AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0604740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0604740 MtrunA17_Chr4g0034411 69.632 517 79 6 27 471 1 511 0.0 676
Msa0604740 MtrunA17_Chr5g0443991 65.326 522 93 9 27 471 1 511 0.0 614
Msa0604740 MtrunA17_Chr2g0307471 36.279 430 222 14 78 463 97 518 3.67e-61 209
Msa0604740 MtrunA17_Chr4g0062301 34.442 421 223 12 85 463 116 525 3.77e-56 196
Msa0604740 MtrunA17_Chr3g0114081 32.462 459 241 12 67 469 20 465 5.17e-50 179
Msa0604740 MtrunA17_CPg0492961 98.780 82 1 0 138 219 57 138 2.30e-48 164
Msa0604740 MtrunA17_Chr2g0300291 32.277 347 188 12 89 397 164 501 5.63e-37 144
Msa0604740 MtrunA17_Chr6g0483491 31.624 351 191 10 91 403 35 374 1.66e-36 139
Msa0604740 MtrunA17_Chr7g0236841 31.534 352 192 10 90 403 34 374 2.18e-36 139
Msa0604740 MtrunA17_Chr3g0098121 32.092 349 185 13 89 397 175 511 2.27e-36 142
Msa0604740 MtrunA17_Chr3g0107851 30.707 368 190 13 89 402 140 496 1.93e-35 139
Msa0604740 MtrunA17_Chr8g0347161 29.947 374 199 10 88 410 124 485 4.47e-35 137
Msa0604740 MtrunA17_Chr1g0176041 28.833 437 210 14 59 429 144 545 6.93e-35 137
Msa0604740 MtrunA17_Chr2g0330401 30.471 361 200 10 83 401 113 464 5.49e-34 134
Msa0604740 MtrunA17_Chr8g0347171 30.295 373 199 11 88 410 182 543 1.21e-33 134
Msa0604740 MtrunA17_Chr8g0347151 29.730 370 205 9 88 410 223 584 4.46e-33 132
Msa0604740 MtrunA17_Chr7g0271121 31.268 355 179 10 91 398 131 467 2.19e-31 128
Msa0604740 MtrunA17_Chr5g0442191 29.395 347 194 9 91 398 106 440 6.46e-31 125
Msa0604740 MtrunA17_Chr8g0386451 27.934 426 243 15 73 447 295 707 2.95e-30 124
Msa0604740 MtrunA17_Chr1g0157691 28.090 356 200 9 82 392 163 507 4.27e-30 123
Msa0604740 MtrunA17_Chr1g0200181 28.532 361 200 10 82 395 161 510 7.14e-30 122
Msa0604740 MtrunA17_Chr2g0293631 30.145 345 194 11 82 390 512 845 2.15e-29 122
Msa0604740 MtrunA17_Chr1g0193491 29.379 354 200 10 85 398 133 476 1.00e-27 116
Msa0604740 MtrunA17_Chr2g0310581 29.248 359 181 10 91 399 78 413 2.59e-26 111
Msa0604740 MtrunA17_Chr8g0354761 26.562 448 262 15 59 458 2 430 1.99e-25 108
Msa0604740 MtrunA17_Chr4g0003441 24.646 353 193 12 83 386 125 453 1.49e-22 100
Msa0604740 MtrunA17_Chr6g0466611 27.424 361 202 12 89 398 165 516 8.29e-21 95.9
Msa0604740 MtrunA17_Chr1g0192021 24.422 389 209 9 89 399 49 430 1.31e-20 95.1
Msa0604740 MtrunA17_Chr4g0062321 36.527 167 64 6 218 346 67 229 1.52e-20 90.9
Msa0604740 MtrunA17_Chr2g0301281 32.864 213 108 7 292 470 361 572 3.01e-20 94.0
Msa0604740 MtrunA17_Chr2g0301281 28.704 216 125 6 85 277 61 270 1.33e-12 70.1
Msa0604740 MtrunA17_Chr8g0342861 26.519 362 212 14 92 415 68 413 1.16e-19 90.9
Msa0604740 MtrunA17_Chr1g0149251 23.988 346 189 13 104 399 2 323 3.88e-19 88.6
Msa0604740 MtrunA17_Chr4g0029191 31.925 213 110 7 292 470 364 575 6.59e-19 89.7
Msa0604740 MtrunA17_Chr4g0029191 29.630 216 123 7 85 277 64 273 4.48e-13 71.6
Msa0604740 MtrunA17_Chr2g0297261 25.424 354 191 12 92 398 61 388 6.17e-18 85.9
Msa0604740 MtrunA17_Chr4g0070981 26.243 362 213 14 92 415 68 413 7.70e-18 85.5
Msa0604740 MtrunA17_Chr2g0299681 25.208 361 218 13 92 415 68 413 3.34e-17 83.6
Msa0604740 MtrunA17_Chr4g0039471 33.333 177 108 4 91 265 248 416 7.84e-17 82.4
Msa0604740 MtrunA17_Chr2g0329931 25.364 343 205 12 92 398 68 395 7.85e-17 82.4
Msa0604740 MtrunA17_Chr3g0137901 35.106 94 58 3 308 399 67 159 8.72e-13 66.6
Msa0604740 MtrunA17_Chr4g0062331 34.513 113 72 2 352 463 3 114 3.29e-12 65.5
Msa0604740 MtrunA17_Chr7g0236831 40.860 93 53 2 306 397 499 590 1.25e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0604740 AT5G54910.1 51.575 508 172 7 31 471 6 506 1.80e-164 483
Msa0604740 AT5G65900.1 34.873 433 221 13 85 471 174 591 1.15e-58 204
Msa0604740 AT3G18600.1 34.689 418 223 13 85 463 109 515 6.14e-55 193
Msa0604740 AT1G71370.1 31.532 444 242 11 83 478 34 463 1.39e-46 170
Msa0604740 AT5G05450.1 29.773 440 246 11 83 469 34 463 1.62e-40 154
Msa0604740 ATCG00130.1 82.927 82 14 0 138 219 59 140 1.72e-38 139
Msa0604740 AT5G60990.1 32.620 374 189 12 91 415 35 394 2.49e-36 140
Msa0604740 AT5G63120.2 32.591 359 193 11 85 402 185 535 2.68e-35 139
Msa0604740 AT5G63630.1 28.438 429 252 11 73 453 62 483 7.48e-35 137
Msa0604740 AT5G08620.1 27.981 411 240 9 83 446 98 499 1.13e-34 137
Msa0604740 AT5G08610.1 29.126 412 237 10 73 436 390 794 1.69e-34 138
Msa0604740 AT5G63630.2 28.438 429 252 11 73 453 256 677 2.19e-34 137
Msa0604740 AT4G16630.1 32.670 352 188 12 89 402 191 531 2.89e-33 134
Msa0604740 AT1G71280.2 34.375 288 152 11 83 347 35 308 4.44e-32 125
Msa0604740 AT1G71280.1 34.375 288 152 11 83 347 35 308 4.40e-31 125
Msa0604740 AT3G22310.2 30.636 346 191 13 91 398 142 476 6.99e-31 126
Msa0604740 AT3G22310.1 30.636 346 191 13 91 398 142 476 7.58e-31 126
Msa0604740 AT2G07750.1 27.570 428 243 16 73 447 383 796 3.43e-30 125
Msa0604740 AT5G14610.7 30.053 376 202 14 82 412 47 406 7.47e-30 122
Msa0604740 AT5G14610.3 30.053 376 202 14 82 412 47 406 7.47e-30 122
Msa0604740 AT3G58570.1 28.250 400 207 12 84 429 165 538 7.83e-30 123
Msa0604740 AT5G14610.2 30.337 356 195 13 82 397 178 520 8.72e-30 123
Msa0604740 AT5G14610.6 30.337 356 195 13 82 397 178 520 9.27e-30 123
Msa0604740 AT5G14610.5 30.337 356 195 13 82 397 186 528 1.04e-29 123
Msa0604740 AT5G26742.1 29.923 391 208 13 91 431 128 502 1.15e-29 123
Msa0604740 AT5G26742.2 29.923 391 208 13 91 431 128 502 1.15e-29 123
Msa0604740 AT5G14610.1 30.337 356 195 12 82 397 246 588 1.39e-29 123
Msa0604740 AT3G22330.1 27.954 347 199 10 91 398 130 464 8.82e-29 120
Msa0604740 AT5G51280.1 29.830 352 201 12 85 395 166 512 9.77e-29 120
Msa0604740 AT4G33370.1 29.377 337 194 10 89 386 121 452 1.04e-28 119
Msa0604740 AT5G26742.3 29.563 389 208 13 93 431 37 409 1.40e-28 119
Msa0604740 AT1G63250.1 26.636 428 247 16 73 447 336 749 2.62e-28 119
Msa0604740 AT3G09620.2 31.343 335 193 9 91 404 423 741 8.41e-28 117
Msa0604740 AT3G09620.1 31.343 335 193 9 91 404 422 740 9.20e-28 117
Msa0604740 AT1G77030.1 30.172 348 177 14 89 390 52 379 1.13e-26 114
Msa0604740 AT5G63120.1 32.660 297 157 9 85 345 185 474 1.14e-25 110
Msa0604740 AT5G63120.3 32.660 297 157 9 85 345 185 474 1.27e-25 109
Msa0604740 AT5G63120.4 32.660 297 157 9 85 345 185 474 1.27e-25 109
Msa0604740 AT5G63120.5 32.660 297 157 9 85 345 185 474 1.27e-25 109
Msa0604740 AT2G33730.1 28.010 382 197 14 91 409 339 705 6.19e-24 105
Msa0604740 AT5G11170.1 24.317 366 203 12 83 398 64 405 6.21e-23 101
Msa0604740 AT5G11200.1 24.317 366 203 12 83 398 64 405 6.21e-23 101
Msa0604740 AT5G14610.4 30.492 305 160 12 82 346 186 478 1.08e-21 98.2
Msa0604740 AT1G28180.1 28.274 336 183 11 94 386 2 322 1.78e-21 96.3
Msa0604740 AT5G11170.2 24.058 345 188 12 104 398 2 322 3.55e-19 89.0
Msa0604740 AT2G40700.1 36.264 182 86 7 309 461 373 553 4.23e-19 90.9
Msa0604740 AT2G40700.1 29.907 214 123 6 85 277 51 258 1.48e-12 70.5
Msa0604740 AT3G19760.1 24.930 357 189 11 92 398 63 390 7.81e-18 85.9
Msa0604740 AT3G13920.2 26.359 368 200 14 92 408 67 414 3.82e-17 84.0
Msa0604740 AT3G13920.5 26.359 368 200 14 92 408 71 418 3.88e-17 84.0
Msa0604740 AT3G13920.4 26.744 344 191 13 92 394 62 385 4.24e-17 83.6
Msa0604740 AT3G13920.1 26.744 344 191 13 92 394 67 390 4.42e-17 83.6
Msa0604740 AT3G13920.3 26.503 366 207 14 92 415 57 402 6.18e-17 83.2
Msa0604740 AT1G72730.1 25.575 348 198 14 92 398 69 396 7.18e-17 83.2
Msa0604740 AT1G54270.2 25.948 343 195 12 92 394 62 385 1.80e-16 81.6
Msa0604740 AT1G54270.1 25.948 343 195 12 92 394 67 390 2.33e-16 81.3
Msa0604740 AT1G51380.1 24.719 356 198 9 89 398 46 377 5.24e-16 80.1
Msa0604740 AT5G11200.3 34.409 93 58 3 308 398 355 446 3.22e-11 65.9
Msa0604740 AT5G11200.2 34.409 93 58 3 308 398 373 464 3.83e-11 65.5

Find 105 sgRNAs with CRISPR-Local

Find 421 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGCCTGCTGCTGAAGTTC+TGG 0.167616 4_2:+50363559 None:intergenic
CAGTTTGCTTGCATCTTTAC+TGG 0.207661 4_2:-50363590 Msa0604740:CDS
CTTACGAAACTCCTTTGATT+TGG 0.251187 4_2:+50369934 None:intergenic
TTTACGAAACTCCTTTGATT+TGG 0.266186 4_2:+50369973 None:intergenic
CTTTGTGGTCGTGATGTTAT+TGG 0.271360 4_2:-50369611 Msa0604740:CDS
AAATCAACCTCTTGAATTCA+TGG 0.278713 4_2:-50369853 Msa0604740:CDS
CTTACGAAACTCCTTTGATT+TGG 0.302443 4_2:+50369895 None:intergenic
TTACGAAACTCCTTTGATTT+GGG 0.321694 4_2:+50369935 None:intergenic
TTACGAAACTCCTTTGATTT+GGG 0.323867 4_2:+50369974 None:intergenic
CCGTCCGCGAGGCGGCCGAC+GGG 0.335789 4_2:+50369764 None:intergenic
AGCAGTCGACTGGGTTGTTC+AGG 0.336490 4_2:-50364056 Msa0604740:intron
CTACTTTCCTTAAGCGGGCC+CGG 0.340021 4_2:+50368211 None:intergenic
GGGCCTGCTGCTGAAGTTCT+GGG 0.340469 4_2:+50363560 None:intergenic
TGTCAGTCATGGAAACGAAT+TGG 0.363047 4_2:+50369660 None:intergenic
ATTGGGTTTGAACCGGATTC+TGG 0.364889 4_2:+50369815 None:intergenic
GCCGTCCGCGAGGCGGCCGA+CGG 0.364921 4_2:+50369763 None:intergenic
GTCACTCAATGCACGCAAAC+AGG 0.370906 4_2:+50363219 None:intergenic
TCTCTTCCTCATGCGCTTTG+TGG 0.387589 4_2:-50369626 Msa0604740:CDS
TAATTCAATTTATACAACTT+TGG 0.388293 4_2:-50368121 Msa0604740:CDS
GGTGCCGCCAAAACTGGTTC+TGG 0.388561 4_2:-50369590 Msa0604740:CDS
GTATGTGACAAATGCCCTTT+GGG 0.397604 4_2:+50363540 None:intergenic
GGGGAGTTGTTGGGGAGAGG+TGG 0.400484 4_2:+50369785 None:intergenic
GGTTGCAGCAGTTCTTTCCT+TGG 0.405336 4_2:+50363619 None:intergenic
TTGTGCACACTTATATACTC+TGG 0.405378 4_2:+50364770 None:intergenic
GATGCTGAATACTCATCAAT+AGG 0.408686 4_2:+50363463 None:intergenic
ATAGGTAAAATTTGTGTTTG+AGG 0.409992 4_2:-50364230 Msa0604740:intron
CAGTAAAGATGCAAGCAAAC+TGG 0.410867 4_2:+50363591 None:intergenic
CCCGTCGGCCGCCTCGCGGA+CGG 0.411471 4_2:-50369764 Msa0604740:CDS
GTTATTGGTGCCGCCAAAAC+TGG 0.413766 4_2:-50369596 Msa0604740:CDS
AGAAAGCCCGGGCCCGCTTA+AGG 0.414131 4_2:-50368218 Msa0604740:CDS
GGGAGAGGTGGAAGAGACAT+TGG 0.423679 4_2:+50369797 None:intergenic
GTCAGTCATGGAAACGAATT+GGG 0.427399 4_2:+50369661 None:intergenic
GAAATTGTATAGAAAGAGAT+GGG 0.430422 4_2:-50368991 Msa0604740:CDS
AGCATGGTTTGTCTACGCTT+TGG 0.432208 4_2:+50364851 None:intergenic
AAGAGATGGGGACCGGAAGA+TGG 0.434359 4_2:-50368978 Msa0604740:CDS
CCTTCATGGGAGGATGAAAC+AGG 0.435023 4_2:-50364170 Msa0604740:CDS
CGTCCGCGAGGCGGCCGACG+GGG 0.436285 4_2:+50369765 None:intergenic
AGTATGTGACAAATGCCCTT+TGG 0.437338 4_2:+50363539 None:intergenic
ATGCTCCCAACCCCATCTTC+CGG 0.437877 4_2:+50368966 None:intergenic
ACTGCTCGTTATAAATCTCT+TGG 0.443194 4_2:-50363865 Msa0604740:CDS
CGTTTCTACTTTCCTTAAGC+GGG 0.444690 4_2:+50368206 None:intergenic
GGAGAGGTGGAAGAGACATT+GGG 0.445700 4_2:+50369798 None:intergenic
GCGGATCGGTTTCGAGTGAA+TGG 0.446998 4_2:-50368180 Msa0604740:CDS
TTCAAAATTCAGAAGAACTA+CGG 0.449969 4_2:-50368263 Msa0604740:CDS
GGAAGCAGCCGTTGAACAGC+TGG 0.450450 4_2:-50368241 Msa0604740:CDS
ATACCGTTGAAGTGCCTTCA+TGG 0.458252 4_2:-50364184 Msa0604740:CDS
AGGCACTTCAACGGTATGCC+AGG 0.461069 4_2:+50364190 None:intergenic
CCTGTTTCATCCTCCCATGA+AGG 0.461442 4_2:+50364170 None:intergenic
TACTTTCCTTAAGCGGGCCC+GGG 0.461743 4_2:+50368212 None:intergenic
ACCTTCGGAGGAGAATGAAC+TGG 0.467651 4_2:+50363775 None:intergenic
TCTTGCAAGACTAAGTTTGA+AGG 0.469752 4_2:-50364795 Msa0604740:CDS
TTGAACAGCTGGAGAAAGCC+CGG 0.472109 4_2:-50368230 Msa0604740:CDS
AGAGATGGGGACCGGAAGAT+GGG 0.472134 4_2:-50368977 Msa0604740:CDS
TATGTAAGATGCTACATTCT+CGG 0.472178 4_2:+50363903 None:intergenic
AAGAGACATTGGGTTTGAAC+CGG 0.472743 4_2:+50369808 None:intergenic
GCTTCTTGAATCCACTATCA+AGG 0.474881 4_2:+50364900 None:intergenic
GTCCGCGAGGCGGCCGACGG+GGG 0.476939 4_2:+50369766 None:intergenic
AAGGAAAGAACTGCTGCAAC+CGG 0.477476 4_2:-50363617 Msa0604740:CDS
ATGTAAGATGCTACATTCTC+GGG 0.477558 4_2:+50363904 None:intergenic
TGTGCACACTTATATACTCT+GGG 0.491323 4_2:+50364771 None:intergenic
GCTGACCGTATCCTTGATAG+TGG 0.497046 4_2:-50364911 Msa0604740:CDS
CGACTGCTCTATTAAAATCA+AGG 0.502671 4_2:+50364071 None:intergenic
GGCTTTCTCCAGCTGTTCAA+CGG 0.504402 4_2:+50368233 None:intergenic
TCAAAATTCAGAAGAACTAC+GGG 0.510719 4_2:-50368262 Msa0604740:CDS
TCAAGCATCTTAGTTTCTGA+AGG 0.515654 4_2:+50363820 None:intergenic
CTCGGCAACTCAAACAAAGT+CGG 0.517881 4_2:-50364825 Msa0604740:CDS
CCGTTTCTACTTTCCTTAAG+CGG 0.521089 4_2:+50368205 None:intergenic
ATGCTTGAAAAGTTAGAAGC+AGG 0.532659 4_2:-50363805 Msa0604740:CDS
ACTTCAGCAGCAGGCCCAAA+GGG 0.536525 4_2:-50363554 Msa0604740:CDS
AACTTCAGCAGCAGGCCCAA+AGG 0.537316 4_2:-50363555 Msa0604740:CDS
AGAAATTGTATAGAAAGAGA+TGG 0.540882 4_2:-50368992 Msa0604740:CDS
GTACCCAGAACTTCAGCAGC+AGG 0.541536 4_2:-50363563 Msa0604740:CDS
CAGAGCAAATTTACCTTCGG+AGG 0.541890 4_2:+50363763 None:intergenic
TCCAGTTCATTCTCCTCCGA+AGG 0.543164 4_2:-50363776 Msa0604740:intron
TACCGTTGAAGTGCCTTCAT+GGG 0.551865 4_2:-50364183 Msa0604740:CDS
TGAATCCACTATCAAGGATA+CGG 0.553019 4_2:+50364906 None:intergenic
TGAAAAGTTAGAAGCAGGAA+AGG 0.557157 4_2:-50363800 Msa0604740:CDS
ATTGAATCCATGAATTCAAG+AGG 0.559943 4_2:+50369846 None:intergenic
GTATAGAAAGAGATGGGGAC+CGG 0.560985 4_2:-50368985 Msa0604740:CDS
AATGAGAAAACCCAAATCAA+AGG 0.569259 4_2:-50369984 Msa0604740:CDS
GCTACTGATGTGGCTGCAAG+AGG 0.569888 4_2:-50364094 Msa0604740:CDS
AAGTAGAAACGGAAGCGGAT+CGG 0.570689 4_2:-50368194 Msa0604740:CDS
ACTGAGAAAATCCAAATCAA+AGG 0.571553 4_2:-50369906 Msa0604740:CDS
AGCTCGTTGAATGTCAGTCA+TGG 0.572039 4_2:+50369649 None:intergenic
CCGCTTAAGGAAAGTAGAAA+CGG 0.573518 4_2:-50368205 Msa0604740:CDS
TGAACAGCTGGAGAAAGCCC+GGG 0.575165 4_2:-50368229 Msa0604740:CDS
AGAACGTGCCGTCCGCGAGG+CGG 0.576993 4_2:+50369756 None:intergenic
GAGATTTATAACGAGCAGTA+CGG 0.581481 4_2:+50363869 None:intergenic
TGAGCAATTCTCACAGAACT+CGG 0.588652 4_2:+50364126 None:intergenic
AGTTCTCTTCGCTACTGATG+TGG 0.591036 4_2:-50364104 Msa0604740:CDS
CTCCCATGAAGGCACTTCAA+CGG 0.596618 4_2:+50364181 None:intergenic
GAGATGGGGACCGGAAGATG+GGG 0.598307 4_2:-50368976 Msa0604740:intron
ACTGAGAAAACCCAAATCAA+AGG 0.599649 4_2:-50369945 Msa0604740:CDS
CGTTGAAGTGCCTTCATGGG+AGG 0.607619 4_2:-50364180 Msa0604740:CDS
GCATCTTACATACATCGAGT+TGG 0.610817 4_2:-50363892 Msa0604740:CDS
TTGAGTTGCCGAGAAAAGCA+TGG 0.616947 4_2:+50364835 None:intergenic
GGCACTTCAACGGTATGCCA+GGG 0.619201 4_2:+50364191 None:intergenic
AAGGAAAGTAGAAACGGAAG+CGG 0.622485 4_2:-50368199 Msa0604740:CDS
TCACGACCACAAAGCGCATG+AGG 0.624848 4_2:+50369620 None:intergenic
TCACTCAATGCACGCAAACA+GGG 0.625632 4_2:+50363220 None:intergenic
ACCATTTGCTTCAAAAGAGT+AGG 0.633701 4_2:+50364728 None:intergenic
GATGCAAGCAAACTGGACAC+CGG 0.674621 4_2:+50363598 None:intergenic
AAATTGTATAGAAAGAGATG+GGG 0.693687 4_2:-50368990 Msa0604740:CDS
GAGAGAACGTGCCGTCCGCG+AGG 0.704050 4_2:+50369753 None:intergenic
GCATTTAAGAAACTTCACCC+TGG 0.711364 4_2:-50364208 Msa0604740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTAATAAGAATTCTT+TGG - chr4_2:50364613-50364632 Msa0604740:intron 10.0%
!!! TTTTAAATGAAAGAAAAAAA+AGG + chr4_2:50367057-50367076 None:intergenic 10.0%
!!! ATTTTAATGAATTTGAAATG+CGG - chr4_2:50364574-50364593 Msa0604740:intron 15.0%
!! ATTCTTATTAATTTATACGT+AGG + chr4_2:50364609-50364628 None:intergenic 15.0%
!! CAATACAAGATTAAAATATT+TGG + chr4_2:50364695-50364714 None:intergenic 15.0%
!!! CAAATATTTTAATCTTGTAT+TGG - chr4_2:50364693-50364712 Msa0604740:intron 15.0%
!! TAATTCAATTTATACAACTT+TGG - chr4_2:50365082-50365101 Msa0604740:intron 15.0%
!! AATTCAATACACAAATTAAT+AGG + chr4_2:50365336-50365355 None:intergenic 15.0%
!! TAAATAAATCAATCAAATTC+CGG + chr4_2:50365569-50365588 None:intergenic 15.0%
!!! AAAGAATTTTTGGATATAAT+AGG + chr4_2:50365804-50365823 None:intergenic 15.0%
!! AAGAAAAAATCCTATATTTA+TGG + chr4_2:50365888-50365907 None:intergenic 15.0%
!!! GATTATTTTTTTAGAATACA+AGG + chr4_2:50366239-50366258 None:intergenic 15.0%
!!! TTTTCTTAAGAATGAAATAA+AGG + chr4_2:50366261-50366280 None:intergenic 15.0%
!! CATTTACTACAAAAAAAAAA+TGG + chr4_2:50366486-50366505 None:intergenic 15.0%
!!! CATTTTTTTTTTGTAGTAAA+TGG - chr4_2:50366484-50366503 Msa0604740:intron 15.0%
!!! TTTTCAAAATTTTCATAGAA+GGG + chr4_2:50366616-50366635 None:intergenic 15.0%
!!! TTTTTCAAAATTTTCATAGA+AGG + chr4_2:50366617-50366636 None:intergenic 15.0%
!!! GAAAATTTTGAAAAAAGAAT+AGG - chr4_2:50366622-50366641 Msa0604740:intron 15.0%
!! TTAAAATGGAATCTATTAAT+TGG + chr4_2:50366871-50366890 None:intergenic 15.0%
!!! ATTAATAGATTCCATTTTAA+CGG - chr4_2:50366871-50366890 Msa0604740:intron 15.0%
!! TGTTAAAAAAAATAGAAAAC+TGG + chr4_2:50367024-50367043 None:intergenic 15.0%
!!! TTTCCTTATTGTTTTTAAAA+CGG - chr4_2:50367123-50367142 Msa0604740:intron 15.0%
!!! AATAATCTTTGTTTACTATT+TGG - chr4_2:50367392-50367411 Msa0604740:intron 15.0%
!! ATAAATTCCTTAAGATTATA+GGG + chr4_2:50367956-50367975 None:intergenic 15.0%
!!! AGGTTTTTTTTTTTTTTTGA+AGG - chr4_2:50368162-50368181 Msa0604740:CDS 15.0%
!!! NNNNNNNNNNACGAATTTTG+GGG + chr4_2:50369784-50369803 None:intergenic 15.0%
!!! ATCAAAACATGTTTATTTTT+CGG + chr4_2:50369913-50369932 None:intergenic 15.0%
!!! TTTTTGATATTCTTCGATAT+CGG + chr4_2:50363508-50363527 None:intergenic 20.0%
!!! TTGTTTTGATTAGTGTATTT+GGG - chr4_2:50363668-50363687 Msa0604740:intron 20.0%
!! TGAAAAAAGCTTATGAAAAA+TGG + chr4_2:50363846-50363865 None:intergenic 20.0%
!!! ATTTTTTTTATGTGAATGAC+AGG - chr4_2:50364182-50364201 Msa0604740:CDS 20.0%
!!! AAAAAGTTAAAGTATCTACT+CGG - chr4_2:50364326-50364345 Msa0604740:intron 20.0%
!! TACAAGATTAAAATATTTGG+AGG + chr4_2:50364692-50364711 None:intergenic 20.0%
!! ACAAATTAATAGGTTCTATT+AGG + chr4_2:50365326-50365345 None:intergenic 20.0%
!! AAATAAATCAATCAAATTCC+GGG + chr4_2:50365568-50365587 None:intergenic 20.0%
!!! ATTTTGAAAAGAACCAAAAT+TGG - chr4_2:50365631-50365650 Msa0604740:intron 20.0%
!!! TTTTGAAAAGAACCAAAATT+GGG - chr4_2:50365632-50365651 Msa0604740:intron 20.0%
!! TGATCTATATCCATAAATAT+AGG - chr4_2:50365875-50365894 Msa0604740:intron 20.0%
!! ATTTATATCCATTACTAACT+TGG - chr4_2:50366321-50366340 Msa0604740:intron 20.0%
!! TAGAAAAATCTGTGAATATT+AGG + chr4_2:50366421-50366440 None:intergenic 20.0%
!!! TTTCAAAATTTTCATAGAAG+GGG + chr4_2:50366615-50366634 None:intergenic 20.0%
!!! TTAATAGATTCCATTTTAAC+GGG - chr4_2:50366872-50366891 Msa0604740:intron 20.0%
!! TAAGAATAATTCAAAGATTG+AGG + chr4_2:50366912-50366931 None:intergenic 20.0%
!!! TTCTTAAAAGTATTCTAGTT+AGG + chr4_2:50366997-50367016 None:intergenic 20.0%
!!! TTCCTTATTGTTTTTAAAAC+GGG - chr4_2:50367124-50367143 Msa0604740:intron 20.0%
!! ATCTTTGAACAATCAAAATT+GGG + chr4_2:50367363-50367382 None:intergenic 20.0%
!!! ATTTCTTTTAAGTATGTGTT+TGG - chr4_2:50367469-50367488 Msa0604740:intron 20.0%
!! ACAAAATTTGACGATTATTA+AGG + chr4_2:50367641-50367660 None:intergenic 20.0%
!!! ACTATTTGATTTAGTAATTG+TGG - chr4_2:50367709-50367728 Msa0604740:intron 20.0%
!!! TTTAACCTATTTAGAGTTAT+AGG - chr4_2:50367882-50367901 Msa0604740:intron 20.0%
!! TCTCAAATAAAACAAGTTTA+TGG - chr4_2:50367909-50367928 Msa0604740:intron 20.0%
!! CATAAATTCCTTAAGATTAT+AGG + chr4_2:50367957-50367976 None:intergenic 20.0%
!! CTATAATCTTAAGGAATTTA+TGG - chr4_2:50367955-50367974 Msa0604740:intron 20.0%
!! GTTAAGAAGTTTATTGAAAA+TGG - chr4_2:50368113-50368132 Msa0604740:CDS 20.0%
!! AAAAAAAAACCTACTTACTT+TGG + chr4_2:50368154-50368173 None:intergenic 20.0%
!!! GATCACATATATTTATCTTT+TGG - chr4_2:50368221-50368240 Msa0604740:CDS 20.0%
!! AAAAAAAATCTCCTTGATAA+AGG + chr4_2:50368619-50368638 None:intergenic 20.0%
!!! GAGATTTTTTTTTACTTGAT+TGG - chr4_2:50368627-50368646 Msa0604740:intron 20.0%
!!! NNNNNNNNNACGAATTTTGG+GGG + chr4_2:50369783-50369802 None:intergenic 20.0%
! GATATCGAAGAATATCAAAA+AGG - chr4_2:50363507-50363526 Msa0604740:CDS 25.0%
!!! GTTGTTTTGATTAGTGTATT+TGG - chr4_2:50363667-50363686 Msa0604740:intron 25.0%
!!! TAATTTTAAGGACTACGTAT+TGG + chr4_2:50364054-50364073 None:intergenic 25.0%
! AGAAATTGTATAGAAAGAGA+TGG - chr4_2:50364211-50364230 Msa0604740:CDS 25.0%
! GAAATTGTATAGAAAGAGAT+GGG - chr4_2:50364212-50364231 Msa0604740:CDS 25.0%
! AAATTGTATAGAAAGAGATG+GGG - chr4_2:50364213-50364232 Msa0604740:CDS 25.0%
! TTTGCTGACAATTATTTGTT+TGG - chr4_2:50364656-50364675 Msa0604740:intron 25.0%
! TGTTTAGAAATAGAGAAAAG+AGG - chr4_2:50364731-50364750 Msa0604740:CDS 25.0%
! CTCATTCGATAATAAAGATA+GGG - chr4_2:50364759-50364778 Msa0604740:CDS 25.0%
! CATGAATCTTTCAATTCATT+TGG + chr4_2:50364815-50364834 None:intergenic 25.0%
! TGAATTGAAAGATTCATGTT+TGG - chr4_2:50364817-50364836 Msa0604740:CDS 25.0%
! TTCAAAATTCAGAAGAACTA+CGG - chr4_2:50364940-50364959 Msa0604740:intron 25.0%
!! GATTCATTTTGAACAACAAA+GGG - chr4_2:50365133-50365152 Msa0604740:intron 25.0%
! GTATTGAATTACAAATTGAG+AGG - chr4_2:50365346-50365365 Msa0604740:intron 25.0%
! AGTATTCATTCTTATGTGAA+TGG - chr4_2:50365462-50365481 Msa0604740:intron 25.0%
! GCATATAAGATGACTAAAAA+AGG + chr4_2:50365594-50365613 None:intergenic 25.0%
! TTTGAAAAGAACCAAAATTG+GGG - chr4_2:50365633-50365652 Msa0604740:intron 25.0%
! GGAATAAGCAATTTCTTATT+CGG - chr4_2:50365654-50365673 Msa0604740:intron 25.0%
!!! AGAAAGTATTTCAATTGGAT+GGG + chr4_2:50365711-50365730 None:intergenic 25.0%
!!! TAGAAAGTATTTCAATTGGA+TGG + chr4_2:50365712-50365731 None:intergenic 25.0%
!!! TGGATAGAAAGTATTTCAAT+TGG + chr4_2:50365716-50365735 None:intergenic 25.0%
! TCTAGATATGGAAAAAAATC+TGG + chr4_2:50365736-50365755 None:intergenic 25.0%
! AGAATATGATACTCTAGATA+TGG + chr4_2:50365748-50365767 None:intergenic 25.0%
!! CTTCTAGATCTAGATAATTT+TGG - chr4_2:50365766-50365785 Msa0604740:intron 25.0%
!! TCCAAAAATTCTTTTCTACA+TGG - chr4_2:50365810-50365829 Msa0604740:intron 25.0%
!! CCAAAAATTCTTTTCTACAT+GGG - chr4_2:50365811-50365830 Msa0604740:intron 25.0%
! TGTAATTATAAGAAATCGCT+TGG - chr4_2:50365835-50365854 Msa0604740:intron 25.0%
!! CTATCAATATCTTCATTTTG+CGG + chr4_2:50365913-50365932 None:intergenic 25.0%
! TAATGAATCAATGGACAAAT+TGG + chr4_2:50366172-50366191 None:intergenic 25.0%
! TTAAGAAAAAAAGATCTTCC+AGG - chr4_2:50366272-50366291 Msa0604740:intron 25.0%
! TATGAATTCACAGAATTCTT+GGG + chr4_2:50366396-50366415 None:intergenic 25.0%
! ATATGAATTCACAGAATTCT+TGG + chr4_2:50366397-50366416 None:intergenic 25.0%
!! GATTTTTCTATAATCGACAT+TGG - chr4_2:50366431-50366450 Msa0604740:intron 25.0%
! ATGACAGAAGAAAAAAAAGA+GGG + chr4_2:50366770-50366789 None:intergenic 25.0%
! AATGACAGAAGAAAAAAAAG+AGG + chr4_2:50366771-50366790 None:intergenic 25.0%
! ATTCTTCATTCACAGAAAAA+AGG + chr4_2:50366844-50366863 None:intergenic 25.0%
! CATCTTTGAACAATCAAAAT+TGG + chr4_2:50367364-50367383 None:intergenic 25.0%
!! CTTTGTTTACTATTTGGAAA+TGG - chr4_2:50367398-50367417 Msa0604740:intron 25.0%
!! TTAATTCATTTTCTCAAACC+TGG - chr4_2:50367439-50367458 Msa0604740:intron 25.0%
! TTAAAAGAAATTTGTAAGCC+AGG + chr4_2:50367460-50367479 None:intergenic 25.0%
! ATATTGTTTCAGTTTGTATG+CGG - chr4_2:50367812-50367831 Msa0604740:intron 25.0%
! AATCTCCTATAACTCTAAAT+AGG + chr4_2:50367890-50367909 None:intergenic 25.0%
!! TTTTATCTTCCAAAGTAAGT+AGG - chr4_2:50368142-50368161 Msa0604740:CDS 25.0%
!!! TTTTTGAAGGAAAAGTAAGT+AGG - chr4_2:50368175-50368194 Msa0604740:CDS 25.0%
! ATCAAAAGTTAGATATGCTA+TGG - chr4_2:50368515-50368534 Msa0604740:intron 25.0%
!! GTGTTCTTAATTTTTCGTTT+TGG + chr4_2:50368701-50368720 None:intergenic 25.0%
! GAAATTATTTCCATCTGAAA+AGG - chr4_2:50368862-50368881 Msa0604740:intron 25.0%
! GATGTGAATGTTTAATGTTA+TGG + chr4_2:50368945-50368964 None:intergenic 25.0%
!! CAAATTTTACCTATTAAGCA+GGG + chr4_2:50368967-50368986 None:intergenic 25.0%
!! ACAAATTTTACCTATTAAGC+AGG + chr4_2:50368968-50368987 None:intergenic 25.0%
! ATAGGTAAAATTTGTGTTTG+AGG - chr4_2:50368973-50368992 Msa0604740:intron 25.0%
!!! TGTCATTTTCTTATATGACT+TGG - chr4_2:50369495-50369514 Msa0604740:intron 25.0%
! GGCTGAATAATCAATAAATA+AGG + chr4_2:50369566-50369585 None:intergenic 25.0%
!! ATTTATTGATTATTCAGCCA+AGG - chr4_2:50369567-50369586 Msa0604740:CDS 25.0%
!! CAAAGATCTCTTTATCTTTT+TGG + chr4_2:50369706-50369725 None:intergenic 25.0%
!!! AATTTTTTCAGCTTGAGATA+TGG - chr4_2:50369949-50369968 Msa0604740:CDS 25.0%
! TTACGAAACTCCTTTGATTT+GGG + chr4_2:50363232-50363251 None:intergenic 30.0%
TTTACGAAACTCCTTTGATT+TGG + chr4_2:50363233-50363252 None:intergenic 30.0%
! TTACGAAACTCCTTTGATTT+GGG + chr4_2:50363232-50363251 None:intergenic 30.0%
ACTGAGAAAATCCAAATCAA+AGG - chr4_2:50363297-50363316 Msa0604740:intron 30.0%
AAATCAACCTCTTGAATTCA+TGG - chr4_2:50363350-50363369 Msa0604740:intron 30.0%
ATTGAATCCATGAATTCAAG+AGG + chr4_2:50363360-50363379 None:intergenic 30.0%
! TTGATTAGTGTATTTGGGTT+AGG - chr4_2:50363673-50363692 Msa0604740:intron 30.0%
! TGATTAGTGTATTTGGGTTA+GGG - chr4_2:50363674-50363693 Msa0604740:intron 30.0%
!!! GGGTTTTAGTTGTTTGATTT+TGG - chr4_2:50363702-50363721 Msa0604740:intron 30.0%
!! ATATTTGCTATAAGCTGTCT+TGG + chr4_2:50363888-50363907 None:intergenic 30.0%
AGTGATACTTAGTTACTGTT+TGG + chr4_2:50364029-50364048 None:intergenic 30.0%
CATAATCATATCACCTACAT+GGG - chr4_2:50364257-50364276 Msa0604740:intron 30.0%
ACTATGGTAGAATATTCATG+TGG + chr4_2:50364529-50364548 None:intergenic 30.0%
CATGAATATTCTACCATAGT+AGG - chr4_2:50364529-50364548 Msa0604740:intron 30.0%
TGATTCTTGAATACCTACTA+TGG + chr4_2:50364545-50364564 None:intergenic 30.0%
AGAAATAGAGAAAAGAGGAT+AGG - chr4_2:50364736-50364755 Msa0604740:CDS 30.0%
GCTCATTCGATAATAAAGAT+AGG - chr4_2:50364758-50364777 Msa0604740:CDS 30.0%
AGATAGGGAAATTTCCTATA+CGG - chr4_2:50364774-50364793 Msa0604740:CDS 30.0%
TGAAAGATTCATGTTTGGTT+CGG - chr4_2:50364822-50364841 Msa0604740:CDS 30.0%
TCAAAATTCAGAAGAACTAC+GGG - chr4_2:50364941-50364960 Msa0604740:intron 30.0%
! CAATTTTTCTCGTTCTATCT+CGG + chr4_2:50365054-50365073 None:intergenic 30.0%
! CGATTCATTTTGAACAACAA+AGG - chr4_2:50365132-50365151 Msa0604740:intron 30.0%
! GTTTTACAACAAGCATTACA+AGG - chr4_2:50365179-50365198 Msa0604740:intron 30.0%
ACACTAAACAACATTCAAGA+TGG - chr4_2:50365390-50365409 Msa0604740:intron 30.0%
! CTATGATTTGCATTTCTAAC+AGG + chr4_2:50365444-50365463 None:intergenic 30.0%
AGATACTCTTTCTCGAAATA+TGG - chr4_2:50365499-50365518 Msa0604740:intron 30.0%
TTTCTCGAAATATGGACAAA+TGG - chr4_2:50365507-50365526 Msa0604740:intron 30.0%
! AATTGCTTATTCCCCAATTT+TGG + chr4_2:50365647-50365666 None:intergenic 30.0%
! CCCATGTAGAAAAGAATTTT+TGG + chr4_2:50365814-50365833 None:intergenic 30.0%
CGCAAAATGAAGATATTGAT+AGG - chr4_2:50365911-50365930 Msa0604740:intron 30.0%
!!! TCCTTCTTGTTCTTGTTTTT+TGG - chr4_2:50365995-50366014 Msa0604740:intron 30.0%
TCCAAAAAACAAGAACAAGA+AGG + chr4_2:50365999-50366018 None:intergenic 30.0%
!! CCATTGATTCATTAACGAAT+CGG - chr4_2:50366178-50366197 Msa0604740:intron 30.0%
!! CATTGATTCATTAACGAATC+GGG - chr4_2:50366179-50366198 Msa0604740:intron 30.0%
ACGTTTCGTATGTCTTAATT+TGG - chr4_2:50366202-50366221 Msa0604740:intron 30.0%
!!! AGATCTATTTTTGAATCTCC+TGG + chr4_2:50366293-50366312 None:intergenic 30.0%
TCACAAATCCAAGTTAGTAA+TGG + chr4_2:50366332-50366351 None:intergenic 30.0%
TATGTATCAGTAGTATTGCT+AGG + chr4_2:50366574-50366593 None:intergenic 30.0%
TGACAGAAGAAAAAAAAGAG+GGG + chr4_2:50366769-50366788 None:intergenic 30.0%
!!! GTCCCGTTTTAAAAACAATA+AGG + chr4_2:50367129-50367148 None:intergenic 30.0%
TGTCAACAAGCTAAATGTAT+TGG - chr4_2:50367296-50367315 Msa0604740:intron 30.0%
!! TTTTGATTGTTCAAAGATGC+AGG - chr4_2:50367365-50367384 Msa0604740:intron 30.0%
ACTTAGCTTCACAAATTTCA+TGG + chr4_2:50367538-50367557 None:intergenic 30.0%
!!! AGGAAAAACGTTCGTTTTTT+TGG - chr4_2:50367569-50367588 Msa0604740:intron 30.0%
AATTTGACGATTATTAAGGC+CGG + chr4_2:50367637-50367656 None:intergenic 30.0%
TAAATCAAATAGTAAGCTGC+TGG + chr4_2:50367702-50367721 None:intergenic 30.0%
!!! TTTTGTAACCTTGCTATTCA+TGG - chr4_2:50367843-50367862 Msa0604740:intron 30.0%
TTTATGGTCCTTCCTTTAAA+AGG - chr4_2:50367925-50367944 Msa0604740:intron 30.0%
! TATAGGGACTTTCCTTTTAA+AGG + chr4_2:50367940-50367959 None:intergenic 30.0%
TTTGGCAAAATAACTGATAG+TGG - chr4_2:50368239-50368258 Msa0604740:CDS 30.0%
!! AAAATAACTGATAGTGGACT+TGG - chr4_2:50368245-50368264 Msa0604740:CDS 30.0%
! ATATCTAACTTTTGATCCAG+GGG + chr4_2:50368511-50368530 None:intergenic 30.0%
! CATATCTAACTTTTGATCCA+GGG + chr4_2:50368512-50368531 None:intergenic 30.0%
TTAAGAACACAATCAATCAG+AGG - chr4_2:50368711-50368730 Msa0604740:intron 30.0%
CTGATTGTGGTTATTGTAAT+TGG - chr4_2:50368781-50368800 Msa0604740:intron 30.0%
TTGTGGTTATTGTAATTGGA+AGG - chr4_2:50368785-50368804 Msa0604740:intron 30.0%
! TGTAATTGGAAGGCTTTTAA+AGG - chr4_2:50368795-50368814 Msa0604740:intron 30.0%
AAATTAGCACCAAAAACACA+CGG + chr4_2:50368899-50368918 None:intergenic 30.0%
! AAGATAGTTGAACTCTAAAG+TGG + chr4_2:50368922-50368941 None:intergenic 30.0%
GATGAAACAGGAAAAAAGAA+TGG - chr4_2:50369045-50369064 Msa0604740:intron 30.0%
! AATGTGACACTGTGTTATTA+TGG - chr4_2:50369234-50369253 Msa0604740:intron 30.0%
CATAAATGTAAGAGAAAGGT+TGG + chr4_2:50369267-50369286 None:intergenic 30.0%
CCTACATAAATGTAAGAGAA+AGG + chr4_2:50369271-50369290 None:intergenic 30.0%
CCTTTCTCTTACATTTATGT+AGG - chr4_2:50369268-50369287 Msa0604740:intron 30.0%
TATGTAAGATGCTACATTCT+CGG + chr4_2:50369303-50369322 None:intergenic 30.0%
! AGATCTCTTTATCTTTTTGG+AGG + chr4_2:50369703-50369722 None:intergenic 30.0%
ACTGAGAAAACCCAAATCAA+AGG - chr4_2:50363258-50363277 Msa0604740:intron 35.0%
CTTACGAAACTCCTTTGATT+TGG + chr4_2:50363272-50363291 None:intergenic 35.0%
CTTACGAAACTCCTTTGATT+TGG + chr4_2:50363272-50363291 None:intergenic 35.0%
CAATCTCAAAAACCAGAATC+CGG - chr4_2:50363376-50363395 Msa0604740:intron 35.0%
ATATCGGTAACTGTTCAAAC+CGG + chr4_2:50363492-50363511 None:intergenic 35.0%
! TGTTTTTCCAGAACCAGTTT+TGG + chr4_2:50363623-50363642 None:intergenic 35.0%
CTAATCAAAACAACACTCAC+AGG + chr4_2:50363661-50363680 None:intergenic 35.0%
! GATTAGTGTATTTGGGTTAG+GGG - chr4_2:50363675-50363694 Msa0604740:intron 35.0%
TTTATGTGAATGACAGGTGT+TGG - chr4_2:50364188-50364207 Msa0604740:CDS 35.0%
GCATAATCATATCACCTACA+TGG - chr4_2:50364256-50364275 Msa0604740:intron 35.0%
! AATGGAAGTGTGTTGAATCA+AGG - chr4_2:50364356-50364375 Msa0604740:intron 35.0%
! ATGGAAGTGTGTTGAATCAA+GGG - chr4_2:50364357-50364376 Msa0604740:intron 35.0%
GACAGTAAGCGTCTTTATTA+TGG - chr4_2:50364382-50364401 Msa0604740:intron 35.0%
AAAGGTCAAGCAGATACAAT+AGG - chr4_2:50364430-50364449 Msa0604740:intron 35.0%
! AATTTTGCTCGGAGAAATAG+AGG - chr4_2:50364468-50364487 Msa0604740:intron 35.0%
! ATTTTGCTCGGAGAAATAGA+GGG - chr4_2:50364469-50364488 Msa0604740:intron 35.0%
! GAAAGATTCATGTTTGGTTC+GGG - chr4_2:50364823-50364842 Msa0604740:CDS 35.0%
GATTAATCAAGTGCAACAGA+GGG - chr4_2:50365157-50365176 Msa0604740:intron 35.0%
! AGACATCATTTTACCACCTT+CGG - chr4_2:50365266-50365285 Msa0604740:intron 35.0%
! GCTTCATAAAGTGCTTCTTT+AGG + chr4_2:50365543-50365562 None:intergenic 35.0%
TAAATCAATCAAATTCCGGG+AGG + chr4_2:50365565-50365584 None:intergenic 35.0%
GGATGGGAATGAATGTAAAA+AGG + chr4_2:50365695-50365714 None:intergenic 35.0%
TAGAATCAATGAACATCGTG+TGG + chr4_2:50366078-50366097 None:intergenic 35.0%
GATTAGTATCACAAAACTGG+AGG + chr4_2:50366103-50366122 None:intergenic 35.0%
CGAGATTAGTATCACAAAAC+TGG + chr4_2:50366106-50366125 None:intergenic 35.0%
ATGATTTACCTGAGAACAGA+TGG + chr4_2:50366130-50366149 None:intergenic 35.0%
! CCGATTCGTTAATGAATCAA+TGG + chr4_2:50366181-50366200 None:intergenic 35.0%
AATCAAGAAAACGTTGTCGA+TGG - chr4_2:50366546-50366565 Msa0604740:intron 35.0%
TTCAAAGATTGAGGTGATTG+AGG + chr4_2:50366903-50366922 None:intergenic 35.0%
AAAAATGAAAGTGGGTCTCT+TGG - chr4_2:50367151-50367170 Msa0604740:intron 35.0%
AAAATGAAAGTGGGTCTCTT+GGG - chr4_2:50367152-50367171 Msa0604740:intron 35.0%
GTAGAATCATACCTTGATGA+GGG + chr4_2:50367181-50367200 None:intergenic 35.0%
AGTAGAATCATACCTTGATG+AGG + chr4_2:50367182-50367201 None:intergenic 35.0%
TTTCATCCATGTGTTGTAGA+AGG + chr4_2:50367338-50367357 None:intergenic 35.0%
TTTCATGGTGAATGCTTCTT+GGG + chr4_2:50367523-50367542 None:intergenic 35.0%
ATTTCATGGTGAATGCTTCT+TGG + chr4_2:50367524-50367543 None:intergenic 35.0%
!! AAGCTAAGTTTTGTAGCTTC+AGG - chr4_2:50367549-50367568 Msa0604740:intron 35.0%
AGTTTGTGTTAGCATGTGTT+TGG + chr4_2:50367610-50367629 None:intergenic 35.0%
ATGCTAACACAAACTCTTAC+CGG - chr4_2:50367615-50367634 Msa0604740:intron 35.0%
GTTGATGCATAGTATAGATG+TGG - chr4_2:50367731-50367750 Msa0604740:intron 35.0%
CATGAATAGCAAGGTTACAA+AGG + chr4_2:50367780-50367799 None:intergenic 35.0%
GGTTAAAAGCTAACCCAAAT+GGG + chr4_2:50367869-50367888 None:intergenic 35.0%
AGGTTAAAAGCTAACCCAAA+TGG + chr4_2:50367870-50367889 None:intergenic 35.0%
GGAAAGTCCCTATAATCTTA+AGG - chr4_2:50367946-50367965 Msa0604740:intron 35.0%
CATCTTACACAAGAAACTAC+TGG - chr4_2:50368010-50368029 Msa0604740:intron 35.0%
!! ATAGGTTTTGGTACTAGATG+AGG - chr4_2:50368270-50368289 Msa0604740:CDS 35.0%
TGAATCCACTATCAAGGATA+CGG + chr4_2:50368300-50368319 None:intergenic 35.0%
! TAGACAAACCATGCTTTTCT+CGG - chr4_2:50368360-50368379 Msa0604740:intron 35.0%
TCTTGCAAGACTAAGTTTGA+AGG - chr4_2:50368408-50368427 Msa0604740:intron 35.0%
TGTGCACACTTATATACTCT+GGG + chr4_2:50368435-50368454 None:intergenic 35.0%
TTGTGCACACTTATATACTC+TGG + chr4_2:50368436-50368455 None:intergenic 35.0%
!!! TCCTACTCTTTTGAAGCAAA+TGG - chr4_2:50368474-50368493 Msa0604740:intron 35.0%
ACCATTTGCTTCAAAAGAGT+AGG + chr4_2:50368478-50368497 None:intergenic 35.0%
! GCATATCTAACTTTTGATCC+AGG + chr4_2:50368513-50368532 None:intergenic 35.0%
CTTTCTATCAAGCTGTAAAC+AGG - chr4_2:50368576-50368595 Msa0604740:intron 35.0%
TACAATAACCACAATCAGCA+CGG + chr4_2:50368779-50368798 None:intergenic 35.0%
!! AAGGCTTTTAAAGGATTTGC+AGG - chr4_2:50368804-50368823 Msa0604740:intron 35.0%
CGACTGCTCTATTAAAATCA+AGG + chr4_2:50369135-50369154 None:intergenic 35.0%
!! ATTTTAATAGAGCAGTCGAC+TGG - chr4_2:50369137-50369156 Msa0604740:intron 35.0%
! TTTTAATAGAGCAGTCGACT+GGG - chr4_2:50369138-50369157 Msa0604740:intron 35.0%
! TTTGCTTCTGTTTCTTGTCT+TGG - chr4_2:50369177-50369196 Msa0604740:intron 35.0%
TTGTCTTGGTGAAAGTCTTA+AGG - chr4_2:50369191-50369210 Msa0604740:intron 35.0%
GTGAAAGTCTTAAGGATTTG+AGG - chr4_2:50369199-50369218 Msa0604740:intron 35.0%
AAAGTCTTAAGGATTTGAGG+TGG - chr4_2:50369202-50369221 Msa0604740:intron 35.0%
! AAGTCTTAAGGATTTGAGGT+GGG - chr4_2:50369203-50369222 Msa0604740:intron 35.0%
ATGTAAGATGCTACATTCTC+GGG + chr4_2:50369302-50369321 None:intergenic 35.0%
GAGATTTATAACGAGCAGTA+CGG + chr4_2:50369337-50369356 None:intergenic 35.0%
ACTGCTCGTTATAAATCTCT+TGG - chr4_2:50369338-50369357 Msa0604740:intron 35.0%
TCAAGCATCTTAGTTTCTGA+AGG + chr4_2:50369386-50369405 None:intergenic 35.0%
ATGCTTGAAAAGTTAGAAGC+AGG - chr4_2:50369398-50369417 Msa0604740:intron 35.0%
TGAAAAGTTAGAAGCAGGAA+AGG - chr4_2:50369403-50369422 Msa0604740:intron 35.0%
TTGCAGAGCAAATTTACCTT+CGG + chr4_2:50369446-50369465 None:intergenic 35.0%
! ACATTGAGGTGTCAGATTTA+AGG - chr4_2:50369471-50369490 Msa0604740:intron 35.0%
!! TTTATCTTTTTGGAGGTGGA+TGG + chr4_2:50369696-50369715 None:intergenic 35.0%
!! TCTCTTTATCTTTTTGGAGG+TGG + chr4_2:50369700-50369719 None:intergenic 35.0%
GATGCTGAATACTCATCAAT+AGG + chr4_2:50369743-50369762 None:intergenic 35.0%
GATGAGTATTCAGCATCATT+AGG - chr4_2:50369746-50369765 Msa0604740:intron 35.0%
AAGAGACATTGGGTTTGAAC+CGG + chr4_2:50363398-50363417 None:intergenic 40.0%
TATCGGTAACTGTTCAAACC+GGG + chr4_2:50363491-50363510 None:intergenic 40.0%
GTCAGTCATGGAAACGAATT+GGG + chr4_2:50363545-50363564 None:intergenic 40.0%
TGTCAGTCATGGAAACGAAT+TGG + chr4_2:50363546-50363565 None:intergenic 40.0%
CTTTGTGGTCGTGATGTTAT+TGG - chr4_2:50363592-50363611 Msa0604740:CDS 40.0%
!! TTTTCCAGAACCAGTTTTGG+CGG + chr4_2:50363620-50363639 None:intergenic 40.0%
GATCTCAAACTTGCAAGAGT+CGG + chr4_2:50364139-50364158 None:intergenic 40.0%
TTTGCCGTGTTGAATGCTAT+TGG - chr4_2:50364297-50364316 Msa0604740:intron 40.0%
TTGCCGTGTTGAATGCTATT+GGG - chr4_2:50364298-50364317 Msa0604740:intron 40.0%
ACACCCAATAGCATTCAACA+CGG + chr4_2:50364304-50364323 None:intergenic 40.0%
TATCTACTCGGACACTACAA+TGG - chr4_2:50364338-50364357 Msa0604740:intron 40.0%
! GCTTTATTCTGTCTCCACTT+AGG - chr4_2:50364407-50364426 Msa0604740:intron 40.0%
ATTCTGTCTCCACTTAGGAA+AGG - chr4_2:50364412-50364431 Msa0604740:intron 40.0%
! GCAATGCGAAGAATTTTGCT+CGG - chr4_2:50364457-50364476 Msa0604740:intron 40.0%
TCTCACACTCAATTCCGTAT+AGG + chr4_2:50364791-50364810 None:intergenic 40.0%
CGTTTCTACTTTCCTTAAGC+GGG + chr4_2:50365000-50365019 None:intergenic 40.0%
CCGTTTCTACTTTCCTTAAG+CGG + chr4_2:50365001-50365020 None:intergenic 40.0%
CCGCTTAAGGAAAGTAGAAA+CGG - chr4_2:50364998-50365017 Msa0604740:intron 40.0%
AAGGAAAGTAGAAACGGAAG+CGG - chr4_2:50365004-50365023 Msa0604740:intron 40.0%
CGATTAATCAAGTGCAACAG+AGG - chr4_2:50365156-50365175 Msa0604740:intron 40.0%
TCTTGAGCAGTTACATATCC+AGG + chr4_2:50365249-50365268 None:intergenic 40.0%
TTATCAACGATTTCCACCGA+AGG + chr4_2:50365285-50365304 None:intergenic 40.0%
TTACAAATTGAGAGGAAGCG+TGG - chr4_2:50365354-50365373 Msa0604740:intron 40.0%
!! GCTTGGTTTTTGTTTCCTTG+CGG - chr4_2:50365852-50365871 Msa0604740:intron 40.0%
TATGGATATAGATCACCGCA+AGG + chr4_2:50365870-50365889 None:intergenic 40.0%
TGAGGAATCACCCGTTAAAA+TGG + chr4_2:50366885-50366904 None:intergenic 40.0%
!! AAACCAGATCGTTTTAGTGC+TGG - chr4_2:50367222-50367241 Msa0604740:intron 40.0%
GTTGACACATTCTTTCTCTG+TGG + chr4_2:50367283-50367302 None:intergenic 40.0%
GATGTGGCTAGATTTGTATG+TGG - chr4_2:50367747-50367766 Msa0604740:intron 40.0%
CAAAGTGTGCATGAATAGCA+AGG + chr4_2:50367789-50367808 None:intergenic 40.0%
! TTGCTATTCATGGCCCATTT+GGG - chr4_2:50367853-50367872 Msa0604740:intron 40.0%
!! GGGACTTTCCTTTTAAAGGA+AGG + chr4_2:50367936-50367955 None:intergenic 40.0%
!! CTGATAGTGGACTTGGTTAT+AGG - chr4_2:50368252-50368271 Msa0604740:CDS 40.0%
!! GTGGACTTGGTTATAGGTTT+TGG - chr4_2:50368258-50368277 Msa0604740:CDS 40.0%
GCTTCTTGAATCCACTATCA+AGG + chr4_2:50368306-50368325 None:intergenic 40.0%
!!! CTCTTTTGAAGCAAATGGTG+AGG - chr4_2:50368479-50368498 Msa0604740:intron 40.0%
CTTGATAAAGGACAGAGAAG+TGG + chr4_2:50368607-50368626 None:intergenic 40.0%
CACTTCTCTGTCCTTTATCA+AGG - chr4_2:50368605-50368624 Msa0604740:intron 40.0%
! GAACACGAAACCTTTTCAGA+TGG + chr4_2:50368875-50368894 None:intergenic 40.0%
CATTCACATCCCTGCTTAAT+AGG - chr4_2:50368955-50368974 Msa0604740:intron 40.0%
GCATTTAAGAAACTTCACCC+TGG - chr4_2:50368995-50369014 Msa0604740:CDS 40.0%
TGAGCAATTCTCACAGAACT+CGG + chr4_2:50369080-50369099 None:intergenic 40.0%
! AGTCTTAAGGATTTGAGGTG+GGG - chr4_2:50369204-50369223 Msa0604740:intron 40.0%
GCATCTTACATACATCGAGT+TGG - chr4_2:50369311-50369330 Msa0604740:intron 40.0%
GCTCTGCAAATTGAACATTG+AGG - chr4_2:50369457-50369476 Msa0604740:intron 40.0%
CAGTAAAGATGCAAGCAAAC+TGG + chr4_2:50369615-50369634 None:intergenic 40.0%
! CAGTTTGCTTGCATCTTTAC+TGG - chr4_2:50369613-50369632 Msa0604740:CDS 40.0%
GTATGTGACAAATGCCCTTT+GGG + chr4_2:50369666-50369685 None:intergenic 40.0%
AGTATGTGACAAATGCCCTT+TGG + chr4_2:50369667-50369686 None:intergenic 40.0%
!! NNACGAATTTTGGGGGTCAT+TGG + chr4_2:50369776-50369795 None:intergenic 40.0%
ATTGGGTTTGAACCGGATTC+TGG + chr4_2:50363391-50363410 None:intergenic 45.0%
AGCTCGTTGAATGTCAGTCA+TGG + chr4_2:50363557-50363576 None:intergenic 45.0%
! TGTATTTGGGTTAGGGGCTT+AGG - chr4_2:50363681-50363700 Msa0604740:intron 45.0%
! GTATTTGGGTTAGGGGCTTA+GGG - chr4_2:50363682-50363701 Msa0604740:intron 45.0%
GTATAGAAAGAGATGGGGAC+CGG - chr4_2:50364218-50364237 Msa0604740:CDS 45.0%
TGACGAGCTAATTCCCATGT+AGG + chr4_2:50364273-50364292 None:intergenic 45.0%
TCTGCTTGACCTTTCCTAAG+TGG + chr4_2:50364424-50364443 None:intergenic 45.0%
AAGTAGAAACGGAAGCGGAT+CGG - chr4_2:50365009-50365028 Msa0604740:intron 45.0%
ACAAGCATTACAAGGAGCTC+TGG - chr4_2:50365187-50365206 Msa0604740:intron 45.0%
CAAGCATTACAAGGAGCTCT+GGG - chr4_2:50365188-50365207 Msa0604740:intron 45.0%
! TAAACAACGAGTTAGCCTCC+TGG - chr4_2:50365228-50365247 Msa0604740:intron 45.0%
TGAGCAGTTACATATCCAGG+AGG + chr4_2:50365246-50365265 None:intergenic 45.0%
! CATCATTTTACCACCTTCGG+TGG - chr4_2:50365269-50365288 Msa0604740:intron 45.0%
AAGCACTTTATGAAGCCTCC+CGG - chr4_2:50365547-50365566 Msa0604740:intron 45.0%
AATCTCGACCATCTGTTCTC+AGG - chr4_2:50366119-50366138 Msa0604740:intron 45.0%
ACGGGACGCAAAAATGAAAG+TGG - chr4_2:50367142-50367161 Msa0604740:intron 45.0%
CGGGACGCAAAAATGAAAGT+GGG - chr4_2:50367143-50367162 Msa0604740:intron 45.0%
! AATGTATTGGTCTGCACACC+CGG - chr4_2:50367309-50367328 Msa0604740:intron 45.0%
GTGTTTGGATACACGTTGCA+CGG - chr4_2:50367484-50367503 Msa0604740:intron 45.0%
!!! GTTTTTTTGGCCACTTGACG+TGG - chr4_2:50367582-50367601 Msa0604740:intron 45.0%
CAAATGGGCCATGAATAGCA+AGG + chr4_2:50367854-50367873 None:intergenic 45.0%
!! CTTGCTATTCATGGCCCATT+TGG - chr4_2:50367852-50367871 Msa0604740:intron 45.0%
! AGCATGGTTTGTCTACGCTT+TGG + chr4_2:50368355-50368374 None:intergenic 45.0%
! TTGAGTTGCCGAGAAAAGCA+TGG + chr4_2:50368371-50368390 None:intergenic 45.0%
CTCGGCAACTCAAACAAAGT+CGG - chr4_2:50368378-50368397 Msa0604740:intron 45.0%
GTTCCGCAAATGCAGACTAA+GGG + chr4_2:50368737-50368756 None:intergenic 45.0%
AGTTCCGCAAATGCAGACTA+AGG + chr4_2:50368738-50368757 None:intergenic 45.0%
AGTCTGCATTTGCGGAACTT+CGG - chr4_2:50368739-50368758 Msa0604740:intron 45.0%
!!! CTTTTTAGCCGTGCTGATTG+TGG - chr4_2:50368768-50368787 Msa0604740:intron 45.0%
! TCGTGTTCACCGTGTGTTTT+TGG - chr4_2:50368887-50368906 Msa0604740:intron 45.0%
! ATACCGTTGAAGTGCCTTCA+TGG - chr4_2:50369019-50369038 Msa0604740:intron 45.0%
! TACCGTTGAAGTGCCTTCAT+GGG - chr4_2:50369020-50369039 Msa0604740:intron 45.0%
AGTTCTCTTCGCTACTGATG+TGG - chr4_2:50369099-50369118 Msa0604740:intron 45.0%
! GTCTTAAGGATTTGAGGTGG+GGG - chr4_2:50369205-50369224 Msa0604740:intron 45.0%
CAGAGCAAATTTACCTTCGG+AGG + chr4_2:50369443-50369462 None:intergenic 45.0%
AAGGAAAGAACTGCTGCAAC+CGG - chr4_2:50369586-50369605 Msa0604740:CDS 45.0%
TCACTCAATGCACGCAAACA+GGG + chr4_2:50369986-50370005 None:intergenic 45.0%
!!! ATTGTTTTTATATAATTTTA+AGG + chr4_2:50364066-50364085 None:intergenic 5.0%
GGAGAGGTGGAAGAGACATT+GGG + chr4_2:50363408-50363427 None:intergenic 50.0%
TCTCTTCCTCATGCGCTTTG+TGG - chr4_2:50363577-50363596 Msa0604740:CDS 50.0%
!! GTTATTGGTGCCGCCAAAAC+TGG - chr4_2:50363607-50363626 Msa0604740:CDS 50.0%
GGCTTTCTCCAGCTGTTCAA+CGG + chr4_2:50364973-50364992 None:intergenic 50.0%
TTGAACAGCTGGAGAAAGCC+CGG - chr4_2:50364973-50364992 Msa0604740:intron 50.0%
TCAACGATTTCCACCGAAGG+TGG + chr4_2:50365282-50365301 None:intergenic 50.0%
CTCTTGGGTAACCCTCATCA+AGG - chr4_2:50367167-50367186 Msa0604740:intron 50.0%
AGGCCAGCACTAAAACGATC+TGG + chr4_2:50367228-50367247 None:intergenic 50.0%
ATGTGTTGTAGAAGGCGACC+GGG + chr4_2:50367330-50367349 None:intergenic 50.0%
CATGTGTTGTAGAAGGCGAC+CGG + chr4_2:50367331-50367350 None:intergenic 50.0%
! GTGTTTGGAACCACGTCAAG+TGG + chr4_2:50367595-50367614 None:intergenic 50.0%
GCTGACCGTATCCTTGATAG+TGG - chr4_2:50368292-50368311 Msa0604740:intron 50.0%
AGGCCCTTAGTCTGCATTTG+CGG - chr4_2:50368731-50368750 Msa0604740:intron 50.0%
CATTTGCGGAACTTCGGTTC+TGG - chr4_2:50368745-50368764 Msa0604740:intron 50.0%
!! CTCCCATGAAGGCACTTCAA+CGG + chr4_2:50369025-50369044 None:intergenic 50.0%
CCTGTTTCATCCTCCCATGA+AGG + chr4_2:50369036-50369055 None:intergenic 50.0%
CCTTCATGGGAGGATGAAAC+AGG - chr4_2:50369033-50369052 Msa0604740:intron 50.0%
! AGGATTTGAGGTGGGGGTAT+TGG - chr4_2:50369211-50369230 Msa0604740:intron 50.0%
TCCAGTTCATTCTCCTCCGA+AGG - chr4_2:50369427-50369446 Msa0604740:intron 50.0%
ACCTTCGGAGGAGAATGAAC+TGG + chr4_2:50369431-50369450 None:intergenic 50.0%
GGTTGCAGCAGTTCTTTCCT+TGG + chr4_2:50369587-50369606 None:intergenic 50.0%
GATGCAAGCAAACTGGACAC+CGG + chr4_2:50369608-50369627 None:intergenic 50.0%
GGGAGAGGTGGAAGAGACAT+TGG + chr4_2:50363409-50363428 None:intergenic 55.0%
TCACGACCACAAAGCGCATG+AGG + chr4_2:50363586-50363605 None:intergenic 55.0%
AAGAGATGGGGACCGGAAGA+TGG - chr4_2:50364225-50364244 Msa0604740:CDS 55.0%
AGAGATGGGGACCGGAAGAT+GGG - chr4_2:50364226-50364245 Msa0604740:CDS 55.0%
ATGCTCCCAACCCCATCTTC+CGG + chr4_2:50364240-50364259 None:intergenic 55.0%
TGAACAGCTGGAGAAAGCCC+GGG - chr4_2:50364974-50364993 Msa0604740:intron 55.0%
TACTTTCCTTAAGCGGGCCC+GGG + chr4_2:50364994-50365013 None:intergenic 55.0%
CTACTTTCCTTAAGCGGGCC+CGG + chr4_2:50364995-50365014 None:intergenic 55.0%
! GCGGATCGGTTTCGAGTGAA+TGG - chr4_2:50365023-50365042 Msa0604740:intron 55.0%
!! TTTAGTGCTGGCCTCCTCAC+TGG - chr4_2:50367234-50367253 Msa0604740:intron 55.0%
CGGTCGCCTTCTACAACACA+TGG - chr4_2:50367329-50367348 Msa0604740:intron 55.0%
GCTTCTTGGGCCACGAGAAA+TGG + chr4_2:50367510-50367529 None:intergenic 55.0%
AATGGTGAGGATCGTTCCCC+TGG - chr4_2:50368492-50368511 Msa0604740:intron 55.0%
GGCACTTCAACGGTATGCCA+GGG + chr4_2:50369015-50369034 None:intergenic 55.0%
AGGCACTTCAACGGTATGCC+AGG + chr4_2:50369016-50369035 None:intergenic 55.0%
! CGTTGAAGTGCCTTCATGGG+AGG - chr4_2:50369023-50369042 Msa0604740:intron 55.0%
GCTACTGATGTGGCTGCAAG+AGG - chr4_2:50369109-50369128 Msa0604740:intron 55.0%
AGCAGTCGACTGGGTTGTTC+AGG - chr4_2:50369147-50369166 Msa0604740:intron 55.0%
GTACCCAGAACTTCAGCAGC+AGG - chr4_2:50369640-50369659 Msa0604740:CDS 55.0%
AACTTCAGCAGCAGGCCCAA+AGG - chr4_2:50369648-50369667 Msa0604740:CDS 55.0%
ACTTCAGCAGCAGGCCCAAA+GGG - chr4_2:50369649-50369668 Msa0604740:CDS 55.0%
! GGTGCCGCCAAAACTGGTTC+TGG - chr4_2:50363613-50363632 Msa0604740:CDS 60.0%
GAGATGGGGACCGGAAGATG+GGG - chr4_2:50364227-50364246 Msa0604740:CDS 60.0%
GGAAGCAGCCGTTGAACAGC+TGG - chr4_2:50364962-50364981 Msa0604740:intron 60.0%
CGTTGCACGGCCATTTCTCG+TGG - chr4_2:50367497-50367516 Msa0604740:intron 60.0%
GGGCCTGCTGCTGAAGTTCT+GGG + chr4_2:50369646-50369665 None:intergenic 60.0%
TGGGCCTGCTGCTGAAGTTC+TGG + chr4_2:50369647-50369666 None:intergenic 60.0%
GGGGAGTTGTTGGGGAGAGG+TGG + chr4_2:50363421-50363440 None:intergenic 65.0%
ACGGGGGAGTTGTTGGGGAG+AGG + chr4_2:50363424-50363443 None:intergenic 65.0%
CTCCCCAACAACTCCCCCGT+CGG - chr4_2:50363424-50363443 Msa0604740:intron 65.0%
GGCACGTTCTCTCGCTACGC+CGG - chr4_2:50363460-50363479 Msa0604740:intron 65.0%
CTGTTCAAACCGGGCCACGC+CGG + chr4_2:50363482-50363501 None:intergenic 65.0%
TGGGGACCGGAAGATGGGGT+TGG - chr4_2:50364231-50364250 Msa0604740:intron 65.0%
GGGGACCGGAAGATGGGGTT+GGG - chr4_2:50364232-50364251 Msa0604740:intron 65.0%
AGAAAGCCCGGGCCCGCTTA+AGG - chr4_2:50364985-50365004 Msa0604740:intron 65.0%
!! AGTGCTGGCCTCCTCACTGG+TGG - chr4_2:50367237-50367256 Msa0604740:intron 65.0%
GACCACGACCACCAGTGAGG+AGG + chr4_2:50367248-50367267 None:intergenic 65.0%
GACGACCACGACCACCAGTG+AGG + chr4_2:50367251-50367270 None:intergenic 65.0%
CACTGGTGGTCGTGGTCGTC+AGG - chr4_2:50367251-50367270 Msa0604740:intron 65.0%
GGCCGACGGGGGAGTTGTTG+GGG + chr4_2:50363429-50363448 None:intergenic 70.0%
CGGCCGACGGGGGAGTTGTT+GGG + chr4_2:50363430-50363449 None:intergenic 70.0%
AGAACGTGCCGTCCGCGAGG+CGG + chr4_2:50363450-50363469 None:intergenic 70.0%
GAGAGAACGTGCCGTCCGCG+AGG + chr4_2:50363453-50363472 None:intergenic 70.0%
GTTCTCTCGCTACGCCGGCG+TGG - chr4_2:50363465-50363484 Msa0604740:intron 70.0%
GGCCTCCTCACTGGTGGTCG+TGG - chr4_2:50367243-50367262 Msa0604740:intron 70.0%
GCGGCCGACGGGGGAGTTGT+TGG + chr4_2:50363431-50363450 None:intergenic 75.0%
! CTCGCTACGCCGGCGTGGCC+CGG - chr4_2:50363470-50363489 Msa0604740:intron 80.0%
! CTCCCCCGTCGGCCGCCTCG+CGG - chr4_2:50363435-50363454 Msa0604740:intron 85.0%
! GTCCGCGAGGCGGCCGACGG+GGG + chr4_2:50363440-50363459 None:intergenic 85.0%
! CGTCCGCGAGGCGGCCGACG+GGG + chr4_2:50363441-50363460 None:intergenic 85.0%
! CCGTCCGCGAGGCGGCCGAC+GGG + chr4_2:50363442-50363461 None:intergenic 85.0%
! CCCGTCGGCCGCCTCGCGGA+CGG - chr4_2:50363439-50363458 Msa0604740:intron 85.0%
! GCCGTCCGCGAGGCGGCCGA+CGG + chr4_2:50363443-50363462 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 50363220 50370005 50363220 ID=Msa0604740;Name=Msa0604740
chr4_2 mRNA 50363220 50370005 50363220 ID=Msa0604740-mRNA-1;Parent=Msa0604740;Name=Msa0604740-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|0.88|0.37|0.33|9|0|479
chr4_2 exon 50369761 50370005 50369761 ID=Msa0604740-mRNA-1:exon:11884;Parent=Msa0604740-mRNA-1
chr4_2 exon 50369565 50369685 50369565 ID=Msa0604740-mRNA-1:exon:11883;Parent=Msa0604740-mRNA-1
chr4_2 exon 50368977 50369021 50368977 ID=Msa0604740-mRNA-1:exon:11882;Parent=Msa0604740-mRNA-1
chr4_2 exon 50368059 50368301 50368059 ID=Msa0604740-mRNA-1:exon:11881;Parent=Msa0604740-mRNA-1
chr4_2 exon 50364730 50364951 50364730 ID=Msa0604740-mRNA-1:exon:11880;Parent=Msa0604740-mRNA-1
chr4_2 exon 50364057 50364248 50364057 ID=Msa0604740-mRNA-1:exon:11879;Parent=Msa0604740-mRNA-1
chr4_2 exon 50363777 50363935 50363777 ID=Msa0604740-mRNA-1:exon:11878;Parent=Msa0604740-mRNA-1
chr4_2 exon 50363475 50363641 50363475 ID=Msa0604740-mRNA-1:exon:11877;Parent=Msa0604740-mRNA-1
chr4_2 exon 50363220 50363265 50363220 ID=Msa0604740-mRNA-1:exon:11876;Parent=Msa0604740-mRNA-1
chr4_2 CDS 50369761 50370005 50369761 ID=Msa0604740-mRNA-1:cds;Parent=Msa0604740-mRNA-1
chr4_2 CDS 50369565 50369685 50369565 ID=Msa0604740-mRNA-1:cds;Parent=Msa0604740-mRNA-1
chr4_2 CDS 50368977 50369021 50368977 ID=Msa0604740-mRNA-1:cds;Parent=Msa0604740-mRNA-1
chr4_2 CDS 50368059 50368301 50368059 ID=Msa0604740-mRNA-1:cds;Parent=Msa0604740-mRNA-1
chr4_2 CDS 50364730 50364951 50364730 ID=Msa0604740-mRNA-1:cds;Parent=Msa0604740-mRNA-1
chr4_2 CDS 50364057 50364248 50364057 ID=Msa0604740-mRNA-1:cds;Parent=Msa0604740-mRNA-1
chr4_2 CDS 50363777 50363935 50363777 ID=Msa0604740-mRNA-1:cds;Parent=Msa0604740-mRNA-1
chr4_2 CDS 50363475 50363641 50363475 ID=Msa0604740-mRNA-1:cds;Parent=Msa0604740-mRNA-1
chr4_2 CDS 50363220 50363265 50363220 ID=Msa0604740-mRNA-1:cds;Parent=Msa0604740-mRNA-1
Gene Sequence

>Msa0604740

ATGAGAAAACCCAAATCAAAGGAGTTTCGTAAAAAACAACTGAGAAAACCCAAATCAAAGGAGTTTCGTAAGAAACAACTGAGAAAATCCAAATCAAAGGAGTTTCGTAAGAAACAACGCTTACTAGTCGAAATCAACCTCTTGAATTCATGGATTCAATCTCAAAAACCAGAATCCGGTTCAAACCCAATGTCTCTTCCACCTCTCCCCAACAACTCCCCCGTCGGCCGCCTCGCGGACGGCACTTCCCAATTCGTTTCCATGACTGACATTCAACGAGCTTCTCTTCCTCATGCGCTTTGTGGTCGTGATGTTATTGGTGCCGCCAAAACTGGTTCTGGAAAAACACTTGCTTTCATTATTCCTGTGTTGGAGAAATTGTATAGAAAGAGATGGGGACCGGAAGATGGGAGAATCTTGAGAACTATTCAAAATTCAGAAGAACTACGGGAAGCAGCCGTTGAACAGCTGGAGAAAGCCCGGGCCCGCTTAAGGAAAGTAGAAACGGAAGCGGATCGGTTTCGAGTGAATGGTTATTCCGAGATAGAACGAGAAAAATTGAATTTAATTAATTCAATTTATACAACTTTGGAACAATTCGAAAATTACAAAAATGAAACGATTCATTTTGAACAACAAAGGGCGATTAATCAAGTTTTGGTACTAGATGAGGCTGACCGTATCCTTGATAGTGGATTCAAGAAGCAACTAAATGCAATCATCTCACAATTACCAAAGCGTAGACAAACCATGCTTTTCTCGGCAACTCAAACAAAGTCGGTTCAAGATCTTGCAAGACTAAGTTTGAAGGACCCAGAGTATATAAGTGTGCACAAAGAGTCTGTGACTGCAACTCCTACTCTTTTGAAGCAAATGGTAAAATTTGTGTTTGAGGCATTTAAGAAACTTCACCCTGGCATACCGTTGAAGTGCCTTCATGGGAGGATGAAACAGGAAAAAAGAATGGCAATATATTCCGAGTTCTGTGAGAATTGCTCAGTTCTCTTCGCTACTGATGTGGCTGCAAGAGGCCTTGATTTTAATAGAGCAGTCGACTGGGTTGTTCAGGTAGATTGTCCCGAGAATGTAGCATCTTACATACATCGAGTTGGCCGTACTGCTCGTTATAAATCTCTTGGAAAGTCAGTTTTATATCTATTGCCTTCAGAAACTAAGATGCTTGAAAAGTTAGAAGCAGGAAAGGTTCCAGTTCATTCTCCTCCGAAGCCAAGGAAAGAACTGCTGCAACCGGTGTCCAGTTTGCTTGCATCTTTACTGGTCAAGTACCCAGAACTTCAGCAGCAGGCCCAAAGGGCATTTGTCACATACTTGAGATCCATCCACCTCCAAAAAGATAAAGAGATCTTTGACGTTTTGAAACTTCCTATTGATGACTTGAGATATGGATTGTCTCGAACCCTGTTTGCGTGCATTGAGTGA
Protein sequence

>Msa0604740

MRKPKSKEFRKKQLRKPKSKEFRKKQLRKSKSKEFRKKQRLLVEINLLNSWIQSQKPESGSNPMSLPPLPNNSPVGRLADGTSQFVSMTDIQRASLPHALCGRDVIGAAKTGSGKTLAFIIPVLEKLYRKRWGPEDGRILRTIQNSEELREAAVEQLEKARARLRKVETEADRFRVNGYSEIEREKLNLINSIYTTLEQFENYKNETIHFEQQRAINQVLVLDEADRILDSGFKKQLNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDPEYISVHKESVTATPTLLKQMVKFVFEAFKKLHPGIPLKCLHGRMKQEKRMAIYSEFCENCSVLFATDVAARGLDFNRAVDWVVQVDCPENVASYIHRVGRTARYKSLGKSVLYLLPSETKMLEKLEAGKVPVHSPPKPRKELLQPVSSLLASLLVKYPELQQQAQRAFVTYLRSIHLQKDKEIFDVLKLPIDDLRYGLSRTLFACIE*