Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908660 | RYR53088.1 | 85.308 | 211 | 23 | 1 | 16 | 218 | 135 | 345 | 1.90e-123 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908660 | sp|Q9B1A1|RR7_LOTJA | 89.189 | 148 | 8 | 1 | 14 | 153 | 7 | 154 | 2.68e-91 | 267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095190 | Msa0908660 | 0.808033 | 3.778073e-50 | -8.615850e-47 |
| Msa0604740 | Msa0908660 | 0.808011 | 3.819488e-50 | -8.615850e-47 |
| Msa0727020 | Msa0908660 | 0.807169 | 5.762713e-50 | -8.615850e-47 |
| Msa0139800 | Msa0908660 | 0.811839 | 5.728299e-51 | -8.615850e-47 |
| Msa0202640 | Msa0908660 | 0.819366 | 1.206425e-52 | -8.615850e-47 |
| Msa0370210 | Msa0908660 | 0.826248 | 3.010599e-54 | -8.615850e-47 |
| Msa0398630 | Msa0908660 | 0.802043 | 6.766137e-49 | -8.615850e-47 |
| Msa0405420 | Msa0908660 | 0.836843 | 7.378148e-57 | -8.615850e-47 |
| Msa0405430 | Msa0908660 | 0.861581 | 9.275787e-64 | -8.615850e-47 |
| Msa0405440 | Msa0908660 | 0.834095 | 3.654732e-56 | -8.615850e-47 |
| Msa0405510 | Msa0908660 | 0.853816 | 1.860685e-61 | -8.615850e-47 |
| Msa0405520 | Msa0908660 | 0.850241 | 1.929098e-60 | -8.615850e-47 |
| Msa0405530 | Msa0908660 | 0.829111 | 6.181101e-55 | -8.615850e-47 |
| Msa0263770 | Msa0908660 | 0.820664 | 6.085094e-53 | -8.615850e-47 |
| Msa0268170 | Msa0908660 | 0.818752 | 1.663346e-52 | -8.615850e-47 |
| Msa0268250 | Msa0908660 | 0.854926 | 8.886268e-62 | -8.615850e-47 |
| Msa0268260 | Msa0908660 | 0.919139 | 6.533725e-87 | -8.615850e-47 |
| Msa0268270 | Msa0908660 | 0.858392 | 8.501869e-63 | -8.615850e-47 |
| Msa0268300 | Msa0908660 | 0.880923 | 3.678462e-70 | -8.615850e-47 |
| Msa0268310 | Msa0908660 | 0.880317 | 6.065528e-70 | -8.615850e-47 |
| Msa0268390 | Msa0908660 | 0.829328 | 5.474452e-55 | -8.615850e-47 |
| Msa0268400 | Msa0908660 | 0.827573 | 1.451680e-54 | -8.615850e-47 |
| Msa0268410 | Msa0908660 | 0.839529 | 1.500747e-57 | -8.615850e-47 |
| Msa0268550 | Msa0908660 | 0.837499 | 5.014354e-57 | -8.615850e-47 |
| Msa0268560 | Msa0908660 | 0.848041 | 7.890861e-60 | -8.615850e-47 |
| Msa0268570 | Msa0908660 | 0.802982 | 4.332051e-49 | -8.615850e-47 |
| Msa0268580 | Msa0908660 | 0.833791 | 4.352255e-56 | -8.615850e-47 |
| Msa0268630 | Msa0908660 | 0.831771 | 1.382096e-55 | -8.615850e-47 |
| Msa0268640 | Msa0908660 | 0.824889 | 6.320829e-54 | -8.615850e-47 |
| Msa0268740 | Msa0908660 | 0.846384 | 2.246322e-59 | -8.615850e-47 |
| Msa0268750 | Msa0908660 | 0.815571 | 8.635489e-52 | -8.615850e-47 |
| Msa0268760 | Msa0908660 | 0.830340 | 3.103256e-55 | -8.615850e-47 |
| Msa0268830 | Msa0908660 | 0.841569 | 4.387605e-58 | -8.615850e-47 |
| Msa0268840 | Msa0908660 | 0.821210 | 4.556639e-53 | -8.615850e-47 |
| Msa0268940 | Msa0908660 | 0.819722 | 1.000604e-52 | -8.615850e-47 |
| Msa0268950 | Msa0908660 | 0.840864 | 6.723729e-58 | -8.615850e-47 |
| Msa0268960 | Msa0908660 | 0.828207 | 1.022164e-54 | -8.615850e-47 |
| Msa0269040 | Msa0908660 | 0.841973 | 3.432960e-58 | -8.615850e-47 |
| Msa0269050 | Msa0908660 | 0.832581 | 8.710556e-56 | -8.615850e-47 |
| Msa0269130 | Msa0908660 | 0.847721 | 9.664799e-60 | -8.615850e-47 |
| Msa0269140 | Msa0908660 | 0.925298 | 2.217607e-90 | -8.615850e-47 |
| Msa0269150 | Msa0908660 | 0.851346 | 9.421911e-61 | -8.615850e-47 |
| Msa0344180 | Msa0908660 | 0.811914 | 5.516053e-51 | -8.615850e-47 |
| Msa0344190 | Msa0908660 | 0.831427 | 1.680063e-55 | -8.615850e-47 |
| Msa0344300 | Msa0908660 | 0.807999 | 3.841353e-50 | -8.615850e-47 |
| Msa0344310 | Msa0908660 | 0.853277 | 2.657014e-61 | -8.615850e-47 |
| Msa0582510 | Msa0908660 | 0.845333 | 4.336943e-59 | -8.615850e-47 |
| Msa0582520 | Msa0908660 | 0.818141 | 2.287858e-52 | -8.615850e-47 |
| Msa0582630 | Msa0908660 | 0.837836 | 4.107603e-57 | -8.615850e-47 |
| Msa0582640 | Msa0908660 | 0.857287 | 1.809135e-62 | -8.615850e-47 |
| Msa0582650 | Msa0908660 | 0.810808 | 9.588508e-51 | -8.615850e-47 |
| Msa0582660 | Msa0908660 | 0.831211 | 1.898704e-55 | -8.615850e-47 |
| Msa0582690 | Msa0908660 | 0.840157 | 1.029433e-57 | -8.615850e-47 |
| Msa0582700 | Msa0908660 | 0.820530 | 6.533174e-53 | -8.615850e-47 |
| Msa0582750 | Msa0908660 | 0.823808 | 1.134750e-53 | -8.615850e-47 |
| Msa0582760 | Msa0908660 | 0.853198 | 2.800153e-61 | -8.615850e-47 |
| Msa0582780 | Msa0908660 | 0.836874 | 7.243507e-57 | -8.615850e-47 |
| Msa0582810 | Msa0908660 | 0.837489 | 5.044263e-57 | -8.615850e-47 |
| Msa0582820 | Msa0908660 | 0.832168 | 1.102654e-55 | -8.615850e-47 |
| Msa0582910 | Msa0908660 | 0.845232 | 4.616098e-59 | -8.615850e-47 |
| Msa0582920 | Msa0908660 | 0.813392 | 2.619283e-51 | -8.615850e-47 |
| Msa0582930 | Msa0908660 | 0.845177 | 4.778160e-59 | -8.615850e-47 |
| Msa0591290 | Msa0908660 | 0.841277 | 5.239895e-58 | -8.615850e-47 |
| Msa0591310 | Msa0908660 | 0.844060 | 9.549631e-59 | -8.615850e-47 |
| Msa0591350 | Msa0908660 | 0.872191 | 3.843246e-67 | -8.615850e-47 |
| Msa0591360 | Msa0908660 | 0.832226 | 1.066891e-55 | -8.615850e-47 |
| Msa0591370 | Msa0908660 | 0.805698 | 1.177442e-49 | -8.615850e-47 |
| Msa0591380 | Msa0908660 | 0.814763 | 1.305532e-51 | -8.615850e-47 |
| Msa0867680 | Msa0908660 | 0.900821 | 4.991398e-78 | -8.615850e-47 |
| Msa0867690 | Msa0908660 | 0.837577 | 4.788667e-57 | -8.615850e-47 |
| Msa0876520 | Msa0908660 | 0.802408 | 5.689906e-49 | -8.615850e-47 |
| Msa0908220 | Msa0908660 | 0.856190 | 3.803686e-62 | -8.615850e-47 |
| Msa0908230 | Msa0908660 | 0.927598 | 9.401364e-92 | -8.615850e-47 |
| Msa0908240 | Msa0908660 | 0.835939 | 1.253013e-56 | -8.615850e-47 |
| Msa0908310 | Msa0908660 | 0.902582 | 8.365801e-79 | -8.615850e-47 |
| Msa0908320 | Msa0908660 | 0.849846 | 2.487709e-60 | -8.615850e-47 |
| Msa0908370 | Msa0908660 | 0.901594 | 2.289073e-78 | -8.615850e-47 |
| Msa0908380 | Msa0908660 | 0.829124 | 6.135809e-55 | -8.615850e-47 |
| Msa0908430 | Msa0908660 | 0.846349 | 2.297242e-59 | -8.615850e-47 |
| Msa0908440 | Msa0908660 | 0.935997 | 3.506512e-97 | -8.615850e-47 |
| Msa0908450 | Msa0908660 | 0.859090 | 5.261739e-63 | -8.615850e-47 |
| Msa0908480 | Msa0908660 | 0.808735 | 2.676797e-50 | -8.615850e-47 |
| Msa0908530 | Msa0908660 | 0.906510 | 1.374016e-80 | -8.615850e-47 |
| Msa0908540 | Msa0908660 | 0.866561 | 2.605610e-65 | -8.615850e-47 |
| Msa0908590 | Msa0908660 | 0.841526 | 4.505480e-58 | -8.615850e-47 |
| Msa0908600 | Msa0908660 | 0.943457 | 1.162029e-102 | -8.615850e-47 |
| Msa0908610 | Msa0908660 | 0.822561 | 2.218150e-53 | -8.615850e-47 |
| Msa0908650 | Msa0908660 | 0.845685 | 3.480445e-59 | -8.615850e-47 |
| Msa0908660 | Msa0908670 | 0.878128 | 3.606803e-69 | -8.615850e-47 |
| Msa0908660 | Msa0908720 | 0.894852 | 1.669429e-75 | -8.615850e-47 |
| Msa0908660 | Msa0908730 | 0.846020 | 2.823110e-59 | -8.615850e-47 |
| Msa0908660 | Msa0911190 | 0.840732 | 7.283297e-58 | -8.615850e-47 |
| Msa0908660 | Msa0911200 | 0.837356 | 5.454727e-57 | -8.615850e-47 |
| Msa0908660 | Msa0924830 | 0.800609 | 1.330381e-48 | -8.615850e-47 |
| Msa0908660 | Msa0924870 | 0.813632 | 2.320283e-51 | -8.615850e-47 |
| Msa0908660 | Msa0924890 | 0.808971 | 2.382922e-50 | -8.615850e-47 |
| Msa0908660 | Msa0924930 | 0.891758 | 2.965763e-74 | -8.615850e-47 |
| Msa0908660 | Msa0924940 | 0.845655 | 3.546590e-59 | -8.615850e-47 |
| Msa0908660 | Msa0925100 | 0.850130 | 2.072216e-60 | -8.615850e-47 |
| Msa0908660 | Msa0925110 | 0.851486 | 8.602636e-61 | -8.615850e-47 |
| Msa0908660 | Msa0931070 | 0.827616 | 1.418066e-54 | -8.615850e-47 |
| Msa0908660 | Msa0931080 | 0.810391 | 1.179965e-50 | -8.615850e-47 |
| Msa0908660 | Msa0931130 | 0.833961 | 3.946772e-56 | -8.615850e-47 |
| Msa0908660 | Msa0931140 | 0.820843 | 5.537197e-53 | -8.615850e-47 |
| Msa0908660 | Msa0931220 | 0.822133 | 2.787688e-53 | -8.615850e-47 |
| Msa0908660 | Msa0931240 | 0.826970 | 2.024597e-54 | -8.615850e-47 |
| Msa0908660 | Msa0931260 | 0.852194 | 5.417486e-61 | -8.615850e-47 |
| Msa0908660 | Msa0931270 | 0.823453 | 1.374185e-53 | -8.615850e-47 |
| Msa0908660 | Msa0983630 | 0.916432 | 1.793352e-85 | -8.615850e-47 |
| Msa0908660 | Msa0983640 | 0.845460 | 4.005384e-59 | -8.615850e-47 |
| Msa0908660 | Msa0983720 | 0.810641 | 1.041894e-50 | -8.615850e-47 |
| Msa0908660 | Msa1022050 | 0.890799 | 7.106014e-74 | -8.615850e-47 |
| Msa0908660 | Msa1022060 | 0.841458 | 4.694717e-58 | -8.615850e-47 |
| Msa0908660 | Msa1064410 | 0.829259 | 5.688013e-55 | -8.615850e-47 |
| Msa0908660 | Msa1086070 | 0.819831 | 9.448583e-53 | -8.615850e-47 |
| Msa0908660 | Msa1086080 | 0.846240 | 2.458881e-59 | -8.615850e-47 |
| Msa0908660 | Msa1086090 | 0.814705 | 1.344641e-51 | -8.615850e-47 |
| Msa0908660 | Msa1086100 | 0.813957 | 1.967554e-51 | -8.615850e-47 |
| Msa0908660 | Msa1086140 | 0.828624 | 8.106008e-55 | -8.615850e-47 |
| Msa0908660 | Msa1086150 | 0.821885 | 3.182433e-53 | -8.615850e-47 |
| Msa0908660 | Msa1086180 | 0.827689 | 1.361444e-54 | -8.615850e-47 |
| Msa0908660 | Msa1086190 | 0.841906 | 3.575874e-58 | -8.615850e-47 |
| Msa0908660 | Msa1086200 | 0.816298 | 5.942513e-52 | -8.615850e-47 |
| Msa0908660 | Msa1086210 | 0.827839 | 1.253545e-54 | -8.615850e-47 |
| Msa0908660 | Msa1086250 | 0.803456 | 3.455711e-49 | -8.615850e-47 |
| Msa0908660 | Msa1086260 | 0.801620 | 8.264656e-49 | -8.615850e-47 |
| Msa0908660 | Msa1086270 | 0.836594 | 8.540730e-57 | -8.615850e-47 |
| Msa0908660 | Msa1086280 | 0.808002 | 3.835850e-50 | -8.615850e-47 |
| Msa0908660 | Msa1086360 | 0.801557 | 8.513073e-49 | -8.615850e-47 |
| Msa0908660 | Msa1086380 | 0.818402 | 1.997772e-52 | -8.615850e-47 |
| Msa0908660 | Msa1086450 | 0.820298 | 7.386460e-53 | -8.615850e-47 |
| Msa0908660 | Msa1086470 | 0.803853 | 2.858861e-49 | -8.615850e-47 |
| Msa0908660 | Msa1086550 | 0.853276 | 2.659270e-61 | -8.615850e-47 |
| Msa0908660 | Msa1086560 | 0.838940 | 2.133272e-57 | -8.615850e-47 |
| Msa0908660 | Msa1086590 | 0.901188 | 3.447229e-78 | -8.615850e-47 |
| Msa0908660 | Msa1086600 | 0.874568 | 6.102822e-68 | -8.615850e-47 |
| Msa0908660 | Msa1086720 | 0.862571 | 4.611360e-64 | -8.615850e-47 |
| Msa0908660 | Msa1086730 | 0.908571 | 1.477803e-81 | -8.615850e-47 |
| Msa0908660 | Msa1086740 | 0.841117 | 5.769962e-58 | -8.615850e-47 |
| Msa0908660 | Msa1086790 | 0.900416 | 7.485354e-78 | -8.615850e-47 |
| Msa0908660 | Msa1086800 | 0.866608 | 2.517897e-65 | -8.615850e-47 |
| Msa0908660 | Msa1086860 | 0.800650 | 1.304446e-48 | -8.615850e-47 |
| Msa0908660 | Msa1086880 | 0.833549 | 5.002595e-56 | -8.615850e-47 |
| Msa0908660 | Msa1086890 | 0.833791 | 4.352100e-56 | -8.615850e-47 |
| Msa0908660 | Msa1086900 | 0.816139 | 6.449011e-52 | -8.615850e-47 |
| Msa0908660 | Msa1086910 | 0.816328 | 5.853805e-52 | -8.615850e-47 |
| Msa0908660 | Msa1086960 | 0.879337 | 1.353032e-69 | -8.615850e-47 |
| Msa0908660 | Msa1086970 | 0.869838 | 2.293052e-66 | -8.615850e-47 |
| Msa0908660 | Msa1087030 | 0.844963 | 5.457997e-59 | -8.615850e-47 |
| Msa0908660 | Msa1087040 | 0.895508 | 8.966114e-76 | -8.615850e-47 |
| Msa0908660 | Msa1087050 | 0.834038 | 3.775854e-56 | -8.615850e-47 |
| Msa0908660 | Msa1087110 | 0.895054 | 1.378772e-75 | -8.615850e-47 |
| Msa0908660 | Msa1087120 | 0.851378 | 9.230163e-61 | -8.615850e-47 |
| Msa0908660 | Msa1143120 | 0.844450 | 7.503908e-59 | -8.615850e-47 |
| Msa0908660 | Msa1143130 | 0.804197 | 2.424574e-49 | -8.615850e-47 |
| Msa0908660 | Msa1143160 | 0.826926 | 2.074305e-54 | -8.615850e-47 |
| Msa0908660 | Msa1143170 | 0.824552 | 7.586864e-54 | -8.615850e-47 |
| Msa0908660 | Msa1143180 | 0.822417 | 2.395191e-53 | -8.615850e-47 |
| Msa0908660 | Msa1305090 | 0.840141 | 1.039732e-57 | -8.615850e-47 |
| Msa0908660 | Msa1354420 | 0.899326 | 2.213631e-77 | -8.615850e-47 |
| Msa0908660 | Msa1354430 | 0.856751 | 2.602540e-62 | -8.615850e-47 |
| Msa0908660 | Msa1354480 | 0.863346 | 2.657617e-64 | -8.615850e-47 |
| Msa0908660 | Msa1354490 | 0.915177 | 8.019077e-85 | -8.615850e-47 |
| Msa0908660 | Msa1354500 | 0.845757 | 3.327930e-59 | -8.615850e-47 |
| Msa0908660 | Msa1354550 | 0.913375 | 6.620870e-84 | -8.615850e-47 |
| Msa0908660 | Msa1354560 | 0.863508 | 2.367577e-64 | -8.615850e-47 |
| Msa0908660 | Msa1354610 | 0.883687 | 3.632411e-71 | -8.615850e-47 |
| Msa0908660 | Msa1354620 | 0.937598 | 2.669398e-98 | -8.615850e-47 |
| Msa0908660 | Msa1354630 | 0.849075 | 4.081583e-60 | -8.615850e-47 |
| Msa0908660 | Msa1354680 | 0.837859 | 4.053951e-57 | -8.615850e-47 |
| Msa0908660 | Msa1354690 | 0.890482 | 9.468889e-74 | -8.615850e-47 |
| Msa0908660 | Msa1354700 | 0.847494 | 1.116012e-59 | -8.615850e-47 |
| Msa0908660 | Msa1354740 | 0.853455 | 2.362227e-61 | -8.615850e-47 |
| Msa0908660 | Msa1354750 | 0.936250 | 2.346002e-97 | -8.615850e-47 |
| Msa0908660 | Msa1354760 | 0.837331 | 5.535543e-57 | -8.615850e-47 |
| Msa0908660 | Msa1354810 | 0.901583 | 2.313368e-78 | -8.615850e-47 |
| Msa0908660 | Msa1354820 | 0.857081 | 2.081480e-62 | -8.615850e-47 |
| Msa0908660 | Msa1354900 | 0.822347 | 2.486377e-53 | -8.615850e-47 |
| Msa0908660 | Msa1354910 | 0.845791 | 3.257246e-59 | -8.615850e-47 |
| Msa0908660 | Msa1354920 | 0.832800 | 7.688971e-56 | -8.615850e-47 |
| Msa0908660 | Msa1354930 | 0.825030 | 5.854443e-54 | -8.615850e-47 |
| Msa0908660 | Msa1354980 | 0.891323 | 4.411000e-74 | -8.615850e-47 |
| Msa0908660 | Msa1354990 | 0.848304 | 6.676309e-60 | -8.615850e-47 |
| Msa0908660 | Msa1355070 | 0.810861 | 9.340224e-51 | -8.615850e-47 |
| Msa0908660 | Msa1355080 | 0.828063 | 1.107045e-54 | -8.615850e-47 |
| Msa0908660 | Msa1355090 | 0.834551 | 2.808204e-56 | -8.615850e-47 |
| Msa0908660 | Msa1355100 | 0.818580 | 1.819919e-52 | -8.615850e-47 |
| Msa0908660 | Msa1365890 | 0.892786 | 1.151016e-74 | -8.615850e-47 |
| Msa0908660 | Msa1365900 | 0.831816 | 1.346730e-55 | -8.615850e-47 |
| Msa0908660 | Msa1365950 | 0.841289 | 5.202198e-58 | -8.615850e-47 |
| Msa0908660 | Msa1365960 | 0.878504 | 2.661256e-69 | -8.615850e-47 |
| Msa0908660 | Msa1365970 | 0.832413 | 9.587171e-56 | -8.615850e-47 |
| Msa0908660 | Msa1366080 | 0.898287 | 6.149136e-77 | -8.615850e-47 |
| Msa0908660 | Msa1366090 | 0.843491 | 1.356069e-58 | -8.615850e-47 |
| Msa0908660 | Msa1368230 | 0.911391 | 6.411772e-83 | -8.615850e-47 |
| Msa0908660 | Msa1368240 | 0.828254 | 9.957200e-55 | -8.615850e-47 |
| Msa0908660 | Msa1380590 | 0.804139 | 2.493502e-49 | -8.615850e-47 |
| Msa0908660 | Msa1380600 | 0.849573 | 2.965848e-60 | -8.615850e-47 |
| Msa0908660 | Msa1380620 | 0.822284 | 2.572752e-53 | -8.615850e-47 |
| Msa0908660 | Msa1380690 | 0.805758 | 1.143562e-49 | -8.615850e-47 |
| Msa0908660 | Msa1385410 | 0.888567 | 5.263554e-73 | -8.615850e-47 |
| Msa0908660 | Msa1385420 | 0.823158 | 1.610106e-53 | -8.615850e-47 |
| Msa0908660 | Msa1391090 | 0.865363 | 6.235064e-65 | -8.615850e-47 |
| Msa0908660 | Msa1391100 | 0.915705 | 4.284168e-85 | -8.615850e-47 |
| Msa0908660 | Msa1391110 | 0.822386 | 2.436053e-53 | -8.615850e-47 |
| Msa0908660 | Msa1391160 | 0.894508 | 2.309865e-75 | -8.615850e-47 |
| Msa0908660 | Msa1391170 | 0.838798 | 2.321650e-57 | -8.615850e-47 |
| Msa0908660 | Msa1391220 | 0.871599 | 6.044106e-67 | -8.615850e-47 |
| Msa0908660 | Msa1391230 | 0.898810 | 3.684368e-77 | -8.615850e-47 |
| Msa0908660 | Msa1391240 | 0.837512 | 4.977111e-57 | -8.615850e-47 |
| Msa0908660 | Msa1394030 | 0.819107 | 1.381578e-52 | -8.615850e-47 |
| Msa0908660 | Msa1394040 | 0.846969 | 1.554549e-59 | -8.615850e-47 |
| Msa0908660 | Msa1394150 | 0.841379 | 4.924710e-58 | -8.615850e-47 |
| Msa0908660 | Msa1394160 | 0.811006 | 8.687801e-51 | -8.615850e-47 |
| Msa0908660 | Msa1394170 | 0.806589 | 7.644737e-50 | -8.615850e-47 |
| Msa0908660 | Msa1394210 | 0.833295 | 5.788959e-56 | -8.615850e-47 |
| Msa0908660 | Msa1394220 | 0.827347 | 1.644940e-54 | -8.615850e-47 |
| Msa0908660 | Msa1394230 | 0.819552 | 1.094098e-52 | -8.615850e-47 |
| Msa0908660 | Msa1460120 | 0.832595 | 8.640970e-56 | -8.615850e-47 |
| Msa0908660 | Msa1460130 | 0.837205 | 5.962349e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908660 | MtrunA17_CPg0492421 | 85.333 | 150 | 12 | 1 | 14 | 153 | 7 | 156 | 1.50e-87 | 255 |
| Msa0908660 | MtrunA17_Chr4g0016101 | 85.333 | 150 | 12 | 1 | 14 | 153 | 7 | 156 | 1.50e-87 | 255 |
| Msa0908660 | MtrunA17_Chr3g0090841 | 85.333 | 150 | 12 | 1 | 14 | 153 | 7 | 156 | 1.50e-87 | 255 |
| Msa0908660 | MtrunA17_CPg0492431 | 96.875 | 64 | 2 | 0 | 155 | 218 | 4 | 67 | 3.47e-36 | 128 |
| Msa0908660 | MtrunA17_Chr3g0090851 | 96.875 | 64 | 2 | 0 | 155 | 218 | 4 | 67 | 3.47e-36 | 128 |
| Msa0908660 | MtrunA17_Chr4g0016091 | 96.875 | 64 | 2 | 0 | 155 | 218 | 4 | 67 | 3.47e-36 | 128 |
| Msa0908660 | MtrunA17_Chr4g0002541 | 73.333 | 60 | 8 | 1 | 32 | 83 | 1 | 60 | 9.03e-22 | 84.7 |
| Msa0908660 | MtrunA17_Chr4g0057401 | 87.179 | 39 | 5 | 0 | 115 | 153 | 1 | 39 | 6.55e-16 | 68.9 |
| Msa0908660 | MtrunA17_Chr7g0268431 | 33.758 | 157 | 91 | 4 | 5 | 148 | 50 | 206 | 8.85e-13 | 64.7 |
| Msa0908660 | MtrunA17_Chr1g0176261 | 33.333 | 159 | 93 | 4 | 3 | 148 | 81 | 239 | 1.18e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908660 | ATCG00900.1 | 87.838 | 148 | 10 | 1 | 14 | 153 | 7 | 154 | 4.25e-91 | 264 |
| Msa0908660 | ATCG01240.1 | 87.838 | 148 | 10 | 1 | 14 | 153 | 7 | 154 | 4.25e-91 | 264 |
| Msa0908660 | ATMG01270.1 | 31.655 | 139 | 77 | 4 | 29 | 153 | 11 | 145 | 3.40e-13 | 65.1 |
| Msa0908660 | AT2G07696.1 | 31.655 | 139 | 77 | 4 | 29 | 153 | 11 | 145 | 3.40e-13 | 65.1 |
| Msa0908660 | AT2G37270.1 | 33.333 | 159 | 93 | 4 | 3 | 148 | 49 | 207 | 1.02e-11 | 62.4 |
| Msa0908660 | AT2G37270.2 | 33.333 | 159 | 93 | 4 | 3 | 148 | 49 | 207 | 1.02e-11 | 62.4 |
| Msa0908660 | AT3G11940.1 | 32.704 | 159 | 94 | 4 | 3 | 148 | 49 | 207 | 2.72e-11 | 61.2 |
| Msa0908660 | AT3G11940.2 | 32.704 | 159 | 94 | 4 | 3 | 148 | 49 | 207 | 2.72e-11 | 61.2 |
Find 34 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCCGTGACATGAGCGTAAA+AGG | 0.177996 | 6_2:+9778525 | None:intergenic |
| ACTAATCGATTACGATAAAT+TGG | 0.238141 | 6_2:+9778469 | None:intergenic |
| CTTGCCATTCGTTGGTTATT+AGG | 0.268444 | 6_2:-9778220 | Msa0908660:CDS |
| CATCAAGTTCCCGTTGAAAT+AGG | 0.307921 | 6_2:-9778262 | Msa0908660:CDS |
| AAAACGTCCAGGTCGAAATA+TGG | 0.317789 | 6_2:-9778188 | Msa0908660:CDS |
| CAAATTAAGTTCCGAATTAG+TGG | 0.342047 | 6_2:-9778161 | Msa0908660:CDS |
| TGGCGATGCCATACGCAAAA+AGG | 0.366109 | 6_2:-9778122 | Msa0908660:CDS |
| TTTGGCAGCATCCACTAATT+CGG | 0.404543 | 6_2:+9778150 | None:intergenic |
| ACGTATTGCTTGACGTAAAA+CGG | 0.405511 | 6_2:+9778336 | None:intergenic |
| GCTTGACGTAAAACGGATAG+TGG | 0.418362 | 6_2:+9778343 | None:intergenic |
| GTAAAAGCAAGACGCGTAAA+CGG | 0.427761 | 6_2:-9778292 | Msa0908660:CDS |
| TATGGCATCGCCATTCCCTT+TGG | 0.436234 | 6_2:+9778132 | None:intergenic |
| TGTGTGGATCCTATTTCAAC+GGG | 0.470768 | 6_2:+9778253 | None:intergenic |
| TTATCTATCGAGCTATGAAA+AGG | 0.512086 | 6_2:-9778390 | Msa0908660:CDS |
| GAAAAGCACTTGCCATTCGT+TGG | 0.526859 | 6_2:-9778228 | Msa0908660:CDS |
| GTGGATGCTGCCAAAGGGAA+TGG | 0.532446 | 6_2:-9778142 | Msa0908660:CDS |
| TAATCGATTAGTTAACATGT+TGG | 0.538486 | 6_2:-9778458 | Msa0908660:CDS |
| GGCGCATCCCGAAAACGTCC+AGG | 0.540732 | 6_2:-9778199 | Msa0908660:CDS |
| AAAGGAAGAGACTCATAGAA+TGG | 0.548096 | 6_2:-9778104 | Msa0908660:CDS |
| TTGTGTGGATCCTATTTCAA+CGG | 0.548545 | 6_2:+9778252 | None:intergenic |
| GCCGTGACATGAGCGTAAAA+GGG | 0.558201 | 6_2:+9778526 | None:intergenic |
| ATCGAAAAGAAGCAAATGAA+AGG | 0.561694 | 6_2:+9777759 | None:intergenic |
| TCATGGGTTCTTCTCTCCAT+CGG | 0.567612 | 6_2:+9777590 | None:intergenic |
| TAACGGCGCTGTTGTTCCGA+TGG | 0.571426 | 6_2:-9777606 | Msa0908660:CDS |
| AATTAGTGGATGCTGCCAAA+GGG | 0.575951 | 6_2:-9778147 | Msa0908660:CDS |
| GAATTAGTGGATGCTGCCAA+AGG | 0.584526 | 6_2:-9778148 | Msa0908660:CDS |
| AGAGACTCATAGAATGGCAG+AGG | 0.593635 | 6_2:-9778098 | Msa0908660:CDS |
| TTGAAAGCCATATTTCGACC+TGG | 0.605724 | 6_2:+9778181 | None:intergenic |
| TGCGCCTAATAACCAACGAA+TGG | 0.620213 | 6_2:+9778216 | None:intergenic |
| TCGATTACGATAAATTGGAT+CGG | 0.627987 | 6_2:+9778474 | None:intergenic |
| AAGTTTAGTAATGAGCATAA+CGG | 0.644237 | 6_2:-9777623 | Msa0908660:CDS |
| GTTAACCGTATTATGAAACA+CGG | 0.650772 | 6_2:-9778436 | Msa0908660:CDS |
| TTTACGCTCATGTCACGGCG+AGG | 0.672550 | 6_2:-9778522 | Msa0908660:CDS |
| GTTGAAATAGGATCCACACA+AGG | 0.731975 | 6_2:-9778250 | Msa0908660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAAAGAGGAATATT+TGG | - | chr6_2:9778246-9778265 | Msa0908660:CDS | 15.0% |
| !! | AATAAATAAAGAGGAATATT+TGG | - | chr6_2:9778246-9778265 | Msa0908660:CDS | 15.0% |
| !! | AGAATCAATAGAAAAAGAAT+CGG | - | chr6_2:9778143-9778162 | Msa0908660:CDS | 20.0% |
| !! | TTGCTTAAGAATAAATAAAG+AGG | - | chr6_2:9778237-9778256 | Msa0908660:CDS | 20.0% |
| !!! | AGGAATATTTGGTATTTTTT+TGG | - | chr6_2:9778257-9778276 | Msa0908660:CDS | 20.0% |
| !! | AGAATCAATAGAAAAAGAAT+CGG | - | chr6_2:9778143-9778162 | Msa0908660:CDS | 20.0% |
| !! | TTGCTTAAGAATAAATAAAG+AGG | - | chr6_2:9778237-9778256 | Msa0908660:CDS | 20.0% |
| !!! | AGGAATATTTGGTATTTTTT+TGG | - | chr6_2:9778257-9778276 | Msa0908660:CDS | 20.0% |
| ! | ACTAATCGATTACGATAAAT+TGG | + | chr6_2:9777657-9777676 | None:intergenic | 25.0% |
| !! | TAATCGATTAGTTAACATGT+TGG | - | chr6_2:9777665-9777684 | Msa0908660:CDS | 25.0% |
| !! | TTTTTCCGTGTTTCATAATA+CGG | + | chr6_2:9777695-9777714 | None:intergenic | 25.0% |
| !! | GATTCTTTTCCAATTATGTA+TGG | + | chr6_2:9778129-9778148 | None:intergenic | 25.0% |
| ! | GAAGAATTAGACCAAAAATT+AGG | + | chr6_2:9778416-9778435 | None:intergenic | 25.0% |
| ! | AAGTTTAGTAATGAGCATAA+CGG | - | chr6_2:9778500-9778519 | Msa0908660:CDS | 25.0% |
| ! | ACTAATCGATTACGATAAAT+TGG | + | chr6_2:9777657-9777676 | None:intergenic | 25.0% |
| !! | TAATCGATTAGTTAACATGT+TGG | - | chr6_2:9777665-9777684 | Msa0908660:CDS | 25.0% |
| !! | TTTTTCCGTGTTTCATAATA+CGG | + | chr6_2:9777695-9777714 | None:intergenic | 25.0% |
| !! | GATTCTTTTCCAATTATGTA+TGG | + | chr6_2:9778129-9778148 | None:intergenic | 25.0% |
| ! | GAAGAATTAGACCAAAAATT+AGG | + | chr6_2:9778416-9778435 | None:intergenic | 25.0% |
| ! | AAGTTTAGTAATGAGCATAA+CGG | - | chr6_2:9778500-9778519 | Msa0908660:CDS | 25.0% |
| ! | ATAAATTGGATCGGATTTTG+CGG | + | chr6_2:9777643-9777662 | None:intergenic | 30.0% |
| TCGATTACGATAAATTGGAT+CGG | + | chr6_2:9777652-9777671 | None:intergenic | 30.0% | |
| GTTAACCGTATTATGAAACA+CGG | - | chr6_2:9777687-9777706 | Msa0908660:CDS | 30.0% | |
| GAAACACGGAAAAAAATCAT+TGG | - | chr6_2:9777701-9777720 | Msa0908660:CDS | 30.0% | |
| TTATCTATCGAGCTATGAAA+AGG | - | chr6_2:9777733-9777752 | Msa0908660:CDS | 30.0% | |
| !! | TCTTGCTTTTACTGCTATAT+CGG | + | chr6_2:9777823-9777842 | None:intergenic | 30.0% |
| CAAATTAAGTTCCGAATTAG+TGG | - | chr6_2:9777962-9777981 | Msa0908660:intron | 30.0% | |
| ACATAGACCTATGTTATGTA+TGG | - | chr6_2:9778101-9778120 | Msa0908660:CDS | 30.0% | |
| TATGGATCCATACATAACAT+AGG | + | chr6_2:9778111-9778130 | None:intergenic | 30.0% | |
| TGTATGGATCCATACATAAT+TGG | - | chr6_2:9778117-9778136 | Msa0908660:CDS | 30.0% | |
| GAAAGACGAAATAGAAATGA+TGG | - | chr6_2:9778191-9778210 | Msa0908660:CDS | 30.0% | |
| ATCGAAAAGAAGCAAATGAA+AGG | + | chr6_2:9778367-9778386 | None:intergenic | 30.0% | |
| ! | TTTCATTTGCTTCTTTTCGA+TGG | - | chr6_2:9778366-9778385 | Msa0908660:CDS | 30.0% |
| !!! | CGATGGAAGTTTTATTTTTC+CGG | - | chr6_2:9778383-9778402 | Msa0908660:CDS | 30.0% |
| CCAAAAATTAGGATCAATTC+CGG | + | chr6_2:9778405-9778424 | None:intergenic | 30.0% | |
| ! | AGATAGATCTTTTTGATCAG+AGG | + | chr6_2:9778457-9778476 | None:intergenic | 30.0% |
| CTGATCAAAAAGATCTATCT+TGG | - | chr6_2:9778457-9778476 | Msa0908660:CDS | 30.0% | |
| ! | ATAAATTGGATCGGATTTTG+CGG | + | chr6_2:9777643-9777662 | None:intergenic | 30.0% |
| TCGATTACGATAAATTGGAT+CGG | + | chr6_2:9777652-9777671 | None:intergenic | 30.0% | |
| GTTAACCGTATTATGAAACA+CGG | - | chr6_2:9777687-9777706 | Msa0908660:CDS | 30.0% | |
| GAAACACGGAAAAAAATCAT+TGG | - | chr6_2:9777701-9777720 | Msa0908660:CDS | 30.0% | |
| TTATCTATCGAGCTATGAAA+AGG | - | chr6_2:9777733-9777752 | Msa0908660:CDS | 30.0% | |
| !! | TCTTGCTTTTACTGCTATAT+CGG | + | chr6_2:9777823-9777842 | None:intergenic | 30.0% |
| CAAATTAAGTTCCGAATTAG+TGG | - | chr6_2:9777962-9777981 | Msa0908660:intron | 30.0% | |
| ACATAGACCTATGTTATGTA+TGG | - | chr6_2:9778101-9778120 | Msa0908660:CDS | 30.0% | |
| TATGGATCCATACATAACAT+AGG | + | chr6_2:9778111-9778130 | None:intergenic | 30.0% | |
| TGTATGGATCCATACATAAT+TGG | - | chr6_2:9778117-9778136 | Msa0908660:CDS | 30.0% | |
| GAAAGACGAAATAGAAATGA+TGG | - | chr6_2:9778191-9778210 | Msa0908660:CDS | 30.0% | |
| ATCGAAAAGAAGCAAATGAA+AGG | + | chr6_2:9778367-9778386 | None:intergenic | 30.0% | |
| ! | TTTCATTTGCTTCTTTTCGA+TGG | - | chr6_2:9778366-9778385 | Msa0908660:CDS | 30.0% |
| !!! | CGATGGAAGTTTTATTTTTC+CGG | - | chr6_2:9778383-9778402 | Msa0908660:CDS | 30.0% |
| CCAAAAATTAGGATCAATTC+CGG | + | chr6_2:9778405-9778424 | None:intergenic | 30.0% | |
| ! | AGATAGATCTTTTTGATCAG+AGG | + | chr6_2:9778457-9778476 | None:intergenic | 30.0% |
| CTGATCAAAAAGATCTATCT+TGG | - | chr6_2:9778457-9778476 | Msa0908660:CDS | 30.0% | |
| ACGTATTGCTTGACGTAAAA+CGG | + | chr6_2:9777790-9777809 | None:intergenic | 35.0% | |
| ! | TTTTACGTCAAGCAATACGT+GGG | - | chr6_2:9777790-9777809 | Msa0908660:intron | 35.0% |
| !! | CTTGCTTTTACTGCTATATC+GGG | + | chr6_2:9777822-9777841 | None:intergenic | 35.0% |
| TTGTGTGGATCCTATTTCAA+CGG | + | chr6_2:9777874-9777893 | None:intergenic | 35.0% | |
| AAAGGAAGAGACTCATAGAA+TGG | - | chr6_2:9778019-9778038 | Msa0908660:intron | 35.0% | |
| ! | ATTTTCGTTAATCCATGAGC+AGG | - | chr6_2:9778066-9778085 | Msa0908660:intron | 35.0% |
| ! | CCGGAATTGATCCTAATTTT+TGG | - | chr6_2:9778402-9778421 | Msa0908660:CDS | 35.0% |
| ACGTATTGCTTGACGTAAAA+CGG | + | chr6_2:9777790-9777809 | None:intergenic | 35.0% | |
| ! | TTTTACGTCAAGCAATACGT+GGG | - | chr6_2:9777790-9777809 | Msa0908660:intron | 35.0% |
| !! | CTTGCTTTTACTGCTATATC+GGG | + | chr6_2:9777822-9777841 | None:intergenic | 35.0% |
| TTGTGTGGATCCTATTTCAA+CGG | + | chr6_2:9777874-9777893 | None:intergenic | 35.0% | |
| AAAGGAAGAGACTCATAGAA+TGG | - | chr6_2:9778019-9778038 | Msa0908660:intron | 35.0% | |
| ! | ATTTTCGTTAATCCATGAGC+AGG | - | chr6_2:9778066-9778085 | Msa0908660:intron | 35.0% |
| ! | CCGGAATTGATCCTAATTTT+TGG | - | chr6_2:9778402-9778421 | Msa0908660:CDS | 35.0% |
| ! | GTTTTACGTCAAGCAATACG+TGG | - | chr6_2:9777789-9777808 | Msa0908660:intron | 40.0% |
| TTTACGTCAAGCAATACGTG+GGG | - | chr6_2:9777791-9777810 | Msa0908660:intron | 40.0% | |
| GTAAAAGCAAGACGCGTAAA+CGG | - | chr6_2:9777831-9777850 | Msa0908660:intron | 40.0% | |
| CATCAAGTTCCCGTTGAAAT+AGG | - | chr6_2:9777861-9777880 | Msa0908660:intron | 40.0% | |
| TGTGTGGATCCTATTTCAAC+GGG | + | chr6_2:9777873-9777892 | None:intergenic | 40.0% | |
| GTTGAAATAGGATCCACACA+AGG | - | chr6_2:9777873-9777892 | Msa0908660:intron | 40.0% | |
| ! | CTTGCCATTCGTTGGTTATT+AGG | - | chr6_2:9777903-9777922 | Msa0908660:intron | 40.0% |
| ! | TATTTCGACCTGGACGTTTT+CGG | + | chr6_2:9777935-9777954 | None:intergenic | 40.0% |
| AAAACGTCCAGGTCGAAATA+TGG | - | chr6_2:9777935-9777954 | Msa0908660:intron | 40.0% | |
| TTGAAAGCCATATTTCGACC+TGG | + | chr6_2:9777945-9777964 | None:intergenic | 40.0% | |
| TTTGGCAGCATCCACTAATT+CGG | + | chr6_2:9777976-9777995 | None:intergenic | 40.0% | |
| ! | AATTAGTGGATGCTGCCAAA+GGG | - | chr6_2:9777976-9777995 | Msa0908660:intron | 40.0% |
| ! | AGTCTCTTCCTTTTTGCGTA+TGG | + | chr6_2:9778012-9778031 | None:intergenic | 40.0% |
| GTGTATATAGATCCTGCTCA+TGG | + | chr6_2:9778081-9778100 | None:intergenic | 40.0% | |
| ! | ATGGCTCAACTAAGCACTTT+TGG | - | chr6_2:9778210-9778229 | Msa0908660:CDS | 40.0% |
| ! | TGGCTCAACTAAGCACTTTT+GGG | - | chr6_2:9778211-9778230 | Msa0908660:CDS | 40.0% |
| ! | GTTTTACGTCAAGCAATACG+TGG | - | chr6_2:9777789-9777808 | Msa0908660:intron | 40.0% |
| TTTACGTCAAGCAATACGTG+GGG | - | chr6_2:9777791-9777810 | Msa0908660:intron | 40.0% | |
| GTAAAAGCAAGACGCGTAAA+CGG | - | chr6_2:9777831-9777850 | Msa0908660:intron | 40.0% | |
| CATCAAGTTCCCGTTGAAAT+AGG | - | chr6_2:9777861-9777880 | Msa0908660:intron | 40.0% | |
| TGTGTGGATCCTATTTCAAC+GGG | + | chr6_2:9777873-9777892 | None:intergenic | 40.0% | |
| GTTGAAATAGGATCCACACA+AGG | - | chr6_2:9777873-9777892 | Msa0908660:intron | 40.0% | |
| ! | CTTGCCATTCGTTGGTTATT+AGG | - | chr6_2:9777903-9777922 | Msa0908660:intron | 40.0% |
| ! | TATTTCGACCTGGACGTTTT+CGG | + | chr6_2:9777935-9777954 | None:intergenic | 40.0% |
| AAAACGTCCAGGTCGAAATA+TGG | - | chr6_2:9777935-9777954 | Msa0908660:intron | 40.0% | |
| TTGAAAGCCATATTTCGACC+TGG | + | chr6_2:9777945-9777964 | None:intergenic | 40.0% | |
| TTTGGCAGCATCCACTAATT+CGG | + | chr6_2:9777976-9777995 | None:intergenic | 40.0% | |
| ! | AATTAGTGGATGCTGCCAAA+GGG | - | chr6_2:9777976-9777995 | Msa0908660:intron | 40.0% |
| ! | AGTCTCTTCCTTTTTGCGTA+TGG | + | chr6_2:9778012-9778031 | None:intergenic | 40.0% |
| GTGTATATAGATCCTGCTCA+TGG | + | chr6_2:9778081-9778100 | None:intergenic | 40.0% | |
| ! | ATGGCTCAACTAAGCACTTT+TGG | - | chr6_2:9778210-9778229 | Msa0908660:CDS | 40.0% |
| ! | TGGCTCAACTAAGCACTTTT+GGG | - | chr6_2:9778211-9778230 | Msa0908660:CDS | 40.0% |
| ! | TCCCTTTTACGCTCATGTCA+CGG | - | chr6_2:9777596-9777615 | Msa0908660:CDS | 45.0% |
| GCTTGACGTAAAACGGATAG+TGG | + | chr6_2:9777783-9777802 | None:intergenic | 45.0% | |
| !! | GAAAAGCACTTGCCATTCGT+TGG | - | chr6_2:9777895-9777914 | Msa0908660:intron | 45.0% |
| TGCGCCTAATAACCAACGAA+TGG | + | chr6_2:9777910-9777929 | None:intergenic | 45.0% | |
| ! | ATTTCGACCTGGACGTTTTC+GGG | + | chr6_2:9777934-9777953 | None:intergenic | 45.0% |
| ! | GAATTAGTGGATGCTGCCAA+AGG | - | chr6_2:9777975-9777994 | Msa0908660:intron | 45.0% |
| AGAGACTCATAGAATGGCAG+AGG | - | chr6_2:9778025-9778044 | Msa0908660:intron | 45.0% | |
| ! | GGCTCAACTAAGCACTTTTG+GGG | - | chr6_2:9778212-9778231 | Msa0908660:CDS | 45.0% |
| TCATGGGTTCTTCTCTCCAT+CGG | + | chr6_2:9778536-9778555 | None:intergenic | 45.0% | |
| ! | TCCCTTTTACGCTCATGTCA+CGG | - | chr6_2:9777596-9777615 | Msa0908660:CDS | 45.0% |
| GCTTGACGTAAAACGGATAG+TGG | + | chr6_2:9777783-9777802 | None:intergenic | 45.0% | |
| !! | GAAAAGCACTTGCCATTCGT+TGG | - | chr6_2:9777895-9777914 | Msa0908660:intron | 45.0% |
| TGCGCCTAATAACCAACGAA+TGG | + | chr6_2:9777910-9777929 | None:intergenic | 45.0% | |
| ! | ATTTCGACCTGGACGTTTTC+GGG | + | chr6_2:9777934-9777953 | None:intergenic | 45.0% |
| ! | GAATTAGTGGATGCTGCCAA+AGG | - | chr6_2:9777975-9777994 | Msa0908660:intron | 45.0% |
| AGAGACTCATAGAATGGCAG+AGG | - | chr6_2:9778025-9778044 | Msa0908660:intron | 45.0% | |
| ! | GGCTCAACTAAGCACTTTTG+GGG | - | chr6_2:9778212-9778231 | Msa0908660:CDS | 45.0% |
| TCATGGGTTCTTCTCTCCAT+CGG | + | chr6_2:9778536-9778555 | None:intergenic | 45.0% | |
| GCCGTGACATGAGCGTAAAA+GGG | + | chr6_2:9777600-9777619 | None:intergenic | 50.0% | |
| ! | GGCAAGTGCTTTTCCTTGTG+TGG | + | chr6_2:9777889-9777908 | None:intergenic | 50.0% |
| TATGGCATCGCCATTCCCTT+TGG | + | chr6_2:9777994-9778013 | None:intergenic | 50.0% | |
| TGGCGATGCCATACGCAAAA+AGG | - | chr6_2:9778001-9778020 | Msa0908660:intron | 50.0% | |
| GCCGTGACATGAGCGTAAAA+GGG | + | chr6_2:9777600-9777619 | None:intergenic | 50.0% | |
| ! | GGCAAGTGCTTTTCCTTGTG+TGG | + | chr6_2:9777889-9777908 | None:intergenic | 50.0% |
| TATGGCATCGCCATTCCCTT+TGG | + | chr6_2:9777994-9778013 | None:intergenic | 50.0% | |
| TGGCGATGCCATACGCAAAA+AGG | - | chr6_2:9778001-9778020 | Msa0908660:intron | 50.0% | |
| CGCCGTGACATGAGCGTAAA+AGG | + | chr6_2:9777601-9777620 | None:intergenic | 55.0% | |
| TTTACGCTCATGTCACGGCG+AGG | - | chr6_2:9777601-9777620 | Msa0908660:CDS | 55.0% | |
| GTGGATGCTGCCAAAGGGAA+TGG | - | chr6_2:9777981-9778000 | Msa0908660:intron | 55.0% | |
| TAACGGCGCTGTTGTTCCGA+TGG | - | chr6_2:9778517-9778536 | Msa0908660:CDS | 55.0% | |
| CGCCGTGACATGAGCGTAAA+AGG | + | chr6_2:9777601-9777620 | None:intergenic | 55.0% | |
| TTTACGCTCATGTCACGGCG+AGG | - | chr6_2:9777601-9777620 | Msa0908660:CDS | 55.0% | |
| GTGGATGCTGCCAAAGGGAA+TGG | - | chr6_2:9777981-9778000 | Msa0908660:intron | 55.0% | |
| TAACGGCGCTGTTGTTCCGA+TGG | - | chr6_2:9778517-9778536 | Msa0908660:CDS | 55.0% | |
| GGCGCATCCCGAAAACGTCC+AGG | - | chr6_2:9777924-9777943 | Msa0908660:intron | 65.0% | |
| GGCGCATCCCGAAAACGTCC+AGG | - | chr6_2:9777924-9777943 | Msa0908660:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 9777588 | 9778557 | 9777588 | ID=Msa0908660;Name=Msa0908660 |
| chr6_2 | mRNA | 9777588 | 9778557 | 9777588 | ID=Msa0908660-mRNA-1;Parent=Msa0908660;Name=Msa0908660-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|0|0|3|0|218 |
| chr6_2 | exon | 9778338 | 9778557 | 9778338 | ID=Msa0908660-mRNA-1:exon:2410;Parent=Msa0908660-mRNA-1 |
| chr6_2 | exon | 9778074 | 9778313 | 9778074 | ID=Msa0908660-mRNA-1:exon:2409;Parent=Msa0908660-mRNA-1 |
| chr6_2 | exon | 9777588 | 9777781 | 9777588 | ID=Msa0908660-mRNA-1:exon:2408;Parent=Msa0908660-mRNA-1 |
| chr6_2 | CDS | 9778338 | 9778557 | 9778338 | ID=Msa0908660-mRNA-1:cds;Parent=Msa0908660-mRNA-1 |
| chr6_2 | CDS | 9778074 | 9778313 | 9778074 | ID=Msa0908660-mRNA-1:cds;Parent=Msa0908660-mRNA-1 |
| chr6_2 | CDS | 9777588 | 9777781 | 9777588 | ID=Msa0908660-mRNA-1:cds;Parent=Msa0908660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
