AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1359920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1359920 MtrunA17_Chr4g0061811 94.588 425 21 2 1 425 1 423 0.0 801
Msa1359920 MtrunA17_Chr6g0456041 35.197 304 140 7 133 423 76 335 8.97e-35 132
Msa1359920 MtrunA17_Chr7g0245341 46.087 115 62 0 303 417 286 400 1.62e-30 123
Msa1359920 MtrunA17_Chr6g0481701 45.528 123 67 0 294 416 167 289 2.11e-30 120
Msa1359920 MtrunA17_Chr1g0212081 43.478 138 69 4 283 414 182 316 1.08e-29 117
Msa1359920 MtrunA17_Chr1g0211891 47.899 119 59 1 301 416 130 248 9.79e-29 114
Msa1359920 MtrunA17_Chr2g0328531 39.640 111 63 3 309 416 134 243 5.38e-23 99.4
Msa1359920 MtrunA17_Chr4g0031931 42.308 104 56 3 309 409 126 228 3.21e-21 94.7
Msa1359920 MtrunA17_Chr3g0121201 36.522 115 63 2 305 415 186 294 2.27e-19 89.0
Msa1359920 MtrunA17_Chr5g0441191 36.190 105 64 2 303 407 144 245 9.39e-18 84.0
Msa1359920 MtrunA17_Chr3g0112071 47.500 80 33 2 335 410 170 244 1.58e-17 84.0
Msa1359920 MtrunA17_Chr1g0171791 33.621 116 71 3 305 420 105 214 5.48e-17 80.5
Msa1359920 MtrunA17_Chr3g0114781 34.259 108 68 2 303 410 165 269 6.18e-17 81.6
Msa1359920 MtrunA17_Chr5g0417501 40.217 92 49 2 323 412 78 165 1.28e-16 78.6
Msa1359920 MtrunA17_Chr1g0150571 40.244 82 47 1 335 414 204 285 4.10e-16 79.0
Msa1359920 MtrunA17_Chr5g0435561 44.000 75 41 1 336 410 168 241 1.24e-15 78.2
Msa1359920 MtrunA17_Chr1g0181921 46.667 75 35 1 337 411 189 258 1.78e-15 76.3
Msa1359920 MtrunA17_Chr2g0308971 58.824 51 21 0 354 404 101 151 2.13e-15 75.1
Msa1359920 MtrunA17_Chr2g0278071 52.308 65 30 1 342 406 239 302 2.83e-15 77.0
Msa1359920 MtrunA17_Chr3g0093621 29.333 150 97 5 265 407 88 235 6.11e-15 74.7
Msa1359920 MtrunA17_Chr6g0461611 27.273 110 72 3 305 412 183 286 2.84e-13 70.5
Msa1359920 MtrunA17_Chr3g0086801 41.667 72 41 1 332 403 76 146 2.82e-12 64.3
Msa1359920 MtrunA17_Chr1g0169651 36.264 91 51 3 316 406 644 727 3.86e-12 68.2
Msa1359920 MtrunA17_Chr2g0316591 47.917 48 25 0 362 409 253 300 4.35e-12 67.0
Msa1359920 MtrunA17_Chr3g0120011 44.286 70 37 2 338 406 96 164 5.50e-12 65.1
Msa1359920 MtrunA17_Chr8g0345401 43.860 57 31 1 362 417 49 105 2.48e-11 61.6
Msa1359920 MtrunA17_Chr3g0124731 41.892 74 40 2 336 409 166 236 3.77e-11 63.2
Msa1359920 MtrunA17_Chr4g0027761 46.970 66 31 3 340 404 104 166 5.59e-11 61.6
Msa1359920 MtrunA17_Chr3g0089261 43.836 73 32 3 336 408 279 342 5.67e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1359920 AT5G60820.1 34.624 439 207 16 8 409 24 419 1.04e-52 182
Msa1359920 AT5G08139.1 39.918 243 110 6 182 418 153 365 3.67e-44 158
Msa1359920 AT5G15820.1 52.941 102 48 0 316 417 245 346 7.47e-33 127
Msa1359920 AT3G02340.1 35.739 291 144 11 132 418 140 391 8.06e-33 128
Msa1359920 AT3G02340.2 35.739 291 144 11 132 418 140 391 8.06e-33 128
Msa1359920 AT3G19950.1 45.946 111 60 0 306 416 160 270 1.44e-27 112
Msa1359920 AT3G19950.2 45.946 111 60 0 306 416 218 328 3.52e-27 112
Msa1359920 AT3G19950.3 45.946 111 60 0 306 416 218 328 3.52e-27 112
Msa1359920 AT5G01980.1 43.697 119 66 1 303 421 292 409 8.31e-27 112
Msa1359920 AT1G55530.1 33.557 149 87 3 268 411 131 272 6.99e-22 96.7
Msa1359920 AT1G55530.2 33.557 149 87 3 268 411 131 272 6.99e-22 96.7
Msa1359920 AT5G64920.1 39.597 149 80 5 278 417 167 314 8.22e-22 96.3
Msa1359920 AT1G55530.3 37.736 106 60 1 306 411 140 239 1.81e-21 94.7
Msa1359920 AT2G40830.1 38.835 103 62 1 306 408 135 236 2.43e-21 94.7
Msa1359920 AT2G40830.3 38.835 103 62 1 306 408 135 236 2.43e-21 94.7
Msa1359920 AT2G40830.4 38.835 103 62 1 306 408 135 236 2.43e-21 94.7
Msa1359920 AT2G40830.2 38.835 103 62 1 306 408 135 236 2.43e-21 94.7
Msa1359920 AT3G56580.3 34.328 134 82 3 274 407 104 231 1.78e-20 92.0
Msa1359920 AT3G56580.1 34.328 134 82 3 274 407 104 231 1.78e-20 92.0
Msa1359920 AT3G56580.2 34.328 134 82 3 274 407 104 231 1.78e-20 92.0
Msa1359920 AT1G68180.1 44.248 113 54 4 296 405 75 181 4.95e-20 89.0
Msa1359920 AT3G13430.4 35.965 114 67 2 306 418 173 281 1.34e-18 86.7
Msa1359920 AT3G13430.3 35.965 114 67 2 306 418 173 281 1.34e-18 86.7
Msa1359920 AT3G13430.1 35.965 114 67 2 306 418 173 281 1.34e-18 86.7
Msa1359920 AT3G13430.2 35.965 114 67 2 306 418 173 281 1.34e-18 86.7
Msa1359920 AT5G20910.1 43.902 82 44 1 335 414 201 282 1.96e-18 85.9
Msa1359920 AT1G60360.1 44.578 83 46 0 335 417 197 279 1.97e-18 86.3
Msa1359920 AT3G46620.1 48.718 78 39 1 332 409 186 262 5.47e-18 85.9
Msa1359920 AT3G10815.1 41.860 86 47 2 335 420 95 177 7.96e-18 82.0
Msa1359920 AT2G39720.1 45.455 77 41 1 335 410 173 249 3.62e-17 83.2
Msa1359920 AT2G39720.2 45.455 77 41 1 335 410 173 249 3.62e-17 83.2
Msa1359920 AT4G26400.2 34.783 115 66 2 310 424 195 300 6.38e-17 82.0
Msa1359920 AT4G26400.1 34.783 115 66 2 310 424 195 300 6.38e-17 82.0
Msa1359920 AT1G26800.1 38.824 85 47 1 333 417 89 168 9.01e-17 79.0
Msa1359920 AT5G56340.1 34.906 106 63 1 303 408 206 305 1.47e-16 81.6
Msa1359920 AT5G59550.1 44.872 78 42 1 332 409 170 246 3.10e-16 80.5
Msa1359920 AT3G60080.1 47.222 72 37 1 338 408 144 215 3.15e-16 79.3
Msa1359920 AT5G59550.2 44.872 78 42 1 332 409 275 351 4.12e-16 80.9
Msa1359920 AT1G14200.1 41.333 75 43 1 333 407 81 154 4.42e-15 73.6
Msa1359920 AT2G44330.1 50.980 51 25 0 362 412 96 146 1.05e-14 72.4
Msa1359920 AT3G30460.1 40.909 88 47 2 317 403 55 138 3.38e-14 70.1
Msa1359920 AT3G30460.2 40.909 88 47 2 317 403 91 174 6.56e-14 70.1
Msa1359920 AT5G02750.1 44.615 65 35 1 362 425 214 278 3.72e-13 70.1
Msa1359920 AT1G04790.1 40.299 67 37 1 337 403 567 630 1.80e-11 66.6
Msa1359920 AT1G22670.1 40.625 64 36 2 342 403 211 274 2.78e-11 65.5
Msa1359920 AT2G29840.1 29.091 110 76 2 302 410 184 292 8.34e-11 63.2
Msa1359920 AT1G71980.1 38.462 65 38 2 341 403 210 274 8.99e-11 63.9
Msa1359920 AT1G35630.1 46.939 49 25 1 356 403 227 275 9.89e-11 63.2

Find 107 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTAATCCCTTTACCTTAT+TGG 0.055693 tig0016833:+8004 Msa1359920:CDS
GTGATTTCAGAGCCTGATTT+TGG 0.169345 tig0016833:+8840 Msa1359920:CDS
GACAGTTTAAGTTTCGATTT+AGG 0.208807 tig0016833:+8216 Msa1359920:CDS
GAAATCACATGATAAGTTTC+AGG 0.233474 tig0016833:-8825 None:intergenic
TTATGCCTTGGTTGGGGATT+AGG 0.241740 tig0016833:+9111 Msa1359920:CDS
ACAGTTTAAGTTTCGATTTA+GGG 0.277887 tig0016833:+8217 Msa1359920:CDS
GTTGTGATTGGATGGGAATT+CGG 0.300414 tig0016833:-8076 None:intergenic
GCCAATAAGGTAAAGGGATT+AGG 0.319581 tig0016833:-8005 None:intergenic
GTTACTATGTTGAGGGTAGA+TGG 0.329877 tig0016833:+8726 Msa1359920:CDS
TCGTTTAACGATTGATGAAT+TGG 0.332153 tig0016833:-8183 None:intergenic
CCAATAAGGTAAAGGGATTA+GGG 0.339692 tig0016833:-8004 None:intergenic
TTTGATGATAGGGAAATTCT+TGG 0.340057 tig0016833:+8579 Msa1359920:CDS
AAAGCGGTGGTTGTTGTGAT+TGG 0.354372 tig0016833:-8088 None:intergenic
TACAGAAGCCGGTGGCTTAC+TGG 0.359157 tig0016833:-8940 None:intergenic
ATTCTTGGTTTGATGTTTGC+TGG 0.360137 tig0016833:+8594 Msa1359920:CDS
AGTAACAATAGGTCTGTTAA+TGG 0.366047 tig0016833:+8633 Msa1359920:CDS
TTGTGATTGGATGGGAATTC+GGG 0.380919 tig0016833:-8075 None:intergenic
GATCTAGAAACCGTAATATC+AGG 0.385009 tig0016833:-8303 None:intergenic
TTTGAGTGGGAGGAAGTTGA+TGG 0.386369 tig0016833:+8549 Msa1359920:CDS
GATTGTATTATGCCTTGGTT+GGG 0.400381 tig0016833:+9104 Msa1359920:CDS
ATGGTGGTGGCTTTGATGAT+AGG 0.400699 tig0016833:+8568 Msa1359920:CDS
GTAATTGAGGAAGAAGAAAT+CGG 0.403339 tig0016833:+8465 Msa1359920:CDS
TCATCATTGTCCCCAAAATC+AGG 0.416729 tig0016833:-8852 None:intergenic
AAGTGCTCCGAGCCAACATT+GGG 0.417324 tig0016833:-9199 None:intergenic
TCGGAAGTGGAAGGCCAATA+AGG 0.419335 tig0016833:-8018 None:intergenic
ACAATACGTAAACCGTCAAT+TGG 0.423490 tig0016833:-8330 None:intergenic
TCAAAATCCTCGTAAATTTG+AGG 0.425794 tig0016833:-8531 None:intergenic
GGTGAAGAAGTTGATAGAAA+TGG 0.434719 tig0016833:+8375 Msa1359920:CDS
ATGACGAAAACAGTAACAAT+AGG 0.435849 tig0016833:+8622 Msa1359920:CDS
GAGATTGTTCAACGCGTTGT+TGG 0.452185 tig0016833:-8140 None:intergenic
TGGGAGGAAGTTGATGGTGG+TGG 0.457851 tig0016833:+8555 Msa1359920:CDS
GAAACTTAAACTGTCGAAAA+CGG 0.459293 tig0016833:-8208 None:intergenic
GGAAACTCACAGCGACAAAC+AGG 0.463610 tig0016833:-9143 None:intergenic
ACGTATTGTTGAGATTGATT+CGG 0.464900 tig0016833:+8344 Msa1359920:CDS
TTGGGATTCGCTTCAGTTGG+AGG 0.465065 tig0016833:+8503 Msa1359920:CDS
ATCGAAGTCGAGATCGGAAG+TGG 0.465457 tig0016833:-8031 None:intergenic
TCGTTGGGATTCGCTTCAGT+TGG 0.470738 tig0016833:+8500 Msa1359920:CDS
CGGTGGTTGTTGTGATTGGA+TGG 0.471139 tig0016833:-8084 None:intergenic
AGAAGAGGTTACTATGTTGA+GGG 0.481328 tig0016833:+8719 Msa1359920:CDS
TCTAGATCTGATCCAATTGA+CGG 0.487333 tig0016833:+8318 Msa1359920:CDS
TGATTGTATTATGCCTTGGT+TGG 0.494779 tig0016833:+9103 Msa1359920:CDS
CAAGTGCTCCGAGCCAACAT+TGG 0.495300 tig0016833:-9200 None:intergenic
GAGAAGAGGTTAACATGATG+AGG 0.499839 tig0016833:+8748 Msa1359920:CDS
GAAGTTGATAGAAATGGAAA+CGG 0.501457 tig0016833:+8381 Msa1359920:CDS
GAGGGACGGAAAATCTTGAT+TGG 0.501577 tig0016833:+8778 Msa1359920:CDS
GAGTGGGAGGAAGTTGATGG+TGG 0.503222 tig0016833:+8552 Msa1359920:CDS
TTTGATCATCGTCGGGTTCG+TGG 0.503631 tig0016833:-7981 None:intergenic
GAAGAACACGAGGAAGAAGA+TGG 0.504834 tig0016833:+8696 Msa1359920:CDS
TTCGTTTACCAGTAAGCCAC+CGG 0.508581 tig0016833:+8932 Msa1359920:CDS
CATCGTCGGGTTCGTGGTGG+TGG 0.509457 tig0016833:-7975 None:intergenic
GAGAAGAGGTTACTATGTTG+AGG 0.509668 tig0016833:+8718 Msa1359920:CDS
TGTAAAGATGAATTTGCTGT+TGG 0.511059 tig0016833:+9038 Msa1359920:CDS
TAATTGAGGAAGAAGAAATC+GGG 0.511251 tig0016833:+8466 Msa1359920:CDS
ATCGAAATCGAAGTCGAGAT+CGG 0.514526 tig0016833:-8037 None:intergenic
ATGGTGATTGTATTATGCCT+TGG 0.516094 tig0016833:+9099 Msa1359920:CDS
GATTAGGGTTTGATCATCGT+CGG 0.516282 tig0016833:-7989 None:intergenic
GCAGAGTATGAGATGATGTT+TGG 0.518188 tig0016833:+8888 Msa1359920:CDS
TGGAAGGCCAATAAGGTAAA+GGG 0.521455 tig0016833:-8011 None:intergenic
GTGGAAGGCCAATAAGGTAA+AGG 0.522983 tig0016833:-8012 None:intergenic
ATTAGGGTTTGATCATCGTC+GGG 0.526063 tig0016833:-7988 None:intergenic
GTTAACATGATGAGGGTTGG+TGG 0.530615 tig0016833:+8756 Msa1359920:CDS
CCGTGTTCTCATCGATATCA+TGG 0.534029 tig0016833:+9080 Msa1359920:CDS
GTGGTGGTGACGACGGAGAT+AGG 0.542254 tig0016833:-7959 None:intergenic
GATGATGTTTGGTCAATTCG+CGG 0.544306 tig0016833:+8899 Msa1359920:CDS
TGGTGGTGGCTTTGATGATA+GGG 0.550462 tig0016833:+8569 Msa1359920:CDS
GTTGAGGGTAGATGGAGAAG+AGG 0.551302 tig0016833:+8734 Msa1359920:CDS
TCAACAAACGCTACAGAAGC+CGG 0.552415 tig0016833:-8951 None:intergenic
AACATGATGAGGGTTGGTGG+AGG 0.553873 tig0016833:+8759 Msa1359920:CDS
TGTTGAGAATCTTCCGTCGG+TGG 0.555357 tig0016833:+8968 Msa1359920:CDS
GATGAGGGTTGGTGGAGGGA+CGG 0.555436 tig0016833:+8764 Msa1359920:CDS
ATTGTATTATGCCTTGGTTG+GGG 0.561288 tig0016833:+9105 Msa1359920:CDS
AGAAGAGGTTAACATGATGA+GGG 0.567261 tig0016833:+8749 Msa1359920:CDS
CGAGGAAGAAGATGGAGAAG+AGG 0.574787 tig0016833:+8704 Msa1359920:CDS
CAAAATTCTCGCGAGAAAAG+CGG 0.575996 tig0016833:-8104 None:intergenic
AGATAGGTTACATCAGCCAT+TGG 0.576448 tig0016833:-7943 None:intergenic
TGAATTTGCTGTTGGAGAAG+AGG 0.578557 tig0016833:+9046 Msa1359920:CDS
ATTGGATGGGAATTCGGGAT+CGG 0.580804 tig0016833:-8070 None:intergenic
GAGGTTAACATGATGAGGGT+TGG 0.581773 tig0016833:+8753 Msa1359920:CDS
GGAAAGCCCCAATGTTGGCT+CGG 0.582098 tig0016833:+9192 Msa1359920:CDS
ATGATAAGTTTCAGGACTTG+CGG 0.583376 tig0016833:-8817 None:intergenic
GAGATTGATTCGGATTCTGA+TGG 0.594668 tig0016833:+8354 Msa1359920:CDS
CCATGATATCGATGAGAACA+CGG 0.599495 tig0016833:-9080 None:intergenic
TAACGATTGATGAATTGGAT+CGG 0.599577 tig0016833:-8178 None:intergenic
TCATAATCAGCATCATCAGT+AGG 0.603013 tig0016833:-9164 None:intergenic
GTTAATGGTGGTCGTCCTCG+CGG 0.603165 tig0016833:+8648 Msa1359920:CDS
AAGTCGAGATCGGAAGTGGA+AGG 0.605500 tig0016833:-8027 None:intergenic
GGTTGTGACTAAAGAGGACG+TGG 0.612162 tig0016833:+8989 Msa1359920:CDS
GGTGGTTGTTGTGATTGGAT+GGG 0.617275 tig0016833:-8083 None:intergenic
AGATCGAGATGAATGTCGGA+AGG 0.622305 tig0016833:-8246 None:intergenic
GTCGGTGGTTGTGACTAAAG+AGG 0.623252 tig0016833:+8983 Msa1359920:CDS
ATTGAGATCGAGATGAATGT+CGG 0.624810 tig0016833:-8250 None:intergenic
GTTCGTGGTGGTGGTGACGA+CGG 0.628066 tig0016833:-7966 None:intergenic
AACAATAGGTCTGTTAATGG+TGG 0.633442 tig0016833:+8636 Msa1359920:CDS
ACATGATGAGGGTTGGTGGA+GGG 0.638721 tig0016833:+8760 Msa1359920:CDS
TCTTTAGTCACAACCACCGA+CGG 0.649000 tig0016833:-8981 None:intergenic
GTTTGTTGAGAATCTTCCGT+CGG 0.653060 tig0016833:+8965 Msa1359920:CDS
ACGTAGGAAAGCCCCAATGT+TGG 0.654719 tig0016833:+9187 Msa1359920:CDS
GATCATCGTCGGGTTCGTGG+TGG 0.657843 tig0016833:-7978 None:intergenic
TGAAGCGAATCCCAACGAAG+AGG 0.670151 tig0016833:-8495 None:intergenic
ACAAGAAGAAGAAGAACACG+AGG 0.672177 tig0016833:+8686 Msa1359920:CDS
AATTCTCGCGAGAAAAGCGG+TGG 0.679571 tig0016833:-8101 None:intergenic
GGATGATCCTCAAATTTACG+AGG 0.692767 tig0016833:+8524 Msa1359920:CDS
GTATTCCTAATCCCCAACCA+AGG 0.713126 tig0016833:-9116 None:intergenic
AGTGCTCCGAGCCAACATTG+GGG 0.718946 tig0016833:-9198 None:intergenic
ATGATGCTGATTATGAACGT+AGG 0.726355 tig0016833:+9171 Msa1359920:CDS
ACAAACGCTACAGAAGCCGG+TGG 0.728119 tig0016833:-8948 None:intergenic
TCAATAAACGAAGTACCGCG+AGG 0.792094 tig0016833:-8663 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTTTAACAATGTAATTG+AGG + tig0016833:8452-8471 Msa1359920:CDS 20.0%
!!! TGATTTTAACAATGTAATTG+AGG + tig0016833:8452-8471 Msa1359920:CDS 20.0%
!! ACAGTTTAAGTTTCGATTTA+GGG + tig0016833:8217-8236 Msa1359920:CDS 25.0%
!! TGATGATTTTCCTGATATTA+CGG + tig0016833:8293-8312 Msa1359920:CDS 25.0%
!! ACAGTTTAAGTTTCGATTTA+GGG + tig0016833:8217-8236 Msa1359920:CDS 25.0%
!! TGATGATTTTCCTGATATTA+CGG + tig0016833:8293-8312 Msa1359920:CDS 25.0%
TAACGATTGATGAATTGGAT+CGG - tig0016833:8181-8200 None:intergenic 30.0%
TCGTTTAACGATTGATGAAT+TGG - tig0016833:8186-8205 None:intergenic 30.0%
GAAACTTAAACTGTCGAAAA+CGG - tig0016833:8211-8230 None:intergenic 30.0%
! GACAGTTTAAGTTTCGATTT+AGG + tig0016833:8216-8235 Msa1359920:CDS 30.0%
ACGTATTGTTGAGATTGATT+CGG + tig0016833:8344-8363 Msa1359920:CDS 30.0%
!! GAAGTTGATAGAAATGGAAA+CGG + tig0016833:8381-8400 Msa1359920:CDS 30.0%
GTAATTGAGGAAGAAGAAAT+CGG + tig0016833:8465-8484 Msa1359920:CDS 30.0%
TAATTGAGGAAGAAGAAATC+GGG + tig0016833:8466-8485 Msa1359920:CDS 30.0%
TCAAAATCCTCGTAAATTTG+AGG - tig0016833:8534-8553 None:intergenic 30.0%
! AAATTTACGAGGATTTTGAG+TGG + tig0016833:8535-8554 Msa1359920:CDS 30.0%
!! AATTTACGAGGATTTTGAGT+GGG + tig0016833:8536-8555 Msa1359920:CDS 30.0%
! TTTGATGATAGGGAAATTCT+TGG + tig0016833:8579-8598 Msa1359920:CDS 30.0%
ATGACGAAAACAGTAACAAT+AGG + tig0016833:8622-8641 Msa1359920:CDS 30.0%
AGTAACAATAGGTCTGTTAA+TGG + tig0016833:8633-8652 Msa1359920:CDS 30.0%
GAAATCACATGATAAGTTTC+AGG - tig0016833:8828-8847 None:intergenic 30.0%
!! TGTAAAGATGAATTTGCTGT+TGG + tig0016833:9038-9057 Msa1359920:CDS 30.0%
TAACGATTGATGAATTGGAT+CGG - tig0016833:8181-8200 None:intergenic 30.0%
TCGTTTAACGATTGATGAAT+TGG - tig0016833:8186-8205 None:intergenic 30.0%
GAAACTTAAACTGTCGAAAA+CGG - tig0016833:8211-8230 None:intergenic 30.0%
! GACAGTTTAAGTTTCGATTT+AGG + tig0016833:8216-8235 Msa1359920:CDS 30.0%
ACGTATTGTTGAGATTGATT+CGG + tig0016833:8344-8363 Msa1359920:CDS 30.0%
!! GAAGTTGATAGAAATGGAAA+CGG + tig0016833:8381-8400 Msa1359920:CDS 30.0%
GTAATTGAGGAAGAAGAAAT+CGG + tig0016833:8465-8484 Msa1359920:CDS 30.0%
TAATTGAGGAAGAAGAAATC+GGG + tig0016833:8466-8485 Msa1359920:CDS 30.0%
TCAAAATCCTCGTAAATTTG+AGG - tig0016833:8534-8553 None:intergenic 30.0%
! AAATTTACGAGGATTTTGAG+TGG + tig0016833:8535-8554 Msa1359920:CDS 30.0%
!! AATTTACGAGGATTTTGAGT+GGG + tig0016833:8536-8555 Msa1359920:CDS 30.0%
! TTTGATGATAGGGAAATTCT+TGG + tig0016833:8579-8598 Msa1359920:CDS 30.0%
ATGACGAAAACAGTAACAAT+AGG + tig0016833:8622-8641 Msa1359920:CDS 30.0%
AGTAACAATAGGTCTGTTAA+TGG + tig0016833:8633-8652 Msa1359920:CDS 30.0%
GAAATCACATGATAAGTTTC+AGG - tig0016833:8828-8847 None:intergenic 30.0%
!! TGTAAAGATGAATTTGCTGT+TGG + tig0016833:9038-9057 Msa1359920:CDS 30.0%
CCAATAAGGTAAAGGGATTA+GGG - tig0016833:8007-8026 None:intergenic 35.0%
ATTGAGATCGAGATGAATGT+CGG - tig0016833:8253-8272 None:intergenic 35.0%
GATCTAGAAACCGTAATATC+AGG - tig0016833:8306-8325 None:intergenic 35.0%
TCTAGATCTGATCCAATTGA+CGG + tig0016833:8318-8337 Msa1359920:CDS 35.0%
ACAATACGTAAACCGTCAAT+TGG - tig0016833:8333-8352 None:intergenic 35.0%
!! GGTGAAGAAGTTGATAGAAA+TGG + tig0016833:8375-8394 Msa1359920:CDS 35.0%
! ATTCTTGGTTTGATGTTTGC+TGG + tig0016833:8594-8613 Msa1359920:CDS 35.0%
AACAATAGGTCTGTTAATGG+TGG + tig0016833:8636-8655 Msa1359920:CDS 35.0%
AGAAGAGGTTACTATGTTGA+GGG + tig0016833:8719-8738 Msa1359920:CDS 35.0%
AGAAGAGGTTAACATGATGA+GGG + tig0016833:8749-8768 Msa1359920:CDS 35.0%
ATGATAAGTTTCAGGACTTG+CGG - tig0016833:8820-8839 None:intergenic 35.0%
! TGATTTCAGAGCCTGATTTT+GGG + tig0016833:8841-8860 Msa1359920:CDS 35.0%
ATGGTGATTGTATTATGCCT+TGG + tig0016833:9099-9118 Msa1359920:CDS 35.0%
TGATTGTATTATGCCTTGGT+TGG + tig0016833:9103-9122 Msa1359920:CDS 35.0%
GATTGTATTATGCCTTGGTT+GGG + tig0016833:9104-9123 Msa1359920:CDS 35.0%
ATTGTATTATGCCTTGGTTG+GGG + tig0016833:9105-9124 Msa1359920:CDS 35.0%
TCATAATCAGCATCATCAGT+AGG - tig0016833:9167-9186 None:intergenic 35.0%
! ATGATGCTGATTATGAACGT+AGG + tig0016833:9171-9190 Msa1359920:CDS 35.0%
CCAATAAGGTAAAGGGATTA+GGG - tig0016833:8007-8026 None:intergenic 35.0%
ATTGAGATCGAGATGAATGT+CGG - tig0016833:8253-8272 None:intergenic 35.0%
GATCTAGAAACCGTAATATC+AGG - tig0016833:8306-8325 None:intergenic 35.0%
TCTAGATCTGATCCAATTGA+CGG + tig0016833:8318-8337 Msa1359920:CDS 35.0%
ACAATACGTAAACCGTCAAT+TGG - tig0016833:8333-8352 None:intergenic 35.0%
!! GGTGAAGAAGTTGATAGAAA+TGG + tig0016833:8375-8394 Msa1359920:CDS 35.0%
! ATTCTTGGTTTGATGTTTGC+TGG + tig0016833:8594-8613 Msa1359920:CDS 35.0%
AACAATAGGTCTGTTAATGG+TGG + tig0016833:8636-8655 Msa1359920:CDS 35.0%
AGAAGAGGTTACTATGTTGA+GGG + tig0016833:8719-8738 Msa1359920:CDS 35.0%
AGAAGAGGTTAACATGATGA+GGG + tig0016833:8749-8768 Msa1359920:CDS 35.0%
ATGATAAGTTTCAGGACTTG+CGG - tig0016833:8820-8839 None:intergenic 35.0%
! TGATTTCAGAGCCTGATTTT+GGG + tig0016833:8841-8860 Msa1359920:CDS 35.0%
ATGGTGATTGTATTATGCCT+TGG + tig0016833:9099-9118 Msa1359920:CDS 35.0%
TGATTGTATTATGCCTTGGT+TGG + tig0016833:9103-9122 Msa1359920:CDS 35.0%
GATTGTATTATGCCTTGGTT+GGG + tig0016833:9104-9123 Msa1359920:CDS 35.0%
ATTGTATTATGCCTTGGTTG+GGG + tig0016833:9105-9124 Msa1359920:CDS 35.0%
TCATAATCAGCATCATCAGT+AGG - tig0016833:9167-9186 None:intergenic 35.0%
! ATGATGCTGATTATGAACGT+AGG + tig0016833:9171-9190 Msa1359920:CDS 35.0%
ATTAGGGTTTGATCATCGTC+GGG - tig0016833:7991-8010 None:intergenic 40.0%
GATTAGGGTTTGATCATCGT+CGG - tig0016833:7992-8011 None:intergenic 40.0%
CCCTAATCCCTTTACCTTAT+TGG + tig0016833:8004-8023 Msa1359920:CDS 40.0%
GCCAATAAGGTAAAGGGATT+AGG - tig0016833:8008-8027 None:intergenic 40.0%
TGGAAGGCCAATAAGGTAAA+GGG - tig0016833:8014-8033 None:intergenic 40.0%
ATCGAAATCGAAGTCGAGAT+CGG - tig0016833:8040-8059 None:intergenic 40.0%
TTGTGATTGGATGGGAATTC+GGG - tig0016833:8078-8097 None:intergenic 40.0%
GTTGTGATTGGATGGGAATT+CGG - tig0016833:8079-8098 None:intergenic 40.0%
CAAAATTCTCGCGAGAAAAG+CGG - tig0016833:8107-8126 None:intergenic 40.0%
! TTCTCGCGAGAATTTTGTGA+TGG + tig0016833:8110-8129 Msa1359920:CDS 40.0%
!! GAGATTGATTCGGATTCTGA+TGG + tig0016833:8354-8373 Msa1359920:CDS 40.0%
GGATGATCCTCAAATTTACG+AGG + tig0016833:8524-8543 Msa1359920:CDS 40.0%
ACAAGAAGAAGAAGAACACG+AGG + tig0016833:8686-8705 Msa1359920:CDS 40.0%
GAGAAGAGGTTACTATGTTG+AGG + tig0016833:8718-8737 Msa1359920:CDS 40.0%
GTTACTATGTTGAGGGTAGA+TGG + tig0016833:8726-8745 Msa1359920:CDS 40.0%
GAGAAGAGGTTAACATGATG+AGG + tig0016833:8748-8767 Msa1359920:CDS 40.0%
! GTGATTTCAGAGCCTGATTT+TGG + tig0016833:8840-8859 Msa1359920:CDS 40.0%
! GATTTCAGAGCCTGATTTTG+GGG + tig0016833:8842-8861 Msa1359920:CDS 40.0%
TCATCATTGTCCCCAAAATC+AGG - tig0016833:8855-8874 None:intergenic 40.0%
GCAGAGTATGAGATGATGTT+TGG + tig0016833:8888-8907 Msa1359920:CDS 40.0%
GATGATGTTTGGTCAATTCG+CGG + tig0016833:8899-8918 Msa1359920:CDS 40.0%
! GTTTGTTGAGAATCTTCCGT+CGG + tig0016833:8965-8984 Msa1359920:CDS 40.0%
!! TGAATTTGCTGTTGGAGAAG+AGG + tig0016833:9046-9065 Msa1359920:CDS 40.0%
CCATGATATCGATGAGAACA+CGG - tig0016833:9083-9102 None:intergenic 40.0%
ATTAGGGTTTGATCATCGTC+GGG - tig0016833:7991-8010 None:intergenic 40.0%
GATTAGGGTTTGATCATCGT+CGG - tig0016833:7992-8011 None:intergenic 40.0%
CCCTAATCCCTTTACCTTAT+TGG + tig0016833:8004-8023 Msa1359920:CDS 40.0%
GCCAATAAGGTAAAGGGATT+AGG - tig0016833:8008-8027 None:intergenic 40.0%
TGGAAGGCCAATAAGGTAAA+GGG - tig0016833:8014-8033 None:intergenic 40.0%
ATCGAAATCGAAGTCGAGAT+CGG - tig0016833:8040-8059 None:intergenic 40.0%
TTGTGATTGGATGGGAATTC+GGG - tig0016833:8078-8097 None:intergenic 40.0%
GTTGTGATTGGATGGGAATT+CGG - tig0016833:8079-8098 None:intergenic 40.0%
CAAAATTCTCGCGAGAAAAG+CGG - tig0016833:8107-8126 None:intergenic 40.0%
! TTCTCGCGAGAATTTTGTGA+TGG + tig0016833:8110-8129 Msa1359920:CDS 40.0%
!! GAGATTGATTCGGATTCTGA+TGG + tig0016833:8354-8373 Msa1359920:CDS 40.0%
GGATGATCCTCAAATTTACG+AGG + tig0016833:8524-8543 Msa1359920:CDS 40.0%
ACAAGAAGAAGAAGAACACG+AGG + tig0016833:8686-8705 Msa1359920:CDS 40.0%
GAGAAGAGGTTACTATGTTG+AGG + tig0016833:8718-8737 Msa1359920:CDS 40.0%
GTTACTATGTTGAGGGTAGA+TGG + tig0016833:8726-8745 Msa1359920:CDS 40.0%
GAGAAGAGGTTAACATGATG+AGG + tig0016833:8748-8767 Msa1359920:CDS 40.0%
! GTGATTTCAGAGCCTGATTT+TGG + tig0016833:8840-8859 Msa1359920:CDS 40.0%
! GATTTCAGAGCCTGATTTTG+GGG + tig0016833:8842-8861 Msa1359920:CDS 40.0%
TCATCATTGTCCCCAAAATC+AGG - tig0016833:8855-8874 None:intergenic 40.0%
GCAGAGTATGAGATGATGTT+TGG + tig0016833:8888-8907 Msa1359920:CDS 40.0%
GATGATGTTTGGTCAATTCG+CGG + tig0016833:8899-8918 Msa1359920:CDS 40.0%
! GTTTGTTGAGAATCTTCCGT+CGG + tig0016833:8965-8984 Msa1359920:CDS 40.0%
!! TGAATTTGCTGTTGGAGAAG+AGG + tig0016833:9046-9065 Msa1359920:CDS 40.0%
CCATGATATCGATGAGAACA+CGG - tig0016833:9083-9102 None:intergenic 40.0%
GTGGAAGGCCAATAAGGTAA+AGG - tig0016833:8015-8034 None:intergenic 45.0%
ATTGGATGGGAATTCGGGAT+CGG - tig0016833:8073-8092 None:intergenic 45.0%
GGTGGTTGTTGTGATTGGAT+GGG - tig0016833:8086-8105 None:intergenic 45.0%
AAAGCGGTGGTTGTTGTGAT+TGG - tig0016833:8091-8110 None:intergenic 45.0%
GAGATTGTTCAACGCGTTGT+TGG - tig0016833:8143-8162 None:intergenic 45.0%
AGATCGAGATGAATGTCGGA+AGG - tig0016833:8249-8268 None:intergenic 45.0%
! AACGGAGACAACGTGTTTTG+TGG + tig0016833:8399-8418 Msa1359920:CDS 45.0%
!! TTACGAGGATTTTGAGTGGG+AGG + tig0016833:8539-8558 Msa1359920:CDS 45.0%
TTTGAGTGGGAGGAAGTTGA+TGG + tig0016833:8549-8568 Msa1359920:CDS 45.0%
!! ATGGTGGTGGCTTTGATGAT+AGG + tig0016833:8568-8587 Msa1359920:CDS 45.0%
!! TGGTGGTGGCTTTGATGATA+GGG + tig0016833:8569-8588 Msa1359920:CDS 45.0%
!! TCAATAAACGAAGTACCGCG+AGG - tig0016833:8666-8685 None:intergenic 45.0%
GAAGAACACGAGGAAGAAGA+TGG + tig0016833:8696-8715 Msa1359920:CDS 45.0%
GAGGTTAACATGATGAGGGT+TGG + tig0016833:8753-8772 Msa1359920:CDS 45.0%
GTTAACATGATGAGGGTTGG+TGG + tig0016833:8756-8775 Msa1359920:CDS 45.0%
GAGGGACGGAAAATCTTGAT+TGG + tig0016833:8778-8797 Msa1359920:CDS 45.0%
TTCGTTTACCAGTAAGCCAC+CGG + tig0016833:8932-8951 Msa1359920:CDS 45.0%
TCAACAAACGCTACAGAAGC+CGG - tig0016833:8954-8973 None:intergenic 45.0%
TCTTTAGTCACAACCACCGA+CGG - tig0016833:8984-9003 None:intergenic 45.0%
CCGTGTTCTCATCGATATCA+TGG + tig0016833:9080-9099 Msa1359920:CDS 45.0%
TTATGCCTTGGTTGGGGATT+AGG + tig0016833:9111-9130 Msa1359920:CDS 45.0%
GTATTCCTAATCCCCAACCA+AGG - tig0016833:9119-9138 None:intergenic 45.0%
GTGGAAGGCCAATAAGGTAA+AGG - tig0016833:8015-8034 None:intergenic 45.0%
ATTGGATGGGAATTCGGGAT+CGG - tig0016833:8073-8092 None:intergenic 45.0%
GGTGGTTGTTGTGATTGGAT+GGG - tig0016833:8086-8105 None:intergenic 45.0%
AAAGCGGTGGTTGTTGTGAT+TGG - tig0016833:8091-8110 None:intergenic 45.0%
GAGATTGTTCAACGCGTTGT+TGG - tig0016833:8143-8162 None:intergenic 45.0%
AGATCGAGATGAATGTCGGA+AGG - tig0016833:8249-8268 None:intergenic 45.0%
! AACGGAGACAACGTGTTTTG+TGG + tig0016833:8399-8418 Msa1359920:CDS 45.0%
!! TTACGAGGATTTTGAGTGGG+AGG + tig0016833:8539-8558 Msa1359920:CDS 45.0%
TTTGAGTGGGAGGAAGTTGA+TGG + tig0016833:8549-8568 Msa1359920:CDS 45.0%
!! ATGGTGGTGGCTTTGATGAT+AGG + tig0016833:8568-8587 Msa1359920:CDS 45.0%
!! TGGTGGTGGCTTTGATGATA+GGG + tig0016833:8569-8588 Msa1359920:CDS 45.0%
!! TCAATAAACGAAGTACCGCG+AGG - tig0016833:8666-8685 None:intergenic 45.0%
GAAGAACACGAGGAAGAAGA+TGG + tig0016833:8696-8715 Msa1359920:CDS 45.0%
GAGGTTAACATGATGAGGGT+TGG + tig0016833:8753-8772 Msa1359920:CDS 45.0%
GTTAACATGATGAGGGTTGG+TGG + tig0016833:8756-8775 Msa1359920:CDS 45.0%
GAGGGACGGAAAATCTTGAT+TGG + tig0016833:8778-8797 Msa1359920:CDS 45.0%
TTCGTTTACCAGTAAGCCAC+CGG + tig0016833:8932-8951 Msa1359920:CDS 45.0%
TCAACAAACGCTACAGAAGC+CGG - tig0016833:8954-8973 None:intergenic 45.0%
TCTTTAGTCACAACCACCGA+CGG - tig0016833:8984-9003 None:intergenic 45.0%
CCGTGTTCTCATCGATATCA+TGG + tig0016833:9080-9099 Msa1359920:CDS 45.0%
TTATGCCTTGGTTGGGGATT+AGG + tig0016833:9111-9130 Msa1359920:CDS 45.0%
GTATTCCTAATCCCCAACCA+AGG - tig0016833:9119-9138 None:intergenic 45.0%
TTTGATCATCGTCGGGTTCG+TGG - tig0016833:7984-8003 None:intergenic 50.0%
TCGGAAGTGGAAGGCCAATA+AGG - tig0016833:8021-8040 None:intergenic 50.0%
AAGTCGAGATCGGAAGTGGA+AGG - tig0016833:8030-8049 None:intergenic 50.0%
ATCGAAGTCGAGATCGGAAG+TGG - tig0016833:8034-8053 None:intergenic 50.0%
CGGTGGTTGTTGTGATTGGA+TGG - tig0016833:8087-8106 None:intergenic 50.0%
AATTCTCGCGAGAAAAGCGG+TGG - tig0016833:8104-8123 None:intergenic 50.0%
! TCGGGAGTTTTCCTCTTCGT+TGG + tig0016833:8484-8503 Msa1359920:CDS 50.0%
! CGGGAGTTTTCCTCTTCGTT+GGG + tig0016833:8485-8504 Msa1359920:CDS 50.0%
TGAAGCGAATCCCAACGAAG+AGG - tig0016833:8498-8517 None:intergenic 50.0%
TCGTTGGGATTCGCTTCAGT+TGG + tig0016833:8500-8519 Msa1359920:CDS 50.0%
TTGGGATTCGCTTCAGTTGG+AGG + tig0016833:8503-8522 Msa1359920:CDS 50.0%
CGAGGAAGAAGATGGAGAAG+AGG + tig0016833:8704-8723 Msa1359920:CDS 50.0%
GTTGAGGGTAGATGGAGAAG+AGG + tig0016833:8734-8753 Msa1359920:CDS 50.0%
!! AACATGATGAGGGTTGGTGG+AGG + tig0016833:8759-8778 Msa1359920:CDS 50.0%
!! ACATGATGAGGGTTGGTGGA+GGG + tig0016833:8760-8779 Msa1359920:CDS 50.0%
TGTTGAGAATCTTCCGTCGG+TGG + tig0016833:8968-8987 Msa1359920:CDS 50.0%
GTCGGTGGTTGTGACTAAAG+AGG + tig0016833:8983-9002 Msa1359920:CDS 50.0%
GGTTGTGACTAAAGAGGACG+TGG + tig0016833:8989-9008 Msa1359920:CDS 50.0%
GGAAACTCACAGCGACAAAC+AGG - tig0016833:9146-9165 None:intergenic 50.0%
ACGTAGGAAAGCCCCAATGT+TGG + tig0016833:9187-9206 Msa1359920:CDS 50.0%
AAGTGCTCCGAGCCAACATT+GGG - tig0016833:9202-9221 None:intergenic 50.0%
TTTGATCATCGTCGGGTTCG+TGG - tig0016833:7984-8003 None:intergenic 50.0%
TCGGAAGTGGAAGGCCAATA+AGG - tig0016833:8021-8040 None:intergenic 50.0%
AAGTCGAGATCGGAAGTGGA+AGG - tig0016833:8030-8049 None:intergenic 50.0%
ATCGAAGTCGAGATCGGAAG+TGG - tig0016833:8034-8053 None:intergenic 50.0%
CGGTGGTTGTTGTGATTGGA+TGG - tig0016833:8087-8106 None:intergenic 50.0%
AATTCTCGCGAGAAAAGCGG+TGG - tig0016833:8104-8123 None:intergenic 50.0%
! TCGGGAGTTTTCCTCTTCGT+TGG + tig0016833:8484-8503 Msa1359920:CDS 50.0%
! CGGGAGTTTTCCTCTTCGTT+GGG + tig0016833:8485-8504 Msa1359920:CDS 50.0%
TGAAGCGAATCCCAACGAAG+AGG - tig0016833:8498-8517 None:intergenic 50.0%
TCGTTGGGATTCGCTTCAGT+TGG + tig0016833:8500-8519 Msa1359920:CDS 50.0%
TTGGGATTCGCTTCAGTTGG+AGG + tig0016833:8503-8522 Msa1359920:CDS 50.0%
CGAGGAAGAAGATGGAGAAG+AGG + tig0016833:8704-8723 Msa1359920:CDS 50.0%
GTTGAGGGTAGATGGAGAAG+AGG + tig0016833:8734-8753 Msa1359920:CDS 50.0%
!! AACATGATGAGGGTTGGTGG+AGG + tig0016833:8759-8778 Msa1359920:CDS 50.0%
!! ACATGATGAGGGTTGGTGGA+GGG + tig0016833:8760-8779 Msa1359920:CDS 50.0%
TGTTGAGAATCTTCCGTCGG+TGG + tig0016833:8968-8987 Msa1359920:CDS 50.0%
GTCGGTGGTTGTGACTAAAG+AGG + tig0016833:8983-9002 Msa1359920:CDS 50.0%
GGTTGTGACTAAAGAGGACG+TGG + tig0016833:8989-9008 Msa1359920:CDS 50.0%
GGAAACTCACAGCGACAAAC+AGG - tig0016833:9146-9165 None:intergenic 50.0%
ACGTAGGAAAGCCCCAATGT+TGG + tig0016833:9187-9206 Msa1359920:CDS 50.0%
AAGTGCTCCGAGCCAACATT+GGG - tig0016833:9202-9221 None:intergenic 50.0%
!! GAGTGGGAGGAAGTTGATGG+TGG + tig0016833:8552-8571 Msa1359920:CDS 55.0%
!! TGGGAGGAAGTTGATGGTGG+TGG + tig0016833:8555-8574 Msa1359920:CDS 55.0%
GTTAATGGTGGTCGTCCTCG+CGG + tig0016833:8648-8667 Msa1359920:CDS 55.0%
TACAGAAGCCGGTGGCTTAC+TGG - tig0016833:8943-8962 None:intergenic 55.0%
ACAAACGCTACAGAAGCCGG+TGG - tig0016833:8951-8970 None:intergenic 55.0%
! GGAAAGCCCCAATGTTGGCT+CGG + tig0016833:9192-9211 Msa1359920:CDS 55.0%
AGTGCTCCGAGCCAACATTG+GGG - tig0016833:9201-9220 None:intergenic 55.0%
CAAGTGCTCCGAGCCAACAT+TGG - tig0016833:9203-9222 None:intergenic 55.0%
!! GAGTGGGAGGAAGTTGATGG+TGG + tig0016833:8552-8571 Msa1359920:CDS 55.0%
!! TGGGAGGAAGTTGATGGTGG+TGG + tig0016833:8555-8574 Msa1359920:CDS 55.0%
GTTAATGGTGGTCGTCCTCG+CGG + tig0016833:8648-8667 Msa1359920:CDS 55.0%
TACAGAAGCCGGTGGCTTAC+TGG - tig0016833:8943-8962 None:intergenic 55.0%
ACAAACGCTACAGAAGCCGG+TGG - tig0016833:8951-8970 None:intergenic 55.0%
! GGAAAGCCCCAATGTTGGCT+CGG + tig0016833:9192-9211 Msa1359920:CDS 55.0%
AGTGCTCCGAGCCAACATTG+GGG - tig0016833:9201-9220 None:intergenic 55.0%
CAAGTGCTCCGAGCCAACAT+TGG - tig0016833:9203-9222 None:intergenic 55.0%
! GTGGTGGTGACGACGGAGAT+AGG - tig0016833:7962-7981 None:intergenic 60.0%
!! GTTCGTGGTGGTGGTGACGA+CGG - tig0016833:7969-7988 None:intergenic 60.0%
GATCATCGTCGGGTTCGTGG+TGG - tig0016833:7981-8000 None:intergenic 60.0%
!! GATGAGGGTTGGTGGAGGGA+CGG + tig0016833:8764-8783 Msa1359920:CDS 60.0%
! GTGGTGGTGACGACGGAGAT+AGG - tig0016833:7962-7981 None:intergenic 60.0%
!! GTTCGTGGTGGTGGTGACGA+CGG - tig0016833:7969-7988 None:intergenic 60.0%
GATCATCGTCGGGTTCGTGG+TGG - tig0016833:7981-8000 None:intergenic 60.0%
!! GATGAGGGTTGGTGGAGGGA+CGG + tig0016833:8764-8783 Msa1359920:CDS 60.0%
CATCGTCGGGTTCGTGGTGG+TGG - tig0016833:7978-7997 None:intergenic 65.0%
CATCGTCGGGTTCGTGGTGG+TGG - tig0016833:7978-7997 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0016833 gene 7946 9223 7946 ID=Msa1359920;Name=Msa1359920
tig0016833 mRNA 7946 9223 7946 ID=Msa1359920-mRNA-1;Parent=Msa1359920;Name=Msa1359920-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|425
tig0016833 exon 7946 9223 7946 ID=Msa1359920-mRNA-1:exon:11605;Parent=Msa1359920-mRNA-1
tig0016833 CDS 7946 9223 7946 ID=Msa1359920-mRNA-1:cds;Parent=Msa1359920-mRNA-1
Gene Sequence

>Msa1359920

ATGGCTGATGTAACCTATCTCCGTCGTCACCACCACCACGAACCCGACGATGATCAAACCCTAATCCCTTTACCTTATTGGCCTTCCACTTCCGATCTCGACTTCGATTTCGATCTCTACTCTTCCGATCCCGAATTCCCATCCAATCACAACAACCACCGCTTTTCTCGCGAGAATTTTGTGATGGATCTTTTCCAACAACGCGTTGAACAATCTCAAATTACTAATCACACCGATCCAATTCATCAATCGTTAAACGACTCCGTTTTCGACAGTTTAAGTTTCGATTTAGGGTTCAATCCTTCCGACATTCATCTCGATCTCAATGTCGCTGCTGAAGAAGATGATGATGATTTTCCTGATATTACGGTTTCTAGATCTGATCCAATTGACGGTTTACGTATTGTTGAGATTGATTCGGATTCTGATGGTGAAGAAGTTGATAGAAATGGAAACGGAGACAACGTGTTTTGTGGAATCTGTATGCATTCTGATGCTGATGAAGATGATTTTAACAATGTAATTGAGGAAGAAGAAATCGGGAGTTTTCCTCTTCGTTGGGATTCGCTTCAGTTGGAGGATGATCCTCAAATTTACGAGGATTTTGAGTGGGAGGAAGTTGATGGTGGTGGCTTTGATGATAGGGAAATTCTTGGTTTGATGTTTGCTGGTGATGATGACGAAAACAGTAACAATAGGTCTGTTAATGGTGGTCGTCCTCGCGGTACTTCGTTTATTGAACAAGAAGAAGAAGAACACGAGGAAGAAGATGGAGAAGAGGTTACTATGTTGAGGGTAGATGGAGAAGAGGTTAACATGATGAGGGTTGGTGGAGGGACGGAAAATCTTGATTGGCAAGTTTTGTTGAATTCCGCAAGTCCTGAAACTTATCATGTGATTTCAGAGCCTGATTTTGGGGACAATGATGATTACATTTACACTGCAGAGTATGAGATGATGTTTGGTCAATTCGCGGATAATGTGAATTCGTTTACCAGTAAGCCACCGGCTTCTGTAGCGTTTGTTGAGAATCTTCCGTCGGTGGTTGTGACTAAAGAGGACGTGGATAACAACAATGCGTTGTGTGCAGTTTGTAAAGATGAATTTGCTGTTGGAGAAGAGGTGAAGTTGTTGCCGTGTTCTCATCGATATCATGGTGATTGTATTATGCCTTGGTTGGGGATTAGGAATACTTGTCCTGTTTGTCGCTGTGAGTTTCCTACTGATGATGCTGATTATGAACGTAGGAAAGCCCCAATGTTGGCTCGGAGCACTTGA

Protein sequence

>Msa1359920

MADVTYLRRHHHHEPDDDQTLIPLPYWPSTSDLDFDFDLYSSDPEFPSNHNNHRFSRENFVMDLFQQRVEQSQITNHTDPIHQSLNDSVFDSLSFDLGFNPSDIHLDLNVAAEEDDDDFPDITVSRSDPIDGLRIVEIDSDSDGEEVDRNGNGDNVFCGICMHSDADEDDFNNVIEEEEIGSFPLRWDSLQLEDDPQIYEDFEWEEVDGGGFDDREILGLMFAGDDDENSNNRSVNGGRPRGTSFIEQEEEEHEEEDGEEVTMLRVDGEEVNMMRVGGGTENLDWQVLLNSASPETYHVISEPDFGDNDDYIYTAEYEMMFGQFADNVNSFTSKPPASVAFVENLPSVVVTKEDVDNNNALCAVCKDEFAVGEEVKLLPCSHRYHGDCIMPWLGIRNTCPVCRCEFPTDDADYERRKAPMLARST*