AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1143160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1143160 MtrunA17_Chr4g0015651 80.471 425 4 5 209 554 7 431 0.0 640
Msa1143160 MtrunA17_Chr4g0016741 80.471 425 4 5 209 554 7 431 0.0 640
Msa1143160 MtrunA17_CPg0492941 80.471 425 4 5 209 554 7 431 0.0 640
Msa1143160 MtrunA17_MTg0490471 54.042 433 111 6 210 554 9 441 1.38e-139 414
Msa1143160 MtrunA17_Chr2g0278821 84.656 189 15 2 380 554 24 212 1.42e-104 316
Msa1143160 MtrunA17_CPg0492961 94.118 119 2 1 95 208 49 167 7.09e-69 220
Msa1143160 MtrunA17_Chr2g0286451 65.574 183 8 2 271 398 7 189 2.19e-67 216
Msa1143160 MtrunA17_Chr4g0040631 88.034 117 4 1 209 315 7 123 9.17e-59 192
Msa1143160 MtrunA17_Chr4g0016711 98.765 81 1 0 1 81 1 81 4.21e-46 156
Msa1143160 MtrunA17_CPg0492971 98.765 81 1 0 1 81 1 81 4.21e-46 156
Msa1143160 MtrunA17_Chr4g0015621 98.765 81 1 0 1 81 1 81 4.21e-46 156
Msa1143160 MtrunA17_Chr4g0061471 73.333 75 8 1 292 354 1 75 1.05e-27 106
Msa1143160 MtrunA17_Chr1g0211291 27.714 350 166 10 227 502 44 380 2.49e-20 94.4
Msa1143160 MtrunA17_Chr7g0250051 27.507 349 167 10 227 502 43 378 7.39e-20 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1143160 ATCG00120.1 77.647 425 16 5 209 554 7 431 0.0 620
Msa1143160 ATMG01190.1 51.039 433 124 6 210 554 9 441 1.90e-130 390
Msa1143160 AT2G07698.1 49.260 473 150 7 172 554 239 711 5.86e-129 395
Msa1143160 ATCG00130.1 78.689 122 21 1 93 209 49 170 1.00e-57 191
Msa1143160 ATCG00140.1 95.062 81 4 0 1 81 1 81 5.31e-44 151
Msa1143160 AT4G38510.5 27.794 349 166 10 227 502 50 385 3.88e-21 97.1
Msa1143160 AT4G38510.1 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa1143160 AT4G38510.3 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa1143160 AT4G38510.4 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa1143160 AT4G38510.2 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa1143160 AT1G76030.1 28.378 296 140 7 279 502 82 377 6.30e-20 93.6
Msa1143160 AT1G20260.1 36.000 125 79 1 379 502 254 378 7.97e-15 77.4

Find 125 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGAAGCTTTAACTATTTA+TGG 0.037973 7_4:-18359362 Msa1143160:CDS
ACCAGTAAGTGAGGGTTATT+TGG 0.166311 7_4:-18357121 Msa1143160:CDS
TGTAGGCATTGCTTTGAATT+TGG 0.201612 7_4:-18357235 Msa1143160:CDS
CCCAAATAACCCTCACTTAC+TGG 0.241036 7_4:+18357120 None:intergenic
TTATTTACATTCTCGTCTTT+TGG 0.245014 7_4:-18356539 Msa1143160:CDS
AAATGTTGGTGTTGTATTAA+TGG 0.258988 7_4:-18357205 Msa1143160:CDS
GGCCAGCGAGAATTAATTAT+TGG 0.267680 7_4:-18356928 Msa1143160:CDS
CGGAAGCAGAGGACAAAATA+AGG 0.270738 7_4:-18359412 Msa1143160:CDS
GGTAGCTGGTAAATTAAAAT+TGG 0.278592 7_4:-18356281 Msa1143160:CDS
TCTCGCTGGCCACGCCCTAT+AGG 0.298734 7_4:+18356940 None:intergenic
GCCGTCGGGCTTGCTTCTAT+TGG 0.311843 7_4:-18359494 Msa1143160:CDS
GCTGCTTCTGTTATCGCTGC+TGG 0.315135 7_4:-18359521 Msa1143160:CDS
TGGAAGCTTTAACTATTTAT+GGG 0.316470 7_4:-18359361 Msa1143160:CDS
CTCGCTGGCCACGCCCTATA+GGG 0.318797 7_4:+18356941 None:intergenic
CTACTTTCCTTAAGCGGGCC+CGG 0.340021 7_4:+18357812 None:intergenic
ATTGATTCTATGATCCCTAT+AGG 0.359827 7_4:-18356955 Msa1143160:CDS
GCTGCAGGGCAAGCTGTAGA+AGG 0.363265 7_4:-18359449 Msa1143160:CDS
GCGATAAGCCTGTGCTTGTT+TGG 0.364708 7_4:+18356621 None:intergenic
GCCAGCGAGAATTAATTATT+GGG 0.365780 7_4:-18356927 Msa1143160:CDS
GGGTACTTTATTACTTAGTC+TGG 0.366228 7_4:-18359390 Msa1143160:CDS
CCTGATTGGGTCTCAACTAT+TGG 0.368964 7_4:+18356463 None:intergenic
TGGTAAATTAAAATTGGAAT+TGG 0.382867 7_4:-18356275 Msa1143160:CDS
CACAGTGAGAGGAGCTGATT+GGG 0.383779 7_4:+18356144 None:intergenic
TAATTCAATTTATACAACTT+TGG 0.388293 7_4:-18357722 Msa1143160:CDS
ATTTCTCCTCGACCATCAAT+AGG 0.391542 7_4:+18357072 None:intergenic
AATGTTGGTGTTGTATTAAT+GGG 0.391664 7_4:-18357204 Msa1143160:CDS
TCCTTATACAGGTGCAGCTC+TGG 0.392160 7_4:-18356698 Msa1143160:intron
GCCCTAGCTAAACCTATTGA+TGG 0.393369 7_4:-18357084 Msa1143160:CDS
CCAATAGTTGAGACCCAATC+AGG 0.395916 7_4:-18356463 Msa1143160:CDS
AGATACAATTCTCAATCAAC+AGG 0.401486 7_4:-18356872 Msa1143160:CDS
CCGGGATACGCTTCGCGACC+TGG 0.409309 7_4:+18356571 None:intergenic
AAGCTGAAACATCTCCTGAT+TGG 0.409535 7_4:+18356449 None:intergenic
AGAAAGCCCGGGCCCGCTTA+AGG 0.414131 7_4:-18357819 Msa1143160:CDS
GCTAAATTAAGTTCTCAGTT+AGG 0.415873 7_4:-18356508 Msa1143160:intron
GCTTCTATTGGACCTGGAGT+TGG 0.416315 7_4:-18359482 Msa1143160:CDS
CCAGTAAGTGAGGGTTATTT+GGG 0.424091 7_4:-18357120 Msa1143160:CDS
ATTATTGGGGACAGACAAAC+AGG 0.427629 7_4:-18356913 Msa1143160:CDS
TCGCTGCTGGGTTGGCCGTC+GGG 0.427770 7_4:-18359508 Msa1143160:CDS
ATCGCTGCTGGGTTGGCCGT+CGG 0.428270 7_4:-18359509 Msa1143160:CDS
AAATATTTGGCCATCTGTAA+TGG 0.434228 7_4:+18356405 None:intergenic
TTGATTCTATGATCCCTATA+GGG 0.437674 7_4:-18356954 Msa1143160:CDS
CCACAGTGAGAGGAGCTGAT+TGG 0.438205 7_4:+18356143 None:intergenic
GTAATGGAAATTACATTAGT+AGG 0.444650 7_4:+18356421 None:intergenic
CGTTTCTACTTTCCTTAAGC+GGG 0.444690 7_4:+18357807 None:intergenic
ATATGTGTTTATGTAGCTAT+TGG 0.445393 7_4:-18356838 Msa1143160:intron
GCGGATCGGTTTCGAGTGAA+TGG 0.446998 7_4:-18357781 Msa1143160:intron
TAAAGCTACGCAAAATCAAT+TGG 0.449089 7_4:-18356203 Msa1143160:CDS
TTCAAAATTCAGAAGAACTA+CGG 0.449969 7_4:-18357864 Msa1143160:CDS
GGAAGCAGCCGTTGAACAGC+TGG 0.450450 7_4:-18357842 Msa1143160:CDS
ACAAGCATTACAAGGAGCTC+TGG 0.452163 7_4:-18357617 Msa1143160:CDS
TTCGTAATAGAAGAGACATT+TGG 0.452176 7_4:+18356599 None:intergenic
AGCTGAAACATCTCCTGATT+GGG 0.452206 7_4:+18356450 None:intergenic
GGAAGTTCGGTAAAAGCAAC+AGG 0.457398 7_4:-18357159 Msa1143160:CDS
AAAAGATTAAACAAAAGGAT+TGG 0.459809 7_4:+18359310 None:intergenic
AGCTTTAACTATTTATGGGC+TGG 0.460263 7_4:-18359357 Msa1143160:CDS
CTGCTTCTGTTATCGCTGCT+GGG 0.461552 7_4:-18359520 Msa1143160:CDS
TACTTTCCTTAAGCGGGCCC+GGG 0.461743 7_4:+18357813 None:intergenic
ATAAGCCTGTGCTTGTTTGG+AGG 0.462375 7_4:+18356624 None:intergenic
CGTGTATGAGCCTCTTCAAA+CGG 0.465005 7_4:-18356989 Msa1143160:CDS
TTGAACAGCTGGAGAAAGCC+CGG 0.472109 7_4:-18357831 Msa1143160:CDS
GGAAGCAGAGGACAAAATAA+GGG 0.473459 7_4:-18359411 Msa1143160:CDS
AGAAGGGATTGCGCGACAAC+CGG 0.475077 7_4:-18359432 Msa1143160:CDS
TCGAGGAGAAATTTCAGCTT+CGG 0.476522 7_4:-18357061 Msa1143160:CDS
CCAGGTCGCGAAGCGTATCC+CGG 0.478786 7_4:-18356571 Msa1143160:CDS
GGGCTTGCTTCTATTGGACC+TGG 0.481695 7_4:-18359488 Msa1143160:CDS
TAACTGAGAACTTAATTTAG+CGG 0.485288 7_4:+18356510 None:intergenic
CGCCGATCCAACTCTGGAAA+CGG 0.485937 7_4:+18356327 None:intergenic
TATATTGCTCAATACGTTCA+CGG 0.487151 7_4:+18357376 None:intergenic
AAATTTCAGCTTCGGAATCT+CGG 0.492871 7_4:-18357053 Msa1143160:intron
GTTGGTCAAGGTACAGCTGC+AGG 0.497139 7_4:-18359464 Msa1143160:CDS
GGTGTTGTATTAATGGGTGA+TGG 0.501676 7_4:-18357198 Msa1143160:CDS
GGCTTTCTCCAGCTGTTCAA+CGG 0.504402 7_4:+18357834 None:intergenic
TCTGCCGATCTATTCAATGC+TGG 0.509351 7_4:-18356379 Msa1143160:CDS
GCTGATACAAGAGGGAAGTT+CGG 0.510716 7_4:-18357172 Msa1143160:CDS
TCAAAATTCAGAAGAACTAC+GGG 0.510719 7_4:-18357863 Msa1143160:CDS
GTGTATGAGCCTCTTCAAAC+GGG 0.511475 7_4:-18356988 Msa1143160:CDS
TTCTGTTATCGCTGCTGGGT+TGG 0.514112 7_4:-18359516 Msa1143160:CDS
TGATTAAAGTGTGACGTTCA+CGG 0.516487 7_4:+18356659 None:intergenic
CCGTTTCTACTTTCCTTAAG+CGG 0.521089 7_4:+18357806 None:intergenic
TAAGCCTGTGCTTGTTTGGA+GGG 0.526272 7_4:+18356625 None:intergenic
GAAATACCCACATTAATAGC+TGG 0.538501 7_4:+18356349 None:intergenic
CCCCAATAATTAATTCTCGC+TGG 0.539649 7_4:+18356926 None:intergenic
GACCATCAATAGGTTTAGCT+AGG 0.542268 7_4:+18357082 None:intergenic
ATTGGACCTGGAGTTGGTCA+AGG 0.543278 7_4:-18359476 Msa1143160:CDS
ATCTGTTCTTCCACAGTGAG+AGG 0.551959 7_4:+18356133 None:intergenic
TGCGCGACAACCGGAAGCAG+AGG 0.554171 7_4:-18359423 Msa1143160:CDS
AATGTAATTTCCATTACAGA+TGG 0.557336 7_4:-18356415 Msa1143160:CDS
AAAGCCATGAAACAGGTAGC+TGG 0.558354 7_4:-18356295 Msa1143160:intron
CAAGCATTACAAGGAGCTCT+GGG 0.568354 7_4:-18357616 Msa1143160:CDS
AAGTAGAAACGGAAGCGGAT+CGG 0.570689 7_4:-18357795 Msa1143160:CDS
CCGCTTAAGGAAAGTAGAAA+CGG 0.573518 7_4:-18357806 Msa1143160:CDS
CGATCCCTCCAAACAAGCAC+AGG 0.574680 7_4:-18356629 Msa1143160:CDS
TGAACAGCTGGAGAAAGCCC+GGG 0.575165 7_4:-18357830 Msa1143160:CDS
TGCTCAGATACCAGTAAGTG+AGG 0.577261 7_4:-18357130 Msa1143160:CDS
TGAATTAGTCGAATTTGAAG+AGG 0.580561 7_4:-18357262 Msa1143160:CDS
CTGCAGGGCAAGCTGTAGAA+GGG 0.582070 7_4:-18359448 Msa1143160:CDS
GCAATAAGTCCCGTTTGAAG+AGG 0.589598 7_4:+18356979 None:intergenic
ACAGGTACTGTACTTCAAGT+AGG 0.592569 7_4:-18357330 Msa1143160:CDS
GCTGTACCTTGACCAACTCC+AGG 0.593501 7_4:+18359470 None:intergenic
GAATTTGAAGAGGGTACTGT+AGG 0.593991 7_4:-18357252 Msa1143160:CDS
CGATTAATCAAGTGCAACAG+AGG 0.596922 7_4:-18357648 Msa1143160:CDS
CTTCTATTACGAAGACCACC+AGG 0.597315 7_4:-18356589 Msa1143160:CDS
ACCATCAATAGGTTTAGCTA+GGG 0.601516 7_4:+18357083 None:intergenic
ATCAGACCAGCTATTAATGT+GGG 0.604091 7_4:-18356355 Msa1143160:CDS
GAGTTACATTTACGTACGAT+CGG 0.617220 7_4:-18357568 Msa1143160:intron
GAATTAGTCGAATTTGAAGA+GGG 0.619600 7_4:-18357261 Msa1143160:CDS
GCTAAACCTATTGATGGTCG+AGG 0.620970 7_4:-18357078 Msa1143160:CDS
AAGGAAAGTAGAAACGGAAG+CGG 0.622485 7_4:-18357800 Msa1143160:CDS
AATCAGACCAGCTATTAATG+TGG 0.625394 7_4:-18356356 Msa1143160:CDS
GATTCCAGCATTGAATAGAT+CGG 0.626418 7_4:+18356375 None:intergenic
TCTATGATCCCTATAGGGCG+TGG 0.628110 7_4:-18356949 Msa1143160:CDS
CCAGCGAGAATTAATTATTG+GGG 0.636830 7_4:-18356926 Msa1143160:CDS
TCCAATAGAAGCAAGCCCGA+CGG 0.638086 7_4:+18359493 None:intergenic
ACAGAAGCAGCAGAAATCAG+TGG 0.640161 7_4:+18359533 None:intergenic
TTGGTCAAGGTACAGCTGCA+GGG 0.643472 7_4:-18359463 Msa1143160:CDS
GATTAATCAAGTGCAACAGA+GGG 0.644246 7_4:-18357647 Msa1143160:CDS
ACGCAAAATCAATTGGCAAG+AGG 0.645378 7_4:-18356196 Msa1143160:CDS
CGTTTGAAGAGGCTCATACA+CGG 0.655862 7_4:+18356990 None:intergenic
GAAGCAGAGGACAAAATAAG+GGG 0.658398 7_4:-18359410 Msa1143160:CDS
GATGGTTTGCTGATACAAGA+GGG 0.671964 7_4:-18357180 Msa1143160:CDS
GCTCAGATACCAGTAAGTGA+GGG 0.673181 7_4:-18357129 Msa1143160:CDS
TGATGGTTTGCTGATACAAG+AGG 0.676056 7_4:-18357181 Msa1143160:CDS
ACTGTACTTCAAGTAGGCGA+CGG 0.682410 7_4:-18357324 Msa1143160:CDS
GGATACGCTTCGCGACCTGG+TGG 0.699302 7_4:+18356574 None:intergenic
GATACAATTCTCAATCAACA+GGG 0.744742 7_4:-18356871 Msa1143160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAAAGATTAAACAAA+AGG + chr7_4:18355970-18355989 None:intergenic 10.0%
!! TCAATTCTAAATTAAATAAA+GGG + chr7_4:18356192-18356211 None:intergenic 10.0%
!! TTCAATTCTAAATTAAATAA+AGG + chr7_4:18356193-18356212 None:intergenic 10.0%
!! ACTAATTATGAATATAATAA+AGG + chr7_4:18359419-18359438 None:intergenic 10.0%
!! AATTCTAAATTAAATAAAGG+GGG + chr7_4:18356190-18356209 None:intergenic 15.0%
!! CAATTCTAAATTAAATAAAG+GGG + chr7_4:18356191-18356210 None:intergenic 15.0%
!! AATCAAAAAATCAAAAAACT+GGG - chr7_4:18356455-18356474 Msa1143160:CDS 15.0%
!!! TGTATTAATTTTTTTTGGAA+AGG - chr7_4:18356641-18356660 Msa1143160:CDS 15.0%
!!! GTATTAATTTTTTTTGGAAA+GGG - chr7_4:18356642-18356661 Msa1143160:CDS 15.0%
!! ATAAATTAATCAGAATTCTT+TGG - chr7_4:18357081-18357100 Msa1143160:CDS 15.0%
!! CAATACAAGATTAAAATATT+TGG + chr7_4:18357163-18357182 None:intergenic 15.0%
!!! CAAATATTTTAATCTTGTAT+TGG - chr7_4:18357161-18357180 Msa1143160:CDS 15.0%
!! TAATTCAATTTATACAACTT+TGG - chr7_4:18357550-18357569 Msa1143160:intron 15.0%
!! TTCAAATTAAGAAATATTCA+TGG - chr7_4:18357839-18357858 Msa1143160:CDS 15.0%
!!! TGTATTTACAATTTTTACTT+CGG + chr7_4:18357925-18357944 None:intergenic 15.0%
!! AAAAGATTAAACAAAAGGAT+TGG + chr7_4:18355965-18355984 None:intergenic 20.0%
!! ATAAATTGTAGGAGTTAAAT+CGG + chr7_4:18356105-18356124 None:intergenic 20.0%
!! TAGATTCTATATTCTCTAAT+TGG + chr7_4:18356293-18356312 None:intergenic 20.0%
!! GAATCAAAAAATCAAAAAAC+TGG - chr7_4:18356454-18356473 Msa1143160:CDS 20.0%
!!! TAGATTTGTTGCTAAAATAT+CGG + chr7_4:18356598-18356617 None:intergenic 20.0%
!!! CTAGGTGTATTAATTTTTTT+TGG - chr7_4:18356636-18356655 Msa1143160:CDS 20.0%
!! GTTTATTTCAAAGAATAGAT+TGG - chr7_4:18356679-18356698 Msa1143160:CDS 20.0%
!! ATTCTGATTAATTTATACGT+AGG + chr7_4:18357077-18357096 None:intergenic 20.0%
!! TACAAGATTAAAATATTTGG+AGG + chr7_4:18357160-18357179 None:intergenic 20.0%
!! GAAGTAAAAATTGTAAATAC+AGG - chr7_4:18357924-18357943 Msa1143160:CDS 20.0%
!! ATGTAAATAAAAAACATCTC+CGG + chr7_4:18358723-18358742 None:intergenic 20.0%
!! TGGTAAATTAAAATTGGAAT+TGG - chr7_4:18358997-18359016 Msa1143160:intron 20.0%
!! CAGATAATAACTATTTATAC+TGG - chr7_4:18359157-18359176 Msa1143160:intron 20.0%
!! GATATGATTTCGTTAAATTT+AGG + chr7_4:18359268-18359287 None:intergenic 20.0%
!! ATGGAAGCTTTAACTATTTA+TGG - chr7_4:18355910-18355929 Msa1143160:intron 25.0%
!! TGGAAGCTTTAACTATTTAT+GGG - chr7_4:18355911-18355930 Msa1143160:intron 25.0%
!!! AATACATATTGTTTTTTCCG+TGG - chr7_4:18356004-18356023 Msa1143160:intron 25.0%
! CCTACAATTTATTCTTCATT+CGG - chr7_4:18356113-18356132 Msa1143160:intron 25.0%
!! AAAATTAGTCTATCCATAAG+AGG - chr7_4:18356490-18356509 Msa1143160:intron 25.0%
! AATGAAGCAAAGAAAAGAAT+CGG + chr7_4:18356541-18356560 None:intergenic 25.0%
!! TATAATGAAAAAAGTGCAGT+TGG + chr7_4:18356711-18356730 None:intergenic 25.0%
! TTTCTACCACTATGTTAATA+CGG - chr7_4:18356925-18356944 Msa1143160:CDS 25.0%
! TTCTCTTTACGATGAAAAAT+AGG - chr7_4:18356999-18357018 Msa1143160:intron 25.0%
! TTTGCTGACAATTATTTGTT+TGG - chr7_4:18357124-18357143 Msa1143160:CDS 25.0%
! TGTTTAGAAATAGAGAAAAG+AGG - chr7_4:18357199-18357218 Msa1143160:CDS 25.0%
! CTCATTCGATAATAAAGATA+GGG - chr7_4:18357227-18357246 Msa1143160:CDS 25.0%
! CATGAATCTTTCAATTCATT+TGG + chr7_4:18357283-18357302 None:intergenic 25.0%
! TGAATTGAAAGATTCATGTT+TGG - chr7_4:18357285-18357304 Msa1143160:intron 25.0%
! TTCAAAATTCAGAAGAACTA+CGG - chr7_4:18357408-18357427 Msa1143160:intron 25.0%
!! GATTCATTTTGAACAACAAA+GGG - chr7_4:18357601-18357620 Msa1143160:CDS 25.0%
! GTGCTAATATTGATATGTTT+GGG - chr7_4:18357726-18357745 Msa1143160:CDS 25.0%
! TGCTAATATTGATATGTTTG+GGG - chr7_4:18357727-18357746 Msa1143160:CDS 25.0%
! TCTACTAGAATATAGAGTAT+AGG - chr7_4:18357781-18357800 Msa1143160:intron 25.0%
!!! TGAATTTGATTCTTTTTCGA+AGG + chr7_4:18357823-18357842 None:intergenic 25.0%
!! AATTTGGAATCCAAAAATGT+TGG - chr7_4:18358053-18358072 Msa1143160:intron 25.0%
!! TAATACAACACCAACATTTT+TGG + chr7_4:18358066-18358085 None:intergenic 25.0%
!!! AAATGTTGGTGTTGTATTAA+TGG - chr7_4:18358067-18358086 Msa1143160:intron 25.0%
!!! AATGTTGGTGTTGTATTAAT+GGG - chr7_4:18358068-18358087 Msa1143160:intron 25.0%
! ATATGTGTTTATGTAGCTAT+TGG - chr7_4:18358434-18358453 Msa1143160:intron 25.0%
! TAACTACTTTACAAGAAAGA+GGG - chr7_4:18358486-18358505 Msa1143160:intron 25.0%
! TGTAAATAAAAAACATCTCC+GGG + chr7_4:18358722-18358741 None:intergenic 25.0%
!! TTATTTACATTCTCGTCTTT+TGG - chr7_4:18358733-18358752 Msa1143160:intron 25.0%
! TAACTGAGAACTTAATTTAG+CGG + chr7_4:18358765-18358784 None:intergenic 25.0%
!! GTAATGGAAATTACATTAGT+AGG + chr7_4:18358854-18358873 None:intergenic 25.0%
! AATGTAATTTCCATTACAGA+TGG - chr7_4:18358857-18358876 Msa1143160:intron 25.0%
! TGATTCATTAGAAATTGATC+AGG - chr7_4:18359195-18359214 Msa1143160:intron 25.0%
! TAAATTTCTCGTTGAGTTAA+GGG - chr7_4:18359222-18359241 Msa1143160:intron 25.0%
!!! ATTACTTAGTCTGGCTTTTA+TGG - chr7_4:18355891-18355910 Msa1143160:intron 30.0%
CCGAATGAAGAATAAATTGT+AGG + chr7_4:18356116-18356135 None:intergenic 30.0%
AACTAGTATCTACTTCTAAG+AGG - chr7_4:18356243-18356262 Msa1143160:CDS 30.0%
!! TAAGAGGTATCGTTCTTATA+GGG - chr7_4:18356259-18356278 Msa1143160:CDS 30.0%
! CTTTTCTTTGCTTCATTTAC+TGG - chr7_4:18356544-18356563 Msa1143160:CDS 30.0%
ATAAATCTAAGTGTAGTGCT+AGG - chr7_4:18356618-18356637 Msa1143160:CDS 30.0%
! TCTCTATCAACCAAGAATTT+TGG - chr7_4:18356847-18356866 Msa1143160:CDS 30.0%
CAATTTCCGTATTAACATAG+TGG + chr7_4:18356934-18356953 None:intergenic 30.0%
CACTATGTTAATACGGAAAT+TGG - chr7_4:18356932-18356951 Msa1143160:CDS 30.0%
CGATGAAAAATAGGAAAAAC+AGG - chr7_4:18357008-18357027 Msa1143160:intron 30.0%
TCAATTCCGCATTGTATAAA+AGG + chr7_4:18357051-18357070 None:intergenic 30.0%
AGAAATAGAGAAAAGAGGAT+AGG - chr7_4:18357204-18357223 Msa1143160:CDS 30.0%
GCTCATTCGATAATAAAGAT+AGG - chr7_4:18357226-18357245 Msa1143160:CDS 30.0%
AGATAGGGAAATTTCCTATA+CGG - chr7_4:18357242-18357261 Msa1143160:CDS 30.0%
TGAAAGATTCATGTTTGGTT+CGG - chr7_4:18357290-18357309 Msa1143160:intron 30.0%
TCAAAATTCAGAAGAACTAC+GGG - chr7_4:18357409-18357428 Msa1143160:intron 30.0%
! CAATTTTTCTCGTTCTATCT+CGG + chr7_4:18357522-18357541 None:intergenic 30.0%
! CGATTCATTTTGAACAACAA+AGG - chr7_4:18357600-18357619 Msa1143160:CDS 30.0%
! GTTTTACAACAAGCATTACA+AGG - chr7_4:18357647-18357666 Msa1143160:CDS 30.0%
GGTGCTAATATTGATATGTT+TGG - chr7_4:18357725-18357744 Msa1143160:CDS 30.0%
TATATTGCTCAATACGTTCA+CGG + chr7_4:18357899-18357918 None:intergenic 30.0%
! TTATGGTCTTGATGAAGTAA+TGG - chr7_4:18357983-18358002 Msa1143160:intron 30.0%
TGAATTAGTCGAATTTGAAG+AGG - chr7_4:18358010-18358029 Msa1143160:intron 30.0%
GAATTAGTCGAATTTGAAGA+GGG - chr7_4:18358011-18358030 Msa1143160:intron 30.0%
! ATTGATTCTATGATCCCTAT+AGG - chr7_4:18358317-18358336 Msa1143160:intron 30.0%
TTGATTCTATGATCCCTATA+GGG - chr7_4:18358318-18358337 Msa1143160:intron 30.0%
AGATACAATTCTCAATCAAC+AGG - chr7_4:18358400-18358419 Msa1143160:intron 30.0%
GATACAATTCTCAATCAACA+GGG - chr7_4:18358401-18358420 Msa1143160:intron 30.0%
GTAACTACTTTACAAGAAAG+AGG - chr7_4:18358485-18358504 Msa1143160:intron 30.0%
AACTACTTTACAAGAAAGAG+GGG - chr7_4:18358487-18358506 Msa1143160:intron 30.0%
AATGGAGTACACTATTATAG+TGG - chr7_4:18358511-18358530 Msa1143160:intron 30.0%
TTCGTAATAGAAGAGACATT+TGG + chr7_4:18358676-18358695 None:intergenic 30.0%
GCTAAATTAAGTTCTCAGTT+AGG - chr7_4:18358764-18358783 Msa1143160:intron 30.0%
AAATATTTGGCCATCTGTAA+TGG + chr7_4:18358870-18358889 None:intergenic 30.0%
GATCGGCAGATAAAAATATT+TGG + chr7_4:18358883-18358902 None:intergenic 30.0%
TCAAATTAAAGCCATGAAAC+AGG - chr7_4:18358970-18358989 Msa1143160:intron 30.0%
GGTAGCTGGTAAATTAAAAT+TGG - chr7_4:18358991-18359010 Msa1143160:intron 30.0%
TAAAGCTACGCAAAATCAAT+TGG - chr7_4:18359069-18359088 Msa1143160:intron 30.0%
ACTATTTATACTGGAACGAA+TGG - chr7_4:18359166-18359185 Msa1143160:intron 30.0%
GTAAATTTCTCGTTGAGTTA+AGG - chr7_4:18359221-18359240 Msa1143160:intron 30.0%
GGGTACTTTATTACTTAGTC+TGG - chr7_4:18355882-18355901 Msa1143160:intron 35.0%
! AGCTTTAACTATTTATGGGC+TGG - chr7_4:18355915-18355934 Msa1143160:intron 35.0%
CATTGGACTAAATAAAGGGA+CGG + chr7_4:18356163-18356182 None:intergenic 35.0%
CGCTCATTGGACTAAATAAA+GGG + chr7_4:18356167-18356186 None:intergenic 35.0%
!! CTAAGAGGTATCGTTCTTAT+AGG - chr7_4:18356258-18356277 Msa1143160:CDS 35.0%
! ATGAAAAAAGTGCAGTTGGT+TGG + chr7_4:18356707-18356726 None:intergenic 35.0%
TTTAGTAAGAAGTCATTCGC+CGG + chr7_4:18356754-18356773 None:intergenic 35.0%
! TGGTAATGCTCCAAAATTCT+TGG + chr7_4:18356860-18356879 None:intergenic 35.0%
!!! AGAATTTTGGAGCATTACCA+TGG - chr7_4:18356860-18356879 Msa1143160:CDS 35.0%
!! AAACTGGTTAGCTTTAACCA+TGG + chr7_4:18356880-18356899 None:intergenic 35.0%
ATTGCGTCTAAACTTCAAAC+TGG + chr7_4:18356896-18356915 None:intergenic 35.0%
ATTCCGCATTGTATAAAAGG+AGG + chr7_4:18357048-18357067 None:intergenic 35.0%
! GAAAGATTCATGTTTGGTTC+GGG - chr7_4:18357291-18357310 Msa1143160:intron 35.0%
GATTAATCAAGTGCAACAGA+GGG - chr7_4:18357625-18357644 Msa1143160:CDS 35.0%
GAGTTACATTTACGTACGAT+CGG - chr7_4:18357704-18357723 Msa1143160:CDS 35.0%
ACTAATTTCATCTGCACGAA+TGG + chr7_4:18357868-18357887 None:intergenic 35.0%
! TGTAGGCATTGCTTTGAATT+TGG - chr7_4:18358037-18358056 Msa1143160:intron 35.0%
ACCATCAATAGGTTTAGCTA+GGG + chr7_4:18358192-18358211 None:intergenic 35.0%
AAATTTCAGCTTCGGAATCT+CGG - chr7_4:18358219-18358238 Msa1143160:intron 35.0%
GCCAGCGAGAATTAATTATT+GGG - chr7_4:18358345-18358364 Msa1143160:intron 35.0%
CCAGCGAGAATTAATTATTG+GGG - chr7_4:18358346-18358365 Msa1143160:intron 35.0%
TGATTAAAGTGTGACGTTCA+CGG + chr7_4:18358616-18358635 None:intergenic 35.0%
TTAAGTTCTCAGTTAGGTGA+AGG - chr7_4:18358770-18358789 Msa1143160:intron 35.0%
! GATTCCAGCATTGAATAGAT+CGG + chr7_4:18358900-18358919 None:intergenic 35.0%
AATCAGACCAGCTATTAATG+TGG - chr7_4:18358916-18358935 Msa1143160:intron 35.0%
ATCAGACCAGCTATTAATGT+GGG - chr7_4:18358917-18358936 Msa1143160:intron 35.0%
GAAATACCCACATTAATAGC+TGG + chr7_4:18358926-18358945 None:intergenic 35.0%
CTGAATAGCTTCCTTCAAAA+GGG + chr7_4:18359323-18359342 None:intergenic 35.0%
! GATGGAACTCTTTTTACTTC+AGG - chr7_4:18359348-18359367 Msa1143160:CDS 35.0%
!!! CTTATTTTGTCCTCTGCTTC+CGG + chr7_4:18355862-18355881 None:intergenic 40.0%
GGAAGCAGAGGACAAAATAA+GGG - chr7_4:18355861-18355880 Msa1143160:intron 40.0%
GAAGCAGAGGACAAAATAAG+GGG - chr7_4:18355862-18355881 Msa1143160:intron 40.0%
ATAGCAGCAATGAAAGTCCA+CGG + chr7_4:18356024-18356043 None:intergenic 40.0%
CTAAATAAAGGGACGGAAGA+AGG + chr7_4:18356156-18356175 None:intergenic 40.0%
GCGCTCATTGGACTAAATAA+AGG + chr7_4:18356168-18356187 None:intergenic 40.0%
TATGATCGCATCTCCTCTTA+TGG + chr7_4:18356506-18356525 None:intergenic 40.0%
CTAGAAAAACGTGCATGATC+CGG - chr7_4:18356732-18356751 Msa1143160:intron 40.0%
CAATGAATCGCGAAATGCTA+TGG + chr7_4:18356811-18356830 None:intergenic 40.0%
CATAGCATTTCGCGATTCAT+TGG - chr7_4:18356809-18356828 Msa1143160:intron 40.0%
! ACGCCTCCTTTTATACAATG+CGG - chr7_4:18357042-18357061 Msa1143160:intron 40.0%
TCTCACACTCAATTCCGTAT+AGG + chr7_4:18357259-18357278 None:intergenic 40.0%
CGTTTCTACTTTCCTTAAGC+GGG + chr7_4:18357468-18357487 None:intergenic 40.0%
CCGTTTCTACTTTCCTTAAG+CGG + chr7_4:18357469-18357488 None:intergenic 40.0%
CCGCTTAAGGAAAGTAGAAA+CGG - chr7_4:18357466-18357485 Msa1143160:intron 40.0%
AAGGAAAGTAGAAACGGAAG+CGG - chr7_4:18357472-18357491 Msa1143160:intron 40.0%
CGATTAATCAAGTGCAACAG+AGG - chr7_4:18357624-18357643 Msa1143160:CDS 40.0%
! ACAGGTACTGTACTTCAAGT+AGG - chr7_4:18357942-18357961 Msa1143160:CDS 40.0%
!! GAATTTGAAGAGGGTACTGT+AGG - chr7_4:18358020-18358039 Msa1143160:intron 40.0%
! GGTGTTGTATTAATGGGTGA+TGG - chr7_4:18358074-18358093 Msa1143160:intron 40.0%
!! TGATGGTTTGCTGATACAAG+AGG - chr7_4:18358091-18358110 Msa1143160:intron 40.0%
!! GATGGTTTGCTGATACAAGA+GGG - chr7_4:18358092-18358111 Msa1143160:intron 40.0%
ACCAGTAAGTGAGGGTTATT+TGG - chr7_4:18358151-18358170 Msa1143160:intron 40.0%
CCAGTAAGTGAGGGTTATTT+GGG - chr7_4:18358152-18358171 Msa1143160:intron 40.0%
GACCATCAATAGGTTTAGCT+AGG + chr7_4:18358193-18358212 None:intergenic 40.0%
ATTTCTCCTCGACCATCAAT+AGG + chr7_4:18358203-18358222 None:intergenic 40.0%
TCGAGGAGAAATTTCAGCTT+CGG - chr7_4:18358211-18358230 Msa1143160:intron 40.0%
GAACGTCTGGAAATAATACC+GGG + chr7_4:18358263-18358282 None:intergenic 40.0%
GGAACGTCTGGAAATAATAC+CGG + chr7_4:18358264-18358283 None:intergenic 40.0%
GGCCAGCGAGAATTAATTAT+TGG - chr7_4:18358344-18358363 Msa1143160:intron 40.0%
CCCCAATAATTAATTCTCGC+TGG + chr7_4:18358349-18358368 None:intergenic 40.0%
ATTATTGGGGACAGACAAAC+AGG - chr7_4:18358359-18358378 Msa1143160:intron 40.0%
!! TGGTCAAAAAGCATCTTCTG+TGG - chr7_4:18358454-18358473 Msa1143160:intron 40.0%
TTTACAAGAAAGAGGGGCAA+TGG - chr7_4:18358493-18358512 Msa1143160:intron 40.0%
AGCTGAAACATCTCCTGATT+GGG + chr7_4:18358825-18358844 None:intergenic 40.0%
AAGCTGAAACATCTCCTGAT+TGG + chr7_4:18358826-18358845 None:intergenic 40.0%
TTTACCAGCTACCTGTTTCA+TGG + chr7_4:18358984-18359003 None:intergenic 40.0%
ACGCAAAATCAATTGGCAAG+AGG - chr7_4:18359076-18359095 Msa1143160:intron 40.0%
TCTTCTACCAAGACATTCAC+TGG - chr7_4:18359286-18359305 Msa1143160:intron 40.0%
CTTCTACCAAGACATTCACT+GGG - chr7_4:18359287-18359306 Msa1143160:intron 40.0%
TTCTACCAAGACATTCACTG+GGG - chr7_4:18359288-18359307 Msa1143160:intron 40.0%
CCTGAATAGCTTCCTTCAAA+AGG + chr7_4:18359324-18359343 None:intergenic 40.0%
!! CCTTTTGAAGGAAGCTATTC+AGG - chr7_4:18359321-18359340 Msa1143160:intron 40.0%
ACAGAAGCAGCAGAAATCAG+TGG + chr7_4:18355742-18355761 None:intergenic 45.0%
CGGAAGCAGAGGACAAAATA+AGG - chr7_4:18355860-18355879 Msa1143160:intron 45.0%
!! TAAATAAAGGGGGCGCTCAT+TGG + chr7_4:18356180-18356199 None:intergenic 45.0%
GGTATCAAACCCGAAACTTC+CGG + chr7_4:18356577-18356596 None:intergenic 45.0%
AAGTAGAAACGGAAGCGGAT+CGG - chr7_4:18357477-18357496 Msa1143160:intron 45.0%
ACAAGCATTACAAGGAGCTC+TGG - chr7_4:18357655-18357674 Msa1143160:CDS 45.0%
CAAGCATTACAAGGAGCTCT+GGG - chr7_4:18357656-18357675 Msa1143160:CDS 45.0%
ACTGTACTTCAAGTAGGCGA+CGG - chr7_4:18357948-18357967 Msa1143160:CDS 45.0%
GACGGCATTGCTCGTATTTA+TGG - chr7_4:18357966-18357985 Msa1143160:intron 45.0%
GGTCTTGATGAAGTAATGGC+AGG - chr7_4:18357987-18358006 Msa1143160:intron 45.0%
GCTGATACAAGAGGGAAGTT+CGG - chr7_4:18358100-18358119 Msa1143160:intron 45.0%
GGAAGTTCGGTAAAAGCAAC+AGG - chr7_4:18358113-18358132 Msa1143160:intron 45.0%
TGCTCAGATACCAGTAAGTG+AGG - chr7_4:18358142-18358161 Msa1143160:intron 45.0%
GCTCAGATACCAGTAAGTGA+GGG - chr7_4:18358143-18358162 Msa1143160:intron 45.0%
CCCAAATAACCCTCACTTAC+TGG + chr7_4:18358155-18358174 None:intergenic 45.0%
GCCCTAGCTAAACCTATTGA+TGG - chr7_4:18358188-18358207 Msa1143160:intron 45.0%
! GCTAAACCTATTGATGGTCG+AGG - chr7_4:18358194-18358213 Msa1143160:intron 45.0%
TCTGGAAATAATACCGGGAG+CGG + chr7_4:18358258-18358277 None:intergenic 45.0%
CGTTTGAAGAGGCTCATACA+CGG + chr7_4:18358285-18358304 None:intergenic 45.0%
CGTGTATGAGCCTCTTCAAA+CGG - chr7_4:18358283-18358302 Msa1143160:intron 45.0%
GTGTATGAGCCTCTTCAAAC+GGG - chr7_4:18358284-18358303 Msa1143160:intron 45.0%
GCAATAAGTCCCGTTTGAAG+AGG + chr7_4:18358296-18358315 None:intergenic 45.0%
!! GCGAGGTATTGTAATGTAGC+TGG + chr7_4:18358554-18358573 None:intergenic 45.0%
CAATACCTCGCTCCTTATAC+AGG - chr7_4:18358563-18358582 Msa1143160:intron 45.0%
TAAGCCTGTGCTTGTTTGGA+GGG + chr7_4:18358650-18358669 None:intergenic 45.0%
ATAAGCCTGTGCTTGTTTGG+AGG + chr7_4:18358651-18358670 None:intergenic 45.0%
CTTCTATTACGAAGACCACC+AGG - chr7_4:18358683-18358702 Msa1143160:intron 45.0%
CCTGATTGGGTCTCAACTAT+TGG + chr7_4:18358812-18358831 None:intergenic 45.0%
CCAATAGTTGAGACCCAATC+AGG - chr7_4:18358809-18358828 Msa1143160:intron 45.0%
TCTGCCGATCTATTCAATGC+TGG - chr7_4:18358893-18358912 Msa1143160:intron 45.0%
GGTATTTCCGTTTCCAGAGT+TGG - chr7_4:18358938-18358957 Msa1143160:intron 45.0%
TTCCGTTTCCAGAGTTGGAT+CGG - chr7_4:18358943-18358962 Msa1143160:intron 45.0%
AAAGCCATGAAACAGGTAGC+TGG - chr7_4:18358977-18358996 Msa1143160:intron 45.0%
ATCTGTTCTTCCACAGTGAG+AGG + chr7_4:18359142-18359161 None:intergenic 45.0%
GGAAGCTATTCAGGAACAGA+TGG - chr7_4:18359330-18359349 Msa1143160:CDS 45.0%
CTGCTTCTGTTATCGCTGCT+GGG - chr7_4:18355752-18355771 Msa1143160:intron 50.0%
TTCTGTTATCGCTGCTGGGT+TGG - chr7_4:18355756-18355775 Msa1143160:intron 50.0%
TCCAATAGAAGCAAGCCCGA+CGG + chr7_4:18355782-18355801 None:intergenic 50.0%
GCTTCTATTGGACCTGGAGT+TGG - chr7_4:18355790-18355809 Msa1143160:intron 50.0%
! ATTGGACCTGGAGTTGGTCA+AGG - chr7_4:18355796-18355815 Msa1143160:intron 50.0%
TTGGTCAAGGTACAGCTGCA+GGG - chr7_4:18355809-18355828 Msa1143160:intron 50.0%
TTCATTTACTGGCCATCCGC+CGG - chr7_4:18356555-18356574 Msa1143160:CDS 50.0%
ATCAAACCCGAAACTTCCGG+CGG + chr7_4:18356574-18356593 None:intergenic 50.0%
GGCTTTCTCCAGCTGTTCAA+CGG + chr7_4:18357441-18357460 None:intergenic 50.0%
TTGAACAGCTGGAGAAAGCC+CGG - chr7_4:18357441-18357460 Msa1143160:intron 50.0%
TTAATCGAATCTCCCGCTCC+CGG - chr7_4:18358242-18358261 Msa1143160:intron 50.0%
CTGGAAATAATACCGGGAGC+GGG + chr7_4:18358257-18358276 None:intergenic 50.0%
TCTATGATCCCTATAGGGCG+TGG - chr7_4:18358323-18358342 Msa1143160:intron 50.0%
AGCATCTTCTGTGGCTCAAG+TGG - chr7_4:18358463-18358482 Msa1143160:intron 50.0%
TCCTTATACAGGTGCAGCTC+TGG - chr7_4:18358574-18358593 Msa1143160:intron 50.0%
GCGATAAGCCTGTGCTTGTT+TGG + chr7_4:18358654-18358673 None:intergenic 50.0%
CACAGTGAGAGGAGCTGATT+GGG + chr7_4:18359131-18359150 None:intergenic 50.0%
TGCTTCCCCAGTGAATGTCT+TGG + chr7_4:18359296-18359315 None:intergenic 50.0%
! GGAAGCAGAAGCCCTTTTGA+AGG - chr7_4:18359309-18359328 Msa1143160:intron 50.0%
GCTGCTTCTGTTATCGCTGC+TGG - chr7_4:18355751-18355770 Msa1143160:intron 55.0%
! GGGCTTGCTTCTATTGGACC+TGG - chr7_4:18355784-18355803 Msa1143160:intron 55.0%
GCTGTACCTTGACCAACTCC+AGG + chr7_4:18355805-18355824 None:intergenic 55.0%
GTTGGTCAAGGTACAGCTGC+AGG - chr7_4:18355808-18355827 Msa1143160:intron 55.0%
CTGCAGGGCAAGCTGTAGAA+GGG - chr7_4:18355824-18355843 Msa1143160:intron 55.0%
AGAAGGGATTGCGCGACAAC+CGG - chr7_4:18355840-18355859 Msa1143160:intron 55.0%
TGAACAGCTGGAGAAAGCCC+GGG - chr7_4:18357442-18357461 Msa1143160:intron 55.0%
TACTTTCCTTAAGCGGGCCC+GGG + chr7_4:18357462-18357481 None:intergenic 55.0%
CTACTTTCCTTAAGCGGGCC+CGG + chr7_4:18357463-18357482 None:intergenic 55.0%
! GCGGATCGGTTTCGAGTGAA+TGG - chr7_4:18357491-18357510 Msa1143160:intron 55.0%
AGGCTCATACACGGAACGTC+TGG + chr7_4:18358276-18358295 None:intergenic 55.0%
CTGCACCTGTATAAGGAGCG+AGG + chr7_4:18358571-18358590 None:intergenic 55.0%
GCCAGAGCTGCACCTGTATA+AGG + chr7_4:18358578-18358597 None:intergenic 55.0%
CGATCCCTCCAAACAAGCAC+AGG - chr7_4:18358643-18358662 Msa1143160:intron 55.0%
! CGCCGATCCAACTCTGGAAA+CGG + chr7_4:18358948-18358967 None:intergenic 55.0%
CGTTTCCAGAGTTGGATCGG+CGG - chr7_4:18358946-18358965 Msa1143160:intron 55.0%
CCACAGTGAGAGGAGCTGAT+TGG + chr7_4:18359132-18359151 None:intergenic 55.0%
CCAATCAGCTCCTCTCACTG+TGG - chr7_4:18359129-18359148 Msa1143160:intron 55.0%
! GCCGTCGGGCTTGCTTCTAT+TGG - chr7_4:18355778-18355797 Msa1143160:intron 60.0%
GCTGCAGGGCAAGCTGTAGA+AGG - chr7_4:18355823-18355842 Msa1143160:intron 60.0%
TGGCCATCCGCCGGAAGTTT+CGG - chr7_4:18356564-18356583 Msa1143160:CDS 60.0%
AACCCGAAACTTCCGGCGGA+TGG + chr7_4:18356570-18356589 None:intergenic 60.0%
GGAAGCAGCCGTTGAACAGC+TGG - chr7_4:18357430-18357449 Msa1143160:intron 60.0%
TTGAGCCGCCGATCCAACTC+TGG + chr7_4:18358954-18358973 None:intergenic 60.0%
!! ATCGCTGCTGGGTTGGCCGT+CGG - chr7_4:18355763-18355782 Msa1143160:intron 65.0%
TGCGCGACAACCGGAAGCAG+AGG - chr7_4:18355849-18355868 Msa1143160:intron 65.0%
GGCCATCCGCCGGAAGTTTC+GGG - chr7_4:18356565-18356584 Msa1143160:CDS 65.0%
AGAAAGCCCGGGCCCGCTTA+AGG - chr7_4:18357453-18357472 Msa1143160:intron 65.0%
CTCGCTGGCCACGCCCTATA+GGG + chr7_4:18358334-18358353 None:intergenic 65.0%
TCTCGCTGGCCACGCCCTAT+AGG + chr7_4:18358335-18358354 None:intergenic 65.0%
GGATACGCTTCGCGACCTGG+TGG + chr7_4:18358701-18358720 None:intergenic 65.0%
CCAGGTCGCGAAGCGTATCC+CGG - chr7_4:18358701-18358720 Msa1143160:intron 65.0%
!! TCGCTGCTGGGTTGGCCGTC+GGG - chr7_4:18355764-18355783 Msa1143160:intron 70.0%
CCGGGATACGCTTCGCGACC+TGG + chr7_4:18358704-18358723 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 18355733 18359561 18355733 ID=Msa1143160;Name=Msa1143160
chr7_4 mRNA 18355733 18359561 18355733 ID=Msa1143160-mRNA-1;Parent=Msa1143160;Name=Msa1143160-mRNA-1;_AED=0.45;_eAED=0.45;_QI=0|0|0|0.9|0|0|10|0|556
chr7_4 exon 18359322 18359561 18359322 ID=Msa1143160-mRNA-1:exon:4099;Parent=Msa1143160-mRNA-1
chr7_4 exon 18357782 18357968 18357782 ID=Msa1143160-mRNA-1:exon:4098;Parent=Msa1143160-mRNA-1
chr7_4 exon 18357569 18357766 18357569 ID=Msa1143160-mRNA-1:exon:4097;Parent=Msa1143160-mRNA-1
chr7_4 exon 18357316 18357417 18357316 ID=Msa1143160-mRNA-1:exon:4096;Parent=Msa1143160-mRNA-1
chr7_4 exon 18357054 18357285 18357054 ID=Msa1143160-mRNA-1:exon:4095;Parent=Msa1143160-mRNA-1
chr7_4 exon 18356839 18357017 18356839 ID=Msa1143160-mRNA-1:exon:4094;Parent=Msa1143160-mRNA-1
chr7_4 exon 18356509 18356709 18356509 ID=Msa1143160-mRNA-1:exon:4093;Parent=Msa1143160-mRNA-1
chr7_4 exon 18356339 18356502 18356339 ID=Msa1143160-mRNA-1:exon:4092;Parent=Msa1143160-mRNA-1
chr7_4 exon 18356147 18356302 18356147 ID=Msa1143160-mRNA-1:exon:4091;Parent=Msa1143160-mRNA-1
chr7_4 exon 18355733 18355744 18355733 ID=Msa1143160-mRNA-1:exon:4090;Parent=Msa1143160-mRNA-1
chr7_4 CDS 18359322 18359561 18359322 ID=Msa1143160-mRNA-1:cds;Parent=Msa1143160-mRNA-1
chr7_4 CDS 18357782 18357968 18357782 ID=Msa1143160-mRNA-1:cds;Parent=Msa1143160-mRNA-1
chr7_4 CDS 18357569 18357766 18357569 ID=Msa1143160-mRNA-1:cds;Parent=Msa1143160-mRNA-1
chr7_4 CDS 18357316 18357417 18357316 ID=Msa1143160-mRNA-1:cds;Parent=Msa1143160-mRNA-1
chr7_4 CDS 18357054 18357285 18357054 ID=Msa1143160-mRNA-1:cds;Parent=Msa1143160-mRNA-1
chr7_4 CDS 18356839 18357017 18356839 ID=Msa1143160-mRNA-1:cds;Parent=Msa1143160-mRNA-1
chr7_4 CDS 18356509 18356709 18356509 ID=Msa1143160-mRNA-1:cds;Parent=Msa1143160-mRNA-1
chr7_4 CDS 18356339 18356502 18356339 ID=Msa1143160-mRNA-1:cds;Parent=Msa1143160-mRNA-1
chr7_4 CDS 18356147 18356302 18356147 ID=Msa1143160-mRNA-1:cds;Parent=Msa1143160-mRNA-1
chr7_4 CDS 18355733 18355744 18355733 ID=Msa1143160-mRNA-1:cds;Parent=Msa1143160-mRNA-1
Gene Sequence

>Msa1143160

ATGGATCCACTGATTTCTGCTGCTTCTGTTATCGCTGCTGGGTTGGCCGTCGGGCTTGCTTCTATTGGACCTGGAGTTGGTCAAGGTACAGCTGCAGGGCAAGCTGTAGAAGGGATTGCGCGACAACCGGAAGCAGAGGACAAAATAAGGGGTACTTTATTACTTAGTCTGGCTTTTATGGAAGCTTTAACTATTTATGGGCTGGTTGTAGCATTAGCACTTTTATTTGCCAATCCTTTTACATTTTTAAATAAATGCAAAGAGAATCTACTTTCATTAAGTGATTTATTAGATAATCGAAAACAGAGAATCTTGAGAACTATTCAAAATTCAGAAGAACTACGGGAAGCAGCCGTTGAACAGCTGGAGAAAGCCCGGGCCCGCTTAAGGAAAGTAGAAACGGAAGCGGATCGGTTTCGAGTGAATGAACGAGAAAAATTGAATTTAATTAATTCAATTTATACAACTTTGGAACAATTCGAAAATTACAAAAATGAAACGATTCATTTTGAACAACAAAGGGCGATTAATCAAGTGCAACAGAGGGTTTTACAACAAGCATTACAAGGAGCTCTGGGAACTCTGAATAGTTGCTTAAACAACGAGTTACATTTACGTACGATCGATGAAATTAGTAAAATTATCCGTGAACGTATTGAGCAATATAATACCGAAGTAAAAATTGTAAATACAGGTACTGTACTTCAAGTAGGCGACGGCATTGCTCGTGAATTAGTCGAATTTGAAGAGGGTACTGTAGGCATTGCTTTGAATTTGGAATCCAAAAATGTTGGTGTTGTATTAATGGGTGATGGTTTGCTGATACAAGAGGGAAGTTCGGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGGTTATTTGGGTCGTGTTGTAAATGCCCTAGCTAAACCTATTGATGGTCGAGGAGAAATTTCAGCTTCGGAATCTCGACGTTCCGTGTATGAGCCTCTTCAAACGGGACTTATTGCTATTGATTCTATGATCCCTATAGGGCGTGGCCAGCGAGAATTAATTATTGGGGACAGACAAACAGGTAAAACAGCAGTAGCAACAGATACAATTCTCAATCAACAGGGACAAAATGTAATATGTGTTTATGTAGCTATTGGTGCAGCTCTGGCTGAATATTTTATGTACCGTGAACGTCACACTTTAATCATTTATGACGATCCCTCCAAACAAGCACAGGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCACCAGGTCGCGAAGCGTATCCCGGAGATGTTTTTTATTTACATTCTCGTCTTTTGGAAAGAGCCGCTAAATTAAGTTCTCAGTTAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCAGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTTTTATCTGCCGATCTATTCAATGCTGGAATCAGACCAGCTATTAATGTGGGTATTTCCGTTTCCAGAGTAGCTGGTAAATTAAAATTGGAATTGGCACAATTCGCAGAATTAGAAGCTTTTGCACAATTCGCTTCTGATCTCGATAAAGCTACGCAAAATCAATTGGCAAGAGGTCAACGATTGCGCGAGTTGCTTAAACAATCCCAATCAGCTCCTCTCACTATACGAATATAA

Protein sequence

>Msa1143160

MDPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEDKIRGTLLLSLAFMEALTIYGLVVALALLFANPFTFLNKCKENLLSLSDLLDNRKQRILRTIQNSEELREAAVEQLEKARARLRKVETEADRFRVNEREKLNLINSIYTTLEQFENYKNETIHFEQQRAINQVQQRVLQQALQGALGTLNSCLNNELHLRTIDEISKIIRERIEQYNTEVKIVNTGTVLQVGDGIARELVEFEEGTVGIALNLESKNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEGYLGRVVNALAKPIDGRGEISASESRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTIRI*