AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0924870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0924870 MtrunA17_Chr4g0015651 80.471 425 4 5 209 554 7 431 0.0 640
Msa0924870 MtrunA17_Chr4g0016741 80.471 425 4 5 209 554 7 431 0.0 640
Msa0924870 MtrunA17_CPg0492941 80.471 425 4 5 209 554 7 431 0.0 640
Msa0924870 MtrunA17_MTg0490471 54.042 433 111 6 210 554 9 441 1.38e-139 414
Msa0924870 MtrunA17_Chr2g0278821 84.656 189 15 2 380 554 24 212 1.42e-104 316
Msa0924870 MtrunA17_CPg0492961 94.118 119 2 1 95 208 49 167 7.09e-69 220
Msa0924870 MtrunA17_Chr2g0286451 65.574 183 8 2 271 398 7 189 2.19e-67 216
Msa0924870 MtrunA17_Chr4g0040631 88.034 117 4 1 209 315 7 123 9.17e-59 192
Msa0924870 MtrunA17_Chr4g0016711 98.765 81 1 0 1 81 1 81 4.21e-46 156
Msa0924870 MtrunA17_CPg0492971 98.765 81 1 0 1 81 1 81 4.21e-46 156
Msa0924870 MtrunA17_Chr4g0015621 98.765 81 1 0 1 81 1 81 4.21e-46 156
Msa0924870 MtrunA17_Chr4g0061471 73.333 75 8 1 292 354 1 75 1.05e-27 106
Msa0924870 MtrunA17_Chr1g0211291 27.714 350 166 10 227 502 44 380 2.49e-20 94.4
Msa0924870 MtrunA17_Chr7g0250051 27.507 349 167 10 227 502 43 378 7.39e-20 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0924870 ATCG00120.1 77.647 425 16 5 209 554 7 431 0.0 620
Msa0924870 ATMG01190.1 51.039 433 124 6 210 554 9 441 1.90e-130 390
Msa0924870 AT2G07698.1 49.260 473 150 7 172 554 239 711 5.86e-129 395
Msa0924870 ATCG00130.1 78.689 122 21 1 93 209 49 170 1.00e-57 191
Msa0924870 ATCG00140.1 95.062 81 4 0 1 81 1 81 5.31e-44 151
Msa0924870 AT4G38510.5 27.794 349 166 10 227 502 50 385 3.88e-21 97.1
Msa0924870 AT4G38510.1 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa0924870 AT4G38510.3 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa0924870 AT4G38510.4 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa0924870 AT4G38510.2 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa0924870 AT1G76030.1 28.378 296 140 7 279 502 82 377 6.30e-20 93.6
Msa0924870 AT1G20260.1 36.000 125 79 1 379 502 254 378 7.97e-15 77.4

Find 125 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGAAGCTTTAACTATTTA+TGG 0.037973 6_2:-67464698 Msa0924870:CDS
ACCAGTAAGTGAGGGTTATT+TGG 0.166311 6_2:-67462457 Msa0924870:CDS
TGTAGGCATTGCTTTGAATT+TGG 0.201612 6_2:-67462571 Msa0924870:CDS
CCCAAATAACCCTCACTTAC+TGG 0.241036 6_2:+67462456 None:intergenic
TTATTTACATTCTCGTCTTT+TGG 0.245014 6_2:-67461875 Msa0924870:CDS
AAATGTTGGTGTTGTATTAA+TGG 0.258988 6_2:-67462541 Msa0924870:CDS
GGCCAGCGAGAATTAATTAT+TGG 0.267680 6_2:-67462264 Msa0924870:CDS
CGGAAGCAGAGGACAAAATA+AGG 0.270738 6_2:-67464748 Msa0924870:CDS
GGTAGCTGGTAAATTAAAAT+TGG 0.278592 6_2:-67461617 Msa0924870:CDS
TCTCGCTGGCCACGCCCTAT+AGG 0.298734 6_2:+67462276 None:intergenic
GCCGTCGGGCTTGCTTCTAT+TGG 0.311843 6_2:-67464830 Msa0924870:CDS
GCTGCTTCTGTTATCGCTGC+TGG 0.315135 6_2:-67464857 Msa0924870:CDS
TGGAAGCTTTAACTATTTAT+GGG 0.316470 6_2:-67464697 Msa0924870:CDS
CTCGCTGGCCACGCCCTATA+GGG 0.318797 6_2:+67462277 None:intergenic
CTACTTTCCTTAAGCGGGCC+CGG 0.340021 6_2:+67463148 None:intergenic
ATTGATTCTATGATCCCTAT+AGG 0.359827 6_2:-67462291 Msa0924870:CDS
GCTGCAGGGCAAGCTGTAGA+AGG 0.363265 6_2:-67464785 Msa0924870:CDS
GCGATAAGCCTGTGCTTGTT+TGG 0.364708 6_2:+67461957 None:intergenic
GCCAGCGAGAATTAATTATT+GGG 0.365780 6_2:-67462263 Msa0924870:CDS
GGGTACTTTATTACTTAGTC+TGG 0.366228 6_2:-67464726 Msa0924870:CDS
CCTGATTGGGTCTCAACTAT+TGG 0.368964 6_2:+67461799 None:intergenic
TGGTAAATTAAAATTGGAAT+TGG 0.382867 6_2:-67461611 Msa0924870:CDS
CACAGTGAGAGGAGCTGATT+GGG 0.383779 6_2:+67461480 None:intergenic
TAATTCAATTTATACAACTT+TGG 0.388293 6_2:-67463058 Msa0924870:CDS
ATTTCTCCTCGACCATCAAT+AGG 0.391542 6_2:+67462408 None:intergenic
AATGTTGGTGTTGTATTAAT+GGG 0.391664 6_2:-67462540 Msa0924870:CDS
TCCTTATACAGGTGCAGCTC+TGG 0.392160 6_2:-67462034 Msa0924870:intron
GCCCTAGCTAAACCTATTGA+TGG 0.393369 6_2:-67462420 Msa0924870:CDS
CCAATAGTTGAGACCCAATC+AGG 0.395916 6_2:-67461799 Msa0924870:CDS
AGATACAATTCTCAATCAAC+AGG 0.401486 6_2:-67462208 Msa0924870:CDS
CCGGGATACGCTTCGCGACC+TGG 0.409309 6_2:+67461907 None:intergenic
AAGCTGAAACATCTCCTGAT+TGG 0.409535 6_2:+67461785 None:intergenic
AGAAAGCCCGGGCCCGCTTA+AGG 0.414131 6_2:-67463155 Msa0924870:CDS
GCTAAATTAAGTTCTCAGTT+AGG 0.415873 6_2:-67461844 Msa0924870:intron
GCTTCTATTGGACCTGGAGT+TGG 0.416315 6_2:-67464818 Msa0924870:CDS
CCAGTAAGTGAGGGTTATTT+GGG 0.424091 6_2:-67462456 Msa0924870:CDS
ATTATTGGGGACAGACAAAC+AGG 0.427629 6_2:-67462249 Msa0924870:CDS
TCGCTGCTGGGTTGGCCGTC+GGG 0.427770 6_2:-67464844 Msa0924870:CDS
ATCGCTGCTGGGTTGGCCGT+CGG 0.428270 6_2:-67464845 Msa0924870:CDS
AAATATTTGGCCATCTGTAA+TGG 0.434228 6_2:+67461741 None:intergenic
TTGATTCTATGATCCCTATA+GGG 0.437674 6_2:-67462290 Msa0924870:CDS
CCACAGTGAGAGGAGCTGAT+TGG 0.438205 6_2:+67461479 None:intergenic
GTAATGGAAATTACATTAGT+AGG 0.444650 6_2:+67461757 None:intergenic
CGTTTCTACTTTCCTTAAGC+GGG 0.444690 6_2:+67463143 None:intergenic
ATATGTGTTTATGTAGCTAT+TGG 0.445393 6_2:-67462174 Msa0924870:intron
GCGGATCGGTTTCGAGTGAA+TGG 0.446998 6_2:-67463117 Msa0924870:intron
TAAAGCTACGCAAAATCAAT+TGG 0.449089 6_2:-67461539 Msa0924870:CDS
TTCAAAATTCAGAAGAACTA+CGG 0.449969 6_2:-67463200 Msa0924870:CDS
GGAAGCAGCCGTTGAACAGC+TGG 0.450450 6_2:-67463178 Msa0924870:CDS
ACAAGCATTACAAGGAGCTC+TGG 0.452163 6_2:-67462953 Msa0924870:CDS
TTCGTAATAGAAGAGACATT+TGG 0.452176 6_2:+67461935 None:intergenic
AGCTGAAACATCTCCTGATT+GGG 0.452206 6_2:+67461786 None:intergenic
GGAAGTTCGGTAAAAGCAAC+AGG 0.457398 6_2:-67462495 Msa0924870:CDS
AAAAGATTAAACAAAAGGAT+TGG 0.459809 6_2:+67464646 None:intergenic
AGCTTTAACTATTTATGGGC+TGG 0.460263 6_2:-67464693 Msa0924870:CDS
CTGCTTCTGTTATCGCTGCT+GGG 0.461552 6_2:-67464856 Msa0924870:CDS
TACTTTCCTTAAGCGGGCCC+GGG 0.461743 6_2:+67463149 None:intergenic
ATAAGCCTGTGCTTGTTTGG+AGG 0.462375 6_2:+67461960 None:intergenic
CGTGTATGAGCCTCTTCAAA+CGG 0.465005 6_2:-67462325 Msa0924870:CDS
TTGAACAGCTGGAGAAAGCC+CGG 0.472109 6_2:-67463167 Msa0924870:CDS
GGAAGCAGAGGACAAAATAA+GGG 0.473459 6_2:-67464747 Msa0924870:CDS
AGAAGGGATTGCGCGACAAC+CGG 0.475077 6_2:-67464768 Msa0924870:CDS
TCGAGGAGAAATTTCAGCTT+CGG 0.476522 6_2:-67462397 Msa0924870:CDS
CCAGGTCGCGAAGCGTATCC+CGG 0.478786 6_2:-67461907 Msa0924870:CDS
GGGCTTGCTTCTATTGGACC+TGG 0.481695 6_2:-67464824 Msa0924870:CDS
TAACTGAGAACTTAATTTAG+CGG 0.485288 6_2:+67461846 None:intergenic
CGCCGATCCAACTCTGGAAA+CGG 0.485937 6_2:+67461663 None:intergenic
TATATTGCTCAATACGTTCA+CGG 0.487151 6_2:+67462712 None:intergenic
AAATTTCAGCTTCGGAATCT+CGG 0.492871 6_2:-67462389 Msa0924870:intron
GTTGGTCAAGGTACAGCTGC+AGG 0.497139 6_2:-67464800 Msa0924870:CDS
GGTGTTGTATTAATGGGTGA+TGG 0.501676 6_2:-67462534 Msa0924870:CDS
GGCTTTCTCCAGCTGTTCAA+CGG 0.504402 6_2:+67463170 None:intergenic
TCTGCCGATCTATTCAATGC+TGG 0.509351 6_2:-67461715 Msa0924870:CDS
GCTGATACAAGAGGGAAGTT+CGG 0.510716 6_2:-67462508 Msa0924870:CDS
TCAAAATTCAGAAGAACTAC+GGG 0.510719 6_2:-67463199 Msa0924870:CDS
GTGTATGAGCCTCTTCAAAC+GGG 0.511475 6_2:-67462324 Msa0924870:CDS
TTCTGTTATCGCTGCTGGGT+TGG 0.514112 6_2:-67464852 Msa0924870:CDS
TGATTAAAGTGTGACGTTCA+CGG 0.516487 6_2:+67461995 None:intergenic
CCGTTTCTACTTTCCTTAAG+CGG 0.521089 6_2:+67463142 None:intergenic
TAAGCCTGTGCTTGTTTGGA+GGG 0.526272 6_2:+67461961 None:intergenic
GAAATACCCACATTAATAGC+TGG 0.538501 6_2:+67461685 None:intergenic
CCCCAATAATTAATTCTCGC+TGG 0.539649 6_2:+67462262 None:intergenic
GACCATCAATAGGTTTAGCT+AGG 0.542268 6_2:+67462418 None:intergenic
ATTGGACCTGGAGTTGGTCA+AGG 0.543278 6_2:-67464812 Msa0924870:CDS
ATCTGTTCTTCCACAGTGAG+AGG 0.551959 6_2:+67461469 None:intergenic
TGCGCGACAACCGGAAGCAG+AGG 0.554171 6_2:-67464759 Msa0924870:CDS
AATGTAATTTCCATTACAGA+TGG 0.557336 6_2:-67461751 Msa0924870:CDS
AAAGCCATGAAACAGGTAGC+TGG 0.558354 6_2:-67461631 Msa0924870:intron
CAAGCATTACAAGGAGCTCT+GGG 0.568354 6_2:-67462952 Msa0924870:CDS
AAGTAGAAACGGAAGCGGAT+CGG 0.570689 6_2:-67463131 Msa0924870:CDS
CCGCTTAAGGAAAGTAGAAA+CGG 0.573518 6_2:-67463142 Msa0924870:CDS
CGATCCCTCCAAACAAGCAC+AGG 0.574680 6_2:-67461965 Msa0924870:CDS
TGAACAGCTGGAGAAAGCCC+GGG 0.575165 6_2:-67463166 Msa0924870:CDS
TGCTCAGATACCAGTAAGTG+AGG 0.577261 6_2:-67462466 Msa0924870:CDS
TGAATTAGTCGAATTTGAAG+AGG 0.580561 6_2:-67462598 Msa0924870:CDS
CTGCAGGGCAAGCTGTAGAA+GGG 0.582070 6_2:-67464784 Msa0924870:CDS
GCAATAAGTCCCGTTTGAAG+AGG 0.589598 6_2:+67462315 None:intergenic
ACAGGTACTGTACTTCAAGT+AGG 0.592569 6_2:-67462666 Msa0924870:CDS
GCTGTACCTTGACCAACTCC+AGG 0.593501 6_2:+67464806 None:intergenic
GAATTTGAAGAGGGTACTGT+AGG 0.593991 6_2:-67462588 Msa0924870:CDS
CGATTAATCAAGTGCAACAG+AGG 0.596922 6_2:-67462984 Msa0924870:CDS
CTTCTATTACGAAGACCACC+AGG 0.597315 6_2:-67461925 Msa0924870:CDS
ACCATCAATAGGTTTAGCTA+GGG 0.601516 6_2:+67462419 None:intergenic
ATCAGACCAGCTATTAATGT+GGG 0.604091 6_2:-67461691 Msa0924870:CDS
GAGTTACATTTACGTACGAT+CGG 0.617220 6_2:-67462904 Msa0924870:intron
GAATTAGTCGAATTTGAAGA+GGG 0.619600 6_2:-67462597 Msa0924870:CDS
GCTAAACCTATTGATGGTCG+AGG 0.620970 6_2:-67462414 Msa0924870:CDS
AAGGAAAGTAGAAACGGAAG+CGG 0.622485 6_2:-67463136 Msa0924870:CDS
AATCAGACCAGCTATTAATG+TGG 0.625394 6_2:-67461692 Msa0924870:CDS
GATTCCAGCATTGAATAGAT+CGG 0.626418 6_2:+67461711 None:intergenic
TCTATGATCCCTATAGGGCG+TGG 0.628110 6_2:-67462285 Msa0924870:CDS
CCAGCGAGAATTAATTATTG+GGG 0.636830 6_2:-67462262 Msa0924870:CDS
TCCAATAGAAGCAAGCCCGA+CGG 0.638086 6_2:+67464829 None:intergenic
ACAGAAGCAGCAGAAATCAG+TGG 0.640161 6_2:+67464869 None:intergenic
TTGGTCAAGGTACAGCTGCA+GGG 0.643472 6_2:-67464799 Msa0924870:CDS
GATTAATCAAGTGCAACAGA+GGG 0.644246 6_2:-67462983 Msa0924870:CDS
ACGCAAAATCAATTGGCAAG+AGG 0.645378 6_2:-67461532 Msa0924870:CDS
CGTTTGAAGAGGCTCATACA+CGG 0.655862 6_2:+67462326 None:intergenic
GAAGCAGAGGACAAAATAAG+GGG 0.658398 6_2:-67464746 Msa0924870:CDS
GATGGTTTGCTGATACAAGA+GGG 0.671964 6_2:-67462516 Msa0924870:CDS
GCTCAGATACCAGTAAGTGA+GGG 0.673181 6_2:-67462465 Msa0924870:CDS
TGATGGTTTGCTGATACAAG+AGG 0.676056 6_2:-67462517 Msa0924870:CDS
ACTGTACTTCAAGTAGGCGA+CGG 0.682410 6_2:-67462660 Msa0924870:CDS
GGATACGCTTCGCGACCTGG+TGG 0.699302 6_2:+67461910 None:intergenic
GATACAATTCTCAATCAACA+GGG 0.744742 6_2:-67462207 Msa0924870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAAAGATTAAACAAA+AGG + chr6_2:67461306-67461325 None:intergenic 10.0%
!! TCAATTCTAAATTAAATAAA+GGG + chr6_2:67461528-67461547 None:intergenic 10.0%
!! TTCAATTCTAAATTAAATAA+AGG + chr6_2:67461529-67461548 None:intergenic 10.0%
!! ACTAATTATGAATATAATAA+AGG + chr6_2:67464755-67464774 None:intergenic 10.0%
!! AATTCTAAATTAAATAAAGG+GGG + chr6_2:67461526-67461545 None:intergenic 15.0%
!! CAATTCTAAATTAAATAAAG+GGG + chr6_2:67461527-67461546 None:intergenic 15.0%
!! AATCAAAAAATCAAAAAACT+GGG - chr6_2:67461791-67461810 Msa0924870:CDS 15.0%
!!! TGTATTAATTTTTTTTGGAA+AGG - chr6_2:67461977-67461996 Msa0924870:CDS 15.0%
!!! GTATTAATTTTTTTTGGAAA+GGG - chr6_2:67461978-67461997 Msa0924870:CDS 15.0%
!! ATAAATTAATCAGAATTCTT+TGG - chr6_2:67462417-67462436 Msa0924870:CDS 15.0%
!! CAATACAAGATTAAAATATT+TGG + chr6_2:67462499-67462518 None:intergenic 15.0%
!!! CAAATATTTTAATCTTGTAT+TGG - chr6_2:67462497-67462516 Msa0924870:CDS 15.0%
!! TAATTCAATTTATACAACTT+TGG - chr6_2:67462886-67462905 Msa0924870:intron 15.0%
!! TTCAAATTAAGAAATATTCA+TGG - chr6_2:67463175-67463194 Msa0924870:CDS 15.0%
!!! TGTATTTACAATTTTTACTT+CGG + chr6_2:67463261-67463280 None:intergenic 15.0%
!! AAAAGATTAAACAAAAGGAT+TGG + chr6_2:67461301-67461320 None:intergenic 20.0%
!! ATAAATTGTAGGAGTTAAAT+CGG + chr6_2:67461441-67461460 None:intergenic 20.0%
!! TAGATTCTATATTCTCTAAT+TGG + chr6_2:67461629-67461648 None:intergenic 20.0%
!! GAATCAAAAAATCAAAAAAC+TGG - chr6_2:67461790-67461809 Msa0924870:CDS 20.0%
!!! TAGATTTGTTGCTAAAATAT+CGG + chr6_2:67461934-67461953 None:intergenic 20.0%
!!! CTAGGTGTATTAATTTTTTT+TGG - chr6_2:67461972-67461991 Msa0924870:CDS 20.0%
!! GTTTATTTCAAAGAATAGAT+TGG - chr6_2:67462015-67462034 Msa0924870:CDS 20.0%
!! ATTCTGATTAATTTATACGT+AGG + chr6_2:67462413-67462432 None:intergenic 20.0%
!! TACAAGATTAAAATATTTGG+AGG + chr6_2:67462496-67462515 None:intergenic 20.0%
!! GAAGTAAAAATTGTAAATAC+AGG - chr6_2:67463260-67463279 Msa0924870:CDS 20.0%
!! ATGTAAATAAAAAACATCTC+CGG + chr6_2:67464059-67464078 None:intergenic 20.0%
!! TGGTAAATTAAAATTGGAAT+TGG - chr6_2:67464333-67464352 Msa0924870:intron 20.0%
!! CAGATAATAACTATTTATAC+TGG - chr6_2:67464493-67464512 Msa0924870:intron 20.0%
!! GATATGATTTCGTTAAATTT+AGG + chr6_2:67464604-67464623 None:intergenic 20.0%
!! ATGGAAGCTTTAACTATTTA+TGG - chr6_2:67461246-67461265 Msa0924870:intron 25.0%
!! TGGAAGCTTTAACTATTTAT+GGG - chr6_2:67461247-67461266 Msa0924870:intron 25.0%
!!! AATACATATTGTTTTTTCCG+TGG - chr6_2:67461340-67461359 Msa0924870:intron 25.0%
! CCTACAATTTATTCTTCATT+CGG - chr6_2:67461449-67461468 Msa0924870:intron 25.0%
!! AAAATTAGTCTATCCATAAG+AGG - chr6_2:67461826-67461845 Msa0924870:intron 25.0%
! AATGAAGCAAAGAAAAGAAT+CGG + chr6_2:67461877-67461896 None:intergenic 25.0%
!! TATAATGAAAAAAGTGCAGT+TGG + chr6_2:67462047-67462066 None:intergenic 25.0%
! TTTCTACCACTATGTTAATA+CGG - chr6_2:67462261-67462280 Msa0924870:CDS 25.0%
! TTCTCTTTACGATGAAAAAT+AGG - chr6_2:67462335-67462354 Msa0924870:intron 25.0%
! TTTGCTGACAATTATTTGTT+TGG - chr6_2:67462460-67462479 Msa0924870:CDS 25.0%
! TGTTTAGAAATAGAGAAAAG+AGG - chr6_2:67462535-67462554 Msa0924870:CDS 25.0%
! CTCATTCGATAATAAAGATA+GGG - chr6_2:67462563-67462582 Msa0924870:CDS 25.0%
! CATGAATCTTTCAATTCATT+TGG + chr6_2:67462619-67462638 None:intergenic 25.0%
! TGAATTGAAAGATTCATGTT+TGG - chr6_2:67462621-67462640 Msa0924870:intron 25.0%
! TTCAAAATTCAGAAGAACTA+CGG - chr6_2:67462744-67462763 Msa0924870:intron 25.0%
!! GATTCATTTTGAACAACAAA+GGG - chr6_2:67462937-67462956 Msa0924870:CDS 25.0%
! GTGCTAATATTGATATGTTT+GGG - chr6_2:67463062-67463081 Msa0924870:CDS 25.0%
! TGCTAATATTGATATGTTTG+GGG - chr6_2:67463063-67463082 Msa0924870:CDS 25.0%
! TCTACTAGAATATAGAGTAT+AGG - chr6_2:67463117-67463136 Msa0924870:intron 25.0%
!!! TGAATTTGATTCTTTTTCGA+AGG + chr6_2:67463159-67463178 None:intergenic 25.0%
!! AATTTGGAATCCAAAAATGT+TGG - chr6_2:67463389-67463408 Msa0924870:intron 25.0%
!! TAATACAACACCAACATTTT+TGG + chr6_2:67463402-67463421 None:intergenic 25.0%
!!! AAATGTTGGTGTTGTATTAA+TGG - chr6_2:67463403-67463422 Msa0924870:intron 25.0%
!!! AATGTTGGTGTTGTATTAAT+GGG - chr6_2:67463404-67463423 Msa0924870:intron 25.0%
! ATATGTGTTTATGTAGCTAT+TGG - chr6_2:67463770-67463789 Msa0924870:intron 25.0%
! TAACTACTTTACAAGAAAGA+GGG - chr6_2:67463822-67463841 Msa0924870:intron 25.0%
! TGTAAATAAAAAACATCTCC+GGG + chr6_2:67464058-67464077 None:intergenic 25.0%
!! TTATTTACATTCTCGTCTTT+TGG - chr6_2:67464069-67464088 Msa0924870:intron 25.0%
! TAACTGAGAACTTAATTTAG+CGG + chr6_2:67464101-67464120 None:intergenic 25.0%
!! GTAATGGAAATTACATTAGT+AGG + chr6_2:67464190-67464209 None:intergenic 25.0%
! AATGTAATTTCCATTACAGA+TGG - chr6_2:67464193-67464212 Msa0924870:intron 25.0%
! TGATTCATTAGAAATTGATC+AGG - chr6_2:67464531-67464550 Msa0924870:intron 25.0%
! TAAATTTCTCGTTGAGTTAA+GGG - chr6_2:67464558-67464577 Msa0924870:intron 25.0%
!!! ATTACTTAGTCTGGCTTTTA+TGG - chr6_2:67461227-67461246 Msa0924870:intron 30.0%
CCGAATGAAGAATAAATTGT+AGG + chr6_2:67461452-67461471 None:intergenic 30.0%
AACTAGTATCTACTTCTAAG+AGG - chr6_2:67461579-67461598 Msa0924870:CDS 30.0%
!! TAAGAGGTATCGTTCTTATA+GGG - chr6_2:67461595-67461614 Msa0924870:CDS 30.0%
! CTTTTCTTTGCTTCATTTAC+TGG - chr6_2:67461880-67461899 Msa0924870:CDS 30.0%
ATAAATCTAAGTGTAGTGCT+AGG - chr6_2:67461954-67461973 Msa0924870:CDS 30.0%
! TCTCTATCAACCAAGAATTT+TGG - chr6_2:67462183-67462202 Msa0924870:CDS 30.0%
CAATTTCCGTATTAACATAG+TGG + chr6_2:67462270-67462289 None:intergenic 30.0%
CACTATGTTAATACGGAAAT+TGG - chr6_2:67462268-67462287 Msa0924870:CDS 30.0%
CGATGAAAAATAGGAAAAAC+AGG - chr6_2:67462344-67462363 Msa0924870:intron 30.0%
TCAATTCCGCATTGTATAAA+AGG + chr6_2:67462387-67462406 None:intergenic 30.0%
AGAAATAGAGAAAAGAGGAT+AGG - chr6_2:67462540-67462559 Msa0924870:CDS 30.0%
GCTCATTCGATAATAAAGAT+AGG - chr6_2:67462562-67462581 Msa0924870:CDS 30.0%
AGATAGGGAAATTTCCTATA+CGG - chr6_2:67462578-67462597 Msa0924870:CDS 30.0%
TGAAAGATTCATGTTTGGTT+CGG - chr6_2:67462626-67462645 Msa0924870:intron 30.0%
TCAAAATTCAGAAGAACTAC+GGG - chr6_2:67462745-67462764 Msa0924870:intron 30.0%
! CAATTTTTCTCGTTCTATCT+CGG + chr6_2:67462858-67462877 None:intergenic 30.0%
! CGATTCATTTTGAACAACAA+AGG - chr6_2:67462936-67462955 Msa0924870:CDS 30.0%
! GTTTTACAACAAGCATTACA+AGG - chr6_2:67462983-67463002 Msa0924870:CDS 30.0%
GGTGCTAATATTGATATGTT+TGG - chr6_2:67463061-67463080 Msa0924870:CDS 30.0%
TATATTGCTCAATACGTTCA+CGG + chr6_2:67463235-67463254 None:intergenic 30.0%
! TTATGGTCTTGATGAAGTAA+TGG - chr6_2:67463319-67463338 Msa0924870:intron 30.0%
TGAATTAGTCGAATTTGAAG+AGG - chr6_2:67463346-67463365 Msa0924870:intron 30.0%
GAATTAGTCGAATTTGAAGA+GGG - chr6_2:67463347-67463366 Msa0924870:intron 30.0%
! ATTGATTCTATGATCCCTAT+AGG - chr6_2:67463653-67463672 Msa0924870:intron 30.0%
TTGATTCTATGATCCCTATA+GGG - chr6_2:67463654-67463673 Msa0924870:intron 30.0%
AGATACAATTCTCAATCAAC+AGG - chr6_2:67463736-67463755 Msa0924870:intron 30.0%
GATACAATTCTCAATCAACA+GGG - chr6_2:67463737-67463756 Msa0924870:intron 30.0%
GTAACTACTTTACAAGAAAG+AGG - chr6_2:67463821-67463840 Msa0924870:intron 30.0%
AACTACTTTACAAGAAAGAG+GGG - chr6_2:67463823-67463842 Msa0924870:intron 30.0%
AATGGAGTACACTATTATAG+TGG - chr6_2:67463847-67463866 Msa0924870:intron 30.0%
TTCGTAATAGAAGAGACATT+TGG + chr6_2:67464012-67464031 None:intergenic 30.0%
GCTAAATTAAGTTCTCAGTT+AGG - chr6_2:67464100-67464119 Msa0924870:intron 30.0%
AAATATTTGGCCATCTGTAA+TGG + chr6_2:67464206-67464225 None:intergenic 30.0%
GATCGGCAGATAAAAATATT+TGG + chr6_2:67464219-67464238 None:intergenic 30.0%
TCAAATTAAAGCCATGAAAC+AGG - chr6_2:67464306-67464325 Msa0924870:intron 30.0%
GGTAGCTGGTAAATTAAAAT+TGG - chr6_2:67464327-67464346 Msa0924870:intron 30.0%
TAAAGCTACGCAAAATCAAT+TGG - chr6_2:67464405-67464424 Msa0924870:intron 30.0%
ACTATTTATACTGGAACGAA+TGG - chr6_2:67464502-67464521 Msa0924870:intron 30.0%
GTAAATTTCTCGTTGAGTTA+AGG - chr6_2:67464557-67464576 Msa0924870:intron 30.0%
GGGTACTTTATTACTTAGTC+TGG - chr6_2:67461218-67461237 Msa0924870:intron 35.0%
! AGCTTTAACTATTTATGGGC+TGG - chr6_2:67461251-67461270 Msa0924870:intron 35.0%
CATTGGACTAAATAAAGGGA+CGG + chr6_2:67461499-67461518 None:intergenic 35.0%
CGCTCATTGGACTAAATAAA+GGG + chr6_2:67461503-67461522 None:intergenic 35.0%
!! CTAAGAGGTATCGTTCTTAT+AGG - chr6_2:67461594-67461613 Msa0924870:CDS 35.0%
! ATGAAAAAAGTGCAGTTGGT+TGG + chr6_2:67462043-67462062 None:intergenic 35.0%
TTTAGTAAGAAGTCATTCGC+CGG + chr6_2:67462090-67462109 None:intergenic 35.0%
! TGGTAATGCTCCAAAATTCT+TGG + chr6_2:67462196-67462215 None:intergenic 35.0%
!!! AGAATTTTGGAGCATTACCA+TGG - chr6_2:67462196-67462215 Msa0924870:CDS 35.0%
!! AAACTGGTTAGCTTTAACCA+TGG + chr6_2:67462216-67462235 None:intergenic 35.0%
ATTGCGTCTAAACTTCAAAC+TGG + chr6_2:67462232-67462251 None:intergenic 35.0%
ATTCCGCATTGTATAAAAGG+AGG + chr6_2:67462384-67462403 None:intergenic 35.0%
! GAAAGATTCATGTTTGGTTC+GGG - chr6_2:67462627-67462646 Msa0924870:intron 35.0%
GATTAATCAAGTGCAACAGA+GGG - chr6_2:67462961-67462980 Msa0924870:CDS 35.0%
GAGTTACATTTACGTACGAT+CGG - chr6_2:67463040-67463059 Msa0924870:CDS 35.0%
ACTAATTTCATCTGCACGAA+TGG + chr6_2:67463204-67463223 None:intergenic 35.0%
! TGTAGGCATTGCTTTGAATT+TGG - chr6_2:67463373-67463392 Msa0924870:intron 35.0%
ACCATCAATAGGTTTAGCTA+GGG + chr6_2:67463528-67463547 None:intergenic 35.0%
AAATTTCAGCTTCGGAATCT+CGG - chr6_2:67463555-67463574 Msa0924870:intron 35.0%
GCCAGCGAGAATTAATTATT+GGG - chr6_2:67463681-67463700 Msa0924870:intron 35.0%
CCAGCGAGAATTAATTATTG+GGG - chr6_2:67463682-67463701 Msa0924870:intron 35.0%
TGATTAAAGTGTGACGTTCA+CGG + chr6_2:67463952-67463971 None:intergenic 35.0%
TTAAGTTCTCAGTTAGGTGA+AGG - chr6_2:67464106-67464125 Msa0924870:intron 35.0%
! GATTCCAGCATTGAATAGAT+CGG + chr6_2:67464236-67464255 None:intergenic 35.0%
AATCAGACCAGCTATTAATG+TGG - chr6_2:67464252-67464271 Msa0924870:intron 35.0%
ATCAGACCAGCTATTAATGT+GGG - chr6_2:67464253-67464272 Msa0924870:intron 35.0%
GAAATACCCACATTAATAGC+TGG + chr6_2:67464262-67464281 None:intergenic 35.0%
CTGAATAGCTTCCTTCAAAA+GGG + chr6_2:67464659-67464678 None:intergenic 35.0%
! GATGGAACTCTTTTTACTTC+AGG - chr6_2:67464684-67464703 Msa0924870:CDS 35.0%
!!! CTTATTTTGTCCTCTGCTTC+CGG + chr6_2:67461198-67461217 None:intergenic 40.0%
GGAAGCAGAGGACAAAATAA+GGG - chr6_2:67461197-67461216 Msa0924870:intron 40.0%
GAAGCAGAGGACAAAATAAG+GGG - chr6_2:67461198-67461217 Msa0924870:intron 40.0%
ATAGCAGCAATGAAAGTCCA+CGG + chr6_2:67461360-67461379 None:intergenic 40.0%
CTAAATAAAGGGACGGAAGA+AGG + chr6_2:67461492-67461511 None:intergenic 40.0%
GCGCTCATTGGACTAAATAA+AGG + chr6_2:67461504-67461523 None:intergenic 40.0%
TATGATCGCATCTCCTCTTA+TGG + chr6_2:67461842-67461861 None:intergenic 40.0%
CTAGAAAAACGTGCATGATC+CGG - chr6_2:67462068-67462087 Msa0924870:intron 40.0%
CAATGAATCGCGAAATGCTA+TGG + chr6_2:67462147-67462166 None:intergenic 40.0%
CATAGCATTTCGCGATTCAT+TGG - chr6_2:67462145-67462164 Msa0924870:intron 40.0%
! ACGCCTCCTTTTATACAATG+CGG - chr6_2:67462378-67462397 Msa0924870:intron 40.0%
TCTCACACTCAATTCCGTAT+AGG + chr6_2:67462595-67462614 None:intergenic 40.0%
CGTTTCTACTTTCCTTAAGC+GGG + chr6_2:67462804-67462823 None:intergenic 40.0%
CCGTTTCTACTTTCCTTAAG+CGG + chr6_2:67462805-67462824 None:intergenic 40.0%
CCGCTTAAGGAAAGTAGAAA+CGG - chr6_2:67462802-67462821 Msa0924870:intron 40.0%
AAGGAAAGTAGAAACGGAAG+CGG - chr6_2:67462808-67462827 Msa0924870:intron 40.0%
CGATTAATCAAGTGCAACAG+AGG - chr6_2:67462960-67462979 Msa0924870:CDS 40.0%
! ACAGGTACTGTACTTCAAGT+AGG - chr6_2:67463278-67463297 Msa0924870:CDS 40.0%
!! GAATTTGAAGAGGGTACTGT+AGG - chr6_2:67463356-67463375 Msa0924870:intron 40.0%
! GGTGTTGTATTAATGGGTGA+TGG - chr6_2:67463410-67463429 Msa0924870:intron 40.0%
!! TGATGGTTTGCTGATACAAG+AGG - chr6_2:67463427-67463446 Msa0924870:intron 40.0%
!! GATGGTTTGCTGATACAAGA+GGG - chr6_2:67463428-67463447 Msa0924870:intron 40.0%
ACCAGTAAGTGAGGGTTATT+TGG - chr6_2:67463487-67463506 Msa0924870:intron 40.0%
CCAGTAAGTGAGGGTTATTT+GGG - chr6_2:67463488-67463507 Msa0924870:intron 40.0%
GACCATCAATAGGTTTAGCT+AGG + chr6_2:67463529-67463548 None:intergenic 40.0%
ATTTCTCCTCGACCATCAAT+AGG + chr6_2:67463539-67463558 None:intergenic 40.0%
TCGAGGAGAAATTTCAGCTT+CGG - chr6_2:67463547-67463566 Msa0924870:intron 40.0%
GAACGTCTGGAAATAATACC+GGG + chr6_2:67463599-67463618 None:intergenic 40.0%
GGAACGTCTGGAAATAATAC+CGG + chr6_2:67463600-67463619 None:intergenic 40.0%
GGCCAGCGAGAATTAATTAT+TGG - chr6_2:67463680-67463699 Msa0924870:intron 40.0%
CCCCAATAATTAATTCTCGC+TGG + chr6_2:67463685-67463704 None:intergenic 40.0%
ATTATTGGGGACAGACAAAC+AGG - chr6_2:67463695-67463714 Msa0924870:intron 40.0%
!! TGGTCAAAAAGCATCTTCTG+TGG - chr6_2:67463790-67463809 Msa0924870:intron 40.0%
TTTACAAGAAAGAGGGGCAA+TGG - chr6_2:67463829-67463848 Msa0924870:intron 40.0%
AGCTGAAACATCTCCTGATT+GGG + chr6_2:67464161-67464180 None:intergenic 40.0%
AAGCTGAAACATCTCCTGAT+TGG + chr6_2:67464162-67464181 None:intergenic 40.0%
TTTACCAGCTACCTGTTTCA+TGG + chr6_2:67464320-67464339 None:intergenic 40.0%
ACGCAAAATCAATTGGCAAG+AGG - chr6_2:67464412-67464431 Msa0924870:intron 40.0%
TCTTCTACCAAGACATTCAC+TGG - chr6_2:67464622-67464641 Msa0924870:intron 40.0%
CTTCTACCAAGACATTCACT+GGG - chr6_2:67464623-67464642 Msa0924870:intron 40.0%
TTCTACCAAGACATTCACTG+GGG - chr6_2:67464624-67464643 Msa0924870:intron 40.0%
CCTGAATAGCTTCCTTCAAA+AGG + chr6_2:67464660-67464679 None:intergenic 40.0%
!! CCTTTTGAAGGAAGCTATTC+AGG - chr6_2:67464657-67464676 Msa0924870:intron 40.0%
ACAGAAGCAGCAGAAATCAG+TGG + chr6_2:67461078-67461097 None:intergenic 45.0%
CGGAAGCAGAGGACAAAATA+AGG - chr6_2:67461196-67461215 Msa0924870:intron 45.0%
!! TAAATAAAGGGGGCGCTCAT+TGG + chr6_2:67461516-67461535 None:intergenic 45.0%
GGTATCAAACCCGAAACTTC+CGG + chr6_2:67461913-67461932 None:intergenic 45.0%
AAGTAGAAACGGAAGCGGAT+CGG - chr6_2:67462813-67462832 Msa0924870:intron 45.0%
ACAAGCATTACAAGGAGCTC+TGG - chr6_2:67462991-67463010 Msa0924870:CDS 45.0%
CAAGCATTACAAGGAGCTCT+GGG - chr6_2:67462992-67463011 Msa0924870:CDS 45.0%
ACTGTACTTCAAGTAGGCGA+CGG - chr6_2:67463284-67463303 Msa0924870:CDS 45.0%
GACGGCATTGCTCGTATTTA+TGG - chr6_2:67463302-67463321 Msa0924870:intron 45.0%
GGTCTTGATGAAGTAATGGC+AGG - chr6_2:67463323-67463342 Msa0924870:intron 45.0%
GCTGATACAAGAGGGAAGTT+CGG - chr6_2:67463436-67463455 Msa0924870:intron 45.0%
GGAAGTTCGGTAAAAGCAAC+AGG - chr6_2:67463449-67463468 Msa0924870:intron 45.0%
TGCTCAGATACCAGTAAGTG+AGG - chr6_2:67463478-67463497 Msa0924870:intron 45.0%
GCTCAGATACCAGTAAGTGA+GGG - chr6_2:67463479-67463498 Msa0924870:intron 45.0%
CCCAAATAACCCTCACTTAC+TGG + chr6_2:67463491-67463510 None:intergenic 45.0%
GCCCTAGCTAAACCTATTGA+TGG - chr6_2:67463524-67463543 Msa0924870:intron 45.0%
! GCTAAACCTATTGATGGTCG+AGG - chr6_2:67463530-67463549 Msa0924870:intron 45.0%
TCTGGAAATAATACCGGGAG+CGG + chr6_2:67463594-67463613 None:intergenic 45.0%
CGTTTGAAGAGGCTCATACA+CGG + chr6_2:67463621-67463640 None:intergenic 45.0%
CGTGTATGAGCCTCTTCAAA+CGG - chr6_2:67463619-67463638 Msa0924870:intron 45.0%
GTGTATGAGCCTCTTCAAAC+GGG - chr6_2:67463620-67463639 Msa0924870:intron 45.0%
GCAATAAGTCCCGTTTGAAG+AGG + chr6_2:67463632-67463651 None:intergenic 45.0%
!! GCGAGGTATTGTAATGTAGC+TGG + chr6_2:67463890-67463909 None:intergenic 45.0%
CAATACCTCGCTCCTTATAC+AGG - chr6_2:67463899-67463918 Msa0924870:intron 45.0%
TAAGCCTGTGCTTGTTTGGA+GGG + chr6_2:67463986-67464005 None:intergenic 45.0%
ATAAGCCTGTGCTTGTTTGG+AGG + chr6_2:67463987-67464006 None:intergenic 45.0%
CTTCTATTACGAAGACCACC+AGG - chr6_2:67464019-67464038 Msa0924870:intron 45.0%
CCTGATTGGGTCTCAACTAT+TGG + chr6_2:67464148-67464167 None:intergenic 45.0%
CCAATAGTTGAGACCCAATC+AGG - chr6_2:67464145-67464164 Msa0924870:intron 45.0%
TCTGCCGATCTATTCAATGC+TGG - chr6_2:67464229-67464248 Msa0924870:intron 45.0%
GGTATTTCCGTTTCCAGAGT+TGG - chr6_2:67464274-67464293 Msa0924870:intron 45.0%
TTCCGTTTCCAGAGTTGGAT+CGG - chr6_2:67464279-67464298 Msa0924870:intron 45.0%
AAAGCCATGAAACAGGTAGC+TGG - chr6_2:67464313-67464332 Msa0924870:intron 45.0%
ATCTGTTCTTCCACAGTGAG+AGG + chr6_2:67464478-67464497 None:intergenic 45.0%
GGAAGCTATTCAGGAACAGA+TGG - chr6_2:67464666-67464685 Msa0924870:CDS 45.0%
CTGCTTCTGTTATCGCTGCT+GGG - chr6_2:67461088-67461107 Msa0924870:intron 50.0%
TTCTGTTATCGCTGCTGGGT+TGG - chr6_2:67461092-67461111 Msa0924870:intron 50.0%
TCCAATAGAAGCAAGCCCGA+CGG + chr6_2:67461118-67461137 None:intergenic 50.0%
GCTTCTATTGGACCTGGAGT+TGG - chr6_2:67461126-67461145 Msa0924870:intron 50.0%
! ATTGGACCTGGAGTTGGTCA+AGG - chr6_2:67461132-67461151 Msa0924870:intron 50.0%
TTGGTCAAGGTACAGCTGCA+GGG - chr6_2:67461145-67461164 Msa0924870:intron 50.0%
TTCATTTACTGGCCATCCGC+CGG - chr6_2:67461891-67461910 Msa0924870:CDS 50.0%
ATCAAACCCGAAACTTCCGG+CGG + chr6_2:67461910-67461929 None:intergenic 50.0%
GGCTTTCTCCAGCTGTTCAA+CGG + chr6_2:67462777-67462796 None:intergenic 50.0%
TTGAACAGCTGGAGAAAGCC+CGG - chr6_2:67462777-67462796 Msa0924870:intron 50.0%
TTAATCGAATCTCCCGCTCC+CGG - chr6_2:67463578-67463597 Msa0924870:intron 50.0%
CTGGAAATAATACCGGGAGC+GGG + chr6_2:67463593-67463612 None:intergenic 50.0%
TCTATGATCCCTATAGGGCG+TGG - chr6_2:67463659-67463678 Msa0924870:intron 50.0%
AGCATCTTCTGTGGCTCAAG+TGG - chr6_2:67463799-67463818 Msa0924870:intron 50.0%
TCCTTATACAGGTGCAGCTC+TGG - chr6_2:67463910-67463929 Msa0924870:intron 50.0%
GCGATAAGCCTGTGCTTGTT+TGG + chr6_2:67463990-67464009 None:intergenic 50.0%
CACAGTGAGAGGAGCTGATT+GGG + chr6_2:67464467-67464486 None:intergenic 50.0%
TGCTTCCCCAGTGAATGTCT+TGG + chr6_2:67464632-67464651 None:intergenic 50.0%
! GGAAGCAGAAGCCCTTTTGA+AGG - chr6_2:67464645-67464664 Msa0924870:intron 50.0%
GCTGCTTCTGTTATCGCTGC+TGG - chr6_2:67461087-67461106 Msa0924870:intron 55.0%
! GGGCTTGCTTCTATTGGACC+TGG - chr6_2:67461120-67461139 Msa0924870:intron 55.0%
GCTGTACCTTGACCAACTCC+AGG + chr6_2:67461141-67461160 None:intergenic 55.0%
GTTGGTCAAGGTACAGCTGC+AGG - chr6_2:67461144-67461163 Msa0924870:intron 55.0%
CTGCAGGGCAAGCTGTAGAA+GGG - chr6_2:67461160-67461179 Msa0924870:intron 55.0%
AGAAGGGATTGCGCGACAAC+CGG - chr6_2:67461176-67461195 Msa0924870:intron 55.0%
TGAACAGCTGGAGAAAGCCC+GGG - chr6_2:67462778-67462797 Msa0924870:intron 55.0%
TACTTTCCTTAAGCGGGCCC+GGG + chr6_2:67462798-67462817 None:intergenic 55.0%
CTACTTTCCTTAAGCGGGCC+CGG + chr6_2:67462799-67462818 None:intergenic 55.0%
! GCGGATCGGTTTCGAGTGAA+TGG - chr6_2:67462827-67462846 Msa0924870:intron 55.0%
AGGCTCATACACGGAACGTC+TGG + chr6_2:67463612-67463631 None:intergenic 55.0%
CTGCACCTGTATAAGGAGCG+AGG + chr6_2:67463907-67463926 None:intergenic 55.0%
GCCAGAGCTGCACCTGTATA+AGG + chr6_2:67463914-67463933 None:intergenic 55.0%
CGATCCCTCCAAACAAGCAC+AGG - chr6_2:67463979-67463998 Msa0924870:intron 55.0%
! CGCCGATCCAACTCTGGAAA+CGG + chr6_2:67464284-67464303 None:intergenic 55.0%
CGTTTCCAGAGTTGGATCGG+CGG - chr6_2:67464282-67464301 Msa0924870:intron 55.0%
CCACAGTGAGAGGAGCTGAT+TGG + chr6_2:67464468-67464487 None:intergenic 55.0%
CCAATCAGCTCCTCTCACTG+TGG - chr6_2:67464465-67464484 Msa0924870:intron 55.0%
! GCCGTCGGGCTTGCTTCTAT+TGG - chr6_2:67461114-67461133 Msa0924870:intron 60.0%
GCTGCAGGGCAAGCTGTAGA+AGG - chr6_2:67461159-67461178 Msa0924870:intron 60.0%
TGGCCATCCGCCGGAAGTTT+CGG - chr6_2:67461900-67461919 Msa0924870:CDS 60.0%
AACCCGAAACTTCCGGCGGA+TGG + chr6_2:67461906-67461925 None:intergenic 60.0%
GGAAGCAGCCGTTGAACAGC+TGG - chr6_2:67462766-67462785 Msa0924870:intron 60.0%
TTGAGCCGCCGATCCAACTC+TGG + chr6_2:67464290-67464309 None:intergenic 60.0%
!! ATCGCTGCTGGGTTGGCCGT+CGG - chr6_2:67461099-67461118 Msa0924870:intron 65.0%
TGCGCGACAACCGGAAGCAG+AGG - chr6_2:67461185-67461204 Msa0924870:intron 65.0%
GGCCATCCGCCGGAAGTTTC+GGG - chr6_2:67461901-67461920 Msa0924870:CDS 65.0%
AGAAAGCCCGGGCCCGCTTA+AGG - chr6_2:67462789-67462808 Msa0924870:intron 65.0%
CTCGCTGGCCACGCCCTATA+GGG + chr6_2:67463670-67463689 None:intergenic 65.0%
TCTCGCTGGCCACGCCCTAT+AGG + chr6_2:67463671-67463690 None:intergenic 65.0%
GGATACGCTTCGCGACCTGG+TGG + chr6_2:67464037-67464056 None:intergenic 65.0%
CCAGGTCGCGAAGCGTATCC+CGG - chr6_2:67464037-67464056 Msa0924870:intron 65.0%
!! TCGCTGCTGGGTTGGCCGTC+GGG - chr6_2:67461100-67461119 Msa0924870:intron 70.0%
CCGGGATACGCTTCGCGACC+TGG + chr6_2:67464040-67464059 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 67461069 67464897 67461069 ID=Msa0924870;Name=Msa0924870
chr6_2 mRNA 67461069 67464897 67461069 ID=Msa0924870-mRNA-1;Parent=Msa0924870;Name=Msa0924870-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|0|0|0.9|0|0|10|0|556
chr6_2 exon 67464658 67464897 67464658 ID=Msa0924870-mRNA-1:exon:10668;Parent=Msa0924870-mRNA-1
chr6_2 exon 67463118 67463304 67463118 ID=Msa0924870-mRNA-1:exon:10667;Parent=Msa0924870-mRNA-1
chr6_2 exon 67462905 67463102 67462905 ID=Msa0924870-mRNA-1:exon:10666;Parent=Msa0924870-mRNA-1
chr6_2 exon 67462652 67462753 67462652 ID=Msa0924870-mRNA-1:exon:10665;Parent=Msa0924870-mRNA-1
chr6_2 exon 67462390 67462621 67462390 ID=Msa0924870-mRNA-1:exon:10664;Parent=Msa0924870-mRNA-1
chr6_2 exon 67462175 67462353 67462175 ID=Msa0924870-mRNA-1:exon:10663;Parent=Msa0924870-mRNA-1
chr6_2 exon 67461845 67462045 67461845 ID=Msa0924870-mRNA-1:exon:10662;Parent=Msa0924870-mRNA-1
chr6_2 exon 67461675 67461838 67461675 ID=Msa0924870-mRNA-1:exon:10661;Parent=Msa0924870-mRNA-1
chr6_2 exon 67461483 67461638 67461483 ID=Msa0924870-mRNA-1:exon:10660;Parent=Msa0924870-mRNA-1
chr6_2 exon 67461069 67461080 67461069 ID=Msa0924870-mRNA-1:exon:10659;Parent=Msa0924870-mRNA-1
chr6_2 CDS 67464658 67464897 67464658 ID=Msa0924870-mRNA-1:cds;Parent=Msa0924870-mRNA-1
chr6_2 CDS 67463118 67463304 67463118 ID=Msa0924870-mRNA-1:cds;Parent=Msa0924870-mRNA-1
chr6_2 CDS 67462905 67463102 67462905 ID=Msa0924870-mRNA-1:cds;Parent=Msa0924870-mRNA-1
chr6_2 CDS 67462652 67462753 67462652 ID=Msa0924870-mRNA-1:cds;Parent=Msa0924870-mRNA-1
chr6_2 CDS 67462390 67462621 67462390 ID=Msa0924870-mRNA-1:cds;Parent=Msa0924870-mRNA-1
chr6_2 CDS 67462175 67462353 67462175 ID=Msa0924870-mRNA-1:cds;Parent=Msa0924870-mRNA-1
chr6_2 CDS 67461845 67462045 67461845 ID=Msa0924870-mRNA-1:cds;Parent=Msa0924870-mRNA-1
chr6_2 CDS 67461675 67461838 67461675 ID=Msa0924870-mRNA-1:cds;Parent=Msa0924870-mRNA-1
chr6_2 CDS 67461483 67461638 67461483 ID=Msa0924870-mRNA-1:cds;Parent=Msa0924870-mRNA-1
chr6_2 CDS 67461069 67461080 67461069 ID=Msa0924870-mRNA-1:cds;Parent=Msa0924870-mRNA-1
Gene Sequence

>Msa0924870

ATGGATCCACTGATTTCTGCTGCTTCTGTTATCGCTGCTGGGTTGGCCGTCGGGCTTGCTTCTATTGGACCTGGAGTTGGTCAAGGTACAGCTGCAGGGCAAGCTGTAGAAGGGATTGCGCGACAACCGGAAGCAGAGGACAAAATAAGGGGTACTTTATTACTTAGTCTGGCTTTTATGGAAGCTTTAACTATTTATGGGCTGGTTGTAGCATTAGCACTTTTATTTGCCAATCCTTTTACATTTTTAAATAAATGCAAAGAGAATCTACTTTCATTAAGTGATTTATTAGATAATCGAAAACAGAGAATCTTGAGAACTATTCAAAATTCAGAAGAACTACGGGAAGCAGCCGTTGAACAGCTGGAGAAAGCCCGGGCCCGCTTAAGGAAAGTAGAAACGGAAGCGGATCGGTTTCGAGTGAATGAACGAGAAAAATTGAATTTAATTAATTCAATTTATACAACTTTGGAACAATTCGAAAATTACAAAAATGAAACGATTCATTTTGAACAACAAAGGGCGATTAATCAAGTGCAACAGAGGGTTTTACAACAAGCATTACAAGGAGCTCTGGGAACTCTGAATAGTTGCTTAAACAACGAGTTACATTTACGTACGATCGATGAAATTAGTAAAATTATCCGTGAACGTATTGAGCAATATAATACCGAAGTAAAAATTGTAAATACAGGTACTGTACTTCAAGTAGGCGACGGCATTGCTCGTGAATTAGTCGAATTTGAAGAGGGTACTGTAGGCATTGCTTTGAATTTGGAATCCAAAAATGTTGGTGTTGTATTAATGGGTGATGGTTTGCTGATACAAGAGGGAAGTTCGGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGGTTATTTGGGTCGTGTTGTAAATGCCCTAGCTAAACCTATTGATGGTCGAGGAGAAATTTCAGCTTCGGAATCTCGACGTTCCGTGTATGAGCCTCTTCAAACGGGACTTATTGCTATTGATTCTATGATCCCTATAGGGCGTGGCCAGCGAGAATTAATTATTGGGGACAGACAAACAGGTAAAACAGCAGTAGCAACAGATACAATTCTCAATCAACAGGGACAAAATGTAATATGTGTTTATGTAGCTATTGGTGCAGCTCTGGCTGAATATTTTATGTACCGTGAACGTCACACTTTAATCATTTATGACGATCCCTCCAAACAAGCACAGGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCACCAGGTCGCGAAGCGTATCCCGGAGATGTTTTTTATTTACATTCTCGTCTTTTGGAAAGAGCCGCTAAATTAAGTTCTCAGTTAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCAGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTTTTATCTGCCGATCTATTCAATGCTGGAATCAGACCAGCTATTAATGTGGGTATTTCCGTTTCCAGAGTAGCTGGTAAATTAAAATTGGAATTGGCACAATTCGCAGAATTAGAAGCTTTTGCACAATTCGCTTCTGATCTCGATAAAGCTACGCAAAATCAATTGGCAAGAGGTCAACGATTGCGCGAGTTGCTTAAACAATCCCAATCAGCTCCTCTCACTATACGAATATAA

Protein sequence

>Msa0924870

MDPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEDKIRGTLLLSLAFMEALTIYGLVVALALLFANPFTFLNKCKENLLSLSDLLDNRKQRILRTIQNSEELREAAVEQLEKARARLRKVETEADRFRVNEREKLNLINSIYTTLEQFENYKNETIHFEQQRAINQVQQRVLQQALQGALGTLNSCLNNELHLRTIDEISKIIRERIEQYNTEVKIVNTGTVLQVGDGIARELVEFEEGTVGIALNLESKNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEGYLGRVVNALAKPIDGRGEISASESRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTIRI*