_4:1987478-1987497 None:intergenic 40.0%
! TTTTTGTATGACCTCTCCCT+TGG - chr6_4:1987515-1987534 None:intergenic 40.0%
! GTGTTTCTTTCTCGTGCTTT+TGG - chr6_4:1987783-1987802 None:intergenic 40.0%
! TGTGTTGTGTTGGTATCAAG+AGG - chr6_4:1987887-1987906 None:intergenic 40.0%
GTGGAAAATGAAACAAGGAG+AGG - chr6_4:1988047-1988066 None:intergenic 40.0%
!! TCGCTAAATGGTGTTGTGTA+GGG - chr6_4:1988082-1988101 None:intergenic 40.0%
!! TTCGCTAAATGGTGTTGTGT+AGG - chr6_4:1988083-1988102 None:intergenic 40.0%
GTACCACTGTGGTCATAAAA+TGG + chr6_4:1988159-1988178 Msa0970480:intron 40.0%
! TCACCATTTTATGACCACAG+TGG - chr6_4:1988165-1988184 None:intergenic 40.0%
TGAGTCGTACAGCTTTCAAA+CGG + chr6_4:1988215-1988234 Msa0970480:intron 40.0%
CTTGAGATTACGAAGGAGAA+TGG - chr6_4:1988266-1988285 None:intergenic 40.0%
AAGAATTGAGGGAAAAGGCT+TGG - chr6_4:1988397-1988416 None:intergenic 40.0%
! GGAGTAGCATTGAAGAATTG+AGG - chr6_4:1988409-1988428 None:intergenic 40.0%
!! TTGATTTGCATGGGGTTGAA+TGG - chr6_4:1988538-1988557 None:intergenic 40.0%
TTCAACCCCATGCAAATCAA+AGG + chr6_4:1988538-1988557 Msa0970480:intron 40.0%
TTGGATACGACCTTACACAA+AGG - chr6_4:1988573-1988592 None:intergenic 40.0%
!!! TAAGGAGTGTTTTGCATCCT+TGG + chr6_4:1988727-1988746 Msa0970480:intron 40.0%
CAACCTGTTGCTGAACTTAA+GGG + chr6_4:1988942-1988961 Msa0970480:CDS 40.0%
!! GAGCAGAACAAACTTGCTAA+TGG + chr6_4:1988972-1988991 Msa0970480:CDS 40.0%
AAGAAACCCCATTAACACCT+TGG - chr6_4:1989073-1989092 None:intergenic 40.0%
TTGATTGAAAAGGGGCTTGG+AGG + chr6_4:1987047-1987066 Msa0970480:five_prime_UTR 45.0%
TTGAGCTTGTCAATGAGCAC+AGG - chr6_4:1987213-1987232 None:intergenic 45.0%
AGCTCCGAGGATTGAAAGAT+CGG + chr6_4:1987244-1987263 Msa0970480:CDS 45.0%
ACATTTAGTCCTGGACCAGA+TGG + chr6_4:1987324-1987343 Msa0970480:CDS 45.0%
! ATGTGTTGGTCAAGTAAGGC+AGG - chr6_4:1987490-1987509 None:intergenic 45.0%
! GGCAATGTGTTGGTCAAGTA+AGG - chr6_4:1987494-1987513 None:intergenic 45.0%
ACTTGACCAACACATTGCCA+AGG + chr6_4:1987495-1987514 Msa0970480:CDS 45.0%
CTTGACCAACACATTGCCAA+GGG + chr6_4:1987496-1987515 Msa0970480:CDS 45.0%
CACACACACACACACACTAA+AGG + chr6_4:1987616-1987635 Msa0970480:intron 45.0%
ACACACACACTAAAGGCTCT+AGG + chr6_4:1987623-1987642 Msa0970480:intron 45.0%
TTATAGTCCCTGTGCTAAGC+AGG + chr6_4:1987681-1987700 Msa0970480:intron 45.0%
TGTAGGGAGACAAGTTCATG+TGG - chr6_4:1988066-1988085 None:intergenic 45.0%
TCAATAGCCATGTCTTCCGT+AGG + chr6_4:1988108-1988127 Msa0970480:intron 45.0%
TCAGCAGTGCAACATCTTCA+TGG - chr6_4:1988198-1988217 None:intergenic 45.0%
TTACTGTACCAGTGTGAAGC+AGG - chr6_4:1988485-1988504 None:intergenic 45.0%
TGCTTCACACTGGTACAGTA+AGG + chr6_4:1988484-1988503 Msa0970480:intron 45.0%
ATTTGCATGGGGTTGAATGG+TGG - chr6_4:1988535-1988554 None:intergenic 45.0%
AAAGAGCGGAAGTAAGTGTC+TGG - chr6_4:1988623-1988642 None:intergenic 45.0%
GTTCTGCGCAAACAATGTTG+TGG + chr6_4:1988834-1988853 Msa0970480:intron 45.0%
GCAACCTGTTGCTGAACTTA+AGG + chr6_4:1988941-1988960 Msa0970480:CDS 45.0%
! GCTGTTGCCAAGGTGTTAAT+GGG + chr6_4:1989063-1989082 Msa0970480:CDS 45.0%
! CTGTTGCCAAGGTGTTAATG+GGG + chr6_4:1989064-1989083 Msa0970480:CDS 45.0%
! TGCTAAAGCGCCAACAATAC+CGG - chr6_4:1989207-1989226 None:intergenic 45.0%
TTGATTGAAAAGGGGCTTGG+AGG + chr6_4:1987047-1987066 Msa0970480:five_prime_UTR 45.0%
TTGAGCTTGTCAATGAGCAC+AGG - chr6_4:1987213-1987232 None:intergenic 45.0%
AGCTCCGAGGATTGAAAGAT+CGG + chr6_4:1987244-1987263 Msa0970480:CDS 45.0%
ACATTTAGTCCTGGACCAGA+TGG + chr6_4:1987324-1987343 Msa0970480:CDS 45.0%
! ATGTGTTGGTCAAGTAAGGC+AGG - chr6_4:1987490-1987509 None:intergenic 45.0%
! GGCAATGTGTTGGTCAAGTA+AGG - chr6_4:1987494-1987513 None:intergenic 45.0%
ACTTGACCAACACATTGCCA+AGG + chr6_4:1987495-1987514 Msa0970480:CDS 45.0%
CTTGACCAACACATTGCCAA+GGG + chr6_4:1987496-1987515 Msa0970480:CDS 45.0%
CACACACACACACACACTAA+AGG + chr6_4:1987616-1987635 Msa0970480:intron 45.0%
ACACACACACTAAAGGCTCT+AGG + chr6_4:1987623-1987642 Msa0970480:intron 45.0%
TTATAGTCCCTGTGCTAAGC+AGG + chr6_4:1987681-1987700 Msa0970480:intron 45.0%
TGTAGGGAGACAAGTTCATG+TGG - chr6_4:1988066-1988085 None:intergenic 45.0%
TCAATAGCCATGTCTTCCGT+AGG + chr6_4:1988108-1988127 Msa0970480:intron 45.0%
TCAGCAGTGCAACATCTTCA+TGG - chr6_4:1988198-1988217 None:intergenic 45.0%
TTACTGTACCAGTGTGAAGC+AGG - chr6_4:1988485-1988504 None:intergenic 45.0%
TGCTTCACACTGGTACAGTA+AGG + chr6_4:1988484-1988503 Msa0970480:intron 45.0%
ATTTGCATGGGGTTGAATGG+TGG - chr6_4:1988535-1988554 None:intergenic 45.0%
AAAGAGCGGAAGTAAGTGTC+TGG - chr6_4:1988623-1988642 None:intergenic 45.0%
GTTCTGCGCAAACAATGTTG+TGG + chr6_4:1988834-1988853 Msa0970480:intron 45.0%
GCAACCTGTTGCTGAACTTA+AGG + chr6_4:1988941-1988960 Msa0970480:CDS 45.0%
! GCTGTTGCCAAGGTGTTAAT+GGG + chr6_4:1989063-1989082 Msa0970480:CDS 45.0%
! CTGTTGCCAAGGTGTTAATG+GGG + chr6_4:1989064-1989083 Msa0970480:CDS 45.0%
! TGCTAAAGCGCCAACAATAC+CGG - chr6_4:1989207-1989226 None:intergenic 45.0%
GGGCTTGGAGGAATCAAATG+TGG + chr6_4:1987059-1987078 Msa0970480:five_prime_UTR 50.0%
GGAGTGCAAGATGTGATAGC+AGG + chr6_4:1987129-1987148 Msa0970480:CDS 50.0%
! GCTGTTTCCTGCTTAGCACA+GGG - chr6_4:1987691-1987710 None:intergenic 50.0%
!! TGCTGTTTCCTGCTTAGCAC+AGG - chr6_4:1987692-1987711 None:intergenic 50.0%
TGGCGTAATGTGGCAACCTA+CGG - chr6_4:1988127-1988146 None:intergenic 50.0%
CTTGTCAACCTGCTTCACAC+TGG + chr6_4:1988474-1988493 Msa0970480:intron 50.0%
GCTCCCTTAAGTTCAGCAAC+AGG - chr6_4:1988948-1988967 None:intergenic 50.0%
! AATGTGGTTGGCTGTTGCCA+AGG + chr6_4:1989053-1989072 Msa0970480:CDS 50.0%
! GGCTGTTGCCAAGGTGTTAA+TGG + chr6_4:1989062-1989081 Msa0970480:CDS 50.0%
TAGGCCAACTCCCACATACT+TGG - chr6_4:1989154-1989173 None:intergenic 50.0%
CGCGATATTCTTGCAGCTAC+CGG + chr6_4:1989185-1989204 Msa0970480:CDS 50.0%
CTTGCAGCTACCGGTATTGT+TGG + chr6_4:1989194-1989213 Msa0970480:CDS 50.0%
GCTTTAGCAGCTGTTGCCAT+TGG + chr6_4:1989218-1989237 Msa0970480:CDS 50.0%
GGGCTTGGAGGAATCAAATG+TGG + chr6_4:1987059-1987078 Msa0970480:five_prime_UTR 50.0%
GGAGTGCAAGATGTGATAGC+AGG + chr6_4:1987129-1987148 Msa0970480:CDS 50.0%
! GCTGTTTCCTGCTTAGCACA+GGG - chr6_4:1987691-1987710 None:intergenic 50.0%
!! TGCTGTTTCCTGCTTAGCAC+AGG - chr6_4:1987692-1987711 None:intergenic 50.0%
TGGCGTAATGTGGCAACCTA+CGG - chr6_4:1988127-1988146 None:intergenic 50.0%
CTTGTCAACCTGCTTCACAC+TGG + chr6_4:1988474-1988493 Msa0970480:intron 50.0%
GCTCCCTTAAGTTCAGCAAC+AGG - chr6_4:1988948-1988967 None:intergenic 50.0%
! AATGTGGTTGGCTGTTGCCA+AGG + chr6_4:1989053-1989072 Msa0970480:CDS 50.0%
! GGCTGTTGCCAAGGTGTTAA+TGG + chr6_4:1989062-1989081 Msa0970480:CDS 50.0%
TAGGCCAACTCCCACATACT+TGG - chr6_4:1989154-1989173 None:intergenic 50.0%
CGCGATATTCTTGCAGCTAC+CGG + chr6_4:1989185-1989204 Msa0970480:CDS 50.0%
CTTGCAGCTACCGGTATTGT+TGG + chr6_4:1989194-1989213 Msa0970480:CDS 50.0%
GCTTTAGCAGCTGTTGCCAT+TGG + chr6_4:1989218-1989237 Msa0970480:CDS 50.0%
CCTCTCCCTTGGCAATGTGT+TGG - chr6_4:1987504-1987523 None:intergenic 55.0%
CCAACACATTGCCAAGGGAG+AGG + chr6_4:1987501-1987520 Msa0970480:CDS 55.0%
GTGGCAACCTACGGAAGACA+TGG - chr6_4:1988118-1988137 None:intergenic 55.0%
GCATGGGGTTGAATGGTGGT+GGG - chr6_4:1988531-1988550 None:intergenic 55.0%
TGCATGGGGTTGAATGGTGG+TGG - chr6_4:1988532-1988551 None:intergenic 55.0%
GCGGAAGTAAGTGTCTGGAG+TGG - chr6_4:1988618-1988637 None:intergenic 55.0%
AAGCAGGGGAGCCAAGTATG+TGG + chr6_4:1989140-1989159 Msa0970480:CDS 55.0%
AGCAGGGGAGCCAAGTATGT+GGG + chr6_4:1989141-1989160 Msa0970480:CDS 55.0%
GGAGCCAAGTATGTGGGAGT+TGG + chr6_4:1989147-1989166 Msa0970480:CDS 55.0%
AAGGTCAGGCTGAGAGCTTG+AGG + chr6_4:1989256-1989275 Msa0970480:exon 55.0%
AGGTCAGGCTGAGAGCTTGA+GGG + chr6_4:1989257-1989276 Msa0970480:exon 55.0%
CCTCTCCCTTGGCAATGTGT+TGG - chr6_4:1987504-1987523 None:intergenic 55.0%
CCAACACATTGCCAAGGGAG+AGG + chr6_4:1987501-1987520 Msa0970480:CDS 55.0%
GTGGCAACCTACGGAAGACA+TGG - chr6_4:1988118-1988137 None:intergenic 55.0%
GCATGGGGTTGAATGGTGGT+GGG - chr6_4:1988531-1988550 None:intergenic 55.0%
TGCATGGGGTTGAATGGTGG+TGG - chr6_4:1988532-1988551 None:intergenic 55.0%
GCGGAAGTAAGTGTCTGGAG+TGG - chr6_4:1988618-1988637 None:intergenic 55.0%
AAGCAGGGGAGCCAAGTATG+TGG + chr6_4:1989140-1989159 Msa0970480:CDS 55.0%
AGCAGGGGAGCCAAGTATGT+GGG + chr6_4:1989141-1989160 Msa0970480:CDS 55.0%
GGAGCCAAGTATGTGGGAGT+TGG + chr6_4:1989147-1989166 Msa0970480:CDS 55.0%
AAGGTCAGGCTGAGAGCTTG+AGG + chr6_4:1989256-1989275 Msa0970480:exon 55.0%
AGGTCAGGCTGAGAGCTTGA+GGG + chr6_4:1989257-1989276 Msa0970480:exon 55.0%
ACGCGAGGTGCGGTGTTTGT+GGG + chr6_4:1987187-1987206 Msa0970480:CDS 60.0%
ACGCGAGGTGCGGTGTTTGT+GGG + chr6_4:1987187-1987206 Msa0970480:CDS 60.0%
CTCATGGAAGTCGCGACGCG+AGG + chr6_4:1987172-1987191 Msa0970480:CDS 65.0%
GACGCGAGGTGCGGTGTTTG+TGG + chr6_4:1987186-1987205 Msa0970480:CDS 65.0%
CTCATGGAAGTCGCGACGCG+AGG + chr6_4:1987172-1987191 Msa0970480:CDS 65.0%
GACGCGAGGTGCGGTGTTTG+TGG + chr6_4:1987186-1987205 Msa0970480:CDS 65.0%
GGAAGTCGCGACGCGAGGTG+CGG + chr6_4:1987177-1987196 Msa0970480:CDS 70.0%
GGAAGTCGCGACGCGAGGTG+CGG + chr6_4:1987177-1987196 Msa0970480:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 1986980 1989413 1986980 ID=Msa0970480;Name=Msa0970480
chr6_4 mRNA 1986980 1989413 1986980 ID=Msa0970480-mRNA-1;Parent=Msa0970480;Name=Msa0970480-mRNA-1;_AED=0.05;_eAED=0.05;_QI=122|1|1|1|1|1|3|145|228
chr6_4 exon 1986980 1987364 1986980 ID=Msa0970480-mRNA-1:exon:915;Parent=Msa0970480-mRNA-1
chr6_4 exon 1987459 1987542 1987459 ID=Msa0970480-mRNA-1:exon:916;Parent=Msa0970480-mRNA-1
chr6_4 exon 1988929 1989413 1988929 ID=Msa0970480-mRNA-1:exon:917;Parent=Msa0970480-mRNA-1
chr6_4 five_prime_UTR 1986980 1987101 1986980 ID=Msa0970480-mRNA-1:five_prime_utr;Parent=Msa0970480-mRNA-1
chr6_4 CDS 1987102 1987364 1987102 ID=Msa0970480-mRNA-1:cds;Parent=Msa0970480-mRNA-1
chr6_4 CDS 1987459 1987542 1987459 ID=Msa0970480-mRNA-1:cds;Parent=Msa0970480-mRNA-1
chr6_4 CDS 1988929 1989268 1988929 ID=Msa0970480-mRNA-1:cds;Parent=Msa0970480-mRNA-1
chr6_4 three_prime_UTR 1989269 1989413 1989269 ID=Msa0970480-mRNA-1:three_prime_utr;Parent=Msa0970480-mRNA-1
Gene Sequence

>Msa0970480

ATGGTGAGTTGTAAATCATGGGATGGTGGAGTGCAAGATGTGATAGCAGGTTCATATATTTTTGTGTGTGCTCATGGAAGTCGCGACGCGAGGTGCGGTGTTTGTGGGCCTGTGCTCATTGACAAGCTCAATGAAGAAATTCAGCTCCGAGGATTGAAAGATCGGATATCAGTTTTGGCATGTTCTCATATTGGTGGTCATAAGTATGCTGGCAATTTAATCACATTTAGTCCTGGACCAGATGGAAAAATTATGGGTCATTGGTATGGCTATGTTACTCCTAATGATGTTCCTGCCTTACTTGACCAACACATTGCCAAGGGAGAGGTCATACAAAAACTATGGAGAGGTCAAATGGGGCAACCTGTTGCTGAACTTAAGGGAGCAGATGAGCAGAACAAACTTGCTAATGGAAATGATACCAAGAAGAATAATGTAGCAGTTGAAAGTGACTCTCTGAACAACAATGAAAATGTGGTTGGCTGTTGCCAAGGTGTTAATGGGGTTTCTTGTTGCCAAACTGCAAGTTTTGAGCAAAAAAAAGTGGAAACTGATAAAAAGCAGGGGAGCCAAGTATGTGGGAGTTGGCCTATATTACAAAAACGCGATATTCTTGCAGCTACCGGTATTGTTGGCGCTTTAGCAGCTGTTGCCATTGGTTACAGATTTTATAGAAGGTCAGGCTGA

Protein sequence

>Msa0970480

MVSCKSWDGGVQDVIAGSYIFVCAHGSRDARCGVCGPVLIDKLNEEIQLRGLKDRISVLACSHIGGHKYAGNLITFSPGPDGKIMGHWYGYVTPNDVPALLDQHIAKGEVIQKLWRGQMGQPVAELKGADEQNKLANGNDTKKNNVAVESDSLNNNENVVGCCQGVNGVSCCQTASFEQKKVETDKKQGSQVCGSWPILQKRDILAATGIVGALAAVAIGYRFYRRSG*