AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0582910


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0582910 MtrunA17_Chr4g0015651 80.471 425 4 5 209 554 7 431 0.0 640
Msa0582910 MtrunA17_Chr4g0016741 80.471 425 4 5 209 554 7 431 0.0 640
Msa0582910 MtrunA17_CPg0492941 80.471 425 4 5 209 554 7 431 0.0 640
Msa0582910 MtrunA17_MTg0490471 54.042 433 111 6 210 554 9 441 1.38e-139 414
Msa0582910 MtrunA17_Chr2g0278821 84.656 189 15 2 380 554 24 212 1.42e-104 316
Msa0582910 MtrunA17_CPg0492961 94.118 119 2 1 95 208 49 167 7.09e-69 220
Msa0582910 MtrunA17_Chr2g0286451 65.574 183 8 2 271 398 7 189 2.19e-67 216
Msa0582910 MtrunA17_Chr4g0040631 88.034 117 4 1 209 315 7 123 9.17e-59 192
Msa0582910 MtrunA17_Chr4g0016711 98.765 81 1 0 1 81 1 81 4.21e-46 156
Msa0582910 MtrunA17_CPg0492971 98.765 81 1 0 1 81 1 81 4.21e-46 156
Msa0582910 MtrunA17_Chr4g0015621 98.765 81 1 0 1 81 1 81 4.21e-46 156
Msa0582910 MtrunA17_Chr4g0061471 73.333 75 8 1 292 354 1 75 1.05e-27 106
Msa0582910 MtrunA17_Chr1g0211291 27.714 350 166 10 227 502 44 380 2.49e-20 94.4
Msa0582910 MtrunA17_Chr7g0250051 27.507 349 167 10 227 502 43 378 7.39e-20 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0582910 ATCG00120.1 77.647 425 16 5 209 554 7 431 0.0 620
Msa0582910 ATMG01190.1 51.039 433 124 6 210 554 9 441 1.90e-130 390
Msa0582910 AT2G07698.1 49.260 473 150 7 172 554 239 711 5.86e-129 395
Msa0582910 ATCG00130.1 78.689 122 21 1 93 209 49 170 1.00e-57 191
Msa0582910 ATCG00140.1 95.062 81 4 0 1 81 1 81 5.31e-44 151
Msa0582910 AT4G38510.5 27.794 349 166 10 227 502 50 385 3.88e-21 97.1
Msa0582910 AT4G38510.1 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa0582910 AT4G38510.3 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa0582910 AT4G38510.4 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa0582910 AT4G38510.2 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa0582910 AT1G76030.1 28.378 296 140 7 279 502 82 377 6.30e-20 93.6
Msa0582910 AT1G20260.1 36.000 125 79 1 379 502 254 378 7.97e-15 77.4

Find 125 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGAAGCTTTAACTATTTA+TGG 0.037973 4_2:-1282589 Msa0582910:CDS
ACCAGTAAGTGAGGGTTATT+TGG 0.166311 4_2:-1280351 Msa0582910:CDS
TGTAGGCATTGCTTTGAATT+TGG 0.201612 4_2:-1280465 Msa0582910:CDS
CCCAAATAACCCTCACTTAC+TGG 0.241036 4_2:+1280350 None:intergenic
TTATTTACATTCTCGTCTTT+TGG 0.245014 4_2:-1279769 Msa0582910:CDS
AAATGTTGGTGTTGTATTAA+TGG 0.258988 4_2:-1280435 Msa0582910:CDS
GGCCAGCGAGAATTAATTAT+TGG 0.267680 4_2:-1280158 Msa0582910:CDS
CGGAAGCAGAGGACAAAATA+AGG 0.270738 4_2:-1282639 Msa0582910:CDS
GGTAGCTGGTAAATTAAAAT+TGG 0.278592 4_2:-1279511 Msa0582910:CDS
TCTCGCTGGCCACGCCCTAT+AGG 0.298734 4_2:+1280170 None:intergenic
GCCGTCGGGCTTGCTTCTAT+TGG 0.311843 4_2:-1282721 Msa0582910:CDS
GCTGCTTCTGTTATCGCTGC+TGG 0.315135 4_2:-1282748 Msa0582910:CDS
TGGAAGCTTTAACTATTTAT+GGG 0.316470 4_2:-1282588 Msa0582910:CDS
CTCGCTGGCCACGCCCTATA+GGG 0.318797 4_2:+1280171 None:intergenic
CTACTTTCCTTAAGCGGGCC+CGG 0.340021 4_2:+1281041 None:intergenic
ATTGATTCTATGATCCCTAT+AGG 0.359827 4_2:-1280185 Msa0582910:CDS
GCTGCAGGGCAAGCTGTAGA+AGG 0.363265 4_2:-1282676 Msa0582910:CDS
GCGATAAGCCTGTGCTTGTT+TGG 0.364708 4_2:+1279851 None:intergenic
GCCAGCGAGAATTAATTATT+GGG 0.365780 4_2:-1280157 Msa0582910:CDS
GGGTACTTTATTACTTAGTC+TGG 0.366228 4_2:-1282617 Msa0582910:CDS
CCTGATTGGGTCTCAACTAT+TGG 0.368964 4_2:+1279693 None:intergenic
TGGTAAATTAAAATTGGAAT+TGG 0.382867 4_2:-1279505 Msa0582910:CDS
CACAGTGAGAGGAGCTGATT+GGG 0.383779 4_2:+1279374 None:intergenic
TAATTCAATTTATACAACTT+TGG 0.388293 4_2:-1280951 Msa0582910:CDS
ATTTCTCCTCGACCATCAAT+AGG 0.391542 4_2:+1280302 None:intergenic
AATGTTGGTGTTGTATTAAT+GGG 0.391664 4_2:-1280434 Msa0582910:CDS
TCCTTATACAGGTGCAGCTC+TGG 0.392160 4_2:-1279928 Msa0582910:intron
GCCCTAGCTAAACCTATTGA+TGG 0.393369 4_2:-1280314 Msa0582910:CDS
CCAATAGTTGAGACCCAATC+AGG 0.395916 4_2:-1279693 Msa0582910:CDS
AGATACAATTCTCAATCAAC+AGG 0.401486 4_2:-1280102 Msa0582910:CDS
CCGGGATACGCTTCGCGACC+TGG 0.409309 4_2:+1279801 None:intergenic
AAGCTGAAACATCTCCTGAT+TGG 0.409535 4_2:+1279679 None:intergenic
AGAAAGCCCGGGCCCGCTTA+AGG 0.414131 4_2:-1281048 Msa0582910:CDS
GCTAAATTAAGTTCTCAGTT+AGG 0.415873 4_2:-1279738 Msa0582910:intron
GCTTCTATTGGACCTGGAGT+TGG 0.416315 4_2:-1282709 Msa0582910:CDS
CCAGTAAGTGAGGGTTATTT+GGG 0.424091 4_2:-1280350 Msa0582910:CDS
ATTATTGGGGACAGACAAAC+AGG 0.427629 4_2:-1280143 Msa0582910:CDS
TCGCTGCTGGGTTGGCCGTC+GGG 0.427770 4_2:-1282735 Msa0582910:CDS
ATCGCTGCTGGGTTGGCCGT+CGG 0.428270 4_2:-1282736 Msa0582910:CDS
AAATATTTGGCCATCTGTAA+TGG 0.434228 4_2:+1279635 None:intergenic
TTGATTCTATGATCCCTATA+GGG 0.437674 4_2:-1280184 Msa0582910:CDS
CCACAGTGAGAGGAGCTGAT+TGG 0.438205 4_2:+1279373 None:intergenic
GTAATGGAAATTACATTAGT+AGG 0.444650 4_2:+1279651 None:intergenic
CGTTTCTACTTTCCTTAAGC+GGG 0.444690 4_2:+1281036 None:intergenic
ATATGTGTTTATGTAGCTAT+TGG 0.445393 4_2:-1280068 Msa0582910:intron
GCGGATCGGTTTCGAGTGAA+TGG 0.446998 4_2:-1281010 Msa0582910:intron
TAAAGCTACGCAAAATCAAT+TGG 0.449089 4_2:-1279433 Msa0582910:CDS
TTCAAAATTCAGAAGAACTA+CGG 0.449969 4_2:-1281093 Msa0582910:CDS
GGAAGCAGCCGTTGAACAGC+TGG 0.450450 4_2:-1281071 Msa0582910:CDS
ACAAGCATTACAAGGAGCTC+TGG 0.452163 4_2:-1280846 Msa0582910:CDS
TTCGTAATAGAAGAGACATT+TGG 0.452176 4_2:+1279829 None:intergenic
AGCTGAAACATCTCCTGATT+GGG 0.452206 4_2:+1279680 None:intergenic
GGAAGTTCGGTAAAAGCAAC+AGG 0.457398 4_2:-1280389 Msa0582910:CDS
AAAAGATTAAACAAAAGGAT+TGG 0.459809 4_2:+1282537 None:intergenic
AGCTTTAACTATTTATGGGC+TGG 0.460263 4_2:-1282584 Msa0582910:CDS
CTGCTTCTGTTATCGCTGCT+GGG 0.461552 4_2:-1282747 Msa0582910:CDS
TACTTTCCTTAAGCGGGCCC+GGG 0.461743 4_2:+1281042 None:intergenic
ATAAGCCTGTGCTTGTTTGG+AGG 0.462375 4_2:+1279854 None:intergenic
CGTGTATGAGCCTCTTCAAA+CGG 0.465005 4_2:-1280219 Msa0582910:CDS
TTGAACAGCTGGAGAAAGCC+CGG 0.472109 4_2:-1281060 Msa0582910:CDS
GGAAGCAGAGGACAAAATAA+GGG 0.473459 4_2:-1282638 Msa0582910:CDS
AGAAGGGATTGCGCGACAAC+CGG 0.475077 4_2:-1282659 Msa0582910:CDS
TCGAGGAGAAATTTCAGCTT+CGG 0.476522 4_2:-1280291 Msa0582910:CDS
CCAGGTCGCGAAGCGTATCC+CGG 0.478786 4_2:-1279801 Msa0582910:CDS
GGGCTTGCTTCTATTGGACC+TGG 0.481695 4_2:-1282715 Msa0582910:CDS
TAACTGAGAACTTAATTTAG+CGG 0.485288 4_2:+1279740 None:intergenic
CGCCGATCCAACTCTGGAAA+CGG 0.485937 4_2:+1279557 None:intergenic
TATATTGCTCAATACGTTCA+CGG 0.487151 4_2:+1280606 None:intergenic
AAATTTCAGCTTCGGAATCT+CGG 0.492871 4_2:-1280283 Msa0582910:intron
GTTGGTCAAGGTACAGCTGC+AGG 0.497139 4_2:-1282691 Msa0582910:CDS
GGTGTTGTATTAATGGGTGA+TGG 0.501676 4_2:-1280428 Msa0582910:CDS
GGCTTTCTCCAGCTGTTCAA+CGG 0.504402 4_2:+1281063 None:intergenic
TCTGCCGATCTATTCAATGC+TGG 0.509351 4_2:-1279609 Msa0582910:CDS
GCTGATACAAGAGGGAAGTT+CGG 0.510716 4_2:-1280402 Msa0582910:CDS
TCAAAATTCAGAAGAACTAC+GGG 0.510719 4_2:-1281092 Msa0582910:CDS
GTGTATGAGCCTCTTCAAAC+GGG 0.511475 4_2:-1280218 Msa0582910:CDS
TTCTGTTATCGCTGCTGGGT+TGG 0.514112 4_2:-1282743 Msa0582910:CDS
TGATTAAAGTGTGACGTTCA+CGG 0.516487 4_2:+1279889 None:intergenic
CCGTTTCTACTTTCCTTAAG+CGG 0.521089 4_2:+1281035 None:intergenic
TAAGCCTGTGCTTGTTTGGA+GGG 0.526272 4_2:+1279855 None:intergenic
GAAATACCCACATTAATAGC+TGG 0.538501 4_2:+1279579 None:intergenic
CCCCAATAATTAATTCTCGC+TGG 0.539649 4_2:+1280156 None:intergenic
GACCATCAATAGGTTTAGCT+AGG 0.542268 4_2:+1280312 None:intergenic
ATTGGACCTGGAGTTGGTCA+AGG 0.543278 4_2:-1282703 Msa0582910:CDS
ATCTGTTCTTCCACAGTGAG+AGG 0.551959 4_2:+1279363 None:intergenic
TGCGCGACAACCGGAAGCAG+AGG 0.554171 4_2:-1282650 Msa0582910:CDS
AATGTAATTTCCATTACAGA+TGG 0.557336 4_2:-1279645 Msa0582910:CDS
AAAGCCATGAAACAGGTAGC+TGG 0.558354 4_2:-1279525 Msa0582910:intron
CAAGCATTACAAGGAGCTCT+GGG 0.568354 4_2:-1280845 Msa0582910:CDS
AAGTAGAAACGGAAGCGGAT+CGG 0.570689 4_2:-1281024 Msa0582910:CDS
CCGCTTAAGGAAAGTAGAAA+CGG 0.573518 4_2:-1281035 Msa0582910:CDS
CGATCCCTCCAAACAAGCAC+AGG 0.574680 4_2:-1279859 Msa0582910:CDS
TGAACAGCTGGAGAAAGCCC+GGG 0.575165 4_2:-1281059 Msa0582910:CDS
TGCTCAGATACCAGTAAGTG+AGG 0.577261 4_2:-1280360 Msa0582910:CDS
TGAATTAGTCGAATTTGAAG+AGG 0.580561 4_2:-1280492 Msa0582910:CDS
CTGCAGGGCAAGCTGTAGAA+GGG 0.582070 4_2:-1282675 Msa0582910:CDS
GCAATAAGTCCCGTTTGAAG+AGG 0.589598 4_2:+1280209 None:intergenic
ACAGGTACTGTACTTCAAGT+AGG 0.592569 4_2:-1280560 Msa0582910:CDS
GCTGTACCTTGACCAACTCC+AGG 0.593501 4_2:+1282697 None:intergenic
GAATTTGAAGAGGGTACTGT+AGG 0.593991 4_2:-1280482 Msa0582910:CDS
CGATTAATCAAGTGCAACAG+AGG 0.596922 4_2:-1280877 Msa0582910:CDS
CTTCTATTACGAAGACCACC+AGG 0.597315 4_2:-1279819 Msa0582910:CDS
ACCATCAATAGGTTTAGCTA+GGG 0.601516 4_2:+1280313 None:intergenic
ATCAGACCAGCTATTAATGT+GGG 0.604091 4_2:-1279585 Msa0582910:CDS
GAGTTACATTTACGTACGAT+CGG 0.617220 4_2:-1280797 Msa0582910:intron
GAATTAGTCGAATTTGAAGA+GGG 0.619600 4_2:-1280491 Msa0582910:CDS
GCTAAACCTATTGATGGTCG+AGG 0.620970 4_2:-1280308 Msa0582910:CDS
AAGGAAAGTAGAAACGGAAG+CGG 0.622485 4_2:-1281029 Msa0582910:CDS
AATCAGACCAGCTATTAATG+TGG 0.625394 4_2:-1279586 Msa0582910:CDS
GATTCCAGCATTGAATAGAT+CGG 0.626418 4_2:+1279605 None:intergenic
TCTATGATCCCTATAGGGCG+TGG 0.628110 4_2:-1280179 Msa0582910:CDS
CCAGCGAGAATTAATTATTG+GGG 0.636830 4_2:-1280156 Msa0582910:CDS
TCCAATAGAAGCAAGCCCGA+CGG 0.638086 4_2:+1282720 None:intergenic
ACAGAAGCAGCAGAAATCAG+TGG 0.640161 4_2:+1282760 None:intergenic
TTGGTCAAGGTACAGCTGCA+GGG 0.643472 4_2:-1282690 Msa0582910:CDS
GATTAATCAAGTGCAACAGA+GGG 0.644246 4_2:-1280876 Msa0582910:CDS
ACGCAAAATCAATTGGCAAG+AGG 0.645378 4_2:-1279426 Msa0582910:CDS
CGTTTGAAGAGGCTCATACA+CGG 0.655862 4_2:+1280220 None:intergenic
GAAGCAGAGGACAAAATAAG+GGG 0.658398 4_2:-1282637 Msa0582910:CDS
GATGGTTTGCTGATACAAGA+GGG 0.671964 4_2:-1280410 Msa0582910:CDS
GCTCAGATACCAGTAAGTGA+GGG 0.673181 4_2:-1280359 Msa0582910:CDS
TGATGGTTTGCTGATACAAG+AGG 0.676056 4_2:-1280411 Msa0582910:CDS
ACTGTACTTCAAGTAGGCGA+CGG 0.682410 4_2:-1280554 Msa0582910:CDS
GGATACGCTTCGCGACCTGG+TGG 0.699302 4_2:+1279804 None:intergenic
GATACAATTCTCAATCAACA+GGG 0.744742 4_2:-1280101 Msa0582910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAAAGATTAAACAAA+AGG + chr4_2:1279200-1279219 None:intergenic 10.0%
!! TCAATTCTAAATTAAATAAA+GGG + chr4_2:1279421-1279440 None:intergenic 10.0%
!! TTCAATTCTAAATTAAATAA+AGG + chr4_2:1279422-1279441 None:intergenic 10.0%
!! ACTAATTATGAATATAATAA+AGG + chr4_2:1282646-1282665 None:intergenic 10.0%
!! AATTCTAAATTAAATAAAGG+GGG + chr4_2:1279419-1279438 None:intergenic 15.0%
!! CAATTCTAAATTAAATAAAG+GGG + chr4_2:1279420-1279439 None:intergenic 15.0%
!! AATCAAAAAATCAAAAAACT+GGG - chr4_2:1279684-1279703 Msa0582910:CDS 15.0%
!!! TGTATTAATTTTTTTGGAAA+GGG - chr4_2:1279870-1279889 Msa0582910:CDS 15.0%
!! ATAAATTAATCAGAATTCTT+TGG - chr4_2:1280309-1280328 Msa0582910:CDS 15.0%
!! CAATACAAGATTAAAATATT+TGG + chr4_2:1280391-1280410 None:intergenic 15.0%
!!! CAAATATTTTAATCTTGTAT+TGG - chr4_2:1280389-1280408 Msa0582910:CDS 15.0%
!! TAATTCAATTTATACAACTT+TGG - chr4_2:1280778-1280797 Msa0582910:intron 15.0%
!! TTCAAATTAAGAAATATTCA+TGG - chr4_2:1281066-1281085 Msa0582910:CDS 15.0%
!!! TGTATTTACAATTTTTACTT+CGG + chr4_2:1281152-1281171 None:intergenic 15.0%
!! AAAAGATTAAACAAAAGGAT+TGG + chr4_2:1279195-1279214 None:intergenic 20.0%
!! ATAAATTGTAGGAGTTAAAT+CGG + chr4_2:1279334-1279353 None:intergenic 20.0%
!! TAGATTCTATATTCTCTAAT+TGG + chr4_2:1279522-1279541 None:intergenic 20.0%
!! GAATCAAAAAATCAAAAAAC+TGG - chr4_2:1279683-1279702 Msa0582910:CDS 20.0%
!!! TAGATTTGTTGCTAAAATAT+CGG + chr4_2:1279827-1279846 None:intergenic 20.0%
!!! GTGTATTAATTTTTTTGGAA+AGG - chr4_2:1279869-1279888 Msa0582910:CDS 20.0%
!! GTTTATTTCAAAGAATAGAT+TGG - chr4_2:1279907-1279926 Msa0582910:CDS 20.0%
!! ATTCTGATTAATTTATACGT+AGG + chr4_2:1280305-1280324 None:intergenic 20.0%
!! TACAAGATTAAAATATTTGG+AGG + chr4_2:1280388-1280407 None:intergenic 20.0%
!! GAAGTAAAAATTGTAAATAC+AGG - chr4_2:1281151-1281170 Msa0582910:CDS 20.0%
!! ATGTAAATAAAAAACATCTC+CGG + chr4_2:1281950-1281969 None:intergenic 20.0%
!! TGGTAAATTAAAATTGGAAT+TGG - chr4_2:1282224-1282243 Msa0582910:intron 20.0%
!! CAGATAATAACTATTTATAC+TGG - chr4_2:1282384-1282403 Msa0582910:intron 20.0%
!! GATATGATTTCGTTAAATTT+AGG + chr4_2:1282495-1282514 None:intergenic 20.0%
!! ATGGAAGCTTTAACTATTTA+TGG - chr4_2:1279140-1279159 Msa0582910:intron 25.0%
!! TGGAAGCTTTAACTATTTAT+GGG - chr4_2:1279141-1279160 Msa0582910:intron 25.0%
!!! AATACATATTGTTTTTTCCG+TGG - chr4_2:1279233-1279252 Msa0582910:intron 25.0%
! CCTACAATTTATTCTTCATT+CGG - chr4_2:1279342-1279361 Msa0582910:intron 25.0%
!! AAAATTAGTCTATCCATAAG+AGG - chr4_2:1279719-1279738 Msa0582910:intron 25.0%
! AATGAAGCAAAGAAAAGAAT+CGG + chr4_2:1279770-1279789 None:intergenic 25.0%
!!! GCTAGGTGTATTAATTTTTT+TGG - chr4_2:1279864-1279883 Msa0582910:CDS 25.0%
!! TATAATGAAAAAAGTGCAGT+TGG + chr4_2:1279939-1279958 None:intergenic 25.0%
! TTTCTACCACTATGTTAATA+CGG - chr4_2:1280153-1280172 Msa0582910:CDS 25.0%
! TTCTCTTTACGATGAAAAAT+AGG - chr4_2:1280227-1280246 Msa0582910:CDS 25.0%
! TTTGCTGACAATTATTTGTT+TGG - chr4_2:1280352-1280371 Msa0582910:CDS 25.0%
! TGTTTAGAAATAGAGAAAAG+AGG - chr4_2:1280427-1280446 Msa0582910:CDS 25.0%
! CTCATTCGATAATAAAGATA+GGG - chr4_2:1280455-1280474 Msa0582910:CDS 25.0%
! CATGAATCTTTCAATTCATT+TGG + chr4_2:1280511-1280530 None:intergenic 25.0%
! TGAATTGAAAGATTCATGTT+TGG - chr4_2:1280513-1280532 Msa0582910:intron 25.0%
! TTCAAAATTCAGAAGAACTA+CGG - chr4_2:1280636-1280655 Msa0582910:intron 25.0%
!! GATTCATTTTGAACAACAAA+GGG - chr4_2:1280829-1280848 Msa0582910:CDS 25.0%
! GTGCTAATATTGATATGTTT+GGG - chr4_2:1280954-1280973 Msa0582910:CDS 25.0%
! TGCTAATATTGATATGTTTG+GGG - chr4_2:1280955-1280974 Msa0582910:CDS 25.0%
! TCTACTAGAATATAGAGTAT+AGG - chr4_2:1281009-1281028 Msa0582910:intron 25.0%
!!! TGAATTTGATTCTTTTTCGA+AGG + chr4_2:1281050-1281069 None:intergenic 25.0%
!! AATTTGGAATCCAAAAATGT+TGG - chr4_2:1281280-1281299 Msa0582910:intron 25.0%
!! TAATACAACACCAACATTTT+TGG + chr4_2:1281293-1281312 None:intergenic 25.0%
!!! AAATGTTGGTGTTGTATTAA+TGG - chr4_2:1281294-1281313 Msa0582910:intron 25.0%
!!! AATGTTGGTGTTGTATTAAT+GGG - chr4_2:1281295-1281314 Msa0582910:intron 25.0%
! ATATGTGTTTATGTAGCTAT+TGG - chr4_2:1281661-1281680 Msa0582910:intron 25.0%
! TAACTACTTTACAAGAAAGA+GGG - chr4_2:1281713-1281732 Msa0582910:intron 25.0%
! TGTAAATAAAAAACATCTCC+GGG + chr4_2:1281949-1281968 None:intergenic 25.0%
!! TTATTTACATTCTCGTCTTT+TGG - chr4_2:1281960-1281979 Msa0582910:intron 25.0%
! TAACTGAGAACTTAATTTAG+CGG + chr4_2:1281992-1282011 None:intergenic 25.0%
!! GTAATGGAAATTACATTAGT+AGG + chr4_2:1282081-1282100 None:intergenic 25.0%
! AATGTAATTTCCATTACAGA+TGG - chr4_2:1282084-1282103 Msa0582910:intron 25.0%
! TGATTCATTAGAAATTGATC+AGG - chr4_2:1282422-1282441 Msa0582910:intron 25.0%
! TAAATTTCTCGTTGAGTTAA+GGG - chr4_2:1282449-1282468 Msa0582910:intron 25.0%
!!! ATTACTTAGTCTGGCTTTTA+TGG - chr4_2:1279121-1279140 Msa0582910:intron 30.0%
CCGAATGAAGAATAAATTGT+AGG + chr4_2:1279345-1279364 None:intergenic 30.0%
AACTAGTATCTACTTCTAAG+AGG - chr4_2:1279472-1279491 Msa0582910:CDS 30.0%
!! TAAGAGGTATCGTTCTTATA+GGG - chr4_2:1279488-1279507 Msa0582910:CDS 30.0%
! CTTTTCTTTGCTTCATTTAC+TGG - chr4_2:1279773-1279792 Msa0582910:CDS 30.0%
ATAAATCTAAGTGTAGTGCT+AGG - chr4_2:1279847-1279866 Msa0582910:CDS 30.0%
! TCTCTATCAACCAAGAATTT+TGG - chr4_2:1280075-1280094 Msa0582910:CDS 30.0%
CAATTTCCGTATTAACATAG+TGG + chr4_2:1280162-1280181 None:intergenic 30.0%
CACTATGTTAATACGGAAAT+TGG - chr4_2:1280160-1280179 Msa0582910:CDS 30.0%
CGATGAAAAATAGGAAAAAC+AGG - chr4_2:1280236-1280255 Msa0582910:intron 30.0%
TCAATTCCGCATTGTATAAA+AGG + chr4_2:1280279-1280298 None:intergenic 30.0%
AGAAATAGAGAAAAGAGGAT+AGG - chr4_2:1280432-1280451 Msa0582910:CDS 30.0%
GCTCATTCGATAATAAAGAT+AGG - chr4_2:1280454-1280473 Msa0582910:CDS 30.0%
AGATAGGGAAATTTCCTATA+CGG - chr4_2:1280470-1280489 Msa0582910:CDS 30.0%
TGAAAGATTCATGTTTGGTT+CGG - chr4_2:1280518-1280537 Msa0582910:intron 30.0%
TCAAAATTCAGAAGAACTAC+GGG - chr4_2:1280637-1280656 Msa0582910:intron 30.0%
! CAATTTTTCTCGTTCTATCT+CGG + chr4_2:1280750-1280769 None:intergenic 30.0%
! CGATTCATTTTGAACAACAA+AGG - chr4_2:1280828-1280847 Msa0582910:CDS 30.0%
! GTTTTACAACAAGCATTACA+AGG - chr4_2:1280875-1280894 Msa0582910:CDS 30.0%
GGTGCTAATATTGATATGTT+TGG - chr4_2:1280953-1280972 Msa0582910:CDS 30.0%
TATATTGCTCAATACGTTCA+CGG + chr4_2:1281126-1281145 None:intergenic 30.0%
! TTATGGTCTTGATGAAGTAA+TGG - chr4_2:1281210-1281229 Msa0582910:intron 30.0%
TGAATTAGTCGAATTTGAAG+AGG - chr4_2:1281237-1281256 Msa0582910:intron 30.0%
GAATTAGTCGAATTTGAAGA+GGG - chr4_2:1281238-1281257 Msa0582910:intron 30.0%
! ATTGATTCTATGATCCCTAT+AGG - chr4_2:1281544-1281563 Msa0582910:intron 30.0%
TTGATTCTATGATCCCTATA+GGG - chr4_2:1281545-1281564 Msa0582910:intron 30.0%
AGATACAATTCTCAATCAAC+AGG - chr4_2:1281627-1281646 Msa0582910:intron 30.0%
GATACAATTCTCAATCAACA+GGG - chr4_2:1281628-1281647 Msa0582910:intron 30.0%
GTAACTACTTTACAAGAAAG+AGG - chr4_2:1281712-1281731 Msa0582910:intron 30.0%
AACTACTTTACAAGAAAGAG+GGG - chr4_2:1281714-1281733 Msa0582910:intron 30.0%
AATGGAGTACACTATTATAG+TGG - chr4_2:1281738-1281757 Msa0582910:intron 30.0%
TTCGTAATAGAAGAGACATT+TGG + chr4_2:1281903-1281922 None:intergenic 30.0%
GCTAAATTAAGTTCTCAGTT+AGG - chr4_2:1281991-1282010 Msa0582910:intron 30.0%
AAATATTTGGCCATCTGTAA+TGG + chr4_2:1282097-1282116 None:intergenic 30.0%
GATCGGCAGATAAAAATATT+TGG + chr4_2:1282110-1282129 None:intergenic 30.0%
TCAAATTAAAGCCATGAAAC+AGG - chr4_2:1282197-1282216 Msa0582910:intron 30.0%
GGTAGCTGGTAAATTAAAAT+TGG - chr4_2:1282218-1282237 Msa0582910:intron 30.0%
TAAAGCTACGCAAAATCAAT+TGG - chr4_2:1282296-1282315 Msa0582910:intron 30.0%
ACTATTTATACTGGAACGAA+TGG - chr4_2:1282393-1282412 Msa0582910:intron 30.0%
GTAAATTTCTCGTTGAGTTA+AGG - chr4_2:1282448-1282467 Msa0582910:intron 30.0%
GGGTACTTTATTACTTAGTC+TGG - chr4_2:1279112-1279131 Msa0582910:intron 35.0%
! AGCTTTAACTATTTATGGGC+TGG - chr4_2:1279145-1279164 Msa0582910:intron 35.0%
CATTGGACTAAATAAAGGGA+CGG + chr4_2:1279392-1279411 None:intergenic 35.0%
CGCTCATTGGACTAAATAAA+GGG + chr4_2:1279396-1279415 None:intergenic 35.0%
!! CTAAGAGGTATCGTTCTTAT+AGG - chr4_2:1279487-1279506 Msa0582910:CDS 35.0%
! ATGAAAAAAGTGCAGTTGGT+TGG + chr4_2:1279935-1279954 None:intergenic 35.0%
TTTAGTAAGAAGTCATTCGC+CGG + chr4_2:1279982-1280001 None:intergenic 35.0%
! TGGTAATGCTCCAAAATTCT+TGG + chr4_2:1280088-1280107 None:intergenic 35.0%
!!! AGAATTTTGGAGCATTACCA+TGG - chr4_2:1280088-1280107 Msa0582910:CDS 35.0%
!! AAACTGGTTAGCTTTAACCA+TGG + chr4_2:1280108-1280127 None:intergenic 35.0%
ATTGCGTCTAAACTTCAAAC+TGG + chr4_2:1280124-1280143 None:intergenic 35.0%
ATTCCGCATTGTATAAAAGG+AGG + chr4_2:1280276-1280295 None:intergenic 35.0%
! GAAAGATTCATGTTTGGTTC+GGG - chr4_2:1280519-1280538 Msa0582910:intron 35.0%
GATTAATCAAGTGCAACAGA+GGG - chr4_2:1280853-1280872 Msa0582910:CDS 35.0%
GAGTTACATTTACGTACGAT+CGG - chr4_2:1280932-1280951 Msa0582910:CDS 35.0%
ACTAATTTCATCTGCACGAA+TGG + chr4_2:1281095-1281114 None:intergenic 35.0%
! TGTAGGCATTGCTTTGAATT+TGG - chr4_2:1281264-1281283 Msa0582910:intron 35.0%
ACCATCAATAGGTTTAGCTA+GGG + chr4_2:1281419-1281438 None:intergenic 35.0%
AAATTTCAGCTTCGGAATCT+CGG - chr4_2:1281446-1281465 Msa0582910:intron 35.0%
GCCAGCGAGAATTAATTATT+GGG - chr4_2:1281572-1281591 Msa0582910:intron 35.0%
CCAGCGAGAATTAATTATTG+GGG - chr4_2:1281573-1281592 Msa0582910:intron 35.0%
TGATTAAAGTGTGACGTTCA+CGG + chr4_2:1281843-1281862 None:intergenic 35.0%
TTAAGTTCTCAGTTAGGTGA+AGG - chr4_2:1281997-1282016 Msa0582910:intron 35.0%
! GATTCCAGCATTGAATAGAT+CGG + chr4_2:1282127-1282146 None:intergenic 35.0%
AATCAGACCAGCTATTAATG+TGG - chr4_2:1282143-1282162 Msa0582910:intron 35.0%
ATCAGACCAGCTATTAATGT+GGG - chr4_2:1282144-1282163 Msa0582910:intron 35.0%
GAAATACCCACATTAATAGC+TGG + chr4_2:1282153-1282172 None:intergenic 35.0%
CTGAATAGCTTCCTTCAAAA+GGG + chr4_2:1282550-1282569 None:intergenic 35.0%
! GATGGAACTCTTTTTACTTC+AGG - chr4_2:1282575-1282594 Msa0582910:CDS 35.0%
!!! CTTATTTTGTCCTCTGCTTC+CGG + chr4_2:1279092-1279111 None:intergenic 40.0%
GGAAGCAGAGGACAAAATAA+GGG - chr4_2:1279091-1279110 Msa0582910:intron 40.0%
GAAGCAGAGGACAAAATAAG+GGG - chr4_2:1279092-1279111 Msa0582910:intron 40.0%
ATAGCAGCAATGAAAGTCCA+CGG + chr4_2:1279253-1279272 None:intergenic 40.0%
CTAAATAAAGGGACGGAAGA+AGG + chr4_2:1279385-1279404 None:intergenic 40.0%
GCGCTCATTGGACTAAATAA+AGG + chr4_2:1279397-1279416 None:intergenic 40.0%
TATGATCGCATCTCCTCTTA+TGG + chr4_2:1279735-1279754 None:intergenic 40.0%
CTAGAAAAACGTGCATGATC+CGG - chr4_2:1279960-1279979 Msa0582910:intron 40.0%
CAATGAATCGCGAAATGCTA+TGG + chr4_2:1280039-1280058 None:intergenic 40.0%
CATAGCATTTCGCGATTCAT+TGG - chr4_2:1280037-1280056 Msa0582910:intron 40.0%
! ACGCCTCCTTTTATACAATG+CGG - chr4_2:1280270-1280289 Msa0582910:intron 40.0%
TCTCACACTCAATTCCGTAT+AGG + chr4_2:1280487-1280506 None:intergenic 40.0%
CGTTTCTACTTTCCTTAAGC+GGG + chr4_2:1280696-1280715 None:intergenic 40.0%
CCGTTTCTACTTTCCTTAAG+CGG + chr4_2:1280697-1280716 None:intergenic 40.0%
CCGCTTAAGGAAAGTAGAAA+CGG - chr4_2:1280694-1280713 Msa0582910:intron 40.0%
AAGGAAAGTAGAAACGGAAG+CGG - chr4_2:1280700-1280719 Msa0582910:intron 40.0%
CGATTAATCAAGTGCAACAG+AGG - chr4_2:1280852-1280871 Msa0582910:CDS 40.0%
! ACAGGTACTGTACTTCAAGT+AGG - chr4_2:1281169-1281188 Msa0582910:CDS 40.0%
!! GAATTTGAAGAGGGTACTGT+AGG - chr4_2:1281247-1281266 Msa0582910:intron 40.0%
! GGTGTTGTATTAATGGGTGA+TGG - chr4_2:1281301-1281320 Msa0582910:intron 40.0%
!! TGATGGTTTGCTGATACAAG+AGG - chr4_2:1281318-1281337 Msa0582910:intron 40.0%
!! GATGGTTTGCTGATACAAGA+GGG - chr4_2:1281319-1281338 Msa0582910:intron 40.0%
ACCAGTAAGTGAGGGTTATT+TGG - chr4_2:1281378-1281397 Msa0582910:intron 40.0%
CCAGTAAGTGAGGGTTATTT+GGG - chr4_2:1281379-1281398 Msa0582910:intron 40.0%
GACCATCAATAGGTTTAGCT+AGG + chr4_2:1281420-1281439 None:intergenic 40.0%
ATTTCTCCTCGACCATCAAT+AGG + chr4_2:1281430-1281449 None:intergenic 40.0%
TCGAGGAGAAATTTCAGCTT+CGG - chr4_2:1281438-1281457 Msa0582910:intron 40.0%
GAACGTCTGGAAATAATACC+GGG + chr4_2:1281490-1281509 None:intergenic 40.0%
GGAACGTCTGGAAATAATAC+CGG + chr4_2:1281491-1281510 None:intergenic 40.0%
GGCCAGCGAGAATTAATTAT+TGG - chr4_2:1281571-1281590 Msa0582910:intron 40.0%
CCCCAATAATTAATTCTCGC+TGG + chr4_2:1281576-1281595 None:intergenic 40.0%
ATTATTGGGGACAGACAAAC+AGG - chr4_2:1281586-1281605 Msa0582910:intron 40.0%
!! TGGTCAAAAAGCATCTTCTG+TGG - chr4_2:1281681-1281700 Msa0582910:intron 40.0%
TTTACAAGAAAGAGGGGCAA+TGG - chr4_2:1281720-1281739 Msa0582910:intron 40.0%
AGCTGAAACATCTCCTGATT+GGG + chr4_2:1282052-1282071 None:intergenic 40.0%
AAGCTGAAACATCTCCTGAT+TGG + chr4_2:1282053-1282072 None:intergenic 40.0%
TTTACCAGCTACCTGTTTCA+TGG + chr4_2:1282211-1282230 None:intergenic 40.0%
ACGCAAAATCAATTGGCAAG+AGG - chr4_2:1282303-1282322 Msa0582910:intron 40.0%
TCTTCTACCAAGACATTCAC+TGG - chr4_2:1282513-1282532 Msa0582910:intron 40.0%
CTTCTACCAAGACATTCACT+GGG - chr4_2:1282514-1282533 Msa0582910:intron 40.0%
TTCTACCAAGACATTCACTG+GGG - chr4_2:1282515-1282534 Msa0582910:intron 40.0%
CCTGAATAGCTTCCTTCAAA+AGG + chr4_2:1282551-1282570 None:intergenic 40.0%
!! CCTTTTGAAGGAAGCTATTC+AGG - chr4_2:1282548-1282567 Msa0582910:intron 40.0%
ACAGAAGCAGCAGAAATCAG+TGG + chr4_2:1278972-1278991 None:intergenic 45.0%
CGGAAGCAGAGGACAAAATA+AGG - chr4_2:1279090-1279109 Msa0582910:intron 45.0%
!! TAAATAAAGGGGGCGCTCAT+TGG + chr4_2:1279409-1279428 None:intergenic 45.0%
GGTATCAAACCCGAAACTTC+CGG + chr4_2:1279806-1279825 None:intergenic 45.0%
AAGTAGAAACGGAAGCGGAT+CGG - chr4_2:1280705-1280724 Msa0582910:intron 45.0%
ACAAGCATTACAAGGAGCTC+TGG - chr4_2:1280883-1280902 Msa0582910:CDS 45.0%
CAAGCATTACAAGGAGCTCT+GGG - chr4_2:1280884-1280903 Msa0582910:CDS 45.0%
ACTGTACTTCAAGTAGGCGA+CGG - chr4_2:1281175-1281194 Msa0582910:CDS 45.0%
GACGGCATTGCTCGTATTTA+TGG - chr4_2:1281193-1281212 Msa0582910:intron 45.0%
GGTCTTGATGAAGTAATGGC+AGG - chr4_2:1281214-1281233 Msa0582910:intron 45.0%
GCTGATACAAGAGGGAAGTT+CGG - chr4_2:1281327-1281346 Msa0582910:intron 45.0%
GGAAGTTCGGTAAAAGCAAC+AGG - chr4_2:1281340-1281359 Msa0582910:intron 45.0%
TGCTCAGATACCAGTAAGTG+AGG - chr4_2:1281369-1281388 Msa0582910:intron 45.0%
GCTCAGATACCAGTAAGTGA+GGG - chr4_2:1281370-1281389 Msa0582910:intron 45.0%
CCCAAATAACCCTCACTTAC+TGG + chr4_2:1281382-1281401 None:intergenic 45.0%
GCCCTAGCTAAACCTATTGA+TGG - chr4_2:1281415-1281434 Msa0582910:intron 45.0%
! GCTAAACCTATTGATGGTCG+AGG - chr4_2:1281421-1281440 Msa0582910:intron 45.0%
TCTGGAAATAATACCGGGAG+CGG + chr4_2:1281485-1281504 None:intergenic 45.0%
CGTTTGAAGAGGCTCATACA+CGG + chr4_2:1281512-1281531 None:intergenic 45.0%
CGTGTATGAGCCTCTTCAAA+CGG - chr4_2:1281510-1281529 Msa0582910:intron 45.0%
GTGTATGAGCCTCTTCAAAC+GGG - chr4_2:1281511-1281530 Msa0582910:intron 45.0%
GCAATAAGTCCCGTTTGAAG+AGG + chr4_2:1281523-1281542 None:intergenic 45.0%
!! GCGAGGTATTGTAATGTAGC+TGG + chr4_2:1281781-1281800 None:intergenic 45.0%
CAATACCTCGCTCCTTATAC+AGG - chr4_2:1281790-1281809 Msa0582910:intron 45.0%
TAAGCCTGTGCTTGTTTGGA+GGG + chr4_2:1281877-1281896 None:intergenic 45.0%
ATAAGCCTGTGCTTGTTTGG+AGG + chr4_2:1281878-1281897 None:intergenic 45.0%
CTTCTATTACGAAGACCACC+AGG - chr4_2:1281910-1281929 Msa0582910:intron 45.0%
CCTGATTGGGTCTCAACTAT+TGG + chr4_2:1282039-1282058 None:intergenic 45.0%
CCAATAGTTGAGACCCAATC+AGG - chr4_2:1282036-1282055 Msa0582910:intron 45.0%
TCTGCCGATCTATTCAATGC+TGG - chr4_2:1282120-1282139 Msa0582910:intron 45.0%
GGTATTTCCGTTTCCAGAGT+TGG - chr4_2:1282165-1282184 Msa0582910:intron 45.0%
TTCCGTTTCCAGAGTTGGAT+CGG - chr4_2:1282170-1282189 Msa0582910:intron 45.0%
AAAGCCATGAAACAGGTAGC+TGG - chr4_2:1282204-1282223 Msa0582910:intron 45.0%
ATCTGTTCTTCCACAGTGAG+AGG + chr4_2:1282369-1282388 None:intergenic 45.0%
GGAAGCTATTCAGGAACAGA+TGG - chr4_2:1282557-1282576 Msa0582910:CDS 45.0%
CTGCTTCTGTTATCGCTGCT+GGG - chr4_2:1278982-1279001 Msa0582910:intron 50.0%
TTCTGTTATCGCTGCTGGGT+TGG - chr4_2:1278986-1279005 Msa0582910:intron 50.0%
TCCAATAGAAGCAAGCCCGA+CGG + chr4_2:1279012-1279031 None:intergenic 50.0%
GCTTCTATTGGACCTGGAGT+TGG - chr4_2:1279020-1279039 Msa0582910:intron 50.0%
! ATTGGACCTGGAGTTGGTCA+AGG - chr4_2:1279026-1279045 Msa0582910:intron 50.0%
TTGGTCAAGGTACAGCTGCA+GGG - chr4_2:1279039-1279058 Msa0582910:intron 50.0%
TTCATTTACTGGCCATCCGC+CGG - chr4_2:1279784-1279803 Msa0582910:CDS 50.0%
ATCAAACCCGAAACTTCCGG+CGG + chr4_2:1279803-1279822 None:intergenic 50.0%
GGCTTTCTCCAGCTGTTCAA+CGG + chr4_2:1280669-1280688 None:intergenic 50.0%
TTGAACAGCTGGAGAAAGCC+CGG - chr4_2:1280669-1280688 Msa0582910:intron 50.0%
TTAATCGAATCTCCCGCTCC+CGG - chr4_2:1281469-1281488 Msa0582910:intron 50.0%
CTGGAAATAATACCGGGAGC+GGG + chr4_2:1281484-1281503 None:intergenic 50.0%
TCTATGATCCCTATAGGGCG+TGG - chr4_2:1281550-1281569 Msa0582910:intron 50.0%
AGCATCTTCTGTGGCTCAAG+TGG - chr4_2:1281690-1281709 Msa0582910:intron 50.0%
TCCTTATACAGGTGCAGCTC+TGG - chr4_2:1281801-1281820 Msa0582910:intron 50.0%
GCGATAAGCCTGTGCTTGTT+TGG + chr4_2:1281881-1281900 None:intergenic 50.0%
CACAGTGAGAGGAGCTGATT+GGG + chr4_2:1282358-1282377 None:intergenic 50.0%
TGCTTCCCCAGTGAATGTCT+TGG + chr4_2:1282523-1282542 None:intergenic 50.0%
! GGAAGCAGAAGCCCTTTTGA+AGG - chr4_2:1282536-1282555 Msa0582910:intron 50.0%
GCTGCTTCTGTTATCGCTGC+TGG - chr4_2:1278981-1279000 Msa0582910:intron 55.0%
! GGGCTTGCTTCTATTGGACC+TGG - chr4_2:1279014-1279033 Msa0582910:intron 55.0%
GCTGTACCTTGACCAACTCC+AGG + chr4_2:1279035-1279054 None:intergenic 55.0%
GTTGGTCAAGGTACAGCTGC+AGG - chr4_2:1279038-1279057 Msa0582910:intron 55.0%
CTGCAGGGCAAGCTGTAGAA+GGG - chr4_2:1279054-1279073 Msa0582910:intron 55.0%
AGAAGGGATTGCGCGACAAC+CGG - chr4_2:1279070-1279089 Msa0582910:intron 55.0%
TGAACAGCTGGAGAAAGCCC+GGG - chr4_2:1280670-1280689 Msa0582910:intron 55.0%
TACTTTCCTTAAGCGGGCCC+GGG + chr4_2:1280690-1280709 None:intergenic 55.0%
CTACTTTCCTTAAGCGGGCC+CGG + chr4_2:1280691-1280710 None:intergenic 55.0%
! GCGGATCGGTTTCGAGTGAA+TGG - chr4_2:1280719-1280738 Msa0582910:intron 55.0%
AGGCTCATACACGGAACGTC+TGG + chr4_2:1281503-1281522 None:intergenic 55.0%
CTGCACCTGTATAAGGAGCG+AGG + chr4_2:1281798-1281817 None:intergenic 55.0%
GCCAGAGCTGCACCTGTATA+AGG + chr4_2:1281805-1281824 None:intergenic 55.0%
CGATCCCTCCAAACAAGCAC+AGG - chr4_2:1281870-1281889 Msa0582910:intron 55.0%
! CGCCGATCCAACTCTGGAAA+CGG + chr4_2:1282175-1282194 None:intergenic 55.0%
CGTTTCCAGAGTTGGATCGG+CGG - chr4_2:1282173-1282192 Msa0582910:intron 55.0%
CCACAGTGAGAGGAGCTGAT+TGG + chr4_2:1282359-1282378 None:intergenic 55.0%
CCAATCAGCTCCTCTCACTG+TGG - chr4_2:1282356-1282375 Msa0582910:intron 55.0%
! GCCGTCGGGCTTGCTTCTAT+TGG - chr4_2:1279008-1279027 Msa0582910:intron 60.0%
GCTGCAGGGCAAGCTGTAGA+AGG - chr4_2:1279053-1279072 Msa0582910:intron 60.0%
TGGCCATCCGCCGGAAGTTT+CGG - chr4_2:1279793-1279812 Msa0582910:CDS 60.0%
AACCCGAAACTTCCGGCGGA+TGG + chr4_2:1279799-1279818 None:intergenic 60.0%
GGAAGCAGCCGTTGAACAGC+TGG - chr4_2:1280658-1280677 Msa0582910:intron 60.0%
TTGAGCCGCCGATCCAACTC+TGG + chr4_2:1282181-1282200 None:intergenic 60.0%
!! ATCGCTGCTGGGTTGGCCGT+CGG - chr4_2:1278993-1279012 Msa0582910:intron 65.0%
TGCGCGACAACCGGAAGCAG+AGG - chr4_2:1279079-1279098 Msa0582910:intron 65.0%
GGCCATCCGCCGGAAGTTTC+GGG - chr4_2:1279794-1279813 Msa0582910:CDS 65.0%
AGAAAGCCCGGGCCCGCTTA+AGG - chr4_2:1280681-1280700 Msa0582910:intron 65.0%
CTCGCTGGCCACGCCCTATA+GGG + chr4_2:1281561-1281580 None:intergenic 65.0%
TCTCGCTGGCCACGCCCTAT+AGG + chr4_2:1281562-1281581 None:intergenic 65.0%
GGATACGCTTCGCGACCTGG+TGG + chr4_2:1281928-1281947 None:intergenic 65.0%
CCAGGTCGCGAAGCGTATCC+CGG - chr4_2:1281928-1281947 Msa0582910:intron 65.0%
!! TCGCTGCTGGGTTGGCCGTC+GGG - chr4_2:1278994-1279013 Msa0582910:intron 70.0%
CCGGGATACGCTTCGCGACC+TGG + chr4_2:1281931-1281950 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 1278963 1282788 1278963 ID=Msa0582910;Name=Msa0582910
chr4_2 mRNA 1278963 1282788 1278963 ID=Msa0582910-mRNA-1;Parent=Msa0582910;Name=Msa0582910-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0|0.9|0|0|10|0|556
chr4_2 exon 1282549 1282788 1282549 ID=Msa0582910-mRNA-1:exon:362;Parent=Msa0582910-mRNA-1
chr4_2 exon 1281011 1281197 1281011 ID=Msa0582910-mRNA-1:exon:361;Parent=Msa0582910-mRNA-1
chr4_2 exon 1280798 1280995 1280798 ID=Msa0582910-mRNA-1:exon:360;Parent=Msa0582910-mRNA-1
chr4_2 exon 1280546 1280647 1280546 ID=Msa0582910-mRNA-1:exon:359;Parent=Msa0582910-mRNA-1
chr4_2 exon 1280284 1280515 1280284 ID=Msa0582910-mRNA-1:exon:358;Parent=Msa0582910-mRNA-1
chr4_2 exon 1280069 1280247 1280069 ID=Msa0582910-mRNA-1:exon:357;Parent=Msa0582910-mRNA-1
chr4_2 exon 1279739 1279939 1279739 ID=Msa0582910-mRNA-1:exon:356;Parent=Msa0582910-mRNA-1
chr4_2 exon 1279569 1279732 1279569 ID=Msa0582910-mRNA-1:exon:355;Parent=Msa0582910-mRNA-1
chr4_2 exon 1279377 1279532 1279377 ID=Msa0582910-mRNA-1:exon:354;Parent=Msa0582910-mRNA-1
chr4_2 exon 1278963 1278974 1278963 ID=Msa0582910-mRNA-1:exon:353;Parent=Msa0582910-mRNA-1
chr4_2 CDS 1282549 1282788 1282549 ID=Msa0582910-mRNA-1:cds;Parent=Msa0582910-mRNA-1
chr4_2 CDS 1281011 1281197 1281011 ID=Msa0582910-mRNA-1:cds;Parent=Msa0582910-mRNA-1
chr4_2 CDS 1280798 1280995 1280798 ID=Msa0582910-mRNA-1:cds;Parent=Msa0582910-mRNA-1
chr4_2 CDS 1280546 1280647 1280546 ID=Msa0582910-mRNA-1:cds;Parent=Msa0582910-mRNA-1
chr4_2 CDS 1280284 1280515 1280284 ID=Msa0582910-mRNA-1:cds;Parent=Msa0582910-mRNA-1
chr4_2 CDS 1280069 1280247 1280069 ID=Msa0582910-mRNA-1:cds;Parent=Msa0582910-mRNA-1
chr4_2 CDS 1279739 1279939 1279739 ID=Msa0582910-mRNA-1:cds;Parent=Msa0582910-mRNA-1
chr4_2 CDS 1279569 1279732 1279569 ID=Msa0582910-mRNA-1:cds;Parent=Msa0582910-mRNA-1
chr4_2 CDS 1279377 1279532 1279377 ID=Msa0582910-mRNA-1:cds;Parent=Msa0582910-mRNA-1
chr4_2 CDS 1278963 1278974 1278963 ID=Msa0582910-mRNA-1:cds;Parent=Msa0582910-mRNA-1
Gene Sequence

>Msa0582910

ATGGATCCACTGATTTCTGCTGCTTCTGTTATCGCTGCTGGGTTGGCCGTCGGGCTTGCTTCTATTGGACCTGGAGTTGGTCAAGGTACAGCTGCAGGGCAAGCTGTAGAAGGGATTGCGCGACAACCGGAAGCAGAGGACAAAATAAGGGGTACTTTATTACTTAGTCTGGCTTTTATGGAAGCTTTAACTATTTATGGGCTGGTTGTAGCATTAGCACTTTTATTTGCCAATCCTTTTACATTTTTAAATAAATGCAAAGAGAATCTACTTTCATTAAGTGATTTATTAGATAATCGAAAACAGAGAATCTTGAGAACTATTCAAAATTCAGAAGAACTACGGGAAGCAGCCGTTGAACAGCTGGAGAAAGCCCGGGCCCGCTTAAGGAAAGTAGAAACGGAAGCGGATCGGTTTCGAGTGAATGAACGAGAAAAATTGAATTTAATTAATTCAATTTATACAACTTTGGAACAATTCGAAAATTACAAAAATGAAACGATTCATTTTGAACAACAAAGGGCGATTAATCAAGTGCAACAGAGGGTTTTACAACAAGCATTACAAGGAGCTCTGGGAACTCTGAATAGTTGCTTAAACAACGAGTTACATTTACGTACGATCGATGAAATTAGTAAAATTATCCGTGAACGTATTGAGCAATATAATACCGAAGTAAAAATTGTAAATACAGGTACTGTACTTCAAGTAGGCGACGGCATTGCTCGTGAATTAGTCGAATTTGAAGAGGGTACTGTAGGCATTGCTTTGAATTTGGAATCCAAAAATGTTGGTGTTGTATTAATGGGTGATGGTTTGCTGATACAAGAGGGAAGTTCGGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGGTTATTTGGGTCGTGTTGTAAATGCCCTAGCTAAACCTATTGATGGTCGAGGAGAAATTTCAGCTTCGGAATCTCGACGTTCCGTGTATGAGCCTCTTCAAACGGGACTTATTGCTATTGATTCTATGATCCCTATAGGGCGTGGCCAGCGAGAATTAATTATTGGGGACAGACAAACAGGTAAAACAGCAGTAGCAACAGATACAATTCTCAATCAACAGGGACAAAATGTAATATGTGTTTATGTAGCTATTGGTGCAGCTCTGGCTGAATATTTTATGTACCGTGAACGTCACACTTTAATCATTTATGACGATCCCTCCAAACAAGCACAGGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCACCAGGTCGCGAAGCGTATCCCGGAGATGTTTTTTATTTACATTCTCGTCTTTTGGAAAGAGCCGCTAAATTAAGTTCTCAGTTAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCAGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTTTTATCTGCCGATCTATTCAATGCTGGAATCAGACCAGCTATTAATGTGGGTATTTCCGTTTCCAGAGTAGCTGGTAAATTAAAATTGGAATTGGCACAATTCGCAGAATTAGAAGCTTTTGCACAATTCGCTTCTGATCTCGATAAAGCTACGCAAAATCAATTGGCAAGAGGTCAACGATTGCGCGAGTTGCTTAAACAATCCCAATCAGCTCCTCTCACTATACGAATATAA

Protein sequence

>Msa0582910

MDPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEDKIRGTLLLSLAFMEALTIYGLVVALALLFANPFTFLNKCKENLLSLSDLLDNRKQRILRTIQNSEELREAAVEQLEKARARLRKVETEADRFRVNEREKLNLINSIYTTLEQFENYKNETIHFEQQRAINQVQQRVLQQALQGALGTLNSCLNNELHLRTIDEISKIIRERIEQYNTEVKIVNTGTVLQVGDGIARELVEFEEGTVGIALNLESKNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEGYLGRVVNALAKPIDGRGEISASESRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTIRI*