AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1237040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1237040 MtrunA17_Chr8g0347711 98.148 378 7 0 148 525 1 378 0.0 754
Msa1237040 MtrunA17_Chr8g0347691 92.675 314 8 1 525 838 2 300 0.0 595
Msa1237040 MtrunA17_Chr3g0145691 85.246 305 30 1 525 829 2 291 0.0 533
Msa1237040 MtrunA17_Chr8g0347721 90.826 109 10 0 39 147 8 116 7.38e-64 209
Msa1237040 MtrunA17_Chr4g0006821 51.923 156 34 1 664 819 10 124 8.64e-41 146
Msa1237040 MtrunA17_Chr1g0212071 27.247 356 211 6 162 508 20 336 1.63e-27 116
Msa1237040 MtrunA17_Chr2g0286991 28.804 368 229 10 162 509 11 365 5.81e-26 114
Msa1237040 MtrunA17_Chr2g0286991 26.902 368 192 9 192 508 152 493 4.07e-23 104
Msa1237040 MtrunA17_Chr2g0286991 28.839 267 171 9 215 473 333 588 3.40e-18 89.4
Msa1237040 MtrunA17_Chr2g0286991 26.948 308 213 6 237 538 296 597 1.21e-16 84.3
Msa1237040 MtrunA17_Chr2g0286991 26.515 264 186 5 235 492 320 581 8.00e-16 81.6
Msa1237040 MtrunA17_Chr1g0149351 28.767 365 229 6 157 504 63 413 4.40e-25 111
Msa1237040 MtrunA17_Chr1g0149351 28.378 296 189 7 222 514 360 635 7.55e-17 85.1
Msa1237040 MtrunA17_Chr1g0149351 22.849 372 217 9 206 514 193 557 2.53e-13 73.9
Msa1237040 MtrunA17_Chr3g0124671 53.271 107 37 3 39 132 38 144 4.00e-23 97.4
Msa1237040 MtrunA17_Chr3g0137771 27.632 380 233 10 157 516 66 423 6.21e-20 95.1
Msa1237040 MtrunA17_Chr3g0137771 22.438 361 210 9 206 503 191 544 1.24e-12 71.6
Msa1237040 MtrunA17_Chr3g0137771 26.990 289 172 8 263 514 347 633 2.77e-12 70.5
Msa1237040 MtrunA17_Chr7g0272131 25.057 435 233 14 154 525 41 445 6.77e-20 95.1
Msa1237040 MtrunA17_Chr7g0272131 30.412 194 105 4 211 375 415 607 3.14e-18 89.7
Msa1237040 MtrunA17_Chr7g0272131 27.915 283 191 9 235 510 363 639 7.00e-17 85.5
Msa1237040 MtrunA17_Chr4g0063841 26.966 356 239 8 158 504 60 403 7.18e-18 88.2
Msa1237040 MtrunA17_Chr4g0004901 26.557 305 169 10 233 508 274 552 1.39e-17 87.8
Msa1237040 MtrunA17_Chr4g0004901 25.830 271 192 7 237 501 382 649 1.90e-15 80.9
Msa1237040 MtrunA17_Chr4g0004901 28.926 242 144 9 232 471 455 670 4.20e-15 79.7
Msa1237040 MtrunA17_Chr4g0004901 24.722 360 191 8 233 513 173 531 9.28e-14 75.5
Msa1237040 MtrunA17_Chr4g0004901 25.946 370 195 11 181 518 86 408 6.04e-13 72.8
Msa1237040 MtrunA17_Chr1g0176031 28.616 318 184 12 199 504 17 303 5.50e-16 80.5
Msa1237040 MtrunA17_Chr1g0176031 27.755 245 153 4 234 477 108 329 1.07e-15 79.7
Msa1237040 MtrunA17_Chr1g0152951 23.666 431 263 14 159 534 61 480 2.14e-13 73.9
Msa1237040 MtrunA17_Chr3g0125671 37.624 101 62 1 237 336 182 282 3.21e-12 69.3
Msa1237040 MtrunA17_Chr8g0384901 48.864 88 32 5 41 116 30 116 8.29e-12 63.9
Msa1237040 MtrunA17_Chr1g0159531 36.000 125 72 3 213 336 153 270 9.89e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1237040 AT3G25520.3 79.934 304 46 1 525 828 2 290 7.54e-175 506
Msa1237040 AT3G25520.1 79.934 304 46 1 525 828 2 290 7.54e-175 506
Msa1237040 AT5G39740.2 79.276 304 48 1 525 828 2 290 8.40e-175 506
Msa1237040 AT5G39740.1 79.276 304 48 1 525 828 2 290 8.40e-175 506
Msa1237040 AT3G07550.1 58.015 393 159 3 148 535 1 392 2.33e-143 429
Msa1237040 AT3G07550.2 58.015 393 159 3 148 535 1 392 2.33e-143 429
Msa1237040 AT3G07550.3 53.690 393 149 4 148 535 1 365 3.48e-124 378
Msa1237040 AT3G25520.2 81.461 178 33 0 651 828 2 179 8.48e-104 318
Msa1237040 AT5G23340.1 28.649 370 237 7 162 506 10 377 9.09e-32 129
Msa1237040 AT4G15475.1 28.297 417 218 12 162 508 11 416 2.96e-28 121
Msa1237040 AT4G15475.1 28.364 275 187 5 237 504 296 567 6.87e-21 98.2
Msa1237040 AT4G15475.1 27.698 278 170 6 235 508 218 468 2.20e-16 84.0
Msa1237040 AT4G15475.1 31.387 137 93 1 232 368 447 582 5.64e-13 73.2
Msa1237040 AT4G08330.1 43.697 119 57 3 39 147 38 156 8.89e-22 93.6
Msa1237040 AT2G25490.1 27.624 362 226 8 157 504 62 401 1.14e-20 97.8
Msa1237040 AT2G25490.1 26.996 263 160 9 248 504 374 610 2.75e-11 67.8
Msa1237040 AT5G25350.1 26.158 367 238 7 157 511 53 398 4.40e-20 95.9
Msa1237040 AT5G27920.1 29.123 285 166 8 257 509 142 422 2.47e-17 87.0
Msa1237040 AT5G27920.1 25.654 382 197 8 194 513 172 528 6.24e-17 85.9
Msa1237040 AT5G27920.1 27.473 273 184 9 245 509 335 601 1.04e-15 82.0
Msa1237040 AT5G27920.1 29.362 235 130 9 237 465 405 609 4.43e-12 70.1
Msa1237040 AT3G58530.1 25.926 243 156 5 262 503 112 331 4.04e-17 84.3
Msa1237040 AT3G58530.1 29.586 169 112 4 227 395 155 316 2.80e-12 69.7
Msa1237040 AT4G08330.2 41.509 106 52 3 51 146 39 144 1.03e-16 78.6
Msa1237040 AT1G21410.2 25.418 299 179 9 230 516 85 351 1.37e-15 79.7
Msa1237040 AT1G21410.2 27.128 188 132 3 217 402 125 309 1.52e-11 67.4
Msa1237040 AT1G21410.1 25.418 299 179 9 230 516 85 351 1.37e-15 79.7
Msa1237040 AT1G21410.1 27.128 188 132 3 217 402 125 309 1.52e-11 67.4
Msa1237040 AT5G01720.1 24.490 343 199 7 241 525 232 572 6.78e-15 79.3
Msa1237040 AT5G01720.1 24.756 307 190 10 216 485 253 555 2.31e-14 77.8
Msa1237040 AT5G01720.1 24.364 275 160 5 262 511 151 402 3.55e-12 70.5
Msa1237040 AT1G77000.2 35.897 117 71 2 221 336 158 271 4.80e-13 72.0
Msa1237040 AT1G77000.2 24.407 295 150 9 247 515 103 350 8.93e-13 71.2
Msa1237040 AT1G77000.2 31.250 128 87 1 227 353 135 262 5.74e-12 68.6
Msa1237040 AT1G77000.1 35.897 117 71 2 221 336 158 271 4.80e-13 72.0
Msa1237040 AT1G77000.1 24.407 295 150 9 247 515 103 350 8.93e-13 71.2
Msa1237040 AT1G77000.1 31.250 128 87 1 227 353 135 262 5.74e-12 68.6
Msa1237040 AT1G77000.3 35.714 112 71 1 247 357 103 214 2.19e-12 68.6
Msa1237040 AT1G77000.4 35.714 112 71 1 247 357 103 214 2.19e-12 68.6

Find 213 sgRNAs with CRISPR-Local

Find 526 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCACTGGTTCAACTTTC+TGG -0.059970 8_2:-16293811 Msa1237040:three_prime_UTR
GTTTATTGAGGTTAAAATTT+TGG 0.119515 8_2:-16293850 Msa1237040:three_prime_UTR
TCCCAAACATTGCAAGATTT+TGG 0.175256 8_2:+16302198 None:intergenic
GAGTCCGACGGTTGAAATTT+TGG 0.184394 8_2:+16301286 None:intergenic
AACCAAAATCTTGCAATGTT+TGG 0.225564 8_2:-16302200 Msa1237040:CDS
AAATACCTCTTGTGTTGTTT+TGG 0.227809 8_2:+16294174 None:intergenic
CAATTCCGACCACCCCTTCT+AGG 0.256053 8_2:+16300740 None:intergenic
CATGCAGTCTCTTCAAATTC+TGG 0.257571 8_2:+16300476 None:intergenic
TGCATCAATCTTACTGATAA+TGG 0.289722 8_2:-16300445 Msa1237040:CDS
ATCCTTTATTAACAGACTTT+TGG 0.290547 8_2:+16301704 None:intergenic
GTTCACCGCAAGTATATCTT+TGG 0.291930 8_2:-16294475 Msa1237040:CDS
CGTAAATGTGGGGTTCATAT+TGG 0.309753 8_2:-16301577 Msa1237040:CDS
CAATATGAACCCCACATTTA+CGG 0.316272 8_2:+16301578 None:intergenic
CCCTTCTTCTTTGTCTGCTA+AGG 0.318498 8_2:-16301232 Msa1237040:CDS
ATCTACACATTCGGAAGTTT+AGG 0.320698 8_2:+16300617 None:intergenic
TGTTCTTATCCTGGTTAATC+AGG 0.320790 8_2:+16296103 None:intergenic
ACCAAAATCTTGCAATGTTT+GGG 0.321495 8_2:-16302199 Msa1237040:CDS
GGGCTATCCCTAGTTGCTTC+TGG 0.330852 8_2:-16301033 Msa1237040:CDS
TGTGGGGTTCATATTGGTTA+TGG 0.334859 8_2:-16301571 Msa1237040:CDS
TTCTCTGATTTCTTAATTGT+AGG 0.339582 8_2:+16294204 None:intergenic
TTTCACTGGTTCAACTTTCT+GGG 0.341276 8_2:-16293810 Msa1237040:three_prime_UTR
TGTCATGAGGTGAGTATATC+TGG 0.346053 8_2:-16300523 Msa1237040:CDS
CACAGTGACAAAAGGTTTGC+TGG 0.351205 8_2:-16294532 Msa1237040:CDS
TTTACACCGTCCATATTCAT+AGG 0.354668 8_2:-16301200 Msa1237040:CDS
TTGTGCCACTATGTCCTTGT+TGG 0.354967 8_2:+16295143 None:intergenic
TGCACGGAGCTCGATGATTC+AGG 0.355920 8_2:-16301132 Msa1237040:CDS
TACCAAAAGTCTGTTAATAA+AGG 0.356007 8_2:-16301706 Msa1237040:CDS
CGTACTGATCGTGAATCATT+TGG 0.356173 8_2:-16301336 Msa1237040:CDS
GCCTTAGCAACCTATGAATA+TGG 0.358247 8_2:+16301190 None:intergenic
TGTTGTACTTGTTCTTATCC+TGG 0.370099 8_2:+16296094 None:intergenic
CCGTGTCTTTGGTGCCTTGA+AGG 0.376067 8_2:-16294672 Msa1237040:intron
GATGGAGGTAGCACCAAGTT+TGG 0.377119 8_2:+16301410 None:intergenic
CTCTACATGCACGAGAGATT+TGG 0.377470 8_2:+16300783 None:intergenic
ACTACTGGAAACCGTGTCTT+TGG 0.377680 8_2:-16294683 Msa1237040:CDS
CTTGGCTTTCCGCTCCTCAT+AGG 0.377823 8_2:+16294037 None:intergenic
TCTTGTAAACTTAGCCTAGA+AGG 0.380073 8_2:-16300754 Msa1237040:CDS
TTCACCGCAAGTATATCTTT+GGG 0.381172 8_2:-16294474 Msa1237040:CDS
GGAGATCCCCTGCGTGGAAT+AGG 0.381410 8_2:-16300661 Msa1237040:CDS
ACAACCATTCAAGTACAAAA+TGG 0.391558 8_2:+16300387 None:intergenic
GAGAGCACGGAATGGCCTCC+TGG 0.398347 8_2:+16294730 None:intergenic
TTTGATAATACCTTTCTTGT+TGG 0.398541 8_2:-16293704 Msa1237040:three_prime_UTR
TTTGAATTAGGTTTATGTTA+AGG 0.401148 8_2:-16296317 Msa1237040:intron
ATAGTGTCCGCTAGTATTGC+TGG 0.407211 8_2:-16295120 Msa1237040:CDS
GAATATCCAAACCACCATCT+AGG 0.409965 8_2:+16294557 None:intergenic
TCGGACAACAAATCGGTACT+TGG 0.416359 8_2:+16296068 None:intergenic
TGTAACAATATGAAGAGTTC+CGG 0.419865 8_2:-16293616 Msa1237040:three_prime_UTR
TGTCAGAGAGCCAGGTGAAA+TGG 0.423854 8_2:+16301507 None:intergenic
TGTCTTAACATTACTGATGA+AGG 0.429447 8_2:-16300976 Msa1237040:CDS
TTCTTCTCTTGAACTTGACT+TGG 0.430059 8_2:+16296263 None:intergenic
CACTGCAGCTGCGGCTCTTG+TGG 0.435041 8_2:-16301784 Msa1237040:intron
GCATCACACTGATGCATAAC+CGG 0.435183 8_2:+16293597 None:intergenic
TATTAAGTTTCAGAAGGATA+AGG 0.436332 8_2:-16302149 Msa1237040:CDS
TGTATTCACTAAAGTGAGTC+TGG 0.437754 8_2:+16294298 None:intergenic
GTCGGAATTGTTAGCGGTGG+CGG 0.438075 8_2:-16300727 Msa1237040:CDS
CAGGGGCGATGTTTGCATAA+AGG 0.439933 8_2:-16300323 Msa1237040:CDS
TGAGATGGATGAGGAGTATG+AGG 0.439950 8_2:-16294882 Msa1237040:CDS
TTATTGCACTGGACTCCTCT+TGG 0.442461 8_2:-16294927 Msa1237040:CDS
GTTTCAGAAGGATAAGGATA+AGG 0.447742 8_2:-16302143 Msa1237040:CDS
AGAGAATCACCTGCACTTTG+TGG 0.448583 8_2:-16301541 Msa1237040:CDS
CCTTCTTCTTTGTCTGCTAA+GGG 0.452418 8_2:-16301231 Msa1237040:CDS
GGTTTACAGGGAGCCCTAGA+TGG 0.454096 8_2:-16294571 Msa1237040:intron
AAGAGCTTTCAACCCTTTGT+CGG 0.454218 8_2:+16300885 None:intergenic
TGCTTAAGTTGGTCACCATC+GGG 0.456966 8_2:-16300682 Msa1237040:CDS
ATGGAAGATCTTTCCAAACT+TGG 0.457693 8_2:-16301423 Msa1237040:CDS
CTTCATCAACCTGTGTAAAA+CGG 0.457853 8_2:+16301653 None:intergenic
GTAACGCTTGAAGTAAGCCT+TGG 0.458552 8_2:+16296285 None:intergenic
TCTTCAGATGAGTCTTGAAA+AGG 0.458770 8_2:-16301451 Msa1237040:intron
TAGATGTATCTTGCTTAAGT+TGG 0.458772 8_2:-16300693 Msa1237040:CDS
GGTCTTGTTAAGACCACTAC+TGG 0.466788 8_2:-16294698 Msa1237040:CDS
GGGAGCCCTAGATGGTGGTT+TGG 0.466900 8_2:-16294563 Msa1237040:CDS
AATGGCCTCCTGGACTCAGC+TGG 0.470728 8_2:+16294740 None:intergenic
TTCAAGTAGTGTACATCCCT+TGG 0.473496 8_2:+16300564 None:intergenic
GCTGAGATCAACGGAAGAAA+AGG 0.474665 8_2:+16301675 None:intergenic
TTCCGTGCTCTCCTTGATGT+TGG 0.475927 8_2:-16294719 Msa1237040:CDS
TTGAATAACTCTAATGCTAA+AGG 0.480544 8_2:+16300352 None:intergenic
GTTGCCTGTACTGTTTATTG+AGG 0.481118 8_2:-16293862 Msa1237040:three_prime_UTR
TGAACCGTAGCTTAGCAAAC+GGG 0.481477 8_2:+16301104 None:intergenic
CATAACTATAAGCTGACAAA+AGG 0.482215 8_2:+16296038 None:intergenic
TTGCTTAAGTTGGTCACCAT+CGG 0.483575 8_2:-16300683 Msa1237040:CDS
AACTGCTTTGCCGTAAATGT+GGG 0.484366 8_2:-16301588 Msa1237040:CDS
AAGTGAGTCTGGAATTTCTC+AGG 0.489225 8_2:+16294309 None:intergenic
ATAAGTGGCGTTGGATTCGA+AGG 0.491105 8_2:-16300811 Msa1237040:CDS
TGAAAATATTAAGTTTCAGA+AGG 0.491450 8_2:-16302155 Msa1237040:CDS
CCACACTTTGGTCTTTCAGT+AGG 0.491595 8_2:-16295060 Msa1237040:CDS
TTGAACCGTAGCTTAGCAAA+CGG 0.494178 8_2:+16301103 None:intergenic
ATTATAAGTTGGGCTTTCAC+TGG 0.494259 8_2:-16293824 Msa1237040:three_prime_UTR
GATGTACACTACTTGAAGAA+TGG 0.498471 8_2:-16300558 Msa1237040:CDS
AATTAAGAAATCAGAGAAGC+AGG 0.500284 8_2:-16294199 Msa1237040:CDS
TACCTGCAGCATAATTTGTA+AGG 0.500398 8_2:+16295037 None:intergenic
GTCAAGTTCAAGAGAAGAAG+AGG 0.501877 8_2:-16296259 Msa1237040:intron
GGCCTTACAAATTATGCTGC+AGG 0.502530 8_2:-16295039 Msa1237040:intron
CCCTTAGCAGACAAAGAAGA+AGG 0.502580 8_2:+16301231 None:intergenic
ATAATAGTAAGGCAGTCATC+TGG 0.504519 8_2:+16301378 None:intergenic
TGTTTGAAAGTCACTAACTA+CGG 0.506597 8_2:-16301054 Msa1237040:CDS
AGTTCTAGATATCCATCACT+TGG 0.507334 8_2:+16293929 None:intergenic
CTTGTAAACTTAGCCTAGAA+GGG 0.509036 8_2:-16300753 Msa1237040:CDS
TCACACTGTGAGCGTATAAG+TGG 0.510402 8_2:-16300826 Msa1237040:CDS
TTAGAGTCTTTATCTCTATG+TGG 0.511065 8_2:-16301156 Msa1237040:CDS
CAGTTGAGCCAGCTGAGTCC+AGG 0.512028 8_2:-16294748 Msa1237040:CDS
CGGACAACAAATCGGTACTT+GGG 0.512041 8_2:+16296069 None:intergenic
TCTGAAGAAGCTTACCTATG+AGG 0.512591 8_2:-16294051 Msa1237040:CDS
TTTAGTGAATACATCAAGAA+AGG 0.515819 8_2:-16294288 Msa1237040:CDS
CAGAAACTGATCTACACATT+CGG 0.516875 8_2:+16300608 None:intergenic
GCTGACAAAAGGATACAAAT+CGG 0.518595 8_2:+16296049 None:intergenic
TGTGAGCCTTCCATTTCACC+TGG 0.520441 8_2:-16301517 Msa1237040:CDS
TAGAGTTATTCAAGTCTCAC+AGG 0.520611 8_2:-16300342 Msa1237040:CDS
ATACAAATCGGACAACAAAT+CGG 0.520677 8_2:+16296061 None:intergenic
ATATTCCTCACAGTGACAAA+AGG 0.523020 8_2:-16294540 Msa1237040:CDS
AAACTGCTTTGCCGTAAATG+TGG 0.524264 8_2:-16301589 Msa1237040:CDS
TCTCATGAGCTACCACACTT+TGG 0.524328 8_2:-16295072 Msa1237040:CDS
GAAGAAAGAGCTCGATGCTG+AGG 0.526853 8_2:-16294497 Msa1237040:CDS
GAACGAGACAACCATGAGAC+TGG 0.527139 8_2:+16301619 None:intergenic
TTCTATTATTGCAATAGCCA+AGG 0.528487 8_2:-16300581 Msa1237040:CDS
ACAGTGACAAAAGGTTTGCT+GGG 0.528756 8_2:-16294531 Msa1237040:CDS
AATATCCAAACCACCATCTA+GGG 0.535350 8_2:+16294558 None:intergenic
TTAACCTCAATAAACAGTAC+AGG 0.537908 8_2:+16293858 None:intergenic
CTCAGGCTCATCTTCAGTCA+AGG 0.537919 8_2:+16294326 None:intergenic
GTTTGAAAGTCACTAACTAC+GGG 0.539400 8_2:-16301053 Msa1237040:CDS
TTTGAAGATGTCAATTTCAG+AGG 0.540293 8_2:+16301757 None:intergenic
GCTCACAAATATCCGACAAA+GGG 0.542576 8_2:-16300897 Msa1237040:CDS
AGGGACAACCAGAAGCAACT+AGG 0.542948 8_2:+16301025 None:intergenic
TGACAAGCGTGAAACCAACT+TGG 0.545707 8_2:+16294019 None:intergenic
TGTAGGATCAGCACGAATTG+CGG 0.548679 8_2:+16294221 None:intergenic
TCACCGCAAGTATATCTTTG+GGG 0.552159 8_2:-16294473 Msa1237040:CDS
ATGTGACCAGCTTATTGCAC+TGG 0.552187 8_2:-16294938 Msa1237040:intron
ATATTTGTGAGCAGTATGAC+AGG 0.553062 8_2:+16300908 None:intergenic
TCCATATTCATAGGTTGCTA+AGG 0.554256 8_2:-16301191 Msa1237040:CDS
ATATCTGGATGGCAAGCAGT+GGG 0.554297 8_2:-16300508 Msa1237040:CDS
ATACGTTAATAGCTTGAAGC+TGG 0.554829 8_2:+16300848 None:intergenic
TGTGAGCGTATAAGTGGCGT+TGG 0.556637 8_2:-16300820 Msa1237040:CDS
AACCGTCTCGTAATGCCCGC+AGG 0.559683 8_2:+16300422 None:intergenic
AAAGACACGGTTTCCAGTAG+TGG 0.561300 8_2:+16294685 None:intergenic
GGCTCACATCCACAAAGTGC+AGG 0.561926 8_2:+16301532 None:intergenic
TAGGCTAAGTTTACAAGACT+CGG 0.561965 8_2:+16300759 None:intergenic
TGACAACAATTAGTCTCTAT+CGG 0.563574 8_2:-16300999 Msa1237040:CDS
TCTTACTGATAATGGCCTGC+GGG 0.566190 8_2:-16300437 Msa1237040:CDS
TCGTATTCGCCTGATTAACC+AGG 0.567348 8_2:-16296112 Msa1237040:CDS
GGGACAACCAGAAGCAACTA+GGG 0.569174 8_2:+16301026 None:intergenic
TGAGGAGCGGAAAGCCAAGT+TGG 0.571454 8_2:-16294033 Msa1237040:CDS
TGTTAAGGCTCAGAAATCCA+AGG 0.572355 8_2:-16296302 Msa1237040:CDS
TTGAAGATGTCAATTTCAGA+GGG 0.573939 8_2:+16301758 None:intergenic
TTACAGGGAGCCCTAGATGG+TGG 0.573973 8_2:-16294568 Msa1237040:intron
ATACATCAAGAAAGGAATTG+AGG 0.575667 8_2:-16294280 Msa1237040:CDS
TCTATTATTGCAATAGCCAA+GGG 0.578035 8_2:-16300580 Msa1237040:CDS
GAGTCTTGAAAAGGTTGACA+TGG 0.579264 8_2:-16301442 Msa1237040:CDS
AGACTAATTGTTGTCAATGA+GGG 0.583295 8_2:+16301006 None:intergenic
AAGTGTCTTCAGAACACGAC+GGG 0.584750 8_2:+16294904 None:intergenic
GAGATGGATGAGGAGTATGA+GGG 0.586795 8_2:-16294881 Msa1237040:CDS
AAGGTTTGCTGGGTTTGACA+AGG 0.586996 8_2:-16294521 Msa1237040:CDS
AGGAAAATCCTATTCCACGC+AGG 0.588987 8_2:+16300653 None:intergenic
TGTGTTTGCAGCCCAAGTGA+TGG 0.590338 8_2:-16293941 Msa1237040:three_prime_UTR
AAGAAAGGAATTGAGGCAGA+TGG 0.591978 8_2:-16294273 Msa1237040:CDS
CCTTGAGGAGCTGTACAAGA+AGG 0.592833 8_2:-16294250 Msa1237040:CDS
GAGACTAATTGTTGTCAATG+AGG 0.594035 8_2:+16301005 None:intergenic
CTAACCCGTTTGCTAAGCTA+CGG 0.594245 8_2:-16301108 Msa1237040:CDS
GGGGTGGTCGGAATTGTTAG+CGG 0.594594 8_2:-16300733 Msa1237040:CDS
CACCGCAAGTATATCTTTGG+GGG 0.596512 8_2:-16294472 Msa1237040:CDS
TGCTCACAAATATCCGACAA+AGG 0.596634 8_2:-16300898 Msa1237040:CDS
CAAATCTCTCGTGCATGTAG+AGG 0.596637 8_2:-16300782 Msa1237040:CDS
GAAGACACTTGAGATGGATG+AGG 0.597148 8_2:-16294891 Msa1237040:CDS
TTTATCTCTATGTGGTTGCA+CGG 0.599367 8_2:-16301148 Msa1237040:CDS
GACCAACATCAAGGAGAGCA+CGG 0.604422 8_2:+16294717 None:intergenic
CCTTAGCAGACAAAGAAGAA+GGG 0.605280 8_2:+16301232 None:intergenic
TAATGCTGCTGTTGATGATG+AGG 0.605286 8_2:-16293991 Msa1237040:CDS
ATCTTACTGATAATGGCCTG+CGG 0.605806 8_2:-16300438 Msa1237040:CDS
GGAAAATCCTATTCCACGCA+GGG 0.607193 8_2:+16300654 None:intergenic
CCTTCAAGGCACCAAAGACA+CGG 0.609408 8_2:+16294672 None:intergenic
ATCTGGTAAGTGCACGATGG+AGG 0.610847 8_2:+16301395 None:intergenic
TGTAAAACGGCTGAGATCAA+CGG 0.611655 8_2:+16301666 None:intergenic
GGACAACAAATCGGTACTTG+GGG 0.611837 8_2:+16296070 None:intergenic
TTGAGCCAGCTGAGTCCAGG+AGG 0.614063 8_2:-16294745 Msa1237040:CDS
CTTAGCCTAGAAGGGGTGGT+CGG 0.618325 8_2:-16300745 Msa1237040:CDS
TCTTAACAAGACCAACATCA+AGG 0.618405 8_2:+16294708 None:intergenic
TATATCTGGATGGCAAGCAG+TGG 0.618448 8_2:-16300509 Msa1237040:CDS
ACATGTTGCTGCATACATGA+AGG 0.618860 8_2:-16294449 Msa1237040:intron
CCACGCAGGGGATCTCCCGA+TGG 0.619884 8_2:+16300667 None:intergenic
TTAGACCAACAAGGACATAG+TGG 0.621773 8_2:-16295148 Msa1237040:intron
ATATCCAAAATTTCAACCGT+CGG 0.624409 8_2:-16301290 Msa1237040:CDS
AGAGAGCCAGGTGAAATGGA+AGG 0.624970 8_2:+16301511 None:intergenic
TGCTGTTGATGATGAGGACG+AGG 0.625300 8_2:-16293985 Msa1237040:CDS
AGAGTTATTCAAGTCTCACA+GGG 0.626131 8_2:-16300341 Msa1237040:CDS
TTTGGATATGGAGCCATCGG+CGG 0.628152 8_2:+16301304 None:intergenic
GTTCTAGATATCCATCACTT+GGG 0.629114 8_2:+16293930 None:intergenic
ACTGCTTTGCCGTAAATGTG+GGG 0.629211 8_2:-16301587 Msa1237040:CDS
TTTCAAAGATAAGCAAGCAG+TGG 0.631769 8_2:+16300939 None:intergenic
TGTTTGCATAAAGGAAGAAG+AGG 0.634712 8_2:-16300314 Msa1237040:intron
GGAGTATGAGGGAAATGTTG+AGG 0.639543 8_2:-16294870 Msa1237040:intron
TGTTCTGAAGACACTTGAGA+TGG 0.640254 8_2:-16294897 Msa1237040:CDS
GTGGTCGGAATTGTTAGCGG+TGG 0.643552 8_2:-16300730 Msa1237040:CDS
TAGCAACCTATGAATATGGA+CGG 0.643940 8_2:+16301194 None:intergenic
TAAACTTAGCCTAGAAGGGG+TGG 0.646086 8_2:-16300749 Msa1237040:CDS
CCTTCTTGTACAGCTCCTCA+AGG 0.646258 8_2:+16294250 None:intergenic
AGGCTCCAAAACAACACAAG+AGG 0.648143 8_2:-16294179 Msa1237040:intron
TTGTAAACTTAGCCTAGAAG+GGG 0.648246 8_2:-16300752 Msa1237040:CDS
TCAGAACACGACGGGCCAAG+AGG 0.649699 8_2:+16294912 None:intergenic
ACATCAAGGAGAGCACGGAA+TGG 0.653230 8_2:+16294722 None:intergenic
AATTGAGGCAGATGGCCTTG+AGG 0.657052 8_2:-16294265 Msa1237040:CDS
GTCATCTGGTAAGTGCACGA+TGG 0.660900 8_2:+16301392 None:intergenic
GAACTTAGCATTATGTCATG+AGG 0.663036 8_2:-16300536 Msa1237040:CDS
ACTCAAATTGCAGAGTCCGA+CGG 0.672603 8_2:+16301274 None:intergenic
TAATCAGGCGAATACGAGCA+CGG 0.680796 8_2:+16296118 None:intergenic
AACTCCTTATTAGACCAACA+AGG 0.684350 8_2:-16295157 Msa1237040:intron
ATGAGGTGAGTATATCTGGA+TGG 0.692395 8_2:-16300519 Msa1237040:CDS
AGAAGCTTACCTATGAGGAG+CGG 0.703780 8_2:-16294046 Msa1237040:CDS
TAAGTGGCGTTGGATTCGAA+GGG 0.707986 8_2:-16300810 Msa1237040:CDS
AATATCACCAGCAATACTAG+CGG 0.722529 8_2:+16295113 None:intergenic
TATCTGGATGGCAAGCAGTG+GGG 0.726038 8_2:-16300507 Msa1237040:CDS
CCTACTGAAAGACCAAAGTG+TGG 0.729262 8_2:+16295060 None:intergenic
GAAAATCCTATTCCACGCAG+GGG 0.737306 8_2:+16300655 None:intergenic
GACAACAAATCGGTACTTGG+GGG 0.739465 8_2:+16296071 None:intergenic
GGTTGAAAGCTCTTACTCAG+CGG 0.742567 8_2:-16300876 Msa1237040:CDS
GAGTTATTCAAGTCTCACAG+GGG 0.770901 8_2:-16300340 Msa1237040:CDS
CAAGTGTCTTCAGAACACGA+CGG 0.780703 8_2:+16294903 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTATTTTGAGATTT+TGG - chr8_2:16293988-16294007 Msa1237040:CDS 10.0%
!!! AAAATATATTTTAAAACTTG+TGG - chr8_2:16295660-16295679 Msa1237040:intron 10.0%
!!! ATGATATATTTTCATTTATA+GGG - chr8_2:16296160-16296179 Msa1237040:intron 10.0%
!!! ATTAATCTTTTTTTTTTGAA+GGG - chr8_2:16298187-16298206 Msa1237040:intron 10.0%
!!! TTTCTTTTTACAAATTATTA+TGG + chr8_2:16299038-16299057 None:intergenic 10.0%
!!! TAATTAATGTTGATTTTTTA+TGG - chr8_2:16299884-16299903 Msa1237040:intron 10.0%
!!! AATTAATTATTGATTTCTTA+TGG - chr8_2:16300272-16300291 Msa1237040:intron 10.0%
!!! TTTATAAAATTGTTTTGTTT+GGG + chr8_2:16302148-16302167 None:intergenic 10.0%
!! AATAAAACATAAATATGTCA+TGG + chr8_2:16293956-16293975 None:intergenic 15.0%
!! AAATTTACAAAAACTTAATC+TGG - chr8_2:16294717-16294736 Msa1237040:CDS 15.0%
!!! TATTTATCAGTTGTTTTATA+AGG - chr8_2:16295624-16295643 Msa1237040:intron 15.0%
!!! CATGATATATTTTCATTTAT+AGG - chr8_2:16296159-16296178 Msa1237040:intron 15.0%
!! TCTAATATATGTATTACTTA+AGG + chr8_2:16296414-16296433 None:intergenic 15.0%
!!! TAGTTAATAATTTTACTTAG+TGG - chr8_2:16296472-16296491 Msa1237040:intron 15.0%
!!! TTTTATATCTTTAGATCTTA+AGG + chr8_2:16297511-16297530 None:intergenic 15.0%
!! CAAATAAGTTAAAATATAGT+GGG + chr8_2:16297746-16297765 None:intergenic 15.0%
!! ACAAATAAGTTAAAATATAG+TGG + chr8_2:16297747-16297766 None:intergenic 15.0%
!!! TTTAGAATAAGTTTTTTTAG+AGG + chr8_2:16298142-16298161 None:intergenic 15.0%
!!! GATTAATCTTTTTTTTTTGA+AGG - chr8_2:16298186-16298205 Msa1237040:intron 15.0%
!! TTTGACAAATAAATAAAGAT+CGG + chr8_2:16298744-16298763 None:intergenic 15.0%
!!! TTATATAGATTGATTTCAAT+GGG + chr8_2:16299145-16299164 None:intergenic 15.0%
!!! TTTTTTTTATGTGATTTAAC+TGG - chr8_2:16299843-16299862 Msa1237040:intron 15.0%
!! TTAAATTTAAATGAGAACAA+GGG + chr8_2:16300793-16300812 None:intergenic 15.0%
!! TTTAAATTTAAATGAGAACA+AGG + chr8_2:16300794-16300813 None:intergenic 15.0%
!!! AATTTTGGATAATTATAAGT+TGG - chr8_2:16301964-16301983 Msa1237040:intron 15.0%
!!! ATTTTGGATAATTATAAGTT+GGG - chr8_2:16301965-16301984 Msa1237040:intron 15.0%
!!! TGTTGGAATATTTTTTTTTA+AGG - chr8_2:16302112-16302131 Msa1237040:intron 15.0%
!!! GTTGGAATATTTTTTTTTAA+GGG - chr8_2:16302113-16302132 Msa1237040:intron 15.0%
!!! GTTTATAAAATTGTTTTGTT+TGG + chr8_2:16302149-16302168 None:intergenic 15.0%
!! TGAAAATATTAAGTTTCAGA+AGG - chr8_2:16293644-16293663 Msa1237040:three_prime_UTR 20.0%
!! AACCATGAAAAATAATAGTA+AGG + chr8_2:16294435-16294454 None:intergenic 20.0%
!! TGTATTCTCATTATAGAAAA+AGG - chr8_2:16295583-16295602 Msa1237040:intron 20.0%
!! TATTGTTAAGTAAAATAAGC+TGG - chr8_2:16296131-16296150 Msa1237040:CDS 20.0%
!!! ATTTATAGGGTGTATTTTTT+AGG - chr8_2:16296173-16296192 Msa1237040:intron 20.0%
!!! TTTTTAGGTAACTATCTTAT+TGG - chr8_2:16296188-16296207 Msa1237040:intron 20.0%
!! ATGAAAAAAAATTGATTGGA+AGG + chr8_2:16296291-16296310 None:intergenic 20.0%
!! GTGAATGAAAAAAAATTGAT+TGG + chr8_2:16296295-16296314 None:intergenic 20.0%
!!! ACAAATGTAATGTTATTTAG+TGG - chr8_2:16296374-16296393 Msa1237040:intron 20.0%
!!! AAAAAAAGCAGAAGTATATT+AGG - chr8_2:16296508-16296527 Msa1237040:intron 20.0%
!!! GTTTCTTAAACAATACTTTT+AGG - chr8_2:16296668-16296687 Msa1237040:intron 20.0%
!! AGAAAAGAAAAGAAAAGAAA+AGG - chr8_2:16297128-16297147 Msa1237040:intron 20.0%
!! GATTATATATCATATGTTAC+TGG + chr8_2:16297164-16297183 None:intergenic 20.0%
!!! TAAATATACAAACCTTTTGA+TGG - chr8_2:16297421-16297440 Msa1237040:intron 20.0%
!! AAGAAAAATATGTGAATTGA+GGG + chr8_2:16297538-16297557 None:intergenic 20.0%
!! AAGATTCAGAATATATAGAT+TGG + chr8_2:16297605-16297624 None:intergenic 20.0%
!! TTTAAATAATTGAGATCAAG+AGG + chr8_2:16298038-16298057 None:intergenic 20.0%
!! TTATTAATAACCTAGTTCAA+AGG - chr8_2:16298453-16298472 Msa1237040:intron 20.0%
!! GTAAATAGTATATTTGATCT+CGG + chr8_2:16298619-16298638 None:intergenic 20.0%
!! AAATAATTCGATTAGACATT+TGG + chr8_2:16298682-16298701 None:intergenic 20.0%
!! AATAAAAAGAGAGAAAAAGA+AGG + chr8_2:16298895-16298914 None:intergenic 20.0%
!!! TTCTTTTTCTCTCTTTTTAT+TGG - chr8_2:16298894-16298913 Msa1237040:intron 20.0%
!!! CTTTTTACAAATTATTATGG+TGG + chr8_2:16299035-16299054 None:intergenic 20.0%
!!! GTTATATAGATTGATTTCAA+TGG + chr8_2:16299146-16299165 None:intergenic 20.0%
!!! TGTATTGTGTTTTTTGAATT+AGG - chr8_2:16299470-16299489 Msa1237040:intron 20.0%
!! TTTGAATTAGGTTTATGTTA+AGG - chr8_2:16299482-16299501 Msa1237040:intron 20.0%
!! AAAAAAAATCTCAATTCATG+AGG + chr8_2:16299596-16299615 None:intergenic 20.0%
!!! TAAATAATCAGCATACATTT+TGG + chr8_2:16299626-16299645 None:intergenic 20.0%
!! TTACACAAAAAAAACCAAAA+GGG + chr8_2:16299969-16299988 None:intergenic 20.0%
!! ATTACACAAAAAAAACCAAA+AGG + chr8_2:16299970-16299989 None:intergenic 20.0%
!!! GTTTTTGATTAGCATTTTTA+AGG - chr8_2:16299992-16300011 Msa1237040:intron 20.0%
!! TCAATTGTTAGAAATGTTAT+TGG - chr8_2:16300028-16300047 Msa1237040:intron 20.0%
!! CAATTGTTAGAAATGTTATT+GGG - chr8_2:16300029-16300048 Msa1237040:intron 20.0%
!! AATTGTTAGAAATGTTATTG+GGG - chr8_2:16300030-16300049 Msa1237040:intron 20.0%
!! TTAATTGTTAAAATGCTAGT+CGG - chr8_2:16300161-16300180 Msa1237040:intron 20.0%
!!! TTATTTGTTGATTTTGTTAG+TGG - chr8_2:16300400-16300419 Msa1237040:CDS 20.0%
!! TAAGCTATCAAAAAGTTATA+AGG + chr8_2:16300521-16300540 None:intergenic 20.0%
!!! TTAGTTTAATCCTTTTAAAC+AGG - chr8_2:16301010-16301029 Msa1237040:CDS 20.0%
!! GATTCTAGTATGAAATAAAA+GGG + chr8_2:16301654-16301673 None:intergenic 20.0%
!! AGATTCTAGTATGAAATAAA+AGG + chr8_2:16301655-16301674 None:intergenic 20.0%
!! GCATGTAATAAATAATACTA+AGG + chr8_2:16301682-16301701 None:intergenic 20.0%
!!! TTTATTTGTTAATCTTGTGT+AGG - chr8_2:16301720-16301739 Msa1237040:CDS 20.0%
!!! GTTTATTGAGGTTAAAATTT+TGG - chr8_2:16301949-16301968 Msa1237040:intron 20.0%
!!! CCTTTACTTTTTTTATTAGT+CGG - chr8_2:16302052-16302071 Msa1237040:intron 20.0%
!! AAAAAATATTCCAACAAGAA+AGG + chr8_2:16302108-16302127 None:intergenic 20.0%
! TATTAAGTTTCAGAAGGATA+AGG - chr8_2:16293650-16293669 Msa1237040:three_prime_UTR 25.0%
! ATCTACTAATTACCATTACA+TGG - chr8_2:16293781-16293800 Msa1237040:three_prime_UTR 25.0%
! CTATAACTATTACCATGTAA+TGG + chr8_2:16293796-16293815 None:intergenic 25.0%
! TACCAAAAGTCTGTTAATAA+AGG - chr8_2:16294093-16294112 Msa1237040:intron 25.0%
!! ATCCTTTATTAACAGACTTT+TGG + chr8_2:16294098-16294117 None:intergenic 25.0%
!!! TGCCTTACTATTATTTTTCA+TGG - chr8_2:16294430-16294449 Msa1237040:intron 25.0%
! TTGAATAACTCTAATGCTAA+AGG + chr8_2:16295450-16295469 None:intergenic 25.0%
! CAAATATTTACCGATAATTC+TGG - chr8_2:16295734-16295753 Msa1237040:intron 25.0%
!!! GTACACTAGTATTGTTATTT+TGG - chr8_2:16295770-16295789 Msa1237040:intron 25.0%
!!! TTGCAGTATTAACTTGTTAA+GGG + chr8_2:16295821-16295840 None:intergenic 25.0%
!!! ATTGCAGTATTAACTTGTTA+AGG + chr8_2:16295822-16295841 None:intergenic 25.0%
! TGCATTACATATAATGAAGT+TGG + chr8_2:16296067-16296086 None:intergenic 25.0%
! TTAAGTCTTTAAGCTAGTTA+TGG + chr8_2:16296330-16296349 None:intergenic 25.0%
!! AGAGTATCAATATACTACTA+TGG - chr8_2:16296431-16296450 Msa1237040:intron 25.0%
! AAGTATCTTTAGTATCCTTA+GGG - chr8_2:16296542-16296561 Msa1237040:intron 25.0%
!!! TCAATTTTCAGTCTTGTTAT+AGG + chr8_2:16296891-16296910 None:intergenic 25.0%
! NNNNNNNNNTGTTGTGGGTT+GGG + chr8_2:16296934-16296953 None:intergenic 25.0%
! NNNNNNNNNNTGTTGTGGGT+TGG + chr8_2:16296935-16296954 None:intergenic 25.0%
! AACTATATTGTGTCAAAAAG+AGG - chr8_2:16297075-16297094 Msa1237040:intron 25.0%
! AAAAGAAAAGAAAAGGCTAA+TGG - chr8_2:16297135-16297154 Msa1237040:intron 25.0%
! ATCCCTACATGAAAATAAAA+AGG - chr8_2:16297181-16297200 Msa1237040:intron 25.0%
! TCCCTACATGAAAATAAAAA+GGG - chr8_2:16297182-16297201 Msa1237040:intron 25.0%
!!! TCCCTTTTTATTTTCATGTA+GGG + chr8_2:16297186-16297205 None:intergenic 25.0%
!!! TTCCCTTTTTATTTTCATGT+AGG + chr8_2:16297187-16297206 None:intergenic 25.0%
! TATCACTTATAGTTATCCTT+GGG + chr8_2:16297340-16297359 None:intergenic 25.0%
! ATGTGCATTCAATTACATTT+AGG + chr8_2:16297371-16297390 None:intergenic 25.0%
! AGAAAAATATGTGAATTGAG+GGG + chr8_2:16297537-16297556 None:intergenic 25.0%
! CAAGAAAAATATGTGAATTG+AGG + chr8_2:16297539-16297558 None:intergenic 25.0%
! ATATATAGATTGGACAATTC+TGG + chr8_2:16297595-16297614 None:intergenic 25.0%
!! GATATTGATATAACTAGCTT+TGG + chr8_2:16297667-16297686 None:intergenic 25.0%
!! TCAATTATTTAAAGCACGTT+TGG - chr8_2:16298045-16298064 Msa1237040:intron 25.0%
! ATTCTAAATGCAAAGTTCTT+AGG - chr8_2:16298154-16298173 Msa1237040:intron 25.0%
! AATCTTATATTGCCTATGAA+TGG - chr8_2:16298219-16298238 Msa1237040:intron 25.0%
!! CCAATATTTTATCCATTCAT+AGG + chr8_2:16298234-16298253 None:intergenic 25.0%
! CCTATGAATGGATAAAATAT+TGG - chr8_2:16298231-16298250 Msa1237040:intron 25.0%
! ATTTACAACAATAAGCGATA+TGG - chr8_2:16298633-16298652 Msa1237040:intron 25.0%
! AATAAGCGATATGGTTAAAA+TGG - chr8_2:16298642-16298661 Msa1237040:intron 25.0%
!!! GGAATGAAGTTTTATTCATT+CGG + chr8_2:16298769-16298788 None:intergenic 25.0%
! ATCATTACTCGATGTATTAA+TGG + chr8_2:16298829-16298848 None:intergenic 25.0%
! GTTCAAAAAATGCGATAAAA+TGG - chr8_2:16298987-16299006 Msa1237040:intron 25.0%
! GATCTAAGAAATTAAAGCTA+TGG + chr8_2:16299289-16299308 None:intergenic 25.0%
! ATTGTTAGAAATGTTATTGG+GGG - chr8_2:16300031-16300050 Msa1237040:intron 25.0%
!!! CTTTGAGATAAAAACCAAAA+GGG + chr8_2:16300069-16300088 None:intergenic 25.0%
!!! TCTTTGAGATAAAAACCAAA+AGG + chr8_2:16300070-16300089 None:intergenic 25.0%
! TAATTGTTAAAATGCTAGTC+GGG - chr8_2:16300162-16300181 Msa1237040:intron 25.0%
! TATAATTATCTCACATAACC+AGG + chr8_2:16300238-16300257 None:intergenic 25.0%
! AATTGTTTGTAATGCTAGTT+TGG - chr8_2:16300438-16300457 Msa1237040:CDS 25.0%
! CAAAAAGTTATAAGGTGATT+TGG + chr8_2:16300513-16300532 None:intergenic 25.0%
!! CTATTGTTAGTTGTTATTGT+TGG - chr8_2:16300595-16300614 Msa1237040:CDS 25.0%
!!! TAATGTTTTTAGTACCTTCA+AGG + chr8_2:16301144-16301163 None:intergenic 25.0%
!!! GTTGATTTGAATATTTGTGA+TGG - chr8_2:16301207-16301226 Msa1237040:CDS 25.0%
! AATATTTGTGATGGTTTACA+GGG - chr8_2:16301216-16301235 Msa1237040:CDS 25.0%
!! TCAATGTTATTCACAGATTT+TGG + chr8_2:16301439-16301458 None:intergenic 25.0%
! TTTAGTGAATACATCAAGAA+AGG - chr8_2:16301511-16301530 Msa1237040:CDS 25.0%
! TTCTCTGATTTCTTAATTGT+AGG + chr8_2:16301598-16301617 None:intergenic 25.0%
! CCGACTAATAAAAAAAGTAA+AGG + chr8_2:16302055-16302074 None:intergenic 25.0%
!! TTTGATAATACCTTTCTTGT+TGG - chr8_2:16302095-16302114 Msa1237040:intron 25.0%
AACCAAAATCTTGCAATGTT+TGG - chr8_2:16293599-16293618 Msa1237040:three_prime_UTR 30.0%
ACCAAAATCTTGCAATGTTT+GGG - chr8_2:16293600-16293619 Msa1237040:three_prime_UTR 30.0%
! TAGCACTTTTATGGATGTAA+GGG - chr8_2:16293683-16293702 Msa1237040:three_prime_UTR 30.0%
TATGATGTAACATGTTAGCT+TGG - chr8_2:16293749-16293768 Msa1237040:three_prime_UTR 30.0%
!! TGAATTTTTCTGACTTGACA+CGG - chr8_2:16293893-16293912 Msa1237040:three_prime_UTR 30.0%
TTGAAGATGTCAATTTCAGA+GGG + chr8_2:16294044-16294063 None:intergenic 30.0%
TTTGAAGATGTCAATTTCAG+AGG + chr8_2:16294045-16294064 None:intergenic 30.0%
! TAAATTGTTTTCCAGTCTCA+TGG - chr8_2:16294169-16294188 Msa1237040:intron 30.0%
CTGTAATGATCGAATCTTTA+CGG + chr8_2:16294325-16294344 None:intergenic 30.0%
ATATCCAAAATTTCAACCGT+CGG - chr8_2:16294509-16294528 Msa1237040:CDS 30.0%
TTAGAGTCTTTATCTCTATG+TGG - chr8_2:16294643-16294662 Msa1237040:intron 30.0%
TGTTTGAAAGTCACTAACTA+CGG - chr8_2:16294745-16294764 Msa1237040:CDS 30.0%
AGACTAATTGTTGTCAATGA+GGG + chr8_2:16294796-16294815 None:intergenic 30.0%
! TGACAACAATTAGTCTCTAT+CGG - chr8_2:16294800-16294819 Msa1237040:intron 30.0%
TGTCTTAACATTACTGATGA+AGG - chr8_2:16294823-16294842 Msa1237040:intron 30.0%
TAGATGTATCTTGCTTAAGT+TGG - chr8_2:16295106-16295125 Msa1237040:CDS 30.0%
TTCTATTATTGCAATAGCCA+AGG - chr8_2:16295218-16295237 Msa1237040:intron 30.0%
TCTATTATTGCAATAGCCAA+GGG - chr8_2:16295219-16295238 Msa1237040:intron 30.0%
TGCATCAATCTTACTGATAA+TGG - chr8_2:16295354-16295373 Msa1237040:intron 30.0%
ACAACCATTCAAGTACAAAA+TGG + chr8_2:16295415-16295434 None:intergenic 30.0%
TTGACATGATAATCTATACC+AGG + chr8_2:16295717-16295736 None:intergenic 30.0%
TTTACCGATAATTCTGGTAT+TGG - chr8_2:16295740-16295759 Msa1237040:intron 30.0%
CAATCCAATACCAGAATTAT+CGG + chr8_2:16295747-16295766 None:intergenic 30.0%
ACAAGTTAATACTGCAATAG+AGG - chr8_2:16295824-16295843 Msa1237040:intron 30.0%
TAGAGCTAAATTGGTCAAAT+AGG - chr8_2:16296033-16296052 Msa1237040:CDS 30.0%
AGAGCTAAATTGGTCAAATA+GGG - chr8_2:16296034-16296053 Msa1237040:CDS 30.0%
ACATATAATGAAGTTGGACA+TGG + chr8_2:16296061-16296080 None:intergenic 30.0%
! AAGTATTGCCAAATGTCAAA+GGG - chr8_2:16296086-16296105 Msa1237040:CDS 30.0%
CAAGTATCTTTAGTATCCTT+AGG - chr8_2:16296541-16296560 Msa1237040:intron 30.0%
!!! AATGCAAAAGTTGCTACTTT+TGG + chr8_2:16296579-16296598 None:intergenic 30.0%
!!! AAACAATACTTTTAGGACAC+TGG - chr8_2:16296675-16296694 Msa1237040:intron 30.0%
! GTTCGAGGTTAATATGTTTT+TGG + chr8_2:16296801-16296820 None:intergenic 30.0%
TATCTAGAAATTGTGTGAGT+GGG - chr8_2:16297279-16297298 Msa1237040:intron 30.0%
CTATCACTTATAGTTATCCT+TGG + chr8_2:16297341-16297360 None:intergenic 30.0%
AGAAGAATGATATGGTTGAT+AGG + chr8_2:16297481-16297500 None:intergenic 30.0%
!! ACTTTTATCAAGTTGTGGAT+TGG + chr8_2:16297568-16297587 None:intergenic 30.0%
! AATATAGTGGGACATATATG+TGG + chr8_2:16297734-16297753 None:intergenic 30.0%
! TAATGTCTTGAGATTTTGTG+TGG - chr8_2:16298259-16298278 Msa1237040:intron 30.0%
TAGGTCTAATACTACTTGTT+GGG + chr8_2:16298360-16298379 None:intergenic 30.0%
ATAGGTCTAATACTACTTGT+TGG + chr8_2:16298361-16298380 None:intergenic 30.0%
ACAAATCTCTCGATTTAGAT+AGG + chr8_2:16298379-16298398 None:intergenic 30.0%
ATCGAACTAATGAGAAATTC+TGG + chr8_2:16298502-16298521 None:intergenic 30.0%
TAAACCATTTAGTACGTCAT+GGG + chr8_2:16298569-16298588 None:intergenic 30.0%
TTAAACCATTTAGTACGTCA+TGG + chr8_2:16298570-16298589 None:intergenic 30.0%
TAAGTTCCAAGATATCTCAA+CGG + chr8_2:16298594-16298613 None:intergenic 30.0%
TAATTCGATTAGACATTTGG+TGG + chr8_2:16298679-16298698 None:intergenic 30.0%
GTTAGACATTCGATTCTTAT+GGG + chr8_2:16298790-16298809 None:intergenic 30.0%
TGTTAGACATTCGATTCTTA+TGG + chr8_2:16298791-16298810 None:intergenic 30.0%
TACTCGATGTATTAATGGTA+TGG + chr8_2:16298824-16298843 None:intergenic 30.0%
TCATACTTACCTTATGTTCT+TGG + chr8_2:16298956-16298975 None:intergenic 30.0%
!! AAAATGGATTATTGGGCTTT+GGG + chr8_2:16299115-16299134 None:intergenic 30.0%
! ATAGATTGATTTCAATGGGT+CGG + chr8_2:16299141-16299160 None:intergenic 30.0%
GAAACGAAATGAAGAGAAAA+TGG + chr8_2:16299264-16299283 None:intergenic 30.0%
AAGAAATGTCAGAATGAAAG+AGG + chr8_2:16299332-16299351 None:intergenic 30.0%
ATACAAATCGGACAACAAAT+CGG + chr8_2:16299741-16299760 None:intergenic 30.0%
CATAACTATAAGCTGACAAA+AGG + chr8_2:16299764-16299783 None:intergenic 30.0%
! TATGATTTTCATTGATGCAC+TGG - chr8_2:16299780-16299799 Msa1237040:intron 30.0%
AAAAAAAACCAAAAGGGTTG+TGG + chr8_2:16299963-16299982 None:intergenic 30.0%
GATAAAAACCAAAAGGGTTA+AGG + chr8_2:16300063-16300082 None:intergenic 30.0%
! AATTGATCGTTGCATTTTTG+TGG - chr8_2:16300125-16300144 Msa1237040:intron 30.0%
GAAGATGATGAAAACCAAAA+GGG + chr8_2:16300207-16300226 None:intergenic 30.0%
AATTGTTAGAAATGCTAGTG+AGG - chr8_2:16300310-16300329 Msa1237040:intron 30.0%
ATTGTTAGAAATGCTAGTGA+GGG - chr8_2:16300311-16300330 Msa1237040:intron 30.0%
AGAAAAAACCAAAAGGATTG+TGG + chr8_2:16300346-16300365 None:intergenic 30.0%
!!! TCCTTTTGGTTTTTTCTTCA+AGG - chr8_2:16300349-16300368 Msa1237040:CDS 30.0%
TCCTTGAAGAAAAAACCAAA+AGG + chr8_2:16300353-16300372 None:intergenic 30.0%
!!! TTTTTTCTTCAAGGAAGACA+TGG - chr8_2:16300358-16300377 Msa1237040:CDS 30.0%
! TATAAGGTGATTTGGAAAGA+GGG + chr8_2:16300505-16300524 None:intergenic 30.0%
! TTATAAGGTGATTTGGAAAG+AGG + chr8_2:16300506-16300525 None:intergenic 30.0%
GAATATTTGTGATGGTTTAC+AGG - chr8_2:16301215-16301234 Msa1237040:CDS 30.0%
ATACATCAAGAAAGGAATTG+AGG - chr8_2:16301519-16301538 Msa1237040:CDS 30.0%
AATTAAGAAATCAGAGAAGC+AGG - chr8_2:16301600-16301619 Msa1237040:CDS 30.0%
!!! AAATACCTCTTGTGTTGTTT+TGG + chr8_2:16301628-16301647 None:intergenic 30.0%
TTAACCTCAATAAACAGTAC+AGG + chr8_2:16301944-16301963 None:intergenic 30.0%
TGTAACAATATGAAGAGTTC+CGG - chr8_2:16302183-16302202 Msa1237040:CDS 30.0%
! TCCCAAACATTGCAAGATTT+TGG + chr8_2:16293604-16293623 None:intergenic 35.0%
!! TGGGATGAAGAGTTGATTTT+TGG - chr8_2:16293619-16293638 Msa1237040:three_prime_UTR 35.0%
GTTTCAGAAGGATAAGGATA+AGG - chr8_2:16293656-16293675 Msa1237040:three_prime_UTR 35.0%
! TAAGGACTCTAGCACTTTTA+TGG - chr8_2:16293674-16293693 Msa1237040:three_prime_UTR 35.0%
! CTAGCACTTTTATGGATGTA+AGG - chr8_2:16293682-16293701 Msa1237040:three_prime_UTR 35.0%
! AGCACTTTTATGGATGTAAG+GGG - chr8_2:16293684-16293703 Msa1237040:three_prime_UTR 35.0%
!! GAATTTTTCTGACTTGACAC+GGG - chr8_2:16293894-16293913 Msa1237040:three_prime_UTR 35.0%
CTTCATCAACCTGTGTAAAA+CGG + chr8_2:16294149-16294168 None:intergenic 35.0%
CAATATGAACCCCACATTTA+CGG + chr8_2:16294224-16294243 None:intergenic 35.0%
TTTCAAGACTCATCTGAAGA+AGG + chr8_2:16294348-16294367 None:intergenic 35.0%
TCTTCAGATGAGTCTTGAAA+AGG - chr8_2:16294348-16294367 Msa1237040:intron 35.0%
ATGGAAGATCTTTCCAAACT+TGG - chr8_2:16294376-16294395 Msa1237040:intron 35.0%
ATAATAGTAAGGCAGTCATC+TGG + chr8_2:16294424-16294443 None:intergenic 35.0%
! AATTTTGGATATGGAGCCAT+CGG + chr8_2:16294501-16294520 None:intergenic 35.0%
! GACGGTTGAAATTTTGGATA+TGG + chr8_2:16294510-16294529 None:intergenic 35.0%
TTTACACCGTCCATATTCAT+AGG - chr8_2:16294599-16294618 Msa1237040:intron 35.0%
TAGCAACCTATGAATATGGA+CGG + chr8_2:16294608-16294627 None:intergenic 35.0%
TCCATATTCATAGGTTGCTA+AGG - chr8_2:16294608-16294627 Msa1237040:intron 35.0%
TTTATCTCTATGTGGTTGCA+CGG - chr8_2:16294651-16294670 Msa1237040:intron 35.0%
GTTTGAAAGTCACTAACTAC+GGG - chr8_2:16294746-16294765 Msa1237040:CDS 35.0%
GAGACTAATTGTTGTCAATG+AGG + chr8_2:16294797-16294816 None:intergenic 35.0%
TTTCAAAGATAAGCAAGCAG+TGG + chr8_2:16294863-16294882 None:intergenic 35.0%
ATATTTGTGAGCAGTATGAC+AGG + chr8_2:16294894-16294913 None:intergenic 35.0%
ATACGTTAATAGCTTGAAGC+TGG + chr8_2:16294954-16294973 None:intergenic 35.0%
TAGGCTAAGTTTACAAGACT+CGG + chr8_2:16295043-16295062 None:intergenic 35.0%
TCTTGTAAACTTAGCCTAGA+AGG - chr8_2:16295045-16295064 Msa1237040:CDS 35.0%
CTTGTAAACTTAGCCTAGAA+GGG - chr8_2:16295046-16295065 Msa1237040:CDS 35.0%
TTGTAAACTTAGCCTAGAAG+GGG - chr8_2:16295047-16295066 Msa1237040:CDS 35.0%
!! TTCGGAAGTTTAGGATTTTG+AGG + chr8_2:16295176-16295195 None:intergenic 35.0%
ATCTACACATTCGGAAGTTT+AGG + chr8_2:16295185-16295204 None:intergenic 35.0%
CAGAAACTGATCTACACATT+CGG + chr8_2:16295194-16295213 None:intergenic 35.0%
GATGTACACTACTTGAAGAA+TGG - chr8_2:16295241-16295260 Msa1237040:intron 35.0%
GAACTTAGCATTATGTCATG+AGG - chr8_2:16295263-16295282 Msa1237040:intron 35.0%
! CTCTCCATTTTGTACTTGAA+TGG - chr8_2:16295408-16295427 Msa1237040:intron 35.0%
TAGAGTTATTCAAGTCTCAC+AGG - chr8_2:16295457-16295476 Msa1237040:intron 35.0%
AGAGTTATTCAAGTCTCACA+GGG - chr8_2:16295458-16295477 Msa1237040:intron 35.0%
TGTTTGCATAAAGGAAGAAG+AGG - chr8_2:16295485-16295504 Msa1237040:intron 35.0%
TCAACCAGTATCATCTGAAT+GGG + chr8_2:16295533-16295552 None:intergenic 35.0%
ATCAACCAGTATCATCTGAA+TGG + chr8_2:16295534-16295553 None:intergenic 35.0%
TGCATTATTTAGATACTGCC+TGG - chr8_2:16295696-16295715 Msa1237040:intron 35.0%
! CGATAATTCTGGTATTGGAT+TGG - chr8_2:16295745-16295764 Msa1237040:intron 35.0%
! TACACGTTTTACATTGTTGC+AGG - chr8_2:16296008-16296027 Msa1237040:intron 35.0%
TTGCAGGAATAGAGCTAAAT+TGG - chr8_2:16296024-16296043 Msa1237040:CDS 35.0%
! CAAGTATTGCCAAATGTCAA+AGG - chr8_2:16296085-16296104 Msa1237040:CDS 35.0%
AGTATTGCCAAATGTCAAAG+GGG - chr8_2:16296087-16296106 Msa1237040:CDS 35.0%
!! GACTCTATTATTTCTACGCT+AGG - chr8_2:16296705-16296724 Msa1237040:intron 35.0%
TTTGACACAATATAGTTGCC+TGG + chr8_2:16297072-16297091 None:intergenic 35.0%
TACTAACATGCAAGTTGTGA+TGG + chr8_2:16297217-16297236 None:intergenic 35.0%
AGATACACGTTACTCATTCT+CGG + chr8_2:16297264-16297283 None:intergenic 35.0%
GTATCTAGAAATTGTGTGAG+TGG - chr8_2:16297278-16297297 Msa1237040:intron 35.0%
TCTAAATGCTCAATATCCCA+AGG - chr8_2:16297321-16297340 Msa1237040:intron 35.0%
CTGATCAAAATGCCATCAAA+AGG + chr8_2:16297436-16297455 None:intergenic 35.0%
!! CTTTTGATGGCATTTTGATC+AGG - chr8_2:16297434-16297453 Msa1237040:intron 35.0%
GCATACTCAGAAGAATGATA+TGG + chr8_2:16297489-16297508 None:intergenic 35.0%
!! GACAGACTTTTATCAAGTTG+TGG + chr8_2:16297573-16297592 None:intergenic 35.0%
AGTGAAAATAAGCTTGTGCA+TGG - chr8_2:16297785-16297804 Msa1237040:intron 35.0%
TCAATGTTGGGTCACAAAAT+GGG + chr8_2:16297847-16297866 None:intergenic 35.0%
TTCAATGTTGGGTCACAAAA+TGG + chr8_2:16297848-16297867 None:intergenic 35.0%
TTTGTGACCCAACATTGAAT+TGG - chr8_2:16297849-16297868 Msa1237040:intron 35.0%
ACCATCTCCAATTCAATGTT+GGG + chr8_2:16297859-16297878 None:intergenic 35.0%
AACCATCTCCAATTCAATGT+TGG + chr8_2:16297860-16297879 None:intergenic 35.0%
AATTGGAGATGGTTCAAGAT+GGG - chr8_2:16297866-16297885 Msa1237040:intron 35.0%
AGTTTAGACGAATGTTAGGT+AGG + chr8_2:16298336-16298355 None:intergenic 35.0%
CTAATGAGAAATTCTGGTCA+AGG + chr8_2:16298496-16298515 None:intergenic 35.0%
TTTAAGCCGTTGAGATATCT+TGG - chr8_2:16298585-16298604 Msa1237040:intron 35.0%
GTTCCAATCAAATCGAACAT+GGG + chr8_2:16298712-16298731 None:intergenic 35.0%
TGTTCCAATCAAATCGAACA+TGG + chr8_2:16298713-16298732 None:intergenic 35.0%
!! CAAAATGGATTATTGGGCTT+TGG + chr8_2:16299116-16299135 None:intergenic 35.0%
!! TCGGGTCAAAATGGATTATT+GGG + chr8_2:16299122-16299141 None:intergenic 35.0%
! TAGATTGATTTCAATGGGTC+GGG + chr8_2:16299140-16299159 None:intergenic 35.0%
ATGAAGAGAAAATGGAAGAG+TGG + chr8_2:16299256-16299275 None:intergenic 35.0%
AACTTCCTTTGTGTCGTATA+TGG - chr8_2:16299413-16299432 Msa1237040:intron 35.0%
ACTTCCTTTGTGTCGTATAT+GGG - chr8_2:16299414-16299433 Msa1237040:intron 35.0%
AAAACCCATATACGACACAA+AGG + chr8_2:16299421-16299440 None:intergenic 35.0%
TTCTTCTCTTGAACTTGACT+TGG + chr8_2:16299539-16299558 None:intergenic 35.0%
TGTTCTTATCCTGGTTAATC+AGG + chr8_2:16299699-16299718 None:intergenic 35.0%
TGTTGTACTTGTTCTTATCC+TGG + chr8_2:16299708-16299727 None:intergenic 35.0%
GCTGACAAAAGGATACAAAT+CGG + chr8_2:16299753-16299772 None:intergenic 35.0%
GGAAGATGATGAAAACCAAA+AGG + chr8_2:16300208-16300227 None:intergenic 35.0%
TTGTTAGAAATGCTAGTGAG+GGG - chr8_2:16300312-16300331 Msa1237040:intron 35.0%
! AGTTGAATCCACAATCCTTT+TGG - chr8_2:16300335-16300354 Msa1237040:CDS 35.0%
! ATATGAGTTGGAGGGATTAA+AGG + chr8_2:16300480-16300499 None:intergenic 35.0%
AACTCCTTATTAGACCAACA+AGG - chr8_2:16300642-16300661 Msa1237040:CDS 35.0%
! ATGTCCTTGTTGGTCTAATA+AGG + chr8_2:16300649-16300668 None:intergenic 35.0%
AATATCACCAGCAATACTAG+CGG + chr8_2:16300689-16300708 None:intergenic 35.0%
! TACCTGCAGCATAATTTGTA+AGG + chr8_2:16300765-16300784 None:intergenic 35.0%
! AATCCTTTTAAACAGGCTAC+TGG - chr8_2:16301017-16301036 Msa1237040:CDS 35.0%
TCTTAACAAGACCAACATCA+AGG + chr8_2:16301094-16301113 None:intergenic 35.0%
AATATCCAAACCACCATCTA+GGG + chr8_2:16301244-16301263 None:intergenic 35.0%
ATATTCCTCACAGTGACAAA+AGG - chr8_2:16301259-16301278 Msa1237040:CDS 35.0%
TTCACCGCAAGTATATCTTT+GGG - chr8_2:16301325-16301344 Msa1237040:CDS 35.0%
TGTATTCACTAAAGTGAGTC+TGG + chr8_2:16301504-16301523 None:intergenic 35.0%
! GTTCTAGATATCCATCACTT+GGG + chr8_2:16301872-16301891 None:intergenic 35.0%
!! AGTTCTAGATATCCATCACT+TGG + chr8_2:16301873-16301892 None:intergenic 35.0%
! ATTATAAGTTGGGCTTTCAC+TGG - chr8_2:16301975-16301994 Msa1237040:intron 35.0%
!! TTTCACTGGTTCAACTTTCT+GGG - chr8_2:16301989-16302008 Msa1237040:intron 35.0%
! GCACTTTTATGGATGTAAGG+GGG - chr8_2:16293685-16293704 Msa1237040:three_prime_UTR 40.0%
TGTAAAACGGCTGAGATCAA+CGG + chr8_2:16294136-16294155 None:intergenic 40.0%
AAACTGCTTTGCCGTAAATG+TGG - chr8_2:16294210-16294229 Msa1237040:CDS 40.0%
AACTGCTTTGCCGTAAATGT+GGG - chr8_2:16294211-16294230 Msa1237040:CDS 40.0%
CGTAAATGTGGGGTTCATAT+TGG - chr8_2:16294222-16294241 Msa1237040:CDS 40.0%
! TGTGGGGTTCATATTGGTTA+TGG - chr8_2:16294228-16294247 Msa1237040:CDS 40.0%
GAGTCTTGAAAAGGTTGACA+TGG - chr8_2:16294357-16294376 Msa1237040:intron 40.0%
! CGTACTGATCGTGAATCATT+TGG - chr8_2:16294463-16294482 Msa1237040:CDS 40.0%
CCTTAGCAGACAAAGAAGAA+GGG + chr8_2:16294570-16294589 None:intergenic 40.0%
CCTTCTTCTTTGTCTGCTAA+GGG - chr8_2:16294568-16294587 Msa1237040:intron 40.0%
GCCTTAGCAACCTATGAATA+TGG + chr8_2:16294612-16294631 None:intergenic 40.0%
TTGAACCGTAGCTTAGCAAA+CGG + chr8_2:16294699-16294718 None:intergenic 40.0%
TGCTCACAAATATCCGACAA+AGG - chr8_2:16294901-16294920 Msa1237040:CDS 40.0%
GCTCACAAATATCCGACAAA+GGG - chr8_2:16294902-16294921 Msa1237040:CDS 40.0%
AAGAGCTTTCAACCCTTTGT+CGG + chr8_2:16294917-16294936 None:intergenic 40.0%
!! TTGCTTAAGTTGGTCACCAT+CGG - chr8_2:16295116-16295135 Msa1237040:CDS 40.0%
!!! GTTTAGGATTTTGAGGCTTG+AGG + chr8_2:16295169-16295188 None:intergenic 40.0%
TTCAAGTAGTGTACATCCCT+TGG + chr8_2:16295238-16295257 None:intergenic 40.0%
TGTCATGAGGTGAGTATATC+TGG - chr8_2:16295276-16295295 Msa1237040:intron 40.0%
ATGAGGTGAGTATATCTGGA+TGG - chr8_2:16295280-16295299 Msa1237040:intron 40.0%
CATGCAGTCTCTTCAAATTC+TGG + chr8_2:16295326-16295345 None:intergenic 40.0%
!! ATCTTACTGATAATGGCCTG+CGG - chr8_2:16295361-16295380 Msa1237040:intron 40.0%
GAGTTATTCAAGTCTCACAG+GGG - chr8_2:16295459-16295478 Msa1237040:intron 40.0%
TATCATCTGAATGGGGAGTA+AGG + chr8_2:16295525-16295544 None:intergenic 40.0%
CAACCAGTATCATCTGAATG+GGG + chr8_2:16295532-16295551 None:intergenic 40.0%
TTGTTAAGGGCTGAACATCT+TGG + chr8_2:16295808-16295827 None:intergenic 40.0%
GTACAACACGTTTAGTGTAC+AGG + chr8_2:16295933-16295952 None:intergenic 40.0%
AACTTCACCCCTTTGACATT+TGG + chr8_2:16296097-16296116 None:intergenic 40.0%
TTGGATGCTTAAATGCCCTA+AGG + chr8_2:16296560-16296579 None:intergenic 40.0%
!! TTATTTCTACGCTAGGCACA+AGG - chr8_2:16296712-16296731 Msa1237040:intron 40.0%
! TATTTCTACGCTAGGCACAA+GGG - chr8_2:16296713-16296732 Msa1237040:intron 40.0%
! TATAGGTGCTGTCTAACACT+AGG + chr8_2:16296874-16296893 None:intergenic 40.0%
TTCGATGGAGCATAAGAGAA+TGG + chr8_2:16297631-16297650 None:intergenic 40.0%
TATGCTCCATCGAAACAAGA+AGG - chr8_2:16297637-16297656 Msa1237040:intron 40.0%
TCTTGCTCTTGTGTGCAATT+TGG - chr8_2:16297688-16297707 Msa1237040:intron 40.0%
ACCCAACATTGAATTGGAGA+TGG - chr8_2:16297855-16297874 Msa1237040:intron 40.0%
GAATTGGAGATGGTTCAAGA+TGG - chr8_2:16297865-16297884 Msa1237040:intron 40.0%
! TGAGATTTTGTGTGGAGATG+TGG - chr8_2:16298267-16298286 Msa1237040:intron 40.0%
CAACAATGAGTCAATGCTCT+AGG + chr8_2:16298311-16298330 None:intergenic 40.0%
GGGTAGTTTAGACGAATGTT+AGG + chr8_2:16298340-16298359 None:intergenic 40.0%
TGTTGGACTACCTTTGAACT+AGG + chr8_2:16298466-16298485 None:intergenic 40.0%
CTGGTCAAGGTTCAATATGT+TGG + chr8_2:16298483-16298502 None:intergenic 40.0%
TAGTCCCATGACGTACTAAA+TGG - chr8_2:16298562-16298581 Msa1237040:intron 40.0%
! GAACCCATGTTCGATTTGAT+TGG - chr8_2:16298706-16298725 Msa1237040:intron 40.0%
AGAGAGAGACCAAGAACATA+AGG - chr8_2:16298944-16298963 Msa1237040:intron 40.0%
!! GTCGGGTCAAAATGGATTAT+TGG + chr8_2:16299123-16299142 None:intergenic 40.0%
TGTTAAGGCTCAGAAATCCA+AGG - chr8_2:16299497-16299516 Msa1237040:intron 40.0%
GTCAAGTTCAAGAGAAGAAG+AGG - chr8_2:16299540-16299559 Msa1237040:intron 40.0%
ATTCGATGATGAATCTGCAG+AGG - chr8_2:16299645-16299664 Msa1237040:intron 40.0%
TTCGATGATGAATCTGCAGA+GGG - chr8_2:16299646-16299665 Msa1237040:intron 40.0%
AATGCTACTGTATGCTACTG+TGG - chr8_2:16299928-16299947 Msa1237040:intron 40.0%
ATGCTACTGTATGCTACTGT+GGG - chr8_2:16299929-16299948 Msa1237040:intron 40.0%
! AGTTGAATCCACAACCCTTT+TGG - chr8_2:16299952-16299971 Msa1237040:intron 40.0%
! GGTTGAATCCTTAACCCTTT+TGG - chr8_2:16300052-16300071 Msa1237040:intron 40.0%
TTAGACCAACAAGGACATAG+TGG - chr8_2:16300651-16300670 Msa1237040:CDS 40.0%
!! TGTTCTGAAGACACTTGAGA+TGG - chr8_2:16300902-16300921 Msa1237040:CDS 40.0%
GCAAAGAACAGTGTCTAGAT+AGG + chr8_2:16300983-16301002 None:intergenic 40.0%
TCTCCAGTAGCCTGTTTAAA+AGG + chr8_2:16301023-16301042 None:intergenic 40.0%
! TTTTAAACAGGCTACTGGAG+AGG - chr8_2:16301022-16301041 Msa1237040:CDS 40.0%
GAATATCCAAACCACCATCT+AGG + chr8_2:16301245-16301264 None:intergenic 40.0%
! ACAGTGACAAAAGGTTTGCT+GGG - chr8_2:16301268-16301287 Msa1237040:CDS 40.0%
GTTCACCGCAAGTATATCTT+TGG - chr8_2:16301324-16301343 Msa1237040:CDS 40.0%
TCACCGCAAGTATATCTTTG+GGG - chr8_2:16301326-16301345 Msa1237040:CDS 40.0%
ACATGTTGCTGCATACATGA+AGG - chr8_2:16301350-16301369 Msa1237040:CDS 40.0%
! AAGTGAGTCTGGAATTTCTC+AGG + chr8_2:16301493-16301512 None:intergenic 40.0%
AAGAAAGGAATTGAGGCAGA+TGG - chr8_2:16301526-16301545 Msa1237040:CDS 40.0%
TCTGAAGAAGCTTACCTATG+AGG - chr8_2:16301748-16301767 Msa1237040:CDS 40.0%
!! TAATGCTGCTGTTGATGATG+AGG - chr8_2:16301808-16301827 Msa1237040:intron 40.0%
GTTGCCTGTACTGTTTATTG+AGG - chr8_2:16301937-16301956 Msa1237040:intron 40.0%
!! CTTTCACTGGTTCAACTTTC+TGG - chr8_2:16301988-16302007 Msa1237040:intron 40.0%
GCTGAGATCAACGGAAGAAA+AGG + chr8_2:16294127-16294146 None:intergenic 45.0%
!! TGATCTCAGCCGTTTTACAC+AGG - chr8_2:16294137-16294156 Msa1237040:intron 45.0%
ACTGCTTTGCCGTAAATGTG+GGG - chr8_2:16294212-16294231 Msa1237040:CDS 45.0%
AGAGAATCACCTGCACTTTG+TGG - chr8_2:16294258-16294277 Msa1237040:CDS 45.0%
! GTGAATTTTGTCAGAGAGCC+AGG + chr8_2:16294303-16294322 None:intergenic 45.0%
! GAGTCCGACGGTTGAAATTT+TGG + chr8_2:16294516-16294535 None:intergenic 45.0%
ACTCAAATTGCAGAGTCCGA+CGG + chr8_2:16294528-16294547 None:intergenic 45.0%
CCCTTCTTCTTTGTCTGCTA+AGG - chr8_2:16294567-16294586 Msa1237040:intron 45.0%
CCCTTAGCAGACAAAGAAGA+AGG + chr8_2:16294571-16294590 None:intergenic 45.0%
! CTAACCCGTTTGCTAAGCTA+CGG - chr8_2:16294691-16294710 Msa1237040:CDS 45.0%
TGAACCGTAGCTTAGCAAAC+GGG + chr8_2:16294698-16294717 None:intergenic 45.0%
GGTTGAAAGCTCTTACTCAG+CGG - chr8_2:16294923-16294942 Msa1237040:CDS 45.0%
TCACACTGTGAGCGTATAAG+TGG - chr8_2:16294973-16294992 Msa1237040:intron 45.0%
! ATAAGTGGCGTTGGATTCGA+AGG - chr8_2:16294988-16295007 Msa1237040:intron 45.0%
! TAAGTGGCGTTGGATTCGAA+GGG - chr8_2:16294989-16295008 Msa1237040:intron 45.0%
CTCTACATGCACGAGAGATT+TGG + chr8_2:16295019-16295038 None:intergenic 45.0%
CAAATCTCTCGTGCATGTAG+AGG - chr8_2:16295017-16295036 Msa1237040:intron 45.0%
TAAACTTAGCCTAGAAGGGG+TGG - chr8_2:16295050-16295069 Msa1237040:CDS 45.0%
!! TGCTTAAGTTGGTCACCATC+GGG - chr8_2:16295117-16295136 Msa1237040:CDS 45.0%
GAAAATCCTATTCCACGCAG+GGG + chr8_2:16295147-16295166 None:intergenic 45.0%
GGAAAATCCTATTCCACGCA+GGG + chr8_2:16295148-16295167 None:intergenic 45.0%
AGGAAAATCCTATTCCACGC+AGG + chr8_2:16295149-16295168 None:intergenic 45.0%
TATATCTGGATGGCAAGCAG+TGG - chr8_2:16295290-16295309 Msa1237040:intron 45.0%
ATATCTGGATGGCAAGCAGT+GGG - chr8_2:16295291-16295310 Msa1237040:intron 45.0%
!! TCTTACTGATAATGGCCTGC+GGG - chr8_2:16295362-16295381 Msa1237040:intron 45.0%
ACTCCCCATTCAGATGATAC+TGG - chr8_2:16295526-16295545 Msa1237040:intron 45.0%
ACCTGACTGACCATCTTTAG+TGG - chr8_2:16296258-16296277 Msa1237040:intron 45.0%
CCTGACTGACCATCTTTAGT+GGG - chr8_2:16296259-16296278 Msa1237040:intron 45.0%
CTGACTGACCATCTTTAGTG+GGG - chr8_2:16296260-16296279 Msa1237040:CDS 45.0%
AGGTTAGACCCCACTAAAGA+TGG + chr8_2:16296271-16296290 None:intergenic 45.0%
ATTTCTACGCTAGGCACAAG+GGG - chr8_2:16296714-16296733 Msa1237040:intron 45.0%
TAAGTGTGCAAGGATGCTGT+TGG + chr8_2:16296846-16296865 None:intergenic 45.0%
CTAGGAAGCTTAAGTGTGCA+AGG + chr8_2:16296856-16296875 None:intergenic 45.0%
TACCTCAAGCAACTACAACC+AGG - chr8_2:16297051-16297070 Msa1237040:intron 45.0%
TTGCATGTTACACACGAGCT+AGG - chr8_2:16298068-16298087 Msa1237040:intron 45.0%
ATGTGGCATCTCTCACTTTG+TGG - chr8_2:16298284-16298303 Msa1237040:intron 45.0%
GTACGTCATGGGACTAATCA+TGG + chr8_2:16298558-16298577 None:intergenic 45.0%
TTCAATGGGTCGGGTCAAAA+TGG + chr8_2:16299131-16299150 None:intergenic 45.0%
!! AGTTGATGGGAAGAGTGAGA+AGG + chr8_2:16299196-16299215 None:intergenic 45.0%
ACTCTTCCCATCAACTCTTG+CGG - chr8_2:16299200-16299219 Msa1237040:intron 45.0%
GTAACGCTTGAAGTAAGCCT+TGG + chr8_2:16299517-16299536 None:intergenic 45.0%
TAATCAGGCGAATACGAGCA+CGG + chr8_2:16299684-16299703 None:intergenic 45.0%
TCGTATTCGCCTGATTAACC+AGG - chr8_2:16299687-16299706 Msa1237040:intron 45.0%
GACAACAAATCGGTACTTGG+GGG + chr8_2:16299731-16299750 None:intergenic 45.0%
GGACAACAAATCGGTACTTG+GGG + chr8_2:16299732-16299751 None:intergenic 45.0%
CGGACAACAAATCGGTACTT+GGG + chr8_2:16299733-16299752 None:intergenic 45.0%
TCGGACAACAAATCGGTACT+TGG + chr8_2:16299734-16299753 None:intergenic 45.0%
!! TAGTCGGGTTGAATCCACAA+CGG - chr8_2:16300177-16300196 Msa1237040:intron 45.0%
CATCATCTTCCATGAAGACC+TGG - chr8_2:16300217-16300236 Msa1237040:intron 45.0%
CTCACATAACCAGGTCTTCA+TGG + chr8_2:16300229-16300248 None:intergenic 45.0%
! AGAGGGACATATGAGTTGGA+GGG + chr8_2:16300488-16300507 None:intergenic 45.0%
! AAGAGGGACATATGAGTTGG+AGG + chr8_2:16300489-16300508 None:intergenic 45.0%
GGAAAGAGGGACATATGAGT+TGG + chr8_2:16300492-16300511 None:intergenic 45.0%
! TTGTGCCACTATGTCCTTGT+TGG + chr8_2:16300659-16300678 None:intergenic 45.0%
ATAGTGTCCGCTAGTATTGC+TGG - chr8_2:16300679-16300698 Msa1237040:CDS 45.0%
TCTCATGAGCTACCACACTT+TGG - chr8_2:16300727-16300746 Msa1237040:CDS 45.0%
CCTACTGAAAGACCAAAGTG+TGG + chr8_2:16300742-16300761 None:intergenic 45.0%
! CCACACTTTGGTCTTTCAGT+AGG - chr8_2:16300739-16300758 Msa1237040:CDS 45.0%
GGCCTTACAAATTATGCTGC+AGG - chr8_2:16300760-16300779 Msa1237040:CDS 45.0%
ATGTGACCAGCTTATTGCAC+TGG - chr8_2:16300861-16300880 Msa1237040:CDS 45.0%
TTATTGCACTGGACTCCTCT+TGG - chr8_2:16300872-16300891 Msa1237040:CDS 45.0%
AAGTGTCTTCAGAACACGAC+GGG + chr8_2:16300898-16300917 None:intergenic 45.0%
CAAGTGTCTTCAGAACACGA+CGG + chr8_2:16300899-16300918 None:intergenic 45.0%
GAAGACACTTGAGATGGATG+AGG - chr8_2:16300908-16300927 Msa1237040:CDS 45.0%
! TGAGATGGATGAGGAGTATG+AGG - chr8_2:16300917-16300936 Msa1237040:CDS 45.0%
! GAGATGGATGAGGAGTATGA+GGG - chr8_2:16300918-16300937 Msa1237040:CDS 45.0%
GGAGTATGAGGGAAATGTTG+AGG - chr8_2:16300929-16300948 Msa1237040:CDS 45.0%
!! GGTCTTGTTAAGACCACTAC+TGG - chr8_2:16301101-16301120 Msa1237040:CDS 45.0%
AAAGACACGGTTTCCAGTAG+TGG + chr8_2:16301117-16301136 None:intergenic 45.0%
ACTACTGGAAACCGTGTCTT+TGG - chr8_2:16301116-16301135 Msa1237040:CDS 45.0%
! GCAAACCTTTTGTCACTGTG+AGG + chr8_2:16301267-16301286 None:intergenic 45.0%
CACAGTGACAAAAGGTTTGC+TGG - chr8_2:16301267-16301286 Msa1237040:CDS 45.0%
!! AAGGTTTGCTGGGTTTGACA+AGG - chr8_2:16301278-16301297 Msa1237040:CDS 45.0%
CACCGCAAGTATATCTTTGG+GGG - chr8_2:16301327-16301346 Msa1237040:CDS 45.0%
GTCCCCCAAAGATATACTTG+CGG + chr8_2:16301332-16301351 None:intergenic 45.0%
TGTAGGATCAGCACGAATTG+CGG + chr8_2:16301581-16301600 None:intergenic 45.0%
AGGCTCCAAAACAACACAAG+AGG - chr8_2:16301620-16301639 Msa1237040:CDS 45.0%
AGAAGCTTACCTATGAGGAG+CGG - chr8_2:16301753-16301772 Msa1237040:CDS 45.0%
TGACAAGCGTGAAACCAACT+TGG + chr8_2:16301783-16301802 None:intergenic 45.0%
GCATCACACTGATGCATAAC+CGG + chr8_2:16302205-16302224 None:intergenic 45.0%
GAACGAGACAACCATGAGAC+TGG + chr8_2:16294183-16294202 None:intergenic 50.0%
TGTGAGCCTTCCATTTCACC+TGG - chr8_2:16294282-16294301 Msa1237040:CDS 50.0%
AGAGAGCCAGGTGAAATGGA+AGG + chr8_2:16294291-16294310 None:intergenic 50.0%
TGTCAGAGAGCCAGGTGAAA+TGG + chr8_2:16294295-16294314 None:intergenic 50.0%
GATGGAGGTAGCACCAAGTT+TGG + chr8_2:16294392-16294411 None:intergenic 50.0%
ATCTGGTAAGTGCACGATGG+AGG + chr8_2:16294407-16294426 None:intergenic 50.0%
GTCATCTGGTAAGTGCACGA+TGG + chr8_2:16294410-16294429 None:intergenic 50.0%
TTTGGATATGGAGCCATCGG+CGG + chr8_2:16294498-16294517 None:intergenic 50.0%
GGGACAACCAGAAGCAACTA+GGG + chr8_2:16294776-16294795 None:intergenic 50.0%
AGGGACAACCAGAAGCAACT+AGG + chr8_2:16294777-16294796 None:intergenic 50.0%
TGTGAGCGTATAAGTGGCGT+TGG - chr8_2:16294979-16294998 Msa1237040:intron 50.0%
TATCTGGATGGCAAGCAGTG+GGG - chr8_2:16295292-16295311 Msa1237040:intron 50.0%
CAGGGGCGATGTTTGCATAA+AGG - chr8_2:16295476-16295495 Msa1237040:intron 50.0%
CCCACTAAAGATGGTCAGTC+AGG + chr8_2:16296262-16296281 None:intergenic 50.0%
TTTCTACGCTAGGCACAAGG+GGG - chr8_2:16296715-16296734 Msa1237040:intron 50.0%
GAAGAAGCTCTGTGTGTTCG+AGG + chr8_2:16296816-16296835 None:intergenic 50.0%
CAAGGATGCTGTTGGAGCTT+AGG + chr8_2:16296838-16296857 None:intergenic 50.0%
TGCCTGGTTGTAGTTGCTTG+AGG + chr8_2:16297056-16297075 None:intergenic 50.0%
GCTCCATCGAAACAAGAAGG+AGG - chr8_2:16297640-16297659 Msa1237040:intron 50.0%
! GGTCCTCCTTCTTGTTTCGA+TGG + chr8_2:16297646-16297665 None:intergenic 50.0%
!! TGGATTATTGGGCTTTGGGC+TGG + chr8_2:16299111-16299130 None:intergenic 50.0%
! GGGTTTGAGAGGCAAGGTTT+TGG + chr8_2:16299168-16299187 None:intergenic 50.0%
AGAAGGAGCTAGGGTTTGAG+AGG + chr8_2:16299179-16299198 None:intergenic 50.0%
GGAAGAGTGAGAAGGAGCTA+GGG + chr8_2:16299188-16299207 None:intergenic 50.0%
! CTGGATCCGCAAGAGTTGAT+GGG + chr8_2:16299209-16299228 None:intergenic 50.0%
! TCCACAACGGACAACCCTTT+TGG - chr8_2:16300190-16300209 Msa1237040:intron 50.0%
ACCAAAAGGGTTGTCCGTTG+TGG + chr8_2:16300194-16300213 None:intergenic 50.0%
AGGAGTCCAGTGCAATAAGC+TGG + chr8_2:16300870-16300889 None:intergenic 50.0%
! ACATCAAGGAGAGCACGGAA+TGG + chr8_2:16301080-16301099 None:intergenic 50.0%
TTCCGTGCTCTCCTTGATGT+TGG - chr8_2:16301080-16301099 Msa1237040:CDS 50.0%
GACCAACATCAAGGAGAGCA+CGG + chr8_2:16301085-16301104 None:intergenic 50.0%
! CCTTCAAGGCACCAAAGACA+CGG + chr8_2:16301130-16301149 None:intergenic 50.0%
GAAGAAAGAGCTCGATGCTG+AGG - chr8_2:16301302-16301321 Msa1237040:CDS 50.0%
CTCAGGCTCATCTTCAGTCA+AGG + chr8_2:16301476-16301495 None:intergenic 50.0%
! AATTGAGGCAGATGGCCTTG+AGG - chr8_2:16301534-16301553 Msa1237040:CDS 50.0%
CCTTCTTGTACAGCTCCTCA+AGG + chr8_2:16301552-16301571 None:intergenic 50.0%
CCTTGAGGAGCTGTACAAGA+AGG - chr8_2:16301549-16301568 Msa1237040:CDS 50.0%
!! TGCTGTTGATGATGAGGACG+AGG - chr8_2:16301814-16301833 Msa1237040:intron 50.0%
TGTGTTTGCAGCCCAAGTGA+TGG - chr8_2:16301858-16301877 Msa1237040:intron 50.0%
!! TTTGGTGTCCACTGCAGCTG+CGG - chr8_2:16294006-16294025 Msa1237040:CDS 55.0%
GGCTCACATCCACAAAGTGC+AGG + chr8_2:16294270-16294289 None:intergenic 55.0%
TGCACGGAGCTCGATGATTC+AGG - chr8_2:16294667-16294686 Msa1237040:intron 55.0%
GGGCTATCCCTAGTTGCTTC+TGG - chr8_2:16294766-16294785 Msa1237040:CDS 55.0%
CTTAGCCTAGAAGGGGTGGT+CGG - chr8_2:16295054-16295073 Msa1237040:CDS 55.0%
CAATTCCGACCACCCCTTCT+AGG + chr8_2:16295062-16295081 None:intergenic 55.0%
GGGGTGGTCGGAATTGTTAG+CGG - chr8_2:16295066-16295085 Msa1237040:CDS 55.0%
GTGGTCGGAATTGTTAGCGG+TGG - chr8_2:16295069-16295088 Msa1237040:CDS 55.0%
GTCGGAATTGTTAGCGGTGG+CGG - chr8_2:16295072-16295091 Msa1237040:CDS 55.0%
TTCTACGCTAGGCACAAGGG+GGG - chr8_2:16296716-16296735 Msa1237040:intron 55.0%
GAGCTAGGGTTTGAGAGGCA+AGG + chr8_2:16299174-16299193 None:intergenic 55.0%
GGGAAGAGTGAGAAGGAGCT+AGG + chr8_2:16299189-16299208 None:intergenic 55.0%
GCTGGATCCGCAAGAGTTGA+TGG + chr8_2:16299210-16299229 None:intergenic 55.0%
TCCAGCTGCGTCTGCAACAA+TGG - chr8_2:16299224-16299243 Msa1237040:intron 55.0%
ACCATTGTTGCAGACGCAGC+TGG + chr8_2:16299228-16299247 None:intergenic 55.0%
!! CCGTGTCTTTGGTGCCTTGA+AGG - chr8_2:16301127-16301146 Msa1237040:CDS 55.0%
GGTTTACAGGGAGCCCTAGA+TGG - chr8_2:16301228-16301247 Msa1237040:CDS 55.0%
TTACAGGGAGCCCTAGATGG+TGG - chr8_2:16301231-16301250 Msa1237040:CDS 55.0%
! CTTGGCTTTCCGCTCCTCAT+AGG + chr8_2:16301765-16301784 None:intergenic 55.0%
TGAGGAGCGGAAAGCCAAGT+TGG - chr8_2:16301766-16301785 Msa1237040:CDS 55.0%
!! TTGGCTTGACTTGCCGCCGA+TGG - chr8_2:16294482-16294501 Msa1237040:CDS 60.0%
GGAGATCCCCTGCGTGGAAT+AGG - chr8_2:16295138-16295157 Msa1237040:CDS 60.0%
AACCGTCTCGTAATGCCCGC+AGG + chr8_2:16295380-16295399 None:intergenic 60.0%
TCAGAACACGACGGGCCAAG+AGG + chr8_2:16300890-16300909 None:intergenic 60.0%
CAGTTGAGCCAGCTGAGTCC+AGG - chr8_2:16301051-16301070 Msa1237040:CDS 60.0%
TTGAGCCAGCTGAGTCCAGG+AGG - chr8_2:16301054-16301073 Msa1237040:CDS 60.0%
AATGGCCTCCTGGACTCAGC+TGG + chr8_2:16301062-16301081 None:intergenic 60.0%
! GGGAGCCCTAGATGGTGGTT+TGG - chr8_2:16301236-16301255 Msa1237040:CDS 60.0%
GATCAGCACGAATTGCGGCG+TGG + chr8_2:16301576-16301595 None:intergenic 60.0%
CACAAGAGCCGCAGCTGCAG+TGG + chr8_2:16294017-16294036 None:intergenic 65.0%
CACTGCAGCTGCGGCTCTTG+TGG - chr8_2:16294015-16294034 Msa1237040:CDS 65.0%
GGCCTGCGGGCATTACGAGA+CGG - chr8_2:16295375-16295394 Msa1237040:intron 65.0%
! GAGAGCACGGAATGGCCTCC+TGG + chr8_2:16301072-16301091 None:intergenic 65.0%
CCACGCAGGGGATCTCCCGA+TGG + chr8_2:16295135-16295154 None:intergenic 70.0%
CCATCGGGAGATCCCCTGCG+TGG - chr8_2:16295132-16295151 Msa1237040:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 16293580 16302241 16293580 ID=Msa1237040;Name=Msa1237040
chr8_2 mRNA 16293580 16302241 16293580 ID=Msa1237040-mRNA-1;Parent=Msa1237040;Name=Msa1237040-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.6|0.63|0.90|1|1|11|391|838
chr8_2 exon 16293580 16294079 16293580 ID=Msa1237040-mRNA-1:exon:6155;Parent=Msa1237040-mRNA-1
chr8_2 exon 16294180 16294349 16294180 ID=Msa1237040-mRNA-1:exon:6154;Parent=Msa1237040-mRNA-1
chr8_2 exon 16294450 16294584 16294450 ID=Msa1237040-mRNA-1:exon:6153;Parent=Msa1237040-mRNA-1
chr8_2 exon 16294673 16294789 16294673 ID=Msa1237040-mRNA-1:exon:6152;Parent=Msa1237040-mRNA-1
chr8_2 exon 16294871 16294950 16294871 ID=Msa1237040-mRNA-1:exon:6151;Parent=Msa1237040-mRNA-1
chr8_2 exon 16295040 16295166 16295040 ID=Msa1237040-mRNA-1:exon:6150;Parent=Msa1237040-mRNA-1
chr8_2 exon 16296020 16296156 16296020 ID=Msa1237040-mRNA-1:exon:6149;Parent=Msa1237040-mRNA-1
chr8_2 exon 16296260 16296329 16296260 ID=Msa1237040-mRNA-1:exon:6148;Parent=Msa1237040-mRNA-1
chr8_2 exon 16300315 16301466 16300315 ID=Msa1237040-mRNA-1:exon:6147;Parent=Msa1237040-mRNA-1
chr8_2 exon 16301498 16301798 16301498 ID=Msa1237040-mRNA-1:exon:6146;Parent=Msa1237040-mRNA-1
chr8_2 exon 16302123 16302241 16302123 ID=Msa1237040-mRNA-1:exon:6145;Parent=Msa1237040-mRNA-1
chr8_2 CDS 16302123 16302241 16302123 ID=Msa1237040-mRNA-1:cds;Parent=Msa1237040-mRNA-1
chr8_2 CDS 16301498 16301798 16301498 ID=Msa1237040-mRNA-1:cds;Parent=Msa1237040-mRNA-1
chr8_2 CDS 16300315 16301466 16300315 ID=Msa1237040-mRNA-1:cds;Parent=Msa1237040-mRNA-1
chr8_2 CDS 16296260 16296329 16296260 ID=Msa1237040-mRNA-1:cds;Parent=Msa1237040-mRNA-1
chr8_2 CDS 16296020 16296156 16296020 ID=Msa1237040-mRNA-1:cds;Parent=Msa1237040-mRNA-1
chr8_2 CDS 16295040 16295166 16295040 ID=Msa1237040-mRNA-1:cds;Parent=Msa1237040-mRNA-1
chr8_2 CDS 16294871 16294950 16294871 ID=Msa1237040-mRNA-1:cds;Parent=Msa1237040-mRNA-1
chr8_2 CDS 16294673 16294789 16294673 ID=Msa1237040-mRNA-1:cds;Parent=Msa1237040-mRNA-1
chr8_2 CDS 16294450 16294584 16294450 ID=Msa1237040-mRNA-1:cds;Parent=Msa1237040-mRNA-1
chr8_2 CDS 16294180 16294349 16294180 ID=Msa1237040-mRNA-1:cds;Parent=Msa1237040-mRNA-1
chr8_2 CDS 16293971 16294079 16293971 ID=Msa1237040-mRNA-1:cds;Parent=Msa1237040-mRNA-1
chr8_2 three_prime_UTR 16293580 16293970 16293580 ID=Msa1237040-mRNA-1:three_prime_utr;Parent=Msa1237040-mRNA-1
Gene Sequence

>Msa1237040

ATGGGTTTTAAGATTTGGAAACCAAAATCTTGCAATGTTTGGGATGAAGAGTTGATTTTTGGTTTGAAAATATTAAGTTTCAGAAGGATAAGGATAAGGACTCTAGCACTTTTATGGATCTGCGGCTCTTGTGGATACCCTCTGAAATTGACATCTTCAAATCGTATCACATCTAACATTGCATCAGAATACCAAAAGTCTGTTAATAAAGGATCAATCTCCTTTTCTTCCGTTGATCTCAGCCGTTTTACACAGGTTGATGAAGTAAATTGTTTTCCAGTCTCATGGTTGTCTCGTTCAAAGACTAAACTGCTTTGCCGTAAATGTGGGGTTCATATTGGTTATGGTTATAGTAGAGAATCACCTGCACTTTGTGGATGTGAGCCTTCCATTTCACCTGGCTCTCTGACAAAATTCACCATGAGTCTTGAAAAGGTTGACATGGAAGATCTTTCCAAACTTGGTGCTACCTCCATCGTGCACTTACCAGATGACTGCCTTACTATTATTTTTCATGGTTTAGATTGTCGTACTGATCGTGAATCATTTGGCTTGACTTGCCGCCGATGGCTCCATATCCAAAATTTCAACCGTCGGACTCTGCAATTTGAGTGTTCATTTAGTATATTAAACCCTTCTTCTTTGTCTGCTAAGGGTCTTGATGTTTACACCGTCCATATTCATAGGTTGCTAAGGCGCTTTCAACATTTAGAGTCTTTATCTCTATGTGGTTGCACGGAGCTCGATGATTCAGGACTAACCCGTTTGCTAAGCTACGGTTCAAATTTACAAAAACTTAATCTGGATTGTTGTTTGAAAGTCACTAACTACGGGCTATCCCTAGTTGCTTCTGGTTGTCCCTCATTGACAACAATTAGTCTCTATCGGTGTCTTAACATTACTGATGAAGGATTAGAGACTTTAACCACTGCTTGCTTATCTTTGAAATGCATAAACCTGTCATACTGCTCACAAATATCCGACAAAGGGTTGAAAGCTCTTACTCAGCGGTGTCGCCAGCTTCAAGCTATTAACGTATCACACTGTGAGCGTATAAGTGGCGTTGGATTCGAAGGGTGTTCCAAATCTCTCGTGCATGTAGAGGCCGAGTCTTGTAAACTTAGCCTAGAAGGGGTGGTCGGAATTGTTAGCGGTGGCGGAATAGAGTATCTAGATGTATCTTGCTTAAGTTGGTCACCATCGGGAGATCCCCTGCGTGGAATAGGATTTTCCTCAAGCCTCAAAATCCTAAACTTCCGAATGTGTAGATCAGTTTCTGATGCTTCTATTATTGCAATAGCCAAGGGATGTACACTACTTGAAGAATGGAACTTAGCATTATGTCATGAGGTGAGTATATCTGGATGGCAAGCAGTGGGGCTATATTGCCAGAATTTGAAGAGACTGCATGTGAATAGATGCATCAATCTTACTGATAATGGCCTGCGGGCATTACGAGACGGTTGCAAAAGTCTCTCCATTTTGTACTTGAATGGTTGTGCTCGAGTGACGCCTTTAGCATTAGAGTTATTCAAGTCTCACAGGGGCGATGTTTGCATAAAGGAAGAAGAGGTTTATGTTAAGGCTCAGAAATCCAAGGCTTACTTCAAGCGTTACCAAGTCAAGTTCAAGAGAAGAAGAGAGGGAAAGACTGATTACCGTGCTCGTATTCGCCTGATTAACCAGGATAAGAACAAGTACAACACCCCCAAGTACCGATTTGTTGTCCGATTTGTATCCTTTTGTCAGCTTATAGTTATGATTTTCATTGATGCACTGACCAACAAGGACATAGTGGCACAAATAGTGTCCGCTAGTATTGCTGGTGATATTGTTCTTGCTGCTGCATATTCTCATGAGCTACCACACTTTGGTCTTTCAGTAGGCCTTACAAATTATGCTGCAGCTTATTGCACTGGACTCCTCTTGGCCCGTCGTGTTCTGAAGACACTTGAGATGGATGAGGAGTATGAGGGAAATGTTGAGGCTACTGGAGAGGATTATTCAGTTGAGCCAGCTGAGTCCAGGAGGCCATTCCGTGCTCTCCTTGATGTTGGTCTTGTTAAGACCACTACTGGAAACCGTGTCTTTGGTGCCTTGAAGGGAGCCCTAGATGGTGGTTTGGATATTCCTCACAGTGACAAAAGGTTTGCTGGGTTTGACAAGGAGAAGAAAGAGCTCGATGCTGAGGTTCACCGCAAGTATATCTTTGGGGGACATGTTGCTGCATACATGAAGACCTTGACTGAAGATGAGCCTGAGAAATTCCAGACTCACTTTAGTGAATACATCAAGAAAGGAATTGAGGCAGATGGCCTTGAGGAGCTGTACAAGAAGGTCCACGCCGCAATTCGTGCTGATCCTACAATTAAGAAATCAGAGAAGCAGGCTCCAAAACAACACAAGAGGTATAATCTGAAGAAGCTTACCTATGAGGAGCGGAAAGCCAAGTTGGTTTCACGCTTGTCAGCTCTTAATGCTGCTGTTGATGATGAGGACGAGGATGACGATGAGTGA
Protein sequence

>Msa1237040

MGFKIWKPKSCNVWDEELIFGLKILSFRRIRIRTLALLWICGSCGYPLKLTSSNRITSNIASEYQKSVNKGSISFSSVDLSRFTQVDEVNCFPVSWLSRSKTKLLCRKCGVHIGYGYSRESPALCGCEPSISPGSLTKFTMSLEKVDMEDLSKLGATSIVHLPDDCLTIIFHGLDCRTDRESFGLTCRRWLHIQNFNRRTLQFECSFSILNPSSLSAKGLDVYTVHIHRLLRRFQHLESLSLCGCTELDDSGLTRLLSYGSNLQKLNLDCCLKVTNYGLSLVASGCPSLTTISLYRCLNITDEGLETLTTACLSLKCINLSYCSQISDKGLKALTQRCRQLQAINVSHCERISGVGFEGCSKSLVHVEAESCKLSLEGVVGIVSGGGIEYLDVSCLSWSPSGDPLRGIGFSSSLKILNFRMCRSVSDASIIAIAKGCTLLEEWNLALCHEVSISGWQAVGLYCQNLKRLHVNRCINLTDNGLRALRDGCKSLSILYLNGCARVTPLALELFKSHRGDVCIKEEEVYVKAQKSKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFVSFCQLIVMIFIDALTNKDIVAQIVSASIAGDIVLAAAYSHELPHFGLSVGLTNYAAAYCTGLLLARRVLKTLEMDEEYEGNVEATGEDYSVEPAESRRPFRALLDVGLVKTTTGNRVFGALKGALDGGLDIPHSDKRFAGFDKEKKELDAEVHRKYIFGGHVAAYMKTLTEDEPEKFQTHFSEYIKKGIEADGLEELYKKVHAAIRADPTIKKSEKQAPKQHKRYNLKKLTYEERKAKLVSRLSALNAAVDDEDEDDDE*