AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0344310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0344310 MtrunA17_CPg0493001 99.147 469 4 0 429 897 7 475 0.0 973
Msa0344310 MtrunA17_CPg0493001 90.357 280 22 1 909 1188 1078 1352 7.86e-151 496
Msa0344310 MtrunA17_Chr4g0016671 99.147 469 4 0 429 897 7 475 0.0 973
Msa0344310 MtrunA17_Chr4g0016671 90.357 280 22 1 909 1188 1078 1352 7.86e-151 496
Msa0344310 MtrunA17_Chr3g0108441 98.837 430 3 1 1 428 1 430 0.0 875
Msa0344310 MtrunA17_Chr3g0108491 98.837 430 3 1 1 428 1 430 0.0 875
Msa0344310 MtrunA17_CPg0493021 98.837 430 3 1 1 428 1 430 0.0 875
Msa0344310 MtrunA17_Chr4g0016661 98.837 430 3 1 1 428 1 430 0.0 875
Msa0344310 MtrunA17_Chr4g0015581 86.835 357 4 1 541 897 1 314 0.0 635
Msa0344310 MtrunA17_Chr4g0015601 97.196 214 6 0 1158 1371 12 225 9.64e-143 437
Msa0344310 MtrunA17_CPg0492991 97.196 214 6 0 1158 1371 12 225 1.24e-142 437
Msa0344310 MtrunA17_Chr4g0015591 99.123 228 2 0 909 1136 470 697 3.68e-142 453
Msa0344310 MtrunA17_Chr8g0342181 60.767 339 58 4 90 428 1 264 2.02e-115 365
Msa0344310 MtrunA17_Chr4g0015551 75.000 212 8 1 116 327 5 171 1.79e-94 302
Msa0344310 MtrunA17_Chr4g0016691 98.361 122 2 0 1250 1371 1 122 2.95e-77 251
Msa0344310 MtrunA17_Chr3g0096371 95.652 115 5 0 168 282 1 115 3.97e-69 227
Msa0344310 MtrunA17_Chr7g0275181 82.456 114 20 0 1061 1174 1 114 2.71e-54 186
Msa0344310 MtrunA17_Chr7g0275161 89.655 87 9 0 1286 1372 1 87 8.72e-47 162
Msa0344310 MtrunA17_Chr4g0016711 100.000 81 0 0 1465 1545 1 81 1.47e-45 158
Msa0344310 MtrunA17_CPg0492971 100.000 81 0 0 1465 1545 1 81 1.47e-45 158
Msa0344310 MtrunA17_Chr4g0015621 100.000 81 0 0 1465 1545 1 81 1.47e-45 158
Msa0344310 MtrunA17_Chr3g0095741 97.531 81 2 0 817 897 8 88 3.70e-44 168
Msa0344310 MtrunA17_Chr7g0243011 92.683 82 6 0 1072 1153 1 82 6.40e-44 155
Msa0344310 MtrunA17_Chr4g0002751 82.796 93 16 0 128 220 1 93 9.99e-44 154
Msa0344310 MtrunA17_Chr7g0275171 80.682 88 7 1 1158 1245 12 89 8.54e-43 151
Msa0344310 MtrunA17_Chr4g0016681 97.059 68 2 0 1158 1225 12 79 4.85e-40 143
Msa0344310 MtrunA17_Chr2g0318321 95.652 69 3 0 429 497 26 94 1.11e-38 139
Msa0344310 MtrunA17_Chr4g0030391 29.126 309 187 6 140 423 247 548 2.97e-29 127
Msa0344310 MtrunA17_Chr4g0030401 28.247 308 191 6 140 423 248 549 3.19e-29 127
Msa0344310 MtrunA17_Chr7g0275151 65.979 97 10 2 1373 1446 33 129 6.53e-29 113
Msa0344310 MtrunA17_Chr4g0016701 53.077 130 5 2 1373 1446 111 240 1.32e-26 110
Msa0344310 MtrunA17_CPg0492981 53.077 130 5 2 1373 1446 111 240 1.32e-26 110
Msa0344310 MtrunA17_Chr4g0015611 53.077 130 5 2 1373 1446 111 240 1.32e-26 110
Msa0344310 MtrunA17_Chr3g0088491 52.308 130 6 2 1373 1446 80 209 3.45e-26 108
Msa0344310 MtrunA17_Chr4g0015571 100.000 44 0 0 429 472 7 50 5.93e-23 93.6
Msa0344310 MtrunA17_Chr5g0406121 28.526 312 190 6 141 423 241 548 8.19e-23 106
Msa0344310 MtrunA17_Chr4g0044991 25.949 316 183 7 151 423 317 624 2.16e-19 95.5
Msa0344310 MtrunA17_Chr1g0178511 97.143 35 1 0 1250 1284 1 35 6.79e-16 77.8
Msa0344310 MtrunA17_Chr4g0002761 65.455 55 19 0 375 429 1 55 3.49e-15 72.0
Msa0344310 MtrunA17_Chr8g0353071 28.053 303 186 10 145 422 211 506 8.04e-12 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0344310 ATCG00170.1 90.234 471 44 1 429 897 3 473 0.0 887
Msa0344310 ATCG00170.1 88.571 245 26 1 912 1156 1076 1318 8.03e-131 441
Msa0344310 ATCG00180.1 92.176 409 30 1 20 428 142 548 0.0 785
Msa0344310 ATCG00160.1 89.720 214 22 0 1158 1371 12 225 1.18e-128 399
Msa0344310 ATCG00140.1 96.296 81 3 0 1465 1545 1 81 2.10e-43 152
Msa0344310 AT5G60040.1 28.710 310 188 5 141 423 250 553 3.49e-28 124
Msa0344310 AT5G60040.2 28.710 310 188 5 141 423 260 563 4.53e-28 124
Msa0344310 ATCG00150.1 51.538 130 7 2 1373 1446 115 244 5.05e-25 106
Msa0344310 AT4G35800.2 28.710 310 192 5 141 423 242 549 9.53e-24 110
Msa0344310 AT4G35800.1 28.710 310 192 5 141 423 242 549 9.53e-24 110
Msa0344310 AT3G57660.2 24.806 387 215 12 151 491 335 691 2.42e-17 89.4
Msa0344310 AT3G57660.2 28.458 253 139 10 552 768 923 1169 2.05e-14 79.7
Msa0344310 AT3G57660.1 25.868 317 183 9 151 423 348 656 2.82e-17 89.0
Msa0344310 AT3G57660.1 28.458 253 139 10 552 768 936 1182 1.94e-14 79.7
Msa0344310 AT1G63020.1 23.514 370 238 11 79 423 152 501 3.99e-14 78.6
Msa0344310 AT1G63020.2 23.514 370 238 11 79 423 152 501 3.99e-14 78.6
Msa0344310 AT1G63020.4 23.514 370 238 11 79 423 152 501 4.01e-14 78.6
Msa0344310 AT1G63020.3 23.514 370 238 11 79 423 152 501 4.55e-14 78.6
Msa0344310 AT1G63020.5 27.461 193 124 3 247 423 1 193 7.72e-13 74.3
Msa0344310 AT2G40030.2 29.016 193 121 3 246 422 310 502 5.09e-11 68.6
Msa0344310 AT2G40030.1 29.016 193 121 3 246 422 310 502 6.29e-11 68.2

Find 326 sgRNAs with CRISPR-Local

Find 670 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGAAGCTTTAACTATTTA+TGG 0.037973 3_1:-2754563 Msa0344310:CDS
TCCTATACCTGTTATGTTTC+TGG 0.052609 3_1:-2755935 Msa0344310:CDS
GTTTGTATCAAAATTCTTTC+TGG 0.155430 3_1:+2761149 None:intergenic
TTCTGGTATCATTCCATTTC+GGG 0.158141 3_1:+2761166 None:intergenic
TGAACAACAAAGTTCTATTT+TGG 0.177929 3_1:-2761630 Msa0344310:CDS
ATCTCATTTGGAAACATATC+TGG 0.181531 3_1:-2757063 Msa0344310:CDS
TCTGGATTTAAGAATTATTA+TGG 0.190370 3_1:-2763480 Msa0344310:CDS
TAATTTCGATATGTCTATTA+TGG 0.208042 3_1:+2758218 None:intergenic
TCTGCTAATAAGTCGTTTAA+TGG 0.223864 3_1:+2761802 None:intergenic
ACCTCTTGTCTCCGGCTATT+GGG 0.225839 3_1:-2762536 Msa0344310:CDS
TCTAATATCTGTTCCACTTT+TGG 0.236437 3_1:+2758427 None:intergenic
ATCCTCTCATTCCGACTAAT+TGG 0.248879 3_1:+2761423 None:intergenic
TTACGCTTTGCCGATATAAA+AGG 0.251568 3_1:+2757401 None:intergenic
TGAAATACCCGCATAGAAAT+AGG 0.255569 3_1:+2756130 None:intergenic
ATGGAAGCTGGAGTTCATTT+TGG 0.255790 3_1:-2757458 Msa0344310:CDS
GCTCCTGGAGTCGCCAAATA+TGG 0.258399 3_1:+2758550 None:intergenic
TGTTCATGTGCCTTTATCTT+TGG 0.264426 3_1:-2762601 Msa0344310:CDS
CGGAAGCAGAGGACAAAATA+AGG 0.270738 3_1:-2754613 Msa0344310:CDS
CCAACTCAAGATATGCTTAT+AGG 0.271742 3_1:-2762498 Msa0344310:CDS
CCTGGGATCGATAAACCTTT+TGG 0.276582 3_1:+2758251 None:intergenic
CATTATATGGACTGGATTAA+AGG 0.289410 3_1:+2761484 None:intergenic
AACCTCTTGTCTCCGGCTAT+TGG 0.290298 3_1:-2762537 Msa0344310:CDS
GCACGTCCTTCTACTAAAAT+AGG 0.292699 3_1:+2762687 None:intergenic
CCTATACCTGTTATGTTTCT+GGG 0.293135 3_1:-2755934 Msa0344310:CDS
CAAGAGACAATTATCTCATT+TGG 0.294663 3_1:-2757075 Msa0344310:CDS
GGATCTGCCGATTGTGTTAT+GGG 0.297223 3_1:-2760968 Msa0344310:CDS
TTTCTGGTATCATTCCATTT+CGG 0.299397 3_1:+2761165 None:intergenic
TGTTACCGAGCTTTATTATT+GGG 0.299555 3_1:-2758070 Msa0344310:CDS
TAGATCTACTTGTTGTTAAT+AGG 0.299908 3_1:+2763165 None:intergenic
AGTCATTTATGGATCTTATC+AGG 0.301174 3_1:-2760442 Msa0344310:CDS
TTGTTACCGAGCTTTATTAT+TGG 0.301429 3_1:-2758071 Msa0344310:CDS
TGGATCTGCCGATTGTGTTA+TGG 0.301508 3_1:-2760969 Msa0344310:CDS
GGGTCAGTCATCCTAAAATT+AGG 0.301712 3_1:+2761506 None:intergenic
AGCGCAAAGTCGTATTTCTT+TGG 0.301847 3_1:-2758284 Msa0344310:CDS
ATTGAATCCTATTGAATCTA+AGG 0.304062 3_1:-2755167 Msa0344310:intron
AGCGCCTACTTTGCATAGAT+TGG 0.308716 3_1:-2762727 Msa0344310:CDS
CCTCCATCTATTTGAATAAT+CGG 0.310599 3_1:+2763257 None:intergenic
ACCACATCTAAAACTAAAAT+CGG 0.311242 3_1:-2758623 Msa0344310:CDS
GCCGTCGGGCTTGCTTCTAT+TGG 0.311843 3_1:-2754695 Msa0344310:CDS
TTGGTAGAATGGAAAGAATT+AGG 0.313946 3_1:-2763449 Msa0344310:CDS
GCTGCTTCTGTTATCGCTGC+TGG 0.315135 3_1:-2754722 Msa0344310:CDS
TGGAAGCTTTAACTATTTAT+GGG 0.316470 3_1:-2754562 Msa0344310:CDS
AAGATCGGCTAACCCATATT+TGG 0.317195 3_1:-2758563 Msa0344310:CDS
TCATGGGGACCTGGTAGAAT+TGG 0.318933 3_1:-2760934 Msa0344310:CDS
TTCTCGTAAATTGCTTTGAA+TGG 0.322270 3_1:+2761364 None:intergenic
TTTACATCCATTAGTGTGTA+AGG 0.327520 3_1:-2762658 Msa0344310:CDS
CAGTATCCACAACCCCTTTA+CGG 0.329838 3_1:+2761300 None:intergenic
AACTTTGTTGTTCAGCATCT+TGG 0.334259 3_1:+2761639 None:intergenic
AGAAATCAAGATATTGGAAT+TGG 0.334567 3_1:-2761068 Msa0344310:CDS
TTTAGCAAAAGCCGCTCTTC+GGG 0.336042 3_1:-2757978 Msa0344310:CDS
TACGCCAATCCATTGAAATA+TGG 0.339395 3_1:-2761565 Msa0344310:CDS
ATTATTGCTGGTCAATCTAT+TGG 0.340445 3_1:-2760897 Msa0344310:CDS
TTGAATAATCGGTCTCAATT+CGG 0.341142 3_1:+2763268 None:intergenic
ATTCCTTGGGGATTCTTGAT+TGG 0.341306 3_1:-2758322 Msa0344310:CDS
ATCAACGATTATTACAATAT+CGG 0.341941 3_1:+2757013 None:intergenic
GTCGTTAGAAATCAAGATAT+TGG 0.341954 3_1:-2761074 Msa0344310:CDS
CTCTTCGGGGTCGTATTGAT+TGG 0.345022 3_1:-2757964 Msa0344310:CDS
GGAAAACGAGTTGATTATTC+GGG 0.350240 3_1:-2762972 Msa0344310:CDS
AGACCGATTATTCAAATAGA+TGG 0.352617 3_1:-2763260 Msa0344310:CDS
ACTGCTACATCTATTTCATT+AGG 0.354727 3_1:-2761704 Msa0344310:CDS
GATAAAGGATTTCTCCATAA+TGG 0.357948 3_1:+2758515 None:intergenic
CTAAAATATCTCCTTGATAA+AGG 0.358065 3_1:+2758500 None:intergenic
TGGAAAACGAGTTGATTATT+CGG 0.358566 3_1:-2762973 Msa0344310:CDS
TTTATCAGAAGCTTGTGATT+TGG 0.358806 3_1:-2757339 Msa0344310:CDS
CTAATTTGTTAAGAATTAAT+CGG 0.359442 3_1:+2756856 None:intergenic
ATCTTGAGTTGGTACGGAAA+TGG 0.362284 3_1:+2762509 None:intergenic
GCTGCAGGGCAAGCTGTAGA+AGG 0.363265 3_1:-2754650 Msa0344310:CDS
ATCGAAATATCTGCTAGATC+TGG 0.363586 3_1:+2756909 None:intergenic
GGATACTGTATTTCCAAGAT+TGG 0.364284 3_1:+2763591 None:intergenic
TAGATTCAATAGGATTCAAT+AGG 0.364608 3_1:+2755170 None:intergenic
TGAATAATCGGTCTCAATTC+GGG 0.364643 3_1:+2763269 None:intergenic
GGGTACTTTATTACTTAGTC+TGG 0.366228 3_1:-2754591 Msa0344310:CDS
TAGGATTCGAGAATCATTCT+TGG 0.369091 3_1:+2755189 None:intergenic
CTTAATGTTAGTTGAGTTCC+CGG 0.369671 3_1:+2760870 None:intergenic
ATTATATGGACTGGATTAAA+GGG 0.370361 3_1:+2761485 None:intergenic
GCAACCATTCATGGCCATTA+TGG 0.371253 3_1:-2758529 Msa0344310:CDS
ATCTTCTGAAACCAAGACTT+TGG 0.372706 3_1:+2758177 None:intergenic
AAAGTCTTGGTTTCAGAAGA+TGG 0.375293 3_1:-2758175 Msa0344310:CDS
TGGACTAGCCATCCTTTAGA+AGG 0.382153 3_1:+2761659 None:intergenic
TTCCGCTAGTTAATACATAA+AGG 0.382446 3_1:+2762475 None:intergenic
TTGAATCCCTTACACACTAA+TGG 0.385461 3_1:+2762651 None:intergenic
CAAGAATTCTCGGCATTCCT+TGG 0.385715 3_1:-2758336 Msa0344310:CDS
GTGGATACACTCCTTGATAA+TGG 0.387696 3_1:-2763095 Msa0344310:CDS
CTTCGAGAATGTATCACTTT+GGG 0.388824 3_1:-2756969 Msa0344310:CDS
ATTTCTGTAAATACCCGAAA+TGG 0.389944 3_1:-2761179 Msa0344310:CDS
GGAAAACAATTCTTAATTGT+TGG 0.390734 3_1:-2757296 Msa0344310:CDS
TTTCAGACATTTCTAATTCG+TGG 0.395006 3_1:-2762873 Msa0344310:CDS
ACGAGAACAATTAGTTGATC+TGG 0.400881 3_1:-2763498 Msa0344310:CDS
GGCGCTCTATTCAGCAATAC+TGG 0.401200 3_1:+2762744 None:intergenic
AGTATCCACAACCCCTTTAC+GGG 0.401249 3_1:+2761301 None:intergenic
AAGAATTCTCGGCATTCCTT+GGG 0.401980 3_1:-2758335 Msa0344310:CDS
AGACATAAAACCATCCATTC+TGG 0.402557 3_1:+2763308 None:intergenic
TGGTCAATCTATTGGCGAAC+CGG 0.405693 3_1:-2760889 Msa0344310:CDS
TGGATTCTTCGTTGGTAGAA+TGG 0.407733 3_1:-2763460 Msa0344310:CDS
GGATTCAATGCAGACTTTGA+TGG 0.407959 3_1:-2762636 Msa0344310:CDS
TCATGTGCCTTTATCTTTGG+AGG 0.409231 3_1:-2762598 Msa0344310:CDS
CTTGCTACGGAGCCCGTAAA+GGG 0.410011 3_1:-2761313 Msa0344310:CDS
AGCAGATTAATAGACCATTT+CGG 0.411046 3_1:-2761785 Msa0344310:CDS
TCAAGTTATAACTGTTCAAA+TGG 0.411576 3_1:-2758599 Msa0344310:CDS
AAACGAGACTTCGTAAGTTC+AGG 0.412190 3_1:-2757163 Msa0344310:CDS
GCTTGAGCCTCCAAAGATAA+AGG 0.413525 3_1:+2762591 None:intergenic
GCTTCTATTGGACCTGGAGT+TGG 0.416315 3_1:-2754683 Msa0344310:CDS
ACCTTAGCTGCGGCTTATAT+AGG 0.418344 3_1:-2755874 Msa0344310:intron
TCGAATATGAAATCCAATCT+TGG 0.418713 3_1:-2763604 Msa0344310:CDS
AGTTATACCTTAGATTCAAT+AGG 0.420668 3_1:+2755160 None:intergenic
GACGTATTCCTACAGGTAAA+GGG 0.421613 3_1:+2760993 None:intergenic
AGTAGTATTTATATCATTTG+TGG 0.424401 3_1:+2756181 None:intergenic
GATTCAATGCAGACTTTGAT+GGG 0.425961 3_1:-2762635 Msa0344310:CDS
TCTTGAGTTGGTACGGAAAT+GGG 0.426083 3_1:+2762510 None:intergenic
TCGCTGCTGGGTTGGCCGTC+GGG 0.427770 3_1:-2754709 Msa0344310:CDS
ATCGCTGCTGGGTTGGCCGT+CGG 0.428270 3_1:-2754710 Msa0344310:CDS
CTCAATTCGGGAGGAAGAAC+TGG 0.430438 3_1:+2763281 None:intergenic
TGCAGCCCGTGTTACTGAAT+CGG 0.431042 3_1:+2757256 None:intergenic
TCTCGTAAATTGCTTTGAAT+GGG 0.433790 3_1:+2761365 None:intergenic
GTAGTATTTATATCATTTGT+GGG 0.434707 3_1:+2756182 None:intergenic
ATTCTGGTTCTATATTTGTT+CGG 0.435196 3_1:+2763324 None:intergenic
TGATCAGCAAGAAGAATATA+CGG 0.437056 3_1:-2756994 Msa0344310:CDS
TTATTATGACCGTCCCTCAT+TGG 0.440271 3_1:+2763059 None:intergenic
ACTCCAGGAGCAACCATTCA+TGG 0.440561 3_1:-2758538 Msa0344310:CDS
TCTACCAGGTCCCCATGAAT+AGG 0.440638 3_1:+2760939 None:intergenic
CATGGGGACCTGGTAGAATT+GGG 0.442448 3_1:-2760933 Msa0344310:CDS
CATACCATATTTCAATGGAT+TGG 0.443039 3_1:+2761561 None:intergenic
AATAATCCCAGAAACATAAC+AGG 0.443207 3_1:+2755928 None:intergenic
CAGATTGCGGTACGATTCGC+GGG 0.446348 3_1:-2761202 Msa0344310:CDS
TTTGCATAGATTGGGCATAC+AGG 0.446557 3_1:-2762718 Msa0344310:CDS
TCGGAGGTATGTTAACGAAT+TGG 0.448395 3_1:-2757196 Msa0344310:CDS
CCCAGAAACATAACAGGTAT+AGG 0.450475 3_1:+2755934 None:intergenic
TGTAGCATACCATATTTCAA+TGG 0.450731 3_1:+2761556 None:intergenic
CATACTGGTGGAGTATTCAC+AGG 0.451249 3_1:-2760840 Msa0344310:CDS
TCAAATAACATCCAAAGTCT+TGG 0.456056 3_1:-2758188 Msa0344310:CDS
AAAAGATTAAACAAAAGGAT+TGG 0.459809 3_1:+2754511 None:intergenic
TTGGCCATGATACTCGGAAA+TGG 0.459897 3_1:-2757439 Msa0344310:CDS
AGCTTTAACTATTTATGGGC+TGG 0.460263 3_1:-2754558 Msa0344310:CDS
CTGCTTCTGTTATCGCTGCT+GGG 0.461552 3_1:-2754721 Msa0344310:CDS
CTGGATCAAGTAAAGACTCT+AGG 0.462436 3_1:-2761740 Msa0344310:CDS
CACTGACAATGAAAATGAAT+GGG 0.463118 3_1:-2763414 Msa0344310:CDS
CTAGAGTCTTTACTTGATCC+AGG 0.463607 3_1:+2761741 None:intergenic
CCACTGACAATGAAAATGAA+TGG 0.464389 3_1:-2763415 Msa0344310:CDS
AGACGTATTCCTACAGGTAA+AGG 0.465006 3_1:+2760992 None:intergenic
GAGTGTATAACAAGAATTCT+CGG 0.465449 3_1:-2758346 Msa0344310:CDS
CAATAATCCAATTAATTCAC+CGG 0.465805 3_1:+2758132 None:intergenic
TGGAAAGAATTAGGAGAAGA+GGG 0.467304 3_1:-2763440 Msa0344310:CDS
TATGGAGAAATCCTTTATCA+AGG 0.470177 3_1:-2758511 Msa0344310:CDS
GGAATAGGAGAAACTTATCA+TGG 0.471874 3_1:-2754759 Msa0344310:intron
GTAGCAGACGATATATATAT+CGG 0.471989 3_1:-2761110 Msa0344310:CDS
GGAAGCAGAGGACAAAATAA+GGG 0.473459 3_1:-2754612 Msa0344310:CDS
AGAAGGGATTGCGCGACAAC+CGG 0.475077 3_1:-2754633 Msa0344310:CDS
CTCCTGGAGTCGCCAAATAT+GGG 0.476067 3_1:+2758551 None:intergenic
GCGCCTACTTTGCATAGATT+GGG 0.476543 3_1:-2762726 Msa0344310:CDS
TGAAGTATTTCCCATACAAT+CGG 0.477354 3_1:+2762786 None:intergenic
TCTTCGAGAATGTATCACTT+TGG 0.477646 3_1:-2756970 Msa0344310:CDS
AACGAGACTTCGTAAGTTCA+GGG 0.478021 3_1:-2757162 Msa0344310:CDS
CCTCTTGTCTCCGGCTATTG+GGG 0.480180 3_1:-2762535 Msa0344310:CDS
TCAACGATTATTACAATATC+GGG 0.480431 3_1:+2757014 None:intergenic
GGGCTTGCTTCTATTGGACC+TGG 0.481695 3_1:-2754689 Msa0344310:CDS
TTGAGAACGGAGCAAAAGAC+AGG 0.482432 3_1:-2757137 Msa0344310:CDS
GGGCGTTCTGTTATTGTCGT+AGG 0.483193 3_1:-2762951 Msa0344310:CDS
TTCTCCATAATGGCCATGAA+TGG 0.483718 3_1:+2758525 None:intergenic
AACCCATATTTGGCGACTCC+AGG 0.484987 3_1:-2758553 Msa0344310:CDS
AGTTTCTTGAAAACTCGCTT+CGG 0.487107 3_1:+2758009 None:intergenic
TTTGGTTAATAAAATCCAAA+AGG 0.488399 3_1:-2758266 Msa0344310:CDS
AGAGAAATTTCTAGTGGAGC+AGG 0.488408 3_1:-2763527 Msa0344310:CDS
GATTCCATTTCCGAGTATCA+TGG 0.488914 3_1:+2757435 None:intergenic
TTTGAAGAGATGATGGAAGC+TGG 0.489132 3_1:-2757470 Msa0344310:intron
GTCTTTCACAATAACGTGAT+AGG 0.489141 3_1:-2761833 Msa0344310:CDS
GTTATTGTGAAAGACTAGAT+TGG 0.489846 3_1:+2761841 None:intergenic
TCTTGCTACGGAGCCCGTAA+AGG 0.490200 3_1:-2761314 Msa0344310:CDS
AACACAAGGTCTTCCAAAAG+TGG 0.491269 3_1:-2758440 Msa0344310:CDS
GTATCGATTAAACAAATCGT+TGG 0.491426 3_1:+2756942 None:intergenic
TGGAGGGAAACTAATGAGTT+CGG 0.494350 3_1:-2763240 Msa0344310:CDS
GGCATATACATCACACATCC+TGG 0.495134 3_1:-2761759 Msa0344310:CDS
TATTATGGATGTGTACTCCC+TGG 0.495688 3_1:+2758233 None:intergenic
TAACAATACCTTCTAAAGGA+TGG 0.495965 3_1:-2761667 Msa0344310:CDS
ACTCAGAAGGCGAAATGCAT+TGG 0.496258 3_1:-2760527 Msa0344310:CDS
CGAAATAGAGAAATTTCTAG+TGG 0.496839 3_1:-2763533 Msa0344310:CDS
TAGCTCTATTGCTATTTCGC+GGG 0.496998 3_1:+2762896 None:intergenic
GTTGGTCAAGGTACAGCTGC+AGG 0.497139 3_1:-2754665 Msa0344310:CDS
AATTATTATGGATTCTTCGT+TGG 0.499116 3_1:-2763468 Msa0344310:CDS
GAAGCTGTAGGTATTATTGC+TGG 0.500714 3_1:-2760909 Msa0344310:CDS
TCATACAAACCTCTTGTCTC+CGG 0.506883 3_1:-2762544 Msa0344310:CDS
ATGGGCGGAGTCCTATTCAT+GGG 0.508984 3_1:-2760950 Msa0344310:CDS
AGAACGAACTGGGCGTGCCT+TGG 0.511332 3_1:-2758104 Msa0344310:CDS
GAATGGGAAGATCGAAAAGT+AGG 0.511851 3_1:-2763398 Msa0344310:CDS
GACTCCGCCCATAACACAAT+CGG 0.512450 3_1:+2760961 None:intergenic
CCTCGTAATCGTAAGAAAGT+AGG 0.512515 3_1:+2763632 None:intergenic
CGGAGCCCGTAAAGGGGTTG+TGG 0.513039 3_1:-2761306 Msa0344310:CDS
AAATCAATCATTTGTCCTTG+TGG 0.513235 3_1:+2761389 None:intergenic
ATGGAAAGAATTAGGAGAAG+AGG 0.513927 3_1:-2763441 Msa0344310:CDS
TTCTGTTATCGCTGCTGGGT+TGG 0.514112 3_1:-2754717 Msa0344310:CDS
ATAGCTCTATTGCTATTTCG+CGG 0.516257 3_1:+2762895 None:intergenic
TAGATGTAGCAGTAGCTTGA+CGG 0.516966 3_1:+2761714 None:intergenic
TATGGGCGGAGTCCTATTCA+TGG 0.517790 3_1:-2760951 Msa0344310:CDS
GCTATAGCATCATCATTAGC+TGG 0.518853 3_1:+2756885 None:intergenic
GAGTTGCTAAGAGTAAAATA+CGG 0.520079 3_1:-2762818 Msa0344310:CDS
ATTATGGATGTGTACTCCCT+GGG 0.522327 3_1:+2758234 None:intergenic
AGATTTCGAGAGACTCTGCT+TGG 0.523467 3_1:-2762993 Msa0344310:CDS
GGTCGTATTGATTGGTTGAA+AGG 0.523725 3_1:-2757956 Msa0344310:CDS
TTATTGCGAGCAGAACGAAC+TGG 0.524459 3_1:-2758115 Msa0344310:CDS
TCGAAATATCTGCTAGATCT+GGG 0.525094 3_1:+2756910 None:intergenic
ATGTATATGCCATTCCGAAA+TGG 0.525535 3_1:+2761771 None:intergenic
AAAATTATAAAGTTACCTCA+TGG 0.526541 3_1:-2756218 Msa0344310:CDS
GGTCAATCTATTGGCGAACC+GGG 0.527123 3_1:-2760888 Msa0344310:CDS
CCAAAAGGTTTATCGATCCC+AGG 0.528931 3_1:-2758251 Msa0344310:CDS
TGGCCATGAATGGTTGCTCC+TGG 0.529145 3_1:+2758535 None:intergenic
ACCTATATAAGCCGCAGCTA+AGG 0.529655 3_1:+2755873 None:intergenic
TTTATATCGGCAAAGCGTAA+AGG 0.529937 3_1:-2757398 Msa0344310:CDS
AGACTTTGATGGGGATCAAA+TGG 0.531054 3_1:-2762625 Msa0344310:CDS
ACAGATTGCGGTACGATTCG+CGG 0.531220 3_1:-2761203 Msa0344310:CDS
GTCCGCGGATTCCATTATCA+AGG 0.532137 3_1:+2763084 None:intergenic
CCTATAAGCATATCTTGAGT+TGG 0.532621 3_1:+2762498 None:intergenic
TTGGATAGGATCCAATAAGA+TGG 0.534215 3_1:+2763687 None:intergenic
GAATATATAATTTCTTGCTA+CGG 0.534554 3_1:-2761326 Msa0344310:CDS
ATCCATGACGTGTACGTGTA+GGG 0.535056 3_1:+2760751 None:intergenic
CAGCTTCTCCCAATTCTACC+AGG 0.535523 3_1:+2760925 None:intergenic
GATATAATTGAGGGCAAAGA+GGG 0.535939 3_1:-2763017 Msa0344310:CDS
TCTATATTACATATAAAAGC+AGG 0.536951 3_1:+2760726 None:intergenic
TGGATCAAGTAAAGACTCTA+GGG 0.538268 3_1:-2761739 Msa0344310:CDS
AATACTTCAAGAAGTTATGC+GGG 0.538847 3_1:-2762772 Msa0344310:CDS
GATATAAAAGGTGCCATTCG+AGG 0.542260 3_1:+2757413 None:intergenic
GTAACAAATTGCTTCTTCCA+AGG 0.542955 3_1:+2758087 None:intergenic
AAGCATATCTTGAGTTGGTA+CGG 0.543078 3_1:+2762503 None:intergenic
ATTGGACCTGGAGTTGGTCA+AGG 0.543278 3_1:-2754677 Msa0344310:CDS
GATCCAAGACGTATTCCTAC+AGG 0.544747 3_1:+2760986 None:intergenic
TTACCTGTAGGAATACGTCT+TGG 0.547868 3_1:-2760989 Msa0344310:CDS
CCTTTGAAAATCGGACGTGA+GGG 0.548394 3_1:+2763717 None:intergenic
CATATTTATTCTGACTCAGA+AGG 0.548655 3_1:-2760540 Msa0344310:CDS
TGACACATTACTAATTCCCC+TGG 0.549045 3_1:+2763140 None:intergenic
TCTCATTTGGAAACATATCT+GGG 0.550552 3_1:-2757062 Msa0344310:CDS
GAACAAATATAGAACCAGAA+TGG 0.550621 3_1:-2763322 Msa0344310:CDS
CCCTTTGAAAATCGGACGTG+AGG 0.550708 3_1:+2763716 None:intergenic
AAGACCTTGTGTTATATCAC+CGG 0.552596 3_1:+2758450 None:intergenic
TCAGTAGCCTATTTCTATGC+GGG 0.553188 3_1:-2756137 Msa0344310:intron
TTATTCCCAATAATAAAGCT+CGG 0.553354 3_1:+2758065 None:intergenic
GGATTCTGTAATAATAAGAT+CGG 0.553640 3_1:-2758578 Msa0344310:CDS
TGCGCGACAACCGGAAGCAG+AGG 0.554171 3_1:-2754624 Msa0344310:CDS
AGTTGCTAAGAGTAAAATAC+GGG 0.563519 3_1:-2762817 Msa0344310:CDS
CCACATCTAAAACTAAAATC+GGG 0.564041 3_1:-2758622 Msa0344310:CDS
TTACATCCATTAGTGTGTAA+GGG 0.565613 3_1:-2762657 Msa0344310:CDS
CACCCTACACGTACACGTCA+TGG 0.566616 3_1:-2760753 Msa0344310:CDS
AAATATAGAACCAGAATGGA+TGG 0.566690 3_1:-2763318 Msa0344310:CDS
TCTATAGAAGAGTTATCTAT+CGG 0.571448 3_1:-2763205 Msa0344310:CDS
TATTGCGAGCAGAACGAACT+GGG 0.572451 3_1:-2758114 Msa0344310:CDS
GCTGTACGAACATCAGATGC+TGG 0.573261 3_1:-2761278 Msa0344310:CDS
TACACGTCGACTTGTTGAAG+TGG 0.573503 3_1:-2761249 Msa0344310:CDS
CCGATTATTCAAATAGATGG+AGG 0.576436 3_1:-2763257 Msa0344310:CDS
ATGCCCAATCTATGCAAAGT+AGG 0.578492 3_1:+2762723 None:intergenic
CACCAATTAGTCGGAATGAG+AGG 0.580106 3_1:-2761425 Msa0344310:CDS
CTGCAGGGCAAGCTGTAGAA+GGG 0.582070 3_1:-2754649 Msa0344310:CDS
GAGTCCTATTCATGGGGACC+TGG 0.582108 3_1:-2760943 Msa0344310:CDS
TCACTTTCATTACATCGATG+TGG 0.585158 3_1:-2762924 Msa0344310:CDS
GGGTGGCATAAAATATATGA+CGG 0.585418 3_1:-2757042 Msa0344310:CDS
ACAGGTATAGGAACTACTAA+AGG 0.585481 3_1:+2755946 None:intergenic
TCTTATCAGGAAAGTCGTGC+AGG 0.586356 3_1:-2760429 Msa0344310:intron
ATTAATAGACCATTTCGGAA+TGG 0.587547 3_1:-2761780 Msa0344310:CDS
CCTACTTTCTTACGATTACG+AGG 0.587628 3_1:-2763632 Msa0344310:CDS
GAAATGGGATCCCCAATAGC+CGG 0.587924 3_1:+2762525 None:intergenic
TAAGTTCAGGGACTTGAGAA+CGG 0.589134 3_1:-2757150 Msa0344310:CDS
ACGATATATATATCGGTTCA+CGG 0.590851 3_1:-2761103 Msa0344310:CDS
GCTGTACCTTGACCAACTCC+AGG 0.593501 3_1:+2754671 None:intergenic
GGCCTTTATGTATTAACTAG+CGG 0.596927 3_1:-2762477 Msa0344310:CDS
AAAATTGGTACAAGAAGCCG+TGG 0.599616 3_1:-2763114 Msa0344310:CDS
TATCCATGACGTGTACGTGT+AGG 0.600683 3_1:+2760750 None:intergenic
AGCTCTATTGCTATTTCGCG+GGG 0.600779 3_1:+2762897 None:intergenic
ATTCAAAGCAATTTACGAGA+AGG 0.601229 3_1:-2761362 Msa0344310:CDS
CTCCTTGATAATGGAATCCG+CGG 0.604913 3_1:-2763086 Msa0344310:CDS
AGATATAATTGAGGGCAAAG+AGG 0.606620 3_1:-2763018 Msa0344310:CDS
CATCGATGTAATGAAAGTGA+TGG 0.607503 3_1:+2762927 None:intergenic
CAAAAGGTTTATCGATCCCA+GGG 0.609012 3_1:-2758250 Msa0344310:CDS
GGTGGCATAAAATATATGAC+GGG 0.610359 3_1:-2757041 Msa0344310:CDS
AGCAGCCGATTCAGTAACAC+GGG 0.610911 3_1:-2757261 Msa0344310:CDS
TCTCAAGTGCACCAATTAGT+CGG 0.615181 3_1:-2761434 Msa0344310:CDS
CCCCAATAGCCGGAGACAAG+AGG 0.615798 3_1:+2762535 None:intergenic
ATTATCAAGGAGTGTATCCA+CGG 0.619206 3_1:+2763097 None:intergenic
AATCCGCGGACAACCAATGA+GGG 0.620928 3_1:-2763072 Msa0344310:CDS
AAATACTTTAGCCGGATGAG+AGG 0.622971 3_1:-2763743 None:intergenic
ATCAATACGACCCCGAAGAG+CGG 0.623604 3_1:+2757967 None:intergenic
CGTCCCTCATTGGTTGTCCG+CGG 0.625858 3_1:+2763069 None:intergenic
GTGATTGCTGAGATCCGCGC+GGG 0.626051 3_1:-2760600 Msa0344310:CDS
AGAATTCTCGGCATTCCTTG+GGG 0.628635 3_1:-2758334 Msa0344310:CDS
ACGTATTCCTACAGGTAAAG+GGG 0.629974 3_1:+2760994 None:intergenic
TTTCTGGGATTATTTACAAG+CGG 0.630473 3_1:-2755919 Msa0344310:CDS
AATAATCCAATTAATTCACC+GGG 0.632479 3_1:+2758133 None:intergenic
TCGGAAATGGAATCCTCGAA+TGG 0.635386 3_1:-2757426 Msa0344310:CDS
TCCAATAGAAGCAAGCCCGA+CGG 0.638086 3_1:+2754694 None:intergenic
TTGCTACGGAGCCCGTAAAG+GGG 0.638134 3_1:-2761312 Msa0344310:CDS
AAATACTTCAAGAAGTTATG+CGG 0.639489 3_1:-2762773 Msa0344310:CDS
CGATTATTCAAATAGATGGA+GGG 0.639639 3_1:-2763256 Msa0344310:CDS
ACAGAAGCAGCAGAAATCAG+TGG 0.640161 3_1:+2754734 None:intergenic
GTAGAATTGGGAGAAGCTGT+AGG 0.641313 3_1:-2760921 Msa0344310:CDS
TTGGTCAAGGTACAGCTGCA+GGG 0.643472 3_1:-2754664 Msa0344310:CDS
TTTCACAATAACGTGATAGG+TGG 0.645396 3_1:-2761830 Msa0344310:CDS
ATACTGGTGGAGTATTCACA+GGG 0.646983 3_1:-2760839 Msa0344310:CDS
CGCGGACAACCAATGAGGGA+CGG 0.650205 3_1:-2763068 Msa0344310:CDS
AAGCAGCCGATTCAGTAACA+CGG 0.653513 3_1:-2757262 Msa0344310:CDS
GTCAGTAGCCTATTTCTATG+CGG 0.655321 3_1:-2756138 Msa0344310:CDS
GAAGCAGAGGACAAAATAAG+GGG 0.658398 3_1:-2754611 Msa0344310:CDS
GTTGTACGTCGAACAGATTG+CGG 0.659130 3_1:-2761215 Msa0344310:CDS
ACAACAAGTAGATCTACACC+AGG 0.661649 3_1:-2763158 Msa0344310:CDS
ATTCAATGCAGACTTTGATG+GGG 0.662689 3_1:-2762634 Msa0344310:CDS
GAAAACGAGTTGATTATTCG+GGG 0.664266 3_1:-2762971 Msa0344310:CDS
TGGGCGGAGTCCTATTCATG+GGG 0.665077 3_1:-2760949 Msa0344310:CDS
TTAGCAAAAGCCGCTCTTCG+GGG 0.665173 3_1:-2757977 Msa0344310:CDS
GCACCAATCAAGAATCCCCA+AGG 0.666821 3_1:+2758319 None:intergenic
GAATCCGCGGACAACCAATG+AGG 0.667535 3_1:-2763073 Msa0344310:CDS
TACTTCAAGAAGTTATGCGG+GGG 0.669171 3_1:-2762770 Msa0344310:CDS
TGAGAACGGAGCAAAAGACA+GGG 0.670658 3_1:-2757136 Msa0344310:CDS
CGTATTCCTACAGGTAAAGG+GGG 0.679391 3_1:+2760995 None:intergenic
TTATATGGACTGGATTAAAG+GGG 0.684921 3_1:+2761486 None:intergenic
ATACTTCAAGAAGTTATGCG+GGG 0.687954 3_1:-2762771 Msa0344310:CDS
TCAGTATGGGAATGTACATG+CGG 0.691247 3_1:-2761597 Msa0344310:CDS
TTCGGATGCATGGTACACAT+CGG 0.696241 3_1:+2760500 None:intergenic
CAACAAGTAGATCTACACCA+GGG 0.701288 3_1:-2763157 Msa0344310:CDS
AACAAGTAGATCTACACCAG+GGG 0.706918 3_1:-2763156 Msa0344310:CDS
GGATTAATGTCAGATCCACA+AGG 0.711466 3_1:-2761404 Msa0344310:CDS
ATAATCGGTCTCAATTCGGG+AGG 0.712530 3_1:+2763272 None:intergenic
GGTGCAGCTAATTCTCCATG+AGG 0.714976 3_1:+2756203 None:intergenic
CATTTGGAAACATATCTGGG+TGG 0.732935 3_1:-2757059 Msa0344310:CDS
TTAACTAGCGGAAATCGTCG+AGG 0.734048 3_1:-2762465 Msa0344310:intron
AGATCCGGTGATATAACACA+AGG 0.736976 3_1:-2758454 Msa0344310:CDS
GTGGCATAAAATATATGACG+GGG 0.737363 3_1:-2757040 Msa0344310:CDS
TCTGCCGATTGTGTTATGGG+CGG 0.746299 3_1:-2760965 Msa0344310:CDS
TAAAAGTATATGTTCCCGCG+CGG 0.748407 3_1:+2760586 None:intergenic
ACTGGTGGAGTATTCACAGG+GGG 0.750203 3_1:-2760837 Msa0344310:CDS
AGTGATTGCTGAGATCCGCG+CGG 0.769084 3_1:-2760601 Msa0344310:CDS
TAATTGTCTCTTGAACATAG+CGG 0.783646 3_1:+2757085 None:intergenic
TACTGGTGGAGTATTCACAG+GGG 0.793942 3_1:-2760838 Msa0344310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAATCAAATAATATGTA+CGG - chr3_1:2758014-2758033 Msa0344310:CDS 10.0%
!!! TTTTTTTTTTCTTTTCTAAT+CGG + chr3_1:2758506-2758525 None:intergenic 10.0%
!!! TTATTATTAATTGGAATTTT+AGG + chr3_1:2759281-2759300 None:intergenic 10.0%
!!! GATAAATAAATTTTTAGATT+TGG - chr3_1:2761469-2761488 Msa0344310:CDS 10.0%
!! AATATATATATAACTTGAAA+GGG + chr3_1:2761634-2761653 None:intergenic 10.0%
!! AAATATATATATAACTTGAA+AGG + chr3_1:2761635-2761654 None:intergenic 10.0%
!! TATTAGAAATAATATTAGAT+TGG - chr3_1:2762710-2762729 Msa0344310:CDS 10.0%
!! ATTAGAAATAATATTAGATT+GGG - chr3_1:2762711-2762730 Msa0344310:CDS 10.0%
!!! TTTCTTTTCTTTATTTTATT+TGG - chr3_1:2763465-2763484 Msa0344310:CDS 10.0%
!!! ATTTTGATACAAACATTAAT+TGG - chr3_1:2757105-2757124 Msa0344310:CDS 15.0%
!!! ATACTTTTAATTTGAAAGAA+AGG - chr3_1:2757673-2757692 Msa0344310:intron 15.0%
!!! TACTTTTAATTTGAAAGAAA+GGG - chr3_1:2757674-2757693 Msa0344310:intron 15.0%
!! TACATTACTATACAAAAATT+CGG + chr3_1:2757766-2757785 None:intergenic 15.0%
!! ATTACTAAATATAGAACTAT+AGG - chr3_1:2758264-2758283 Msa0344310:CDS 15.0%
!!! ATCGAATTAAAAATATTTTC+TGG - chr3_1:2758527-2758546 Msa0344310:CDS 15.0%
!!! TGTAATTTTATATGAAATAC+CGG - chr3_1:2758717-2758736 Msa0344310:intron 15.0%
!! AATTATATTCTTTATGGAAA+TGG - chr3_1:2758814-2758833 Msa0344310:intron 15.0%
!! TTTGATTATGAGTTATTAAA+CGG + chr3_1:2759361-2759380 None:intergenic 15.0%
!! GTCATTATGTTAATAAAAAA+TGG - chr3_1:2761025-2761044 Msa0344310:CDS 15.0%
!!! CTAATTTGTTAAGAATTAAT+CGG + chr3_1:2761392-2761411 None:intergenic 15.0%
!!! AATAAATTTTTAGATTTGGT+TGG - chr3_1:2761473-2761492 Msa0344310:CDS 15.0%
!!! ATAAATTTTTAGATTTGGTT+GGG - chr3_1:2761474-2761493 Msa0344310:CDS 15.0%
!!! ATAAATATTTTGTGATTAGT+AGG - chr3_1:2761549-2761568 Msa0344310:CDS 15.0%
!!! TATTTATTTTTGTTTCGAAT+TGG - chr3_1:2761983-2762002 Msa0344310:intron 15.0%
!!! ATTCGAATTTAATTTGATTT+AGG + chr3_1:2762871-2762890 None:intergenic 15.0%
!! ATATTTCCATAGTAATAATT+TGG - chr3_1:2762889-2762908 Msa0344310:CDS 15.0%
!! GATAATAATGAATAAAAGAA+AGG - chr3_1:2762949-2762968 Msa0344310:CDS 15.0%
!! ATAATTAAGTCATAATTTCT+TGG - chr3_1:2763423-2763442 Msa0344310:CDS 15.0%
!!! TTCTTTATTTTATTTGGAAT+AGG - chr3_1:2763471-2763490 Msa0344310:CDS 15.0%
!! TCTGGATTTAAGAATTATTA+TGG - chr3_1:2754765-2754784 Msa0344310:intron 20.0%
!! TTAGAATTTCTGCAATTAAA+CGG + chr3_1:2755828-2755847 None:intergenic 20.0%
!! GTACCTATTATGAAATTTAT+GGG - chr3_1:2756044-2756063 Msa0344310:intron 20.0%
!! GTAAATTTATGTTATGATAC+TGG - chr3_1:2756238-2756257 Msa0344310:CDS 20.0%
!!! AAGAAATGAATCCTAATTTT+AGG - chr3_1:2756728-2756747 Msa0344310:intron 20.0%
!! GAATATATAATTTCTTGCTA+CGG - chr3_1:2756919-2756938 Msa0344310:CDS 20.0%
!!! AATTTTATTTTTCCATTCGA+GGG + chr3_1:2757456-2757475 None:intergenic 20.0%
!!! AAATTTTATTTTTCCATTCG+AGG + chr3_1:2757457-2757476 None:intergenic 20.0%
!! TCTATATTACATATAAAAGC+AGG + chr3_1:2757522-2757541 None:intergenic 20.0%
!!! TGAACTAATAGAAAACTTTT+TGG + chr3_1:2757597-2757616 None:intergenic 20.0%
!!! TTATTAAGTTTGAAGACTTT+TGG - chr3_1:2757958-2757977 Msa0344310:CDS 20.0%
!!! TCACGATACTTTTTATTTAT+TGG - chr3_1:2758068-2758087 Msa0344310:CDS 20.0%
!!! CAAAACAAAATACTTTTTCT+TGG + chr3_1:2758689-2758708 None:intergenic 20.0%
!!! CAAGAAAAAGTATTTTGTTT+TGG - chr3_1:2758687-2758706 Msa0344310:intron 20.0%
!!! AAAAGTATTTTGTTTTGGTT+CGG - chr3_1:2758692-2758711 Msa0344310:intron 20.0%
!! GGTATTTCATATAAAATTAC+AGG + chr3_1:2758718-2758737 None:intergenic 20.0%
!! GTTGTCAATTATATTCTTTA+TGG - chr3_1:2758808-2758827 Msa0344310:intron 20.0%
!! TTGGAATGAATAGAAAAAAA+TGG + chr3_1:2759099-2759118 None:intergenic 20.0%
!!! ATTTTTTTCTATTCATTCCA+AGG - chr3_1:2759098-2759117 Msa0344310:intron 20.0%
!!! TGATTTTTTAATTTTTGCCT+TGG + chr3_1:2759118-2759137 None:intergenic 20.0%
!! TATGTTGTTGAATAGAAATA+AGG - chr3_1:2759164-2759183 Msa0344310:intron 20.0%
!! TGATATTTAACATTGTTGAA+TGG + chr3_1:2759240-2759259 None:intergenic 20.0%
!! AACAATGTTAAATATCACAA+TGG - chr3_1:2759243-2759262 Msa0344310:intron 20.0%
!! ACAATGTTAAATATCACAAT+GGG - chr3_1:2759244-2759263 Msa0344310:intron 20.0%
!! AATAAAAATTTCCAACTTGA+CGG + chr3_1:2759331-2759350 None:intergenic 20.0%
!! TGTATAGCTAAAATGAAAAA+TGG - chr3_1:2759599-2759618 Msa0344310:intron 20.0%
!! TTTGGTTAATAAAATCCAAA+AGG - chr3_1:2759979-2759998 Msa0344310:intron 20.0%
!! TAATTTCGATATGTCTATTA+TGG + chr3_1:2760030-2760049 None:intergenic 20.0%
!!! TTAAAGAGAATGTTGTTTTA+GGG - chr3_1:2760314-2760333 Msa0344310:intron 20.0%
!!! AATCAAATAATTTTCTGTGA+TGG + chr3_1:2760461-2760480 None:intergenic 20.0%
!! ATGACCTGATTATATATTAA+CGG - chr3_1:2760615-2760634 Msa0344310:CDS 20.0%
!!! CAATTATTTATTGCTATTTC+AGG - chr3_1:2760672-2760691 Msa0344310:CDS 20.0%
!! GATAAATGACAAAAAGATAT+TGG - chr3_1:2760743-2760762 Msa0344310:CDS 20.0%
!! TATGTTAATAAAAAATGGCT+CGG - chr3_1:2761030-2761049 Msa0344310:CDS 20.0%
!! ATCAACGATTATTACAATAT+CGG + chr3_1:2761235-2761254 None:intergenic 20.0%
!! AAAATTATAAAGTTACCTCA+TGG - chr3_1:2762027-2762046 Msa0344310:intron 20.0%
!! GTAGTATTTATATCATTTGT+GGG + chr3_1:2762066-2762085 None:intergenic 20.0%
!! AGTAGTATTTATATCATTTG+TGG + chr3_1:2762067-2762086 None:intergenic 20.0%
!!! AAATCTTCTAAGATGTTAAT+CGG + chr3_1:2762195-2762214 None:intergenic 20.0%
!!! TTTTGATAACTAATCAATGA+TGG + chr3_1:2762412-2762431 None:intergenic 20.0%
!! TTAAATGTGAATGAATGAAA+CGG + chr3_1:2762822-2762841 None:intergenic 20.0%
!! TAGGAAAATCAAATAAACTT+TGG + chr3_1:2762852-2762871 None:intergenic 20.0%
!! TAAAAGAAAGGACAAAAAAT+AGG - chr3_1:2762961-2762980 Msa0344310:CDS 20.0%
!! AAAAGAAAGGACAAAAAATA+GGG - chr3_1:2762962-2762981 Msa0344310:CDS 20.0%
!!! GGTATTGAATAATTCAAAAA+TGG - chr3_1:2763209-2763228 Msa0344310:CDS 20.0%
!!! AAAGTAGGTTTTTTAACTAC+GGG + chr3_1:2754601-2754620 None:intergenic 25.0%
!!! GAAAGTAGGTTTTTTAACTA+CGG + chr3_1:2754602-2754621 None:intergenic 25.0%
! AATTATTATGGATTCTTCGT+TGG - chr3_1:2754777-2754796 Msa0344310:intron 25.0%
!!! AGGAAGAAGAAAGAATTTTT+TGG - chr3_1:2754867-2754886 Msa0344310:intron 25.0%
!!! ATTCTGGTTCTATATTTGTT+CGG + chr3_1:2754924-2754943 None:intergenic 25.0%
! TCTATAGAAGAGTTATCTAT+CGG - chr3_1:2755040-2755059 Msa0344310:intron 25.0%
!!! TAGATCTACTTGTTGTTAAT+AGG + chr3_1:2755083-2755102 None:intergenic 25.0%
! AGTAATGTGTCAAGAAAAAT+TGG - chr3_1:2755116-2755135 Msa0344310:intron 25.0%
!! ATCGTTTTCAGATATAATTG+AGG - chr3_1:2755218-2755237 Msa0344310:intron 25.0%
!! TCGTTTTCAGATATAATTGA+GGG - chr3_1:2755219-2755238 Msa0344310:intron 25.0%
! AAATACTTCAAGAAGTTATG+CGG - chr3_1:2755472-2755491 Msa0344310:intron 25.0%
!!! TTTCAACCTATTTTAGTAGA+AGG - chr3_1:2755552-2755571 Msa0344310:intron 25.0%
! TCATAGGAATTGCAAAAAAA+GGG + chr3_1:2755899-2755918 None:intergenic 25.0%
! ATCATAGGAATTGCAAAAAA+AGG + chr3_1:2755900-2755919 None:intergenic 25.0%
!! TAAATTTCGATAGTCCTTTT+TGG - chr3_1:2755948-2755967 Msa0344310:CDS 25.0%
! GGTACCTATTATGAAATTTA+TGG - chr3_1:2756043-2756062 Msa0344310:intron 25.0%
! ATGCCCATAAATTTCATAAT+AGG + chr3_1:2756050-2756069 None:intergenic 25.0%
! TGATTAGATACCATATGAAT+AGG + chr3_1:2756188-2756207 None:intergenic 25.0%
! ATGGTATCTAATCATATAGA+TGG - chr3_1:2756194-2756213 Msa0344310:CDS 25.0%
! ATAACATAAATTTACCTAGC+TGG + chr3_1:2756233-2756252 None:intergenic 25.0%
! CGTGAATAAACATAAAGAAA+AGG - chr3_1:2756299-2756318 Msa0344310:intron 25.0%
! AATGAATTTGAGTCAATGAT+TGG + chr3_1:2756332-2756351 None:intergenic 25.0%
!! CTTTTAACAATACCTTCTAA+AGG - chr3_1:2756574-2756593 Msa0344310:intron 25.0%
!! TGAACAACAAAGTTCTATTT+TGG - chr3_1:2756615-2756634 Msa0344310:intron 25.0%
! TTGGAAAAACATAATCAGTA+TGG - chr3_1:2756634-2756653 Msa0344310:intron 25.0%
! TGGAAAAACATAATCAGTAT+GGG - chr3_1:2756635-2756654 Msa0344310:intron 25.0%
!!! ATTATATGGACTGGATTAAA+GGG + chr3_1:2756763-2756782 None:intergenic 25.0%
! GTTTGTATCAAAATTCTTTC+TGG + chr3_1:2757099-2757118 None:intergenic 25.0%
! AGAAATCAAGATATTGGAAT+TGG - chr3_1:2757177-2757196 Msa0344310:CDS 25.0%
!! ACATTAAGAACTTTTCATAC+TGG - chr3_1:2757390-2757409 Msa0344310:CDS 25.0%
!!! ATTTTATTTTTCCATTCGAG+GGG + chr3_1:2757455-2757474 None:intergenic 25.0%
!! ACTAATAGAAAACTTTTTGG+TGG + chr3_1:2757594-2757613 None:intergenic 25.0%
! CTATGAAAAATACCATTGAT+AGG + chr3_1:2758189-2758208 None:intergenic 25.0%
!!! TCTACTTTGATTTGGTATTT+TGG + chr3_1:2758351-2758370 None:intergenic 25.0%
! AAAATCGATCTACTTTGATT+TGG + chr3_1:2758359-2758378 None:intergenic 25.0%
! CTTCTTATATTGAAAGTGAT+TGG + chr3_1:2758465-2758484 None:intergenic 25.0%
! AACGGTAAAAAAAAAATGGA+AGG - chr3_1:2758616-2758635 Msa0344310:CDS 25.0%
!!! CAAAAAAAGTACTTCTATTG+AGG - chr3_1:2758912-2758931 Msa0344310:intron 25.0%
! TTTGTTGAAGTAAGTACAAA+CGG - chr3_1:2758949-2758968 Msa0344310:intron 25.0%
! ATGACAAAATTATCCAAGAT+CGG + chr3_1:2759194-2759213 None:intergenic 25.0%
! ATAAAAATTTCCAACTTGAC+GGG + chr3_1:2759330-2759349 None:intergenic 25.0%
! TTTCCAACTTGACAAAATAA+CGG - chr3_1:2759397-2759416 Msa0344310:intron 25.0%
! AAATACCAATTCAAATGGAA+TGG + chr3_1:2759509-2759528 None:intergenic 25.0%
! GTAGAAAATACCAATTCAAA+TGG + chr3_1:2759514-2759533 None:intergenic 25.0%
!! ACGTTTACAATAATTAGTCT+TGG - chr3_1:2759554-2759573 Msa0344310:intron 25.0%
!! ACCACATCTAAAACTAAAAT+CGG - chr3_1:2759622-2759641 Msa0344310:intron 25.0%
! TCAAGTTATAACTGTTCAAA+TGG - chr3_1:2759646-2759665 Msa0344310:intron 25.0%
! GGATTCTGTAATAATAAGAT+CGG - chr3_1:2759667-2759686 Msa0344310:intron 25.0%
! CTAAAATATCTCCTTGATAA+AGG + chr3_1:2759748-2759767 None:intergenic 25.0%
! ATATATGAAAAATCGAGATC+CGG - chr3_1:2759776-2759795 Msa0344310:intron 25.0%
!!! ATGTCTAATGTATTTTTACC+CGG - chr3_1:2760094-2760113 Msa0344310:intron 25.0%
! AATAATCCAATTAATTCACC+GGG + chr3_1:2760115-2760134 None:intergenic 25.0%
! CAATAATCCAATTAATTCAC+CGG + chr3_1:2760116-2760135 None:intergenic 25.0%
! TTATTCCCAATAATAAAGCT+CGG + chr3_1:2760183-2760202 None:intergenic 25.0%
!!! CTTAAAGAGAATGTTGTTTT+AGG - chr3_1:2760313-2760332 Msa0344310:intron 25.0%
!!! TAAAGAGAATGTTGTTTTAG+GGG - chr3_1:2760315-2760334 Msa0344310:intron 25.0%
! CTGTGATACATTAGAAATAT+AGG - chr3_1:2760502-2760521 Msa0344310:CDS 25.0%
! ATCAAATGACTGCATTTAAA+GGG + chr3_1:2760561-2760580 None:intergenic 25.0%
! AATCAAATGACTGCATTTAA+AGG + chr3_1:2760562-2760581 None:intergenic 25.0%
! TTAAATGCAGTCATTTGATT+TGG - chr3_1:2760562-2760581 Msa0344310:CDS 25.0%
! GGAAAACAATTCTTAATTGT+TGG - chr3_1:2760949-2760968 Msa0344310:CDS 25.0%
! TCAACGATTATTACAATATC+GGG + chr3_1:2761234-2761253 None:intergenic 25.0%
!!! ATTAGTTTTTGCAATTTGTG+AGG - chr3_1:2761407-2761426 Msa0344310:CDS 25.0%
!!! TTAGTTTTTGCAATTTGTGA+GGG - chr3_1:2761408-2761427 Msa0344310:CDS 25.0%
! GTAGGTATTCAAAATAGAAA+AGG - chr3_1:2761567-2761586 Msa0344310:CDS 25.0%
! AAGGAAATGAAAGTCAAATA+AGG - chr3_1:2761586-2761605 Msa0344310:CDS 25.0%
! ATGAAAGTCAAATAAGGAAA+TGG - chr3_1:2761592-2761611 Msa0344310:CDS 25.0%
!!! TATATTTTTTTTTAGAGGGC+AGG - chr3_1:2761648-2761667 Msa0344310:CDS 25.0%
!!! ATATTTTTTTTTAGAGGGCA+GGG - chr3_1:2761649-2761668 Msa0344310:CDS 25.0%
! AACATTTCTATTGGCAAATA+GGG - chr3_1:2761746-2761765 Msa0344310:CDS 25.0%
! ATATTCAAAGAAATTCTGAC+CGG + chr3_1:2761878-2761897 None:intergenic 25.0%
! AGAAACAAAGTTCCAATAAA+CGG + chr3_1:2761964-2761983 None:intergenic 25.0%
!! GGTAACTTTATAATTTTCCA+AGG + chr3_1:2762024-2762043 None:intergenic 25.0%
!!! AAAAAAGGATTGGCTTATTT+TGG - chr3_1:2762138-2762157 Msa0344310:intron 25.0%
! CATTGGAGTAAAATACAAAT+TGG + chr3_1:2762449-2762468 None:intergenic 25.0%
! TAGATTGGGAACTATAATTT+CGG - chr3_1:2762725-2762744 Msa0344310:CDS 25.0%
! GAAAGACCAAATTATTACTA+TGG + chr3_1:2762898-2762917 None:intergenic 25.0%
! TTATTCATTATTATCCCACA+TGG + chr3_1:2762944-2762963 None:intergenic 25.0%
!!! AAGACAACTCTTAGTTTTTT+AGG - chr3_1:2763028-2763047 Msa0344310:CDS 25.0%
!!! AGACAACTCTTAGTTTTTTA+GGG - chr3_1:2763029-2763048 Msa0344310:CDS 25.0%
! TAGATTCAATAGGATTCAAT+AGG + chr3_1:2763078-2763097 None:intergenic 25.0%
! ATTGAATCCTATTGAATCTA+AGG - chr3_1:2763078-2763097 Msa0344310:CDS 25.0%
! AGTTATACCTTAGATTCAAT+AGG + chr3_1:2763088-2763107 None:intergenic 25.0%
!! GAATCTAAGGTATAACTAAT+TGG - chr3_1:2763091-2763110 Msa0344310:CDS 25.0%
! AGAACGAAGAATTAAAAGAA+TGG - chr3_1:2763248-2763267 Msa0344310:CDS 25.0%
! TGTATTCACAAAAAACTACA+TGG - chr3_1:2763302-2763321 Msa0344310:CDS 25.0%
!! ATGGAAGCTTTAACTATTTA+TGG - chr3_1:2763682-2763701 Msa0344310:CDS 25.0%
!! TGGAAGCTTTAACTATTTAT+GGG - chr3_1:2763683-2763702 Msa0344310:CDS 25.0%
AGCAAACGAAAAATTTGGAT+AGG + chr3_1:2754575-2754594 None:intergenic 30.0%
! ATCCAAATTTTTCGTTTGCT+AGG - chr3_1:2754575-2754594 Msa0344310:CDS 30.0%
TCGAATATGAAATCCAATCT+TGG - chr3_1:2754641-2754660 Msa0344310:CDS 30.0%
! CGAAATAGAGAAATTTCTAG+TGG - chr3_1:2754712-2754731 Msa0344310:CDS 30.0%
TTGGTAGAATGGAAAGAATT+AGG - chr3_1:2754796-2754815 Msa0344310:intron 30.0%
CACTGACAATGAAAATGAAT+GGG - chr3_1:2754831-2754850 Msa0344310:intron 30.0%
GAACAAATATAGAACCAGAA+TGG - chr3_1:2754923-2754942 Msa0344310:intron 30.0%
AAATATAGAACCAGAATGGA+TGG - chr3_1:2754927-2754946 Msa0344310:intron 30.0%
TTGAATAATCGGTCTCAATT+CGG + chr3_1:2754980-2754999 None:intergenic 30.0%
AGACCGATTATTCAAATAGA+TGG - chr3_1:2754985-2755004 Msa0344310:intron 30.0%
CCTCCATCTATTTGAATAAT+CGG + chr3_1:2754991-2755010 None:intergenic 30.0%
CGATTATTCAAATAGATGGA+GGG - chr3_1:2754989-2755008 Msa0344310:intron 30.0%
!! TGGAAAACGAGTTGATTATT+CGG - chr3_1:2755272-2755291 Msa0344310:intron 30.0%
TTTCAGACATTTCTAATTCG+TGG - chr3_1:2755372-2755391 Msa0344310:intron 30.0%
! AAACATTTTGCTTCGAACAT+AGG - chr3_1:2755405-2755424 Msa0344310:intron 30.0%
GAGTTGCTAAGAGTAAAATA+CGG - chr3_1:2755427-2755446 Msa0344310:intron 30.0%
AGTTGCTAAGAGTAAAATAC+GGG - chr3_1:2755428-2755447 Msa0344310:intron 30.0%
! TGAAGTATTTCCCATACAAT+CGG + chr3_1:2755462-2755481 None:intergenic 30.0%
AATACTTCAAGAAGTTATGC+GGG - chr3_1:2755473-2755492 Msa0344310:intron 30.0%
TTTACATCCATTAGTGTGTA+AGG - chr3_1:2755587-2755606 Msa0344310:intron 30.0%
TTACATCCATTAGTGTGTAA+GGG - chr3_1:2755588-2755607 Msa0344310:intron 30.0%
TTCCGCTAGTTAATACATAA+AGG + chr3_1:2755773-2755792 None:intergenic 30.0%
! GAAGTTCACTATGAATCTTT+TGG - chr3_1:2756022-2756041 Msa0344310:intron 30.0%
ATATACATTAGAACCACTGT+TGG - chr3_1:2756109-2756128 Msa0344310:intron 30.0%
AAAAGAAATATGACCAACAG+TGG + chr3_1:2756125-2756144 None:intergenic 30.0%
GAAATTGAAGAAGCTATACA+AGG - chr3_1:2756151-2756170 Msa0344310:CDS 30.0%
GTTATTGTGAAAGACTAGAT+TGG + chr3_1:2756407-2756426 None:intergenic 30.0%
TCTGCTAATAAGTCGTTTAA+TGG + chr3_1:2756446-2756465 None:intergenic 30.0%
AGCAGATTAATAGACCATTT+CGG - chr3_1:2756460-2756479 Msa0344310:intron 30.0%
ATTAATAGACCATTTCGGAA+TGG - chr3_1:2756465-2756484 Msa0344310:intron 30.0%
ACTGCTACATCTATTTCATT+AGG - chr3_1:2756541-2756560 Msa0344310:intron 30.0%
! TAACAATACCTTCTAAAGGA+TGG - chr3_1:2756578-2756597 Msa0344310:intron 30.0%
CATACCATATTTCAATGGAT+TGG + chr3_1:2756687-2756706 None:intergenic 30.0%
TGTAGCATACCATATTTCAA+TGG + chr3_1:2756692-2756711 None:intergenic 30.0%
!! TTATATGGACTGGATTAAAG+GGG + chr3_1:2756762-2756781 None:intergenic 30.0%
!! CATTATATGGACTGGATTAA+AGG + chr3_1:2756764-2756783 None:intergenic 30.0%
GAAAAAGACATTATATGGAC+TGG + chr3_1:2756772-2756791 None:intergenic 30.0%
! GTCCATATAATGTCTTTTTC+AGG - chr3_1:2756772-2756791 Msa0344310:intron 30.0%
CTCCTGAAAAAGACATTATA+TGG + chr3_1:2756777-2756796 None:intergenic 30.0%
AAATCAATCATTTGTCCTTG+TGG + chr3_1:2756859-2756878 None:intergenic 30.0%
! TCTCGTAAATTGCTTTGAAT+GGG + chr3_1:2756883-2756902 None:intergenic 30.0%
! TTCTCGTAAATTGCTTTGAA+TGG + chr3_1:2756884-2756903 None:intergenic 30.0%
ATTCAAAGCAATTTACGAGA+AGG - chr3_1:2756883-2756902 Msa0344310:CDS 30.0%
ATTTCTGTAAATACCCGAAA+TGG - chr3_1:2757066-2757085 Msa0344310:CDS 30.0%
! TTTCTGGTATCATTCCATTT+CGG + chr3_1:2757083-2757102 None:intergenic 30.0%
GTAGCAGACGATATATATAT+CGG - chr3_1:2757135-2757154 Msa0344310:CDS 30.0%
!! ACGATATATATATCGGTTCA+CGG - chr3_1:2757142-2757161 Msa0344310:CDS 30.0%
GTCGTTAGAAATCAAGATAT+TGG - chr3_1:2757171-2757190 Msa0344310:CDS 30.0%
ATTATTGCTGGTCAATCTAT+TGG - chr3_1:2757348-2757367 Msa0344310:CDS 30.0%
! TTAAGAACTTTTCATACTGG+TGG - chr3_1:2757393-2757412 Msa0344310:CDS 30.0%
!!! TTTTATTTTTCCATTCGAGG+GGG + chr3_1:2757454-2757473 None:intergenic 30.0%
CATATTTATTCTGACTCAGA+AGG - chr3_1:2757705-2757724 Msa0344310:intron 30.0%
TATACAAAAATTCGGATGCA+TGG + chr3_1:2757758-2757777 None:intergenic 30.0%
AGTCATTTATGGATCTTATC+AGG - chr3_1:2757803-2757822 Msa0344310:intron 30.0%
!!! AATCCATTTTTTACTTCGCA+AGG - chr3_1:2757847-2757866 Msa0344310:intron 30.0%
!! AACATTGATTCTCTTTCTAC+TGG - chr3_1:2757884-2757903 Msa0344310:intron 30.0%
! AGACTTTTGGTACAAAAGAA+AGG - chr3_1:2757971-2757990 Msa0344310:CDS 30.0%
! GACTTTTGGTACAAAAGAAA+GGG - chr3_1:2757972-2757991 Msa0344310:CDS 30.0%
TACGGATCATTCTCATTTAA+TGG - chr3_1:2758032-2758051 Msa0344310:CDS 30.0%
!! AAAGTATCGTGAAAAATAGC+AGG + chr3_1:2758060-2758079 None:intergenic 30.0%
! GAAATCTATTTCTTCGTCTT+TGG + chr3_1:2758095-2758114 None:intergenic 30.0%
TCCATTGAAATACCTATCAA+TGG - chr3_1:2758174-2758193 Msa0344310:CDS 30.0%
ACCATTGATAGGTATTTCAA+TGG + chr3_1:2758178-2758197 None:intergenic 30.0%
TACCATTATGGAAGAAGATT+CGG + chr3_1:2758412-2758431 None:intergenic 30.0%
AATCTTCTTCCATAATGGTA+CGG - chr3_1:2758412-2758431 Msa0344310:CDS 30.0%
ACTATTATTCCGTACCATTA+TGG + chr3_1:2758424-2758443 None:intergenic 30.0%
AATAATAGTCTCGTTGGAAT+AGG - chr3_1:2758435-2758454 Msa0344310:CDS 30.0%
TTCAATATAAGAAGTCGAGT+AGG - chr3_1:2758471-2758490 Msa0344310:CDS 30.0%
!!! CATTTTTTTTTTACCGTTCC+GGG + chr3_1:2758614-2758633 None:intergenic 30.0%
!!! CCATTTTTTTTTTACCGTTC+CGG + chr3_1:2758615-2758634 None:intergenic 30.0%
ATAATTGGATCTATGTCCAA+TGG - chr3_1:2758653-2758672 Msa0344310:intron 30.0%
TTTACAAAATCGATACTGTC+CGG + chr3_1:2758739-2758758 None:intergenic 30.0%
ATGGAAATGGAAAATCCATT+CGG - chr3_1:2758827-2758846 Msa0344310:intron 30.0%
AACTAATTGAATCCTTGTGT+CGG + chr3_1:2758860-2758879 None:intergenic 30.0%
ACACAAGGATTCAATTAGTT+CGG - chr3_1:2758860-2758879 Msa0344310:intron 30.0%
!! GACTTGTTTAGTCTTGAATT+GGG - chr3_1:2758882-2758901 Msa0344310:intron 30.0%
!! AAAAAGTACTTCTATTGAGG+AGG - chr3_1:2758915-2758934 Msa0344310:intron 30.0%
GTTTGTACTTACTTCAACAA+AGG + chr3_1:2758950-2758969 None:intergenic 30.0%
AAATCACTTAGCCAAAATCA+CGG - chr3_1:2759132-2759151 Msa0344310:intron 30.0%
AATAATTCATTAGGCCCTTT+AGG - chr3_1:2759299-2759318 Msa0344310:intron 30.0%
ATAATTCATTAGGCCCTTTA+GGG - chr3_1:2759300-2759319 Msa0344310:intron 30.0%
!! TTTCCGTTATTTTGTCAAGT+TGG + chr3_1:2759403-2759422 None:intergenic 30.0%
AACGATATTACTGTCTAGAT+CGG + chr3_1:2759480-2759499 None:intergenic 30.0%
TGAATCCATTCCATTTGAAT+TGG - chr3_1:2759501-2759520 Msa0344310:intron 30.0%
! CCACATCTAAAACTAAAATC+GGG - chr3_1:2759623-2759642 Msa0344310:intron 30.0%
GATAAAGGATTTCTCCATAA+TGG + chr3_1:2759733-2759752 None:intergenic 30.0%
TATGGAGAAATCCTTTATCA+AGG - chr3_1:2759734-2759753 Msa0344310:intron 30.0%
! TCTAATATCTGTTCCACTTT+TGG + chr3_1:2759821-2759840 None:intergenic 30.0%
TCGAAAAAAGAATTGATGCT+TGG - chr3_1:2759873-2759892 Msa0344310:intron 30.0%
GAGTGTATAACAAGAATTCT+CGG - chr3_1:2759899-2759918 Msa0344310:intron 30.0%
TCAAATAACATCCAAAGTCT+TGG - chr3_1:2760057-2760076 Msa0344310:intron 30.0%
! TTTTTACCCGGTGAATTAAT+TGG - chr3_1:2760106-2760125 Msa0344310:intron 30.0%
!! TTGTTACCGAGCTTTATTAT+TGG - chr3_1:2760174-2760193 Msa0344310:intron 30.0%
!! TGTTACCGAGCTTTATTATT+GGG - chr3_1:2760175-2760194 Msa0344310:intron 30.0%
!!! AAAGAGAATGTTGTTTTAGG+GGG - chr3_1:2760316-2760335 Msa0344310:intron 30.0%
! GTGCATTATTCTTTTGAATC+CGG + chr3_1:2760359-2760378 None:intergenic 30.0%
TTGGCCGTTAATATATAATC+AGG + chr3_1:2760622-2760641 None:intergenic 30.0%
TATAAAAGAGAAGGTTCCAT+CGG - chr3_1:2760647-2760666 Msa0344310:CDS 30.0%
GCAATAAATAATTGTTCCGA+TGG + chr3_1:2760666-2760685 None:intergenic 30.0%
!! CATAACTTTTGAAGAGATGA+TGG - chr3_1:2760768-2760787 Msa0344310:CDS 30.0%
TTTATCAGAAGCTTGTGATT+TGG - chr3_1:2760906-2760925 Msa0344310:CDS 30.0%
TAATTGTCTCTTGAACATAG+CGG + chr3_1:2761163-2761182 None:intergenic 30.0%
CAAGAGACAATTATCTCATT+TGG - chr3_1:2761170-2761189 Msa0344310:CDS 30.0%
ATCTCATTTGGAAACATATC+TGG - chr3_1:2761182-2761201 Msa0344310:CDS 30.0%
TCTCATTTGGAAACATATCT+GGG - chr3_1:2761183-2761202 Msa0344310:CDS 30.0%
TGATCAGCAAGAAGAATATA+CGG - chr3_1:2761251-2761270 Msa0344310:CDS 30.0%
!! GTATCGATTAAACAAATCGT+TGG + chr3_1:2761306-2761325 None:intergenic 30.0%
!! AATTTTTAGATTTGGTTGGG+CGG - chr3_1:2761477-2761496 Msa0344310:CDS 30.0%
AAGTAGGTCAACATTTCTAT+TGG - chr3_1:2761737-2761756 Msa0344310:CDS 30.0%
CAACATTTCTATTGGCAAAT+AGG - chr3_1:2761745-2761764 Msa0344310:CDS 30.0%
ACATTTCTATTGGCAAATAG+GGG - chr3_1:2761747-2761766 Msa0344310:CDS 30.0%
TCAAGTACTTATTACCTCTT+GGG - chr3_1:2761786-2761805 Msa0344310:CDS 30.0%
!! ATTTTTGTTTCGAATTGGTC+AGG - chr3_1:2761988-2762007 Msa0344310:intron 30.0%
!! TTTTTGTTTCGAATTGGTCA+GGG - chr3_1:2761989-2762008 Msa0344310:intron 30.0%
TATGCGGGTATTTCAAAAAA+AGG - chr3_1:2762123-2762142 Msa0344310:intron 30.0%
GGGTATTTCAAAAAAAGGAT+TGG - chr3_1:2762128-2762147 Msa0344310:intron 30.0%
ATGTTAATCGGTAAAAGGAT+TGG + chr3_1:2762183-2762202 None:intergenic 30.0%
CTAAGATGTTAATCGGTAAA+AGG + chr3_1:2762188-2762207 None:intergenic 30.0%
AGTCGAAAACTAAGTGATAA+GGG + chr3_1:2762225-2762244 None:intergenic 30.0%
AAGTCGAAAACTAAGTGATA+AGG + chr3_1:2762226-2762245 None:intergenic 30.0%
!! TCACTTAGTTTTCGACTTTT+CGG - chr3_1:2762228-2762247 Msa0344310:intron 30.0%
AATAATCCCAGAAACATAAC+AGG + chr3_1:2762320-2762339 None:intergenic 30.0%
!! TTTCTGGGATTATTTACAAG+CGG - chr3_1:2762326-2762345 Msa0344310:intron 30.0%
TATATAGGTGAATCTATGGA+AGG - chr3_1:2762386-2762405 Msa0344310:intron 30.0%
TTAGATTAATTCGATCCATG+TGG - chr3_1:2762926-2762945 Msa0344310:CDS 30.0%
TAGATTAATTCGATCCATGT+GGG - chr3_1:2762927-2762946 Msa0344310:CDS 30.0%
!!! GACAACTCTTAGTTTTTTAG+GGG - chr3_1:2763030-2763049 Msa0344310:CDS 30.0%
!!! ATTACTTAGTCTGGCTTTTA+TGG - chr3_1:2763663-2763682 Msa0344310:CDS 30.0%
TTGGATAGGATCCAATAAGA+TGG + chr3_1:2754561-2754580 None:intergenic 35.0%
GGATACTGTATTTCCAAGAT+TGG + chr3_1:2754657-2754676 None:intergenic 35.0%
CTTGAGTAGCAAAAAAGAGT+GGG + chr3_1:2754678-2754697 None:intergenic 35.0%
ACGAGAACAATTAGTTGATC+TGG - chr3_1:2754747-2754766 Msa0344310:CDS 35.0%
ATGGAAAGAATTAGGAGAAG+AGG - chr3_1:2754804-2754823 Msa0344310:intron 35.0%
TGGAAAGAATTAGGAGAAGA+GGG - chr3_1:2754805-2754824 Msa0344310:intron 35.0%
! CCATTCATTTTCATTGTCAG+TGG + chr3_1:2754833-2754852 None:intergenic 35.0%
CCACTGACAATGAAAATGAA+TGG - chr3_1:2754830-2754849 Msa0344310:intron 35.0%
AGACATAAAACCATCCATTC+TGG + chr3_1:2754940-2754959 None:intergenic 35.0%
TGAATAATCGGTCTCAATTC+GGG + chr3_1:2754979-2754998 None:intergenic 35.0%
CCGATTATTCAAATAGATGG+AGG - chr3_1:2754988-2755007 Msa0344310:intron 35.0%
! ATTATCAAGGAGTGTATCCA+CGG + chr3_1:2755151-2755170 None:intergenic 35.0%
AGATATAATTGAGGGCAAAG+AGG - chr3_1:2755227-2755246 Msa0344310:intron 35.0%
GATATAATTGAGGGCAAAGA+GGG - chr3_1:2755228-2755247 Msa0344310:intron 35.0%
!! GGAAAACGAGTTGATTATTC+GGG - chr3_1:2755273-2755292 Msa0344310:intron 35.0%
!! GAAAACGAGTTGATTATTCG+GGG - chr3_1:2755274-2755293 Msa0344310:intron 35.0%
CATCGATGTAATGAAAGTGA+TGG + chr3_1:2755321-2755340 None:intergenic 35.0%
TCACTTTCATTACATCGATG+TGG - chr3_1:2755321-2755340 Msa0344310:intron 35.0%
!! ATAGCTCTATTGCTATTTCG+CGG + chr3_1:2755353-2755372 None:intergenic 35.0%
GGAAAAAGAACCGATTGTAT+GGG - chr3_1:2755449-2755468 Msa0344310:intron 35.0%
ATACTTCAAGAAGTTATGCG+GGG - chr3_1:2755474-2755493 Msa0344310:intron 35.0%
TTGAATCCCTTACACACTAA+TGG + chr3_1:2755597-2755616 None:intergenic 35.0%
GATTCAATGCAGACTTTGAT+GGG - chr3_1:2755610-2755629 Msa0344310:intron 35.0%
ATTCAATGCAGACTTTGATG+GGG - chr3_1:2755611-2755630 Msa0344310:intron 35.0%
TGTTCATGTGCCTTTATCTT+TGG - chr3_1:2755644-2755663 Msa0344310:intron 35.0%
!! AAGCATATCTTGAGTTGGTA+CGG + chr3_1:2755745-2755764 None:intergenic 35.0%
CCTATAAGCATATCTTGAGT+TGG + chr3_1:2755750-2755769 None:intergenic 35.0%
CCAACTCAAGATATGCTTAT+AGG - chr3_1:2755747-2755766 Msa0344310:intron 35.0%
GGCCTTTATGTATTAACTAG+CGG - chr3_1:2755768-2755787 Msa0344310:intron 35.0%
TGCAATTCCTATGATGCAAT+TGG - chr3_1:2755905-2755924 Msa0344310:CDS 35.0%
ATAAGCTCCAATTGCATCAT+AGG + chr3_1:2755915-2755934 None:intergenic 35.0%
GATTCATAGTGAACTTCGAT+AGG + chr3_1:2756019-2756038 None:intergenic 35.0%
! TTTTCTCGAGCCTATTCATA+TGG - chr3_1:2756175-2756194 Msa0344310:CDS 35.0%
TATGATACTGGCGTAAATTC+AGG - chr3_1:2756250-2756269 Msa0344310:intron 35.0%
GTCTTTCACAATAACGTGAT+AGG - chr3_1:2756412-2756431 Msa0344310:intron 35.0%
TTTCACAATAACGTGATAGG+TGG - chr3_1:2756415-2756434 Msa0344310:intron 35.0%
ATGTATATGCCATTCCGAAA+TGG + chr3_1:2756477-2756496 None:intergenic 35.0%
TGGATCAAGTAAAGACTCTA+GGG - chr3_1:2756506-2756525 Msa0344310:intron 35.0%
!! AACTTTGTTGTTCAGCATCT+TGG + chr3_1:2756609-2756628 None:intergenic 35.0%
TACGCCAATCCATTGAAATA+TGG - chr3_1:2756680-2756699 Msa0344310:intron 35.0%
TTCTGGTATCATTCCATTTC+GGG + chr3_1:2757082-2757101 None:intergenic 35.0%
AAGGGGGTTCGAATAAATAT+TGG + chr3_1:2757237-2757256 None:intergenic 35.0%
CTTAATGTTAGTTGAGTTCC+CGG + chr3_1:2757378-2757397 None:intergenic 35.0%
GATCCTTGCGAAGTAAAAAA+TGG + chr3_1:2757853-2757872 None:intergenic 35.0%
TCTTTCCTTCTTGAATCGAT+TGG + chr3_1:2758128-2758147 None:intergenic 35.0%
ATTTCAATGGAAACACCAGA+AGG + chr3_1:2758165-2758184 None:intergenic 35.0%
GAATTCTGTCTTCTGTATTG+AGG + chr3_1:2758240-2758259 None:intergenic 35.0%
CAATACAGAAGACAGAATTC+AGG - chr3_1:2758240-2758259 Msa0344310:CDS 35.0%
! GAAGATTTCATTGAGTATCG+AGG - chr3_1:2758309-2758328 Msa0344310:CDS 35.0%
GGTAAAATATGCACTTCTTC+GGG + chr3_1:2758390-2758409 None:intergenic 35.0%
GGGTAAAATATGCACTTCTT+CGG + chr3_1:2758391-2758410 None:intergenic 35.0%
ACCATTATGGAAGAAGATTC+GGG + chr3_1:2758411-2758430 None:intergenic 35.0%
AATATAAGAAGTCGAGTAGG+CGG - chr3_1:2758474-2758493 Msa0344310:CDS 35.0%
TATCAAGATAGAACTGTGTC+GGG + chr3_1:2758588-2758607 None:intergenic 35.0%
GTATCAAGATAGAACTGTGT+CGG + chr3_1:2758589-2758608 None:intergenic 35.0%
CCGGAACGGTAAAAAAAAAA+TGG - chr3_1:2758612-2758631 Msa0344310:CDS 35.0%
TCTTTCCTGGAATAGATCTT+GGG + chr3_1:2758770-2758789 None:intergenic 35.0%
ATTCCAGGAAAGAGATAATC+TGG - chr3_1:2758777-2758796 Msa0344310:intron 35.0%
TGGAAATGGAAAATCCATTC+GGG - chr3_1:2758828-2758847 Msa0344310:intron 35.0%
!! GGACTTGTTTAGTCTTGAAT+TGG - chr3_1:2758881-2758900 Msa0344310:intron 35.0%
!! TTAGTCTTGAATTGGGATCA+AGG - chr3_1:2758889-2758908 Msa0344310:intron 35.0%
TTACTTCAACAAAGGAAGAG+GGG + chr3_1:2758942-2758961 None:intergenic 35.0%
CTTACTTCAACAAAGGAAGA+GGG + chr3_1:2758943-2758962 None:intergenic 35.0%
ACTTACTTCAACAAAGGAAG+AGG + chr3_1:2758944-2758963 None:intergenic 35.0%
AGAAAAAGAAATGACCCATC+TGG - chr3_1:2759027-2759046 Msa0344310:intron 35.0%
ATTGATCGCGGATAATGAAT+CGG - chr3_1:2759056-2759075 Msa0344310:intron 35.0%
! TACGAATAGTTCCGTGATTT+TGG + chr3_1:2759146-2759165 None:intergenic 35.0%
ACGATATTACTGTCTAGATC+GGG + chr3_1:2759479-2759498 None:intergenic 35.0%
!!! CCCGATTTTAGTTTTAGATG+TGG + chr3_1:2759626-2759645 None:intergenic 35.0%
AAGACCTTGTGTTATATCAC+CGG + chr3_1:2759798-2759817 None:intergenic 35.0%
!! ATCTTCTGAAACCAAGACTT+TGG + chr3_1:2760071-2760090 None:intergenic 35.0%
AAAGTCTTGGTTTCAGAAGA+TGG - chr3_1:2760070-2760089 Msa0344310:intron 35.0%
GTAACAAATTGCTTCTTCCA+AGG + chr3_1:2760161-2760180 None:intergenic 35.0%
AGTTTCTTGAAAACTCGCTT+CGG + chr3_1:2760239-2760258 None:intergenic 35.0%
AAAGAATAATGCACCGTTCA+CGG - chr3_1:2760365-2760384 Msa0344310:intron 35.0%
! ATAGGATTGAATGCGCTTTT+AGG - chr3_1:2760520-2760539 Msa0344310:CDS 35.0%
! CCTTCTCTTTTATAGACGAT+TGG + chr3_1:2760641-2760660 None:intergenic 35.0%
CCAATCGTCTATAAAAGAGA+AGG - chr3_1:2760638-2760657 Msa0344310:CDS 35.0%
!! TATTGCTATTTCAGGATACC+TGG - chr3_1:2760680-2760699 Msa0344310:CDS 35.0%
AAAGTGAAAAAAACGAGACC+AGG + chr3_1:2760701-2760720 None:intergenic 35.0%
!! TTCATTTTGGCCATGATACT+CGG - chr3_1:2760800-2760819 Msa0344310:CDS 35.0%
! TCGAATGGCACCTTTTATAT+CGG - chr3_1:2760834-2760853 Msa0344310:CDS 35.0%
TTACGCTTTGCCGATATAAA+AGG + chr3_1:2760847-2760866 None:intergenic 35.0%
TTTATATCGGCAAAGCGTAA+AGG - chr3_1:2760847-2760866 Msa0344310:CDS 35.0%
! GTTAATAAAAAATGGCTCGG+AGG - chr3_1:2761033-2761052 Msa0344310:CDS 35.0%
GGGTGGCATAAAATATATGA+CGG - chr3_1:2761203-2761222 Msa0344310:CDS 35.0%
GGTGGCATAAAATATATGAC+GGG - chr3_1:2761204-2761223 Msa0344310:CDS 35.0%
GTGGCATAAAATATATGACG+GGG - chr3_1:2761205-2761224 Msa0344310:CDS 35.0%
TCTTCGAGAATGTATCACTT+TGG - chr3_1:2761275-2761294 Msa0344310:CDS 35.0%
CTTCGAGAATGTATCACTTT+GGG - chr3_1:2761276-2761295 Msa0344310:CDS 35.0%
TCGAAATATCTGCTAGATCT+GGG + chr3_1:2761338-2761357 None:intergenic 35.0%
ATCGAAATATCTGCTAGATC+TGG + chr3_1:2761339-2761358 None:intergenic 35.0%
CGGTCATAGATTTATGGAAT+CGG - chr3_1:2761497-2761516 Msa0344310:CDS 35.0%
CTCAAGTACTTATTACCTCT+TGG - chr3_1:2761785-2761804 Msa0344310:CDS 35.0%
CGGATTTCTAACAACTAGAA+TGG + chr3_1:2761839-2761858 None:intergenic 35.0%
ACTCAGATTGGAGAAGAATA+TGG - chr3_1:2761928-2761947 Msa0344310:intron 35.0%
!! TTTTGTTTCGAATTGGTCAG+GGG - chr3_1:2761990-2762009 Msa0344310:intron 35.0%
TGAAATACCCGCATAGAAAT+AGG + chr3_1:2762118-2762137 None:intergenic 35.0%
ACAGGTATAGGAACTACTAA+AGG + chr3_1:2762302-2762321 None:intergenic 35.0%
TCCTATACCTGTTATGTTTC+TGG - chr3_1:2762310-2762329 Msa0344310:intron 35.0%
CCTATACCTGTTATGTTTCT+GGG - chr3_1:2762311-2762330 Msa0344310:intron 35.0%
!! TATTTTTGCTACCTTAGCTG+CGG - chr3_1:2762361-2762380 Msa0344310:intron 35.0%
GGCTTATATAGGTGAATCTA+TGG - chr3_1:2762382-2762401 Msa0344310:intron 35.0%
AAAGGACAAAAAATAGGGTG+AGG - chr3_1:2762967-2762986 Msa0344310:CDS 35.0%
AAGGACAAAAAATAGGGTGA+GGG - chr3_1:2762968-2762987 Msa0344310:CDS 35.0%
TAGGATTCGAGAATCATTCT+TGG + chr3_1:2763059-2763078 None:intergenic 35.0%
! CCTAAATTTAGAGTAGTAGC+AGG + chr3_1:2763191-2763210 None:intergenic 35.0%
CCTGCTACTACTCTAAATTT+AGG - chr3_1:2763188-2763207 Msa0344310:CDS 35.0%
GGAATAGGAGAAACTTATCA+TGG - chr3_1:2763486-2763505 Msa0344310:CDS 35.0%
GGGTACTTTATTACTTAGTC+TGG - chr3_1:2763654-2763673 Msa0344310:CDS 35.0%
! AGCTTTAACTATTTATGGGC+TGG - chr3_1:2763687-2763706 Msa0344310:CDS 35.0%
GGCCTAGCAAACGAAAAATT+TGG + chr3_1:2754580-2754599 None:intergenic 40.0%
CCTCGTAATCGTAAGAAAGT+AGG + chr3_1:2754616-2754635 None:intergenic 40.0%
CCTACTTTCTTACGATTACG+AGG - chr3_1:2754613-2754632 Msa0344310:CDS 40.0%
CCTTGAGTAGCAAAAAAGAG+TGG + chr3_1:2754679-2754698 None:intergenic 40.0%
!!! CCACTCTTTTTTGCTACTCA+AGG - chr3_1:2754676-2754695 Msa0344310:CDS 40.0%
!! AGAGAAATTTCTAGTGGAGC+AGG - chr3_1:2754718-2754737 Msa0344310:CDS 40.0%
! TGGATTCTTCGTTGGTAGAA+TGG - chr3_1:2754785-2754804 Msa0344310:intron 40.0%
GAATGGGAAGATCGAAAAGT+AGG - chr3_1:2754847-2754866 Msa0344310:intron 40.0%
!!! GAATTTTTTGGTTCGACGCA+TGG - chr3_1:2754879-2754898 Msa0344310:intron 40.0%
TGGAGGGAAACTAATGAGTT+CGG - chr3_1:2755005-2755024 Msa0344310:intron 40.0%
ACAACAAGTAGATCTACACC+AGG - chr3_1:2755087-2755106 Msa0344310:intron 40.0%
CAACAAGTAGATCTACACCA+GGG - chr3_1:2755088-2755107 Msa0344310:intron 40.0%
AACAAGTAGATCTACACCAG+GGG - chr3_1:2755089-2755108 Msa0344310:intron 40.0%
TGACACATTACTAATTCCCC+TGG + chr3_1:2755108-2755127 None:intergenic 40.0%
AAAATTGGTACAAGAAGCCG+TGG - chr3_1:2755131-2755150 Msa0344310:intron 40.0%
GTGGATACACTCCTTGATAA+TGG - chr3_1:2755150-2755169 Msa0344310:intron 40.0%
TTATTATGACCGTCCCTCAT+TGG + chr3_1:2755189-2755208 None:intergenic 40.0%
!! TAGCTCTATTGCTATTTCGC+GGG + chr3_1:2755352-2755371 None:intergenic 40.0%
GGGAAAAAGAACCGATTGTA+TGG - chr3_1:2755448-2755467 Msa0344310:intron 40.0%
TACTTCAAGAAGTTATGCGG+GGG - chr3_1:2755475-2755494 Msa0344310:intron 40.0%
ATGCCCAATCTATGCAAAGT+AGG + chr3_1:2755525-2755544 None:intergenic 40.0%
TTTGCATAGATTGGGCATAC+AGG - chr3_1:2755527-2755546 Msa0344310:intron 40.0%
GCACGTCCTTCTACTAAAAT+AGG + chr3_1:2755561-2755580 None:intergenic 40.0%
GGATTCAATGCAGACTTTGA+TGG - chr3_1:2755609-2755628 Msa0344310:intron 40.0%
AGACTTTGATGGGGATCAAA+TGG - chr3_1:2755620-2755639 Msa0344310:intron 40.0%
TCATGTGCCTTTATCTTTGG+AGG - chr3_1:2755647-2755666 Msa0344310:intron 40.0%
TCATACAAACCTCTTGTCTC+CGG - chr3_1:2755701-2755720 Msa0344310:intron 40.0%
!! TCTTGAGTTGGTACGGAAAT+GGG + chr3_1:2755738-2755757 None:intergenic 40.0%
!! ATCTTGAGTTGGTACGGAAA+TGG + chr3_1:2755739-2755758 None:intergenic 40.0%
!! GTTAGTGTTGATATCCAGCT+AGG - chr3_1:2756216-2756235 Msa0344310:CDS 40.0%
ATATTCCACTCAGTGGGATT+CGG + chr3_1:2756361-2756380 None:intergenic 40.0%
!! GTGGAATATGGAGGTACTTA+TGG - chr3_1:2756372-2756391 Msa0344310:intron 40.0%
CTAGAGTCTTTACTTGATCC+AGG + chr3_1:2756507-2756526 None:intergenic 40.0%
CTGGATCAAGTAAAGACTCT+AGG - chr3_1:2756505-2756524 Msa0344310:intron 40.0%
TAGATGTAGCAGTAGCTTGA+CGG + chr3_1:2756534-2756553 None:intergenic 40.0%
TCAGTATGGGAATGTACATG+CGG - chr3_1:2756648-2756667 Msa0344310:intron 40.0%
GGGTCAGTCATCCTAAAATT+AGG + chr3_1:2756742-2756761 None:intergenic 40.0%
!!! ATGTCTTTTTCAGGAGCTAG+AGG - chr3_1:2756781-2756800 Msa0344310:intron 40.0%
TCTCAAGTGCACCAATTAGT+CGG - chr3_1:2756811-2756830 Msa0344310:intron 40.0%
ATCCTCTCATTCCGACTAAT+TGG + chr3_1:2756825-2756844 None:intergenic 40.0%
GGATTAATGTCAGATCCACA+AGG - chr3_1:2756841-2756860 Msa0344310:intron 40.0%
ACGTATTCCTACAGGTAAAG+GGG + chr3_1:2757254-2757273 None:intergenic 40.0%
GACGTATTCCTACAGGTAAA+GGG + chr3_1:2757255-2757274 None:intergenic 40.0%
AGACGTATTCCTACAGGTAA+AGG + chr3_1:2757256-2757275 None:intergenic 40.0%
TTACCTGTAGGAATACGTCT+TGG - chr3_1:2757256-2757275 Msa0344310:CDS 40.0%
GAAGCTGTAGGTATTATTGC+TGG - chr3_1:2757336-2757355 Msa0344310:CDS 40.0%
! ATACTGGTGGAGTATTCACA+GGG - chr3_1:2757406-2757425 Msa0344310:CDS 40.0%
! TAAAAGTATATGTTCCCGCG+CGG + chr3_1:2757662-2757681 None:intergenic 40.0%
CCTTCTTGAATCGATTGGAA+TGG + chr3_1:2758123-2758142 None:intergenic 40.0%
! CCATTCCAATCGATTCAAGA+AGG - chr3_1:2758120-2758139 Msa0344310:CDS 40.0%
ACCCGAATCTTCTTCCATAA+TGG - chr3_1:2758407-2758426 Msa0344310:CDS 40.0%
GTACGGAATAATAGTCTCGT+TGG - chr3_1:2758429-2758448 Msa0344310:CDS 40.0%
AGTTCTATCTTGATACCACC+CGG - chr3_1:2758593-2758612 Msa0344310:CDS 40.0%
!!! TTTTTTTTTACCGTTCCGGG+TGG + chr3_1:2758611-2758630 None:intergenic 40.0%
! TCTTGGTAGTTGTGATCCAT+TGG + chr3_1:2758672-2758691 None:intergenic 40.0%
CTCTTTCCTGGAATAGATCT+TGG + chr3_1:2758771-2758790 None:intergenic 40.0%
GTTCCAGATTATCTCTTTCC+TGG + chr3_1:2758783-2758802 None:intergenic 40.0%
GGAAATGGAAAATCCATTCG+GGG - chr3_1:2758829-2758848 Msa0344310:intron 40.0%
TACTTCAACAAAGGAAGAGG+GGG + chr3_1:2758941-2758960 None:intergenic 40.0%
! AGAAATGACCCATCTGGTTT+AGG - chr3_1:2759033-2759052 Msa0344310:intron 40.0%
CGATCAATCCTAAACCAGAT+GGG + chr3_1:2759044-2759063 None:intergenic 40.0%
! ATCTGGTTTAGGATTGATCG+CGG - chr3_1:2759044-2759063 Msa0344310:intron 40.0%
GAAATAAGGAATGCCGATCT+TGG - chr3_1:2759178-2759197 Msa0344310:intron 40.0%
AAGATCGGCTAACCCATATT+TGG - chr3_1:2759682-2759701 Msa0344310:intron 40.0%
TTCTCCATAATGGCCATGAA+TGG + chr3_1:2759723-2759742 None:intergenic 40.0%
AGATCCGGTGATATAACACA+AGG - chr3_1:2759791-2759810 Msa0344310:intron 40.0%
AACACAAGGTCTTCCAAAAG+TGG - chr3_1:2759805-2759824 Msa0344310:intron 40.0%
AAGAATTCTCGGCATTCCTT+GGG - chr3_1:2759910-2759929 Msa0344310:intron 40.0%
ATTCCTTGGGGATTCTTGAT+TGG - chr3_1:2759923-2759942 Msa0344310:intron 40.0%
AGCGCAAAGTCGTATTTCTT+TGG - chr3_1:2759961-2759980 Msa0344310:intron 40.0%
CAAAAGGTTTATCGATCCCA+GGG - chr3_1:2759995-2760014 Msa0344310:intron 40.0%
ATTATGGATGTGTACTCCCT+GGG + chr3_1:2760014-2760033 None:intergenic 40.0%
TATTATGGATGTGTACTCCC+TGG + chr3_1:2760015-2760034 None:intergenic 40.0%
! TTTTAGCAAAAGCCGCTCTT+CGG - chr3_1:2760266-2760285 Msa0344310:intron 40.0%
!! GGTCGTATTGATTGGTTGAA+AGG - chr3_1:2760289-2760308 Msa0344310:intron 40.0%
! TCTTTTGAATCCGGTACCAA+CGG + chr3_1:2760350-2760369 None:intergenic 40.0%
! TATATTGCGTTGACCGTGAA+CGG + chr3_1:2760381-2760400 None:intergenic 40.0%
!! TTTGAAGAGATGATGGAAGC+TGG - chr3_1:2760775-2760794 Msa0344310:CDS 40.0%
! ATGGAAGCTGGAGTTCATTT+TGG - chr3_1:2760787-2760806 Msa0344310:CDS 40.0%
GATTCCATTTCCGAGTATCA+TGG + chr3_1:2760813-2760832 None:intergenic 40.0%
!! GATATAAAAGGTGCCATTCG+AGG + chr3_1:2760835-2760854 None:intergenic 40.0%
! GTTTTTGATGCAGCAAGCAT+GGG - chr3_1:2760928-2760947 Msa0344310:CDS 40.0%
! TCGGAGGTATGTTAACGAAT+TGG - chr3_1:2761049-2761068 Msa0344310:CDS 40.0%
AAACGAGACTTCGTAAGTTC+AGG - chr3_1:2761082-2761101 Msa0344310:CDS 40.0%
AACGAGACTTCGTAAGTTCA+GGG - chr3_1:2761083-2761102 Msa0344310:CDS 40.0%
TAAGTTCAGGGACTTGAGAA+CGG - chr3_1:2761095-2761114 Msa0344310:CDS 40.0%
! AACATAGCGGCATCTCTTTT+TGG + chr3_1:2761150-2761169 None:intergenic 40.0%
CATTTGGAAACATATCTGGG+TGG - chr3_1:2761186-2761205 Msa0344310:CDS 40.0%
GCTATAGCATCATCATTAGC+TGG + chr3_1:2761363-2761382 None:intergenic 40.0%
GATATATCTGCTGTCGAAGT+AGG - chr3_1:2761721-2761740 Msa0344310:CDS 40.0%
GATAGCAATTACAACCCAAG+AGG + chr3_1:2761803-2761822 None:intergenic 40.0%
!! GTCAGTAGCCTATTTCTATG+CGG - chr3_1:2762107-2762126 Msa0344310:intron 40.0%
!! TCAGTAGCCTATTTCTATGC+GGG - chr3_1:2762108-2762127 Msa0344310:intron 40.0%
! GTAAAAGGATTGGAGTTGGT+TGG + chr3_1:2762173-2762192 None:intergenic 40.0%
ATCGGTAAAAGGATTGGAGT+TGG + chr3_1:2762177-2762196 None:intergenic 40.0%
CCCAGAAACATAACAGGTAT+AGG + chr3_1:2762314-2762333 None:intergenic 40.0%
AGGACAAAAAATAGGGTGAG+GGG - chr3_1:2762969-2762988 Msa0344310:CDS 40.0%
!!! CTTATTTTGTCCTCTGCTTC+CGG + chr3_1:2763634-2763653 None:intergenic 40.0%
GGAAGCAGAGGACAAAATAA+GGG - chr3_1:2763633-2763652 Msa0344310:CDS 40.0%
GAAGCAGAGGACAAAATAAG+GGG - chr3_1:2763634-2763653 Msa0344310:CDS 40.0%
! CCTTTGAAAATCGGACGTGA+GGG + chr3_1:2754531-2754550 None:intergenic 45.0%
! CCTCACGTCCGATTTTCAAA+GGG - chr3_1:2754529-2754548 Msa0344310:CDS 45.0%
! CTCACGTCCGATTTTCAAAG+GGG - chr3_1:2754530-2754549 Msa0344310:CDS 45.0%
! TCACGTCCGATTTTCAAAGG+GGG - chr3_1:2754531-2754550 Msa0344310:CDS 45.0%
! GGATCTCCCCCTTTGAAAAT+CGG + chr3_1:2754540-2754559 None:intergenic 45.0%
AAGGGGGAGATCCATCTTAT+TGG - chr3_1:2754547-2754566 Msa0344310:CDS 45.0%
ATAATCGGTCTCAATTCGGG+AGG + chr3_1:2754976-2754995 None:intergenic 45.0%
!! CTCCTTGATAATGGAATCCG+CGG - chr3_1:2755159-2755178 Msa0344310:intron 45.0%
AGATTTCGAGAGACTCTGCT+TGG - chr3_1:2755252-2755271 Msa0344310:intron 45.0%
!! AGCTCTATTGCTATTTCGCG+GGG + chr3_1:2755351-2755370 None:intergenic 45.0%
AGCGCCTACTTTGCATAGAT+TGG - chr3_1:2755518-2755537 Msa0344310:intron 45.0%
GCGCCTACTTTGCATAGATT+GGG - chr3_1:2755519-2755538 Msa0344310:intron 45.0%
GCTTGAGCCTCCAAAGATAA+AGG + chr3_1:2755657-2755676 None:intergenic 45.0%
TTAACTAGCGGAAATCGTCG+AGG - chr3_1:2755780-2755799 Msa0344310:intron 45.0%
! GTCGAGGTATTTGTGCAAAC+AGG - chr3_1:2755796-2755815 Msa0344310:intron 45.0%
!!! TCGATAGTCCTTTTTGGCTC+CGG - chr3_1:2755954-2755973 Msa0344310:intron 45.0%
! TGCATTGATCTATTCGCCAC+CGG + chr3_1:2755976-2755995 None:intergenic 45.0%
GAATCCCACTGAGTGGAATA+TGG - chr3_1:2756360-2756379 Msa0344310:intron 45.0%
ACCTCCATATTCCACTCAGT+GGG + chr3_1:2756367-2756386 None:intergenic 45.0%
TACCTCCATATTCCACTCAG+TGG + chr3_1:2756368-2756387 None:intergenic 45.0%
!! TGGAGGTACTTATGGCAGAA+CGG - chr3_1:2756380-2756399 Msa0344310:intron 45.0%
GGCATATACATCACACATCC+TGG - chr3_1:2756486-2756505 Msa0344310:intron 45.0%
!! TGGACTAGCCATCCTTTAGA+AGG + chr3_1:2756589-2756608 None:intergenic 45.0%
CACCAATTAGTCGGAATGAG+AGG - chr3_1:2756820-2756839 Msa0344310:intron 45.0%
AGTATCCACAACCCCTTTAC+GGG + chr3_1:2756947-2756966 None:intergenic 45.0%
CAGTATCCACAACCCCTTTA+CGG + chr3_1:2756948-2756967 None:intergenic 45.0%
!! TACACGTCGACTTGTTGAAG+TGG - chr3_1:2756996-2757015 Msa0344310:CDS 45.0%
GTTGTACGTCGAACAGATTG+CGG - chr3_1:2757030-2757049 Msa0344310:CDS 45.0%
CGTATTCCTACAGGTAAAGG+GGG + chr3_1:2757253-2757272 None:intergenic 45.0%
GATCCAAGACGTATTCCTAC+AGG + chr3_1:2757262-2757281 None:intergenic 45.0%
! TGGATCTGCCGATTGTGTTA+TGG - chr3_1:2757276-2757295 Msa0344310:CDS 45.0%
! GGATCTGCCGATTGTGTTAT+GGG - chr3_1:2757277-2757296 Msa0344310:CDS 45.0%
GTAGAATTGGGAGAAGCTGT+AGG - chr3_1:2757324-2757343 Msa0344310:CDS 45.0%
TGGTCAATCTATTGGCGAAC+CGG - chr3_1:2757356-2757375 Msa0344310:CDS 45.0%
! CATACTGGTGGAGTATTCAC+AGG - chr3_1:2757405-2757424 Msa0344310:CDS 45.0%
! TACTGGTGGAGTATTCACAG+GGG - chr3_1:2757407-2757426 Msa0344310:CDS 45.0%
ATCCATGACGTGTACGTGTA+GGG + chr3_1:2757497-2757516 None:intergenic 45.0%
TATCCATGACGTGTACGTGT+AGG + chr3_1:2757498-2757517 None:intergenic 45.0%
ACTCAGAAGGCGAAATGCAT+TGG - chr3_1:2757718-2757737 Msa0344310:intron 45.0%
TTCGGATGCATGGTACACAT+CGG + chr3_1:2757748-2757767 None:intergenic 45.0%
TCTTATCAGGAAAGTCGTGC+AGG - chr3_1:2757816-2757835 Msa0344310:intron 45.0%
AACGAACTAATGCGACCTTC+TGG - chr3_1:2758147-2758166 Msa0344310:CDS 45.0%
GGATATCTTATCCCTCTCTC+GGG + chr3_1:2758567-2758586 None:intergenic 45.0%
GGGATATCTTATCCCTCTCT+CGG + chr3_1:2758568-2758587 None:intergenic 45.0%
TATCTTGATACCACCCGGAA+CGG - chr3_1:2758598-2758617 Msa0344310:CDS 45.0%
GCGATCAATCCTAAACCAGA+TGG + chr3_1:2759045-2759064 None:intergenic 45.0%
TCGCGGATAATGAATCGGAT+CGG - chr3_1:2759061-2759080 Msa0344310:intron 45.0%
GCAACCATTCATGGCCATTA+TGG - chr3_1:2759716-2759735 Msa0344310:intron 45.0%
CAAGAATTCTCGGCATTCCT+TGG - chr3_1:2759909-2759928 Msa0344310:intron 45.0%
AGAATTCTCGGCATTCCTTG+GGG - chr3_1:2759911-2759930 Msa0344310:intron 45.0%
! CCTGGGATCGATAAACCTTT+TGG + chr3_1:2759997-2760016 None:intergenic 45.0%
CCAAAAGGTTTATCGATCCC+AGG - chr3_1:2759994-2760013 Msa0344310:intron 45.0%
TTATTGCGAGCAGAACGAAC+TGG - chr3_1:2760130-2760149 Msa0344310:intron 45.0%
TATTGCGAGCAGAACGAACT+GGG - chr3_1:2760131-2760150 Msa0344310:intron 45.0%
TTTAGCAAAAGCCGCTCTTC+GGG - chr3_1:2760267-2760286 Msa0344310:intron 45.0%
! CTTTTGAATCCGGTACCAAC+GGG + chr3_1:2760349-2760368 None:intergenic 45.0%
TTGGCCATGATACTCGGAAA+TGG - chr3_1:2760806-2760825 Msa0344310:CDS 45.0%
TCGGAAATGGAATCCTCGAA+TGG - chr3_1:2760819-2760838 Msa0344310:CDS 45.0%
! GGTTTTTGATGCAGCAAGCA+TGG - chr3_1:2760927-2760946 Msa0344310:CDS 45.0%
! AAGCAGCCGATTCAGTAACA+CGG - chr3_1:2760983-2761002 Msa0344310:CDS 45.0%
TTGAGAACGGAGCAAAAGAC+AGG - chr3_1:2761108-2761127 Msa0344310:CDS 45.0%
TGAGAACGGAGCAAAAGACA+GGG - chr3_1:2761109-2761128 Msa0344310:CDS 45.0%
GTTGGGCGGTCATAGATTTA+TGG - chr3_1:2761491-2761510 Msa0344310:CDS 45.0%
AAGAAATTCTGACCGGACGT+TGG + chr3_1:2761871-2761890 None:intergenic 45.0%
TCACGTCTCGGATGAATTCA+AGG + chr3_1:2761903-2761922 None:intergenic 45.0%
! TCTGAGTTTTGCTCACGTCT+CGG + chr3_1:2761915-2761934 None:intergenic 45.0%
GACGTGAGCAAAACTCAGAT+TGG - chr3_1:2761916-2761935 Msa0344310:intron 45.0%
TTGGAGAAGAATATGGTCCG+TGG - chr3_1:2761935-2761954 Msa0344310:intron 45.0%
TGGAGAAGAATATGGTCCGT+GGG - chr3_1:2761936-2761955 Msa0344310:intron 45.0%
GTTCCAATAAACGGAACCCA+CGG + chr3_1:2761955-2761974 None:intergenic 45.0%
ACCTTAGCTGCGGCTTATAT+AGG - chr3_1:2762371-2762390 Msa0344310:intron 45.0%
ACCTATATAAGCCGCAGCTA+AGG + chr3_1:2762375-2762394 None:intergenic 45.0%
GGACAAAAAATAGGGTGAGG+GGG - chr3_1:2762970-2762989 Msa0344310:CDS 45.0%
ACAGAAGCAGCAGAAATCAG+TGG + chr3_1:2763514-2763533 None:intergenic 45.0%
CGGAAGCAGAGGACAAAATA+AGG - chr3_1:2763632-2763651 Msa0344310:CDS 45.0%
!! AATGAATTATTATTATTAAT+TGG + chr3_1:2759290-2759309 None:intergenic 5.0%
!! ATTAATAATAATAATTCATT+AGG - chr3_1:2759290-2759309 Msa0344310:intron 5.0%
!! AGTAATTAAATATTATTTAA+TGG - chr3_1:2759430-2759449 Msa0344310:intron 5.0%
!!! ATATATATATTTTTTTTTAG+AGG - chr3_1:2761643-2761662 Msa0344310:CDS 5.0%
!!! TATATATATTTTTTTTTAGA+GGG - chr3_1:2761644-2761663 Msa0344310:CDS 5.0%
!! TAAATAAAAATAATATTCAT+TGG + chr3_1:2762466-2762485 None:intergenic 5.0%
! CCCTCACGTCCGATTTTCAA+AGG - chr3_1:2754528-2754547 Msa0344310:CDS 50.0%
! CCCTCACGTCCGATTTTCAA+AGG - chr3_1:2754528-2754547 Msa0344310:CDS 50.0%
! CCCTTTGAAAATCGGACGTG+AGG + chr3_1:2754532-2754551 None:intergenic 50.0%
CTCAATTCGGGAGGAAGAAC+TGG + chr3_1:2754967-2754986 None:intergenic 50.0%
GTCCGCGGATTCCATTATCA+AGG + chr3_1:2755164-2755183 None:intergenic 50.0%
AATCCGCGGACAACCAATGA+GGG - chr3_1:2755173-2755192 Msa0344310:CDS 50.0%
GGGCGTTCTGTTATTGTCGT+AGG - chr3_1:2755294-2755313 Msa0344310:intron 50.0%
GGCGCTCTATTCAGCAATAC+TGG + chr3_1:2755504-2755523 None:intergenic 50.0%
AACCTCTTGTCTCCGGCTAT+TGG - chr3_1:2755708-2755727 Msa0344310:intron 50.0%
ACCTCTTGTCTCCGGCTATT+GGG - chr3_1:2755709-2755728 Msa0344310:intron 50.0%
GAAATGGGATCCCCAATAGC+CGG + chr3_1:2755723-2755742 None:intergenic 50.0%
!!! ATAGTCCTTTTTGGCTCCGG+TGG - chr3_1:2755957-2755976 Msa0344310:intron 50.0%
TCCCACTGAGTGGAATATGG+AGG - chr3_1:2756363-2756382 Msa0344310:intron 50.0%
!! GGAGGTACTTATGGCAGAAC+GGG - chr3_1:2756381-2756400 Msa0344310:intron 50.0%
GCTGTACGAACATCAGATGC+TGG - chr3_1:2756967-2756986 Msa0344310:CDS 50.0%
ACAGATTGCGGTACGATTCG+CGG - chr3_1:2757042-2757061 Msa0344310:CDS 50.0%
TTCGAACCCCCTTTACCTGT+AGG - chr3_1:2757244-2757263 Msa0344310:CDS 50.0%
! TCTGCCGATTGTGTTATGGG+CGG - chr3_1:2757280-2757299 Msa0344310:CDS 50.0%
GACTCCGCCCATAACACAAT+CGG + chr3_1:2757287-2757306 None:intergenic 50.0%
TATGGGCGGAGTCCTATTCA+TGG - chr3_1:2757294-2757313 Msa0344310:CDS 50.0%
ATGGGCGGAGTCCTATTCAT+GGG - chr3_1:2757295-2757314 Msa0344310:CDS 50.0%
TCTACCAGGTCCCCATGAAT+AGG + chr3_1:2757309-2757328 None:intergenic 50.0%
TCATGGGGACCTGGTAGAAT+TGG - chr3_1:2757311-2757330 Msa0344310:CDS 50.0%
CATGGGGACCTGGTAGAATT+GGG - chr3_1:2757312-2757331 Msa0344310:CDS 50.0%
CAGCTTCTCCCAATTCTACC+AGG + chr3_1:2757323-2757342 None:intergenic 50.0%
GGTCAATCTATTGGCGAACC+GGG - chr3_1:2757357-2757376 Msa0344310:CDS 50.0%
! ACTGGTGGAGTATTCACAGG+GGG - chr3_1:2757408-2757427 Msa0344310:CDS 50.0%
!! AGTATTCACAGGGGGTACTG+CGG - chr3_1:2757416-2757435 Msa0344310:CDS 50.0%
AAGAAGTCGAGTAGGCGGAT+TGG - chr3_1:2758479-2758498 Msa0344310:CDS 50.0%
TGTGTCGGAAATTCCCCGAA+TGG + chr3_1:2758845-2758864 None:intergenic 50.0%
TTCGGGGAATTTCCGACACA+AGG - chr3_1:2758845-2758864 Msa0344310:intron 50.0%
!! CTTGACGGGCTATCCCTAAA+GGG + chr3_1:2759316-2759335 None:intergenic 50.0%
!! ACTTGACGGGCTATCCCTAA+AGG + chr3_1:2759317-2759336 None:intergenic 50.0%
TTAGGGATAGCCCGTCAAGT+TGG - chr3_1:2759317-2759336 Msa0344310:intron 50.0%
AACCCATATTTGGCGACTCC+AGG - chr3_1:2759692-2759711 Msa0344310:intron 50.0%
CTCCTGGAGTCGCCAAATAT+GGG + chr3_1:2759697-2759716 None:intergenic 50.0%
ACTCCAGGAGCAACCATTCA+TGG - chr3_1:2759707-2759726 Msa0344310:intron 50.0%
GCACCAATCAAGAATCCCCA+AGG + chr3_1:2759929-2759948 None:intergenic 50.0%
TTAGCAAAAGCCGCTCTTCG+GGG - chr3_1:2760268-2760287 Msa0344310:intron 50.0%
ATCAATACGACCCCGAAGAG+CGG + chr3_1:2760281-2760300 None:intergenic 50.0%
! CTCTTCGGGGTCGTATTGAT+TGG - chr3_1:2760281-2760300 Msa0344310:intron 50.0%
TTAGGGGGAATGATACCCGT+TGG - chr3_1:2760331-2760350 Msa0344310:intron 50.0%
GGAATGATACCCGTTGGTAC+CGG - chr3_1:2760337-2760356 Msa0344310:intron 50.0%
! AGCAGCCGATTCAGTAACAC+GGG - chr3_1:2760984-2761003 Msa0344310:CDS 50.0%
! TGCAGCCCGTGTTACTGAAT+CGG + chr3_1:2760992-2761011 None:intergenic 50.0%
CCGGACGTTGGAATAGTTTG+CGG + chr3_1:2761859-2761878 None:intergenic 50.0%
CCGCAAACTATTCCAACGTC+CGG - chr3_1:2761856-2761875 Msa0344310:intron 50.0%
GGTGCAGCTAATTCTCCATG+AGG + chr3_1:2762045-2762064 None:intergenic 50.0%
CTGCTTCTGTTATCGCTGCT+GGG - chr3_1:2763524-2763543 Msa0344310:CDS 50.0%
TTCTGTTATCGCTGCTGGGT+TGG - chr3_1:2763528-2763547 Msa0344310:CDS 50.0%
TCCAATAGAAGCAAGCCCGA+CGG + chr3_1:2763554-2763573 None:intergenic 50.0%
GCTTCTATTGGACCTGGAGT+TGG - chr3_1:2763562-2763581 Msa0344310:CDS 50.0%
! ATTGGACCTGGAGTTGGTCA+AGG - chr3_1:2763568-2763587 Msa0344310:CDS 50.0%
TTGGTCAAGGTACAGCTGCA+GGG - chr3_1:2763581-2763600 Msa0344310:CDS 50.0%
GAATCCGCGGACAACCAATG+AGG - chr3_1:2755172-2755191 Msa0344310:CDS 55.0%
CCTCTTGTCTCCGGCTATTG+GGG - chr3_1:2755710-2755729 Msa0344310:intron 55.0%
ATTCGCCACCGGAGCCAAAA+AGG + chr3_1:2755965-2755984 None:intergenic 55.0%
TCGAACCGAATCCCACTGAG+TGG - chr3_1:2756353-2756372 Msa0344310:intron 55.0%
TCTTGCTACGGAGCCCGTAA+AGG - chr3_1:2756931-2756950 Msa0344310:CDS 55.0%
CTTGCTACGGAGCCCGTAAA+GGG - chr3_1:2756932-2756951 Msa0344310:CDS 55.0%
TTGCTACGGAGCCCGTAAAG+GGG - chr3_1:2756933-2756952 Msa0344310:CDS 55.0%
CAGATTGCGGTACGATTCGC+GGG - chr3_1:2757043-2757062 Msa0344310:CDS 55.0%
TGGGCGGAGTCCTATTCATG+GGG - chr3_1:2757296-2757315 Msa0344310:CDS 55.0%
GAGTCCTATTCATGGGGACC+TGG - chr3_1:2757302-2757321 Msa0344310:CDS 55.0%
CACCCTACACGTACACGTCA+TGG - chr3_1:2757492-2757511 Msa0344310:intron 55.0%
AGTGATTGCTGAGATCCGCG+CGG - chr3_1:2757644-2757663 Msa0344310:intron 55.0%
GCTCCTGGAGTCGCCAAATA+TGG + chr3_1:2759698-2759717 None:intergenic 55.0%
TGGCCATGAATGGTTGCTCC+TGG + chr3_1:2759713-2759732 None:intergenic 55.0%
GGTCCGTGGGTTCCGTTTAT+TGG - chr3_1:2761949-2761968 Msa0344310:intron 55.0%
GCTGCTTCTGTTATCGCTGC+TGG - chr3_1:2763523-2763542 Msa0344310:CDS 55.0%
! GGGCTTGCTTCTATTGGACC+TGG - chr3_1:2763556-2763575 Msa0344310:CDS 55.0%
GCTGTACCTTGACCAACTCC+AGG + chr3_1:2763577-2763596 None:intergenic 55.0%
GTTGGTCAAGGTACAGCTGC+AGG - chr3_1:2763580-2763599 Msa0344310:CDS 55.0%
CTGCAGGGCAAGCTGTAGAA+GGG - chr3_1:2763596-2763615 Msa0344310:CDS 55.0%
AGAAGGGATTGCGCGACAAC+CGG - chr3_1:2763612-2763631 Msa0344310:CDS 55.0%
! CGTCCCTCATTGGTTGTCCG+CGG + chr3_1:2755179-2755198 None:intergenic 60.0%
CGCGGACAACCAATGAGGGA+CGG - chr3_1:2755177-2755196 Msa0344310:CDS 60.0%
CCCCAATAGCCGGAGACAAG+AGG + chr3_1:2755713-2755732 None:intergenic 60.0%
TATGTGCGAGCCCCCTCGAA+TGG - chr3_1:2757441-2757460 Msa0344310:CDS 60.0%
GTGATTGCTGAGATCCGCGC+GGG - chr3_1:2757645-2757664 Msa0344310:intron 60.0%
AGAACGAACTGGGCGTGCCT+TGG - chr3_1:2760141-2760160 Msa0344310:intron 60.0%
! GGTCAGGGGCTCTTTTGCCT+TGG - chr3_1:2762004-2762023 Msa0344310:intron 60.0%
! GCCGTCGGGCTTGCTTCTAT+TGG - chr3_1:2763550-2763569 Msa0344310:CDS 60.0%
GCTGCAGGGCAAGCTGTAGA+AGG - chr3_1:2763595-2763614 Msa0344310:CDS 60.0%
CGGAGCCCGTAAAGGGGTTG+TGG - chr3_1:2756939-2756958 Msa0344310:CDS 65.0%
!! ATCGCTGCTGGGTTGGCCGT+CGG - chr3_1:2763535-2763554 Msa0344310:CDS 65.0%
TGCGCGACAACCGGAAGCAG+AGG - chr3_1:2763621-2763640 Msa0344310:CDS 65.0%
!! TCGCTGCTGGGTTGGCCGTC+GGG - chr3_1:2763536-2763555 Msa0344310:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 2754517 2763750 2754517 ID=Msa0344310;Name=Msa0344310
chr3_1 mRNA 2754517 2763750 2754517 ID=Msa0344310-mRNA-1;Parent=Msa0344310;Name=Msa0344310-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0|0.87|1|1|8|0|1545
chr3_1 exon 2762466 2763750 2762466 ID=Msa0344310-mRNA-1:exon:873;Parent=Msa0344310-mRNA-1
chr3_1 exon 2760430 2761869 2760430 ID=Msa0344310-mRNA-1:exon:872;Parent=Msa0344310-mRNA-1
chr3_1 exon 2757915 2758661 2757915 ID=Msa0344310-mRNA-1:exon:871;Parent=Msa0344310-mRNA-1
chr3_1 exon 2756844 2757485 2756844 ID=Msa0344310-mRNA-1:exon:870;Parent=Msa0344310-mRNA-1
chr3_1 exon 2756138 2756257 2756138 ID=Msa0344310-mRNA-1:exon:869;Parent=Msa0344310-mRNA-1
chr3_1 exon 2755875 2755970 2755875 ID=Msa0344310-mRNA-1:exon:868;Parent=Msa0344310-mRNA-1
chr3_1 exon 2755168 2755217 2755168 ID=Msa0344310-mRNA-1:exon:867;Parent=Msa0344310-mRNA-1
chr3_1 exon 2754517 2754774 2754517 ID=Msa0344310-mRNA-1:exon:866;Parent=Msa0344310-mRNA-1
chr3_1 CDS 2762466 2763750 2762466 ID=Msa0344310-mRNA-1:cds;Parent=Msa0344310-mRNA-1
chr3_1 CDS 2760430 2761869 2760430 ID=Msa0344310-mRNA-1:cds;Parent=Msa0344310-mRNA-1
chr3_1 CDS 2757915 2758661 2757915 ID=Msa0344310-mRNA-1:cds;Parent=Msa0344310-mRNA-1
chr3_1 CDS 2756844 2757485 2756844 ID=Msa0344310-mRNA-1:cds;Parent=Msa0344310-mRNA-1
chr3_1 CDS 2756138 2756257 2756138 ID=Msa0344310-mRNA-1:cds;Parent=Msa0344310-mRNA-1
chr3_1 CDS 2755875 2755970 2755875 ID=Msa0344310-mRNA-1:cds;Parent=Msa0344310-mRNA-1
chr3_1 CDS 2755168 2755217 2755168 ID=Msa0344310-mRNA-1:cds;Parent=Msa0344310-mRNA-1
chr3_1 CDS 2754517 2754774 2754517 ID=Msa0344310-mRNA-1:cds;Parent=Msa0344310-mRNA-1
Gene Sequence

>Msa0344310

ATGAGAGGAAACCCTCACGTCCGATTTTCAAAGGGGGAGATCCATCTTATTGGATCCTATCCAAATTTTTCGTTTGCTAGGCCCGTAGTTAAAAAACCTACTTTCTTACGATTACGAGGTTCATTCGAATATGAAATCCAATCTTGGAAATACAGTATCCCACTCTTTTTTGCTACTCAAGGTTTCGATACATTTCGAAATAGAGAAATTTCTAGTGGAGCAGGTGCTATACGAGAACAATTAGTTGATCTGGATTTAAGAATTATTATGGATTCTTCGTTGGTAGAATGGAAAGAATTAGGAGAAGAGGGATCCACTGACAATGAAAATGAATGGGAAGATCGAAAAGTAGGAAGAAGAAAGAATTTTTTGGTTCGACGCATGGAATTAGCTAAGCACTTTATCCGAACAAATATAGAACCAGAATGGATGGTTTTATGTCTCTTACCAGTTCTTCCTCCCGAATTGAGACCGATTATTCAAATAGATGGAGGGAAACTAATGAGTTCGGATATTAATGAACTCTATAGAAGAGTTATCTATCGGAACAATACTCTTATTGACCTATTAACAACAAGTAGATCTACACCAGGGGAATTAGTAATGTGTCAAGAAAAATTGGTACAAGAAGCCGTGGATACACTCCTTGATAATGGAATCCGCGGACAACCAATGAGGGACGGTCATAATAAAGTTTACAAATCGTTTTCAGATATAATTGAGGGCAAAGAGGGAAGATTTCGAGAGACTCTGCTTGGAAAACGAGTTGATTATTCGGGGCGTTCTGTTATTGTCGTAGGTCCATCACTTTCATTACATCGATGTGGATTGCCCCGCGAAATAGCAATAGAGCTATTTCAGACATTTCTAATTCGTGGTTTAATTCGAAAACATTTTGCTTCGAACATAGGAGTTGCTAAGAGTAAAATACGGGAAAAAGAACCGATTGTATGGGAAATACTTCAAGAAGTTATGCGGGGGCATCCAGTATTGCTGAATAGAGCGCCTACTTTGCATAGATTGGGCATACAGGCATTTCAACCTATTTTAGTAGAAGGACGTGCTATTTGTTTACATCCATTAGTGTGTAAGGGATTCAATGCAGACTTTGATGGGGATCAAATGGCTGTTCATGTGCCTTTATCTTTGGAGGCTCAAGCAGAAGCTCGTTTACTTATGTTTTCTCATACAAACCTCTTGTCTCCGGCTATTGGGGATCCCATTTCCGTACCAACTCAAGATATGCTTATAGGCCTTTATGTATTAACTAGCGGAAATCGTCGAGAACGGGCCAATCTAGTCTTTCACAATAACGTGATAGGTGGAACTGCCATTAAACGACTTATTAGCAGATTAATAGACCATTTCGGAATGGCATATACATCACACATCCTGGATCAAGTAAAGACTCTAGGGTTCCGTCAAGCTACTGCTACATCTATTTCATTAGGAATTGATGATCTTTTAACAATACCTTCTAAAGGATGGCTAGTCCAAGATGCTGAACAACAAAGTTCTATTTTGGAAAAACATAATCAGTATGGGAATGTACATGCGGTAGAAAAATTACGCCAATCCATTGAAATATGGTATGCTACAAGCGAATATTTGCGACAAGAAATGAATCCTAATTTTAGGATGACTGACCCCTTTAATCCAGTCCATATAATGTCTTTTTCAGGAGCTAGAGGAAATGCATCTCAAGTGCACCAATTAGTCGGAATGAGAGGATTAATGTCAGATCCACAAGGACAAATGATTGATTTACCCATTCAAAGCAATTTACGAGAAGGACTGTCTTTAACAGAATATATAATTTCTTGCTACGGAGCCCGTAAAGGGGTTGTGGATACTGCTGTACGAACATCAGATGCTGGATATCTTACACGTCGACTTGTTGAAGTGGTTCAACACATTGTTGTACGTCGAACAGATTGCGGTACGATTCGCGGGATTTCTGTAAATACCCGAAATGGAATGATACCAGAAAGAATTTTGATACAAACATTAATTGGTCGTGTAGTAGCAGACGATATATATATCGGTTCACGGTGCATTGTCGTTAGAAATCAAGATATTGGAATTGGACTTATCAATCGATTCATAACTTTTCAAACACAACCAATATTTATTCGAACCCCCTTTACCTGTAGGAATACGTCTTGGATCTGCCGATTGTGTTATGGGCGGAGTCCTATTCATGGGGACCTGGTAGAATTGGGAGAAGCTGTAGGTATTATTGCTGGTCAATCTATTGGCGAACCGGGAACTCAACTAACATTAAGAACTTTTCATACTGGTGGAGTATTCACAGGGGGTACTGCGGAATATGTGCGAGCCCCCTCGAATGGAAAAATAAAATTTAATGAAGATTTAGTTCACCCTACACGTACACGTCATGGATATCCTGCTTTTATATGTAATATAGACTTGTATGTAACTATTGAAAGTGACGATATTATACATAACGTGATTATTCCACCAAAAAGTTTTCTATTAGTTCAAAATGATCAATATGTAAAATCAGAACAAGTGATTGCTGAGATCCGCGCGGGAACATATACTTTTAATTTGAAAGAAAGGGTTCGAAAACATATTTATTCTGACTCAGAAGGCGAAATGCATTGGAGTACCGATGTGTACCATGCATCCGAATTTTTGTATAGTAATGTACATATCTTACCAAAAACAGTCATTTATGGATCTTATCAGGAAAGTCGTGCAGCTAAAATGAAAAATGGACCACATCTAAAACTAAAATCGGGTCAAGTTATAACTGTTCAAATGGATTCTGTAATAATAAGATCGGCTAACCCATATTTGGCGACTCCAGGAGCAACCATTCATGGCCATTATGGAGAAATCCTTTATCAAGGAGATATTTTAGTTACATTCATATATGAAAAATCGAGATCCGGTGATATAACACAAGGTCTTCCAAAAGTGGAACAGATATTAGAAATACGTTCGATTGATTCAATATCGATGAATCTCGAAAAAAGAATTGATGCTTGGAATGAGTGTATAACAAGAATTCTCGGCATTCCTTGGGGATTCTTGATTGGTGCTGAGCTAACTATAGCGCAAAGTCGTATTTCTTTGGTTAATAAAATCCAAAAGGTTTATCGATCCCAGGGAGTACACATCCATAATAGACATATCGAAATTATTGTGCGTCAAATAACATCCAAAGTCTTGGTTTCAGAAGATGGAATGTCTAATGTATTTTTACCCGGTGAATTAATTGGATTATTGCGAGCAGAACGAACTGGGCGTGCCTTGGAAGAAGCAATTTGTTACCGAGCTTTATTATTGGGAATAACAAAAACATCTCTGAATACTCAAAGTTTCATATCCGAAGCGAGTTTTCAAGAAACTGCTAGAGTTTTAGCAAAAGCCGCTCTTCGGGGTCGTATTGATTGGTTGAAAGGTCTTAAAGAGAATGTTGTTTTAGGGGGAATGATACCCGTTGAGATGATGGAAGCTGGAGTTCATTTTGGCCATGATACTCGGAAATGGAATCCTCGAATGGCACCTTTTATATCGGCAAAGCGTAAAGGTATTCATATTACAAATCTTACTCGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTGGTTTTTGATGCAGCAAGCATGGGAAAACAATTCTTAATTGTTGGTACAAAAAAAAAAGCAGCCGATTCAGTAACACGGGCTGCAATAAGAGCTCGATGTCATTATGTTAATAAAAAATGGCTCGGAGGTATGTTAACGAATTGGTATACTACAGAAACGAGACTTCGTAAGTTCAGGGACTTGAGAACGGAGCAAAAGACAGGGAAACTGAACTCTCTTCCAAAAAGAGATGCCGCTATGTTCAAGAGACAATTATCTCATTTGGAAACATATCTGGGTGGCATAAAATATATGACGGGGTTACCCGATATTGTAATAATCGTTGATCAGCAAGAAGAATATACGGCTCTTCGAGAATGTATCACTTTGGGAATTCCAACGATTTGTTTAATCGATACAAATTGTGACCCAGATCTAGCAGATATTTCGATTCCAGCTAATGATGATGCTATAGCTTCAATCCGATTAATTCTTAACAAATTAGTTTTTGCAATTTGGGCTCTTTTGCCTTGGAAAATTATAAAGTTACCTCATGGAGAATTAGCTGCACCCACAAATGATATAAATACTACTGTTGCATTAGCTTTACTTACGTCAGTAGCCTATTTCTATGCGGTACCTTTAGTAGTTCCTATACCTGTTATGTTTCTGGGATTATTTACAAGCGGTATTCAAGCTCTTATTTTTGCTACCTTAGCTGCGGCTTATATAGGGGTTTCCAAGAATGATTCTCGAATCCTATTGAATCCTATTGAATCTAAGGAGAAACTTATCATGGATCCACTGATTTCTGCTGCTTCTGTTATCGCTGCTGGGTTGGCCGTCGGGCTTGCTTCTATTGGACCTGGAGTTGGTCAAGGTACAGCTGCAGGGCAAGCTGTAGAAGGGATTGCGCGACAACCGGAAGCAGAGGACAAAATAAGGGGTACTTTATTACTTAGTCTGGCTTTTATGGAAGCTTTAACTATTTATGGGCTGGTTGTAGCATTAGCACTTTTATTTGCCAATCCTTTTGTTTAA
Protein sequence

>Msa0344310

MRGNPHVRFSKGEIHLIGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIREQLVDLDLRIIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWEILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRERANLVFHNNVIGGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFRQATATSISLGIDDLLTIPSKGWLVQDAEQQSSILEKHNQYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVNTRNGMIPERILIQTLIGRVVADDIYIGSRCIVVRNQDIGIGLINRFITFQTQPIFIRTPFTCRNTSWICRLCYGRSPIHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEYVRAPSNGKIKFNEDLVHPTRTRHGYPAFICNIDLYVTIESDDIIHNVIIPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVRKHIYSDSEGEMHWSTDVYHASEFLYSNVHILPKTVIYGSYQESRAAKMKNGPHLKLKSGQVITVQMDSVIIRSANPYLATPGATIHGHYGEILYQGDILVTFIYEKSRSGDITQGLPKVEQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVEMMEAGVHFGHDTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAASMGKQFLIVGTKKKAADSVTRAAIRARCHYVNKKWLGGMLTNWYTTETRLRKFRDLRTEQKTGKLNSLPKRDAAMFKRQLSHLETYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAIWALLPWKIIKLPHGELAAPTNDINTTVALALLTSVAYFYAVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGVSKNDSRILLNPIESKEKLIMDPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEDKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV*