Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622410 | XP_039689660.1 | 97.052 | 407 | 12 | 0 | 1 | 407 | 1 | 407 | 0.0 | 820 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622410 | sp|Q42381|HLS1_ARATH | 35.817 | 416 | 232 | 14 | 12 | 407 | 3 | 403 | 7.12e-68 | 223 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622410 | A0A396IJ64 | 97.052 | 407 | 12 | 0 | 1 | 407 | 1 | 407 | 0.0 | 820 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0622410 | TR | GNAT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036430 | Msa0622410 | 0.823905 | 1.076853e-53 | -8.615850e-47 |
| Msa0050040 | Msa0622410 | 0.803577 | 3.261914e-49 | -8.615850e-47 |
| Msa0102990 | Msa0622410 | 0.804569 | 2.028256e-49 | -8.615850e-47 |
| Msa0106790 | Msa0622410 | 0.805709 | 1.171288e-49 | -8.615850e-47 |
| Msa0619980 | Msa0622410 | 0.801503 | 8.733238e-49 | -8.615850e-47 |
| Msa0622410 | Msa0631120 | 0.800971 | 1.121856e-48 | -8.615850e-47 |
| Msa0622410 | Msa0663680 | 0.808574 | 2.897134e-50 | -8.615850e-47 |
| Msa0622410 | Msa0685330 | 0.803016 | 4.263236e-49 | -8.615850e-47 |
| Msa0622410 | Msa0691160 | 0.803892 | 2.805797e-49 | -8.615850e-47 |
| Msa0622410 | Msa0706370 | 0.805829 | 1.104918e-49 | -8.615850e-47 |
| Msa0622410 | Msa0741900 | 0.812596 | 3.914716e-51 | -8.615850e-47 |
| Msa0622410 | Msa0810020 | 0.828492 | 8.724977e-55 | -8.615850e-47 |
| Msa0622410 | Msa0850500 | 0.802607 | 5.177045e-49 | -8.615850e-47 |
| Msa0622410 | Msa0872310 | 0.803925 | 2.762695e-49 | -8.615850e-47 |
| Msa0622410 | Msa0885060 | 0.825805 | 3.836718e-54 | -8.615850e-47 |
| Msa0622410 | Msa0905550 | 0.814138 | 1.794820e-51 | -8.615850e-47 |
| Msa0622410 | Msa1033560 | 0.843349 | 1.480343e-58 | -8.615850e-47 |
| Msa0622410 | Msa1041530 | 0.800900 | 1.160061e-48 | -8.615850e-47 |
| Msa0622410 | Msa1042670 | 0.810318 | 1.223492e-50 | -8.615850e-47 |
| Msa0622410 | Msa1073340 | 0.826643 | 2.423334e-54 | -8.615850e-47 |
| Msa0622410 | Msa1073350 | 0.824182 | 9.271053e-54 | -8.615850e-47 |
| Msa0622410 | Msa1081570 | 0.801356 | 9.359192e-49 | -8.615850e-47 |
| Msa0622410 | Msa1113850 | 0.835369 | 1.747168e-56 | -8.615850e-47 |
| Msa0622410 | Msa1127140 | 0.804384 | 2.216845e-49 | -8.615850e-47 |
| Msa0622410 | Msa1145020 | 0.819858 | 9.312031e-53 | -8.615850e-47 |
| Msa0622410 | Msa1160400 | 0.825794 | 3.859874e-54 | -8.615850e-47 |
| Msa0622410 | Msa1169990 | 0.810588 | 1.069845e-50 | -8.615850e-47 |
| Msa0622410 | Msa1218710 | 0.816723 | 4.773860e-52 | -8.615850e-47 |
| Msa0622410 | Msa1379990 | 0.803535 | 3.327761e-49 | -8.615850e-47 |
| Msa0622410 | Msa1419050 | 0.924513 | 6.372933e-90 | -8.615850e-47 |
| Msa0622410 | Msa1420060 | 0.826415 | 2.747646e-54 | -8.615850e-47 |
| Msa0622410 | Msa1421550 | 0.806656 | 7.400380e-50 | -8.615850e-47 |
| Msa0130570 | Msa0622410 | 0.805036 | 1.620133e-49 | -8.615850e-47 |
| Msa0153420 | Msa0622410 | 0.811433 | 7.017667e-51 | -8.615850e-47 |
| Msa0176470 | Msa0622410 | 0.821168 | 4.659365e-53 | -8.615850e-47 |
| Msa0191040 | Msa0622410 | 0.811687 | 6.181865e-51 | -8.615850e-47 |
| Msa0219190 | Msa0622410 | 0.809574 | 1.768960e-50 | -8.615850e-47 |
| Msa0233340 | Msa0622410 | 0.811063 | 8.442794e-51 | -8.615850e-47 |
| Msa0236110 | Msa0622410 | 0.800331 | 1.515593e-48 | -8.615850e-47 |
| Msa0382010 | Msa0622410 | 0.802446 | 5.589146e-49 | -8.615850e-47 |
| Msa0413930 | Msa0622410 | 0.808699 | 2.724073e-50 | -8.615850e-47 |
| Msa0418200 | Msa0622410 | 0.804513 | 2.083646e-49 | -8.615850e-47 |
| Msa0436500 | Msa0622410 | 0.815395 | 9.448310e-52 | -8.615850e-47 |
| Msa0464540 | Msa0622410 | 0.808676 | 2.754506e-50 | -8.615850e-47 |
| Msa0476590 | Msa0622410 | 0.808632 | 2.815324e-50 | -8.615850e-47 |
| Msa0298240 | Msa0622410 | 0.808412 | 3.137585e-50 | -8.615850e-47 |
| Msa0311690 | Msa0622410 | 0.814752 | 1.312547e-51 | -8.615850e-47 |
| Msa0326540 | Msa0622410 | 0.802352 | 5.843020e-49 | -8.615850e-47 |
| Msa0520510 | Msa0622410 | 0.841032 | 6.074736e-58 | -8.615850e-47 |
| Msa0534570 | Msa0622410 | 0.803960 | 2.716932e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622410 | MtrunA17_Chr4g0068331 | 97.052 | 407 | 12 | 0 | 1 | 407 | 1 | 407 | 0.0 | 820 |
| Msa0622410 | MtrunA17_Chr3g0105631 | 37.037 | 405 | 219 | 15 | 13 | 406 | 8 | 387 | 1.87e-72 | 232 |
| Msa0622410 | MtrunA17_Chr4g0001411 | 34.390 | 410 | 239 | 11 | 8 | 407 | 20 | 409 | 2.10e-63 | 209 |
| Msa0622410 | MtrunA17_Chr4g0053961 | 33.571 | 420 | 241 | 12 | 11 | 407 | 7 | 411 | 2.01e-62 | 206 |
| Msa0622410 | MtrunA17_Chr5g0401351 | 33.976 | 415 | 242 | 12 | 7 | 406 | 5 | 402 | 2.62e-60 | 201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622410 | AT4G37580.1 | 35.817 | 416 | 232 | 14 | 12 | 407 | 3 | 403 | 7.24e-69 | 223 |
| Msa0622410 | AT2G23060.1 | 33.570 | 423 | 241 | 13 | 11 | 407 | 5 | 413 | 1.31e-65 | 215 |
| Msa0622410 | AT2G30090.1 | 34.390 | 410 | 214 | 19 | 13 | 406 | 15 | 385 | 3.74e-54 | 184 |
| Msa0622410 | AT4G37580.2 | 33.994 | 353 | 204 | 10 | 74 | 407 | 4 | 346 | 5.82e-54 | 182 |
| Msa0622410 | AT5G67430.1 | 33.496 | 409 | 228 | 14 | 11 | 406 | 8 | 385 | 5.74e-53 | 181 |
| Msa0622410 | AT5G67430.2 | 32.492 | 317 | 194 | 9 | 91 | 406 | 23 | 320 | 4.92e-39 | 142 |
| Msa0622410 | AT2G23060.2 | 30.208 | 288 | 188 | 7 | 124 | 407 | 1 | 279 | 1.03e-35 | 132 |
Find 84 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGTGTGCAAACTCCTTC+TGG | 0.261524 | 4_2:-74838724 | Msa0622410:CDS |
| GAGCTTGTTGGAGTTGTTAA+AGG | 0.270934 | 4_2:-74838754 | Msa0622410:CDS |
| GATTAATGGGACTACTAAAA+AGG | 0.272190 | 4_2:-74839041 | Msa0622410:CDS |
| AGGGTTGTTATAACTGAGTT+AGG | 0.299823 | 4_2:-74837695 | Msa0622410:CDS |
| GTGACCCTTTATCTAGGATT+AGG | 0.304028 | 4_2:-74838985 | Msa0622410:CDS |
| AGTTGCATTTGTTGGTGAAT+AGG | 0.308058 | 4_2:+74838278 | None:intergenic |
| TTTCAAGATTCTTGTGTAGA+AGG | 0.309351 | 4_2:+74838141 | None:intergenic |
| AGAAACTGTACTGAGATTAA+TGG | 0.318075 | 4_2:-74839055 | Msa0622410:CDS |
| TAGAACCTAATCCTAGATAA+AGG | 0.318214 | 4_2:+74838980 | None:intergenic |
| ATCTAATGGATACAACTCTT+TGG | 0.333407 | 4_2:+74838117 | None:intergenic |
| GTTGGTGAATAGGTTATTAG+AGG | 0.345184 | 4_2:+74838288 | None:intergenic |
| TTCTTAGAAATGTGGTTTGT+TGG | 0.348075 | 4_2:+74838205 | None:intergenic |
| ATGTGTAACAACAGTACATT+TGG | 0.356097 | 4_2:-74837824 | Msa0622410:CDS |
| GAAACTGTACTGAGATTAAT+GGG | 0.378728 | 4_2:-74839054 | Msa0622410:CDS |
| AGAATAATGTCCATATCTAA+TGG | 0.380464 | 4_2:+74838103 | None:intergenic |
| GCGGGCTAATGGAATCAATA+TGG | 0.381668 | 4_2:-74837757 | Msa0622410:CDS |
| AGAGAATCTTGGCGGGCTAA+TGG | 0.382594 | 4_2:-74837768 | Msa0622410:CDS |
| TCTTAGAAATGTGGTTTGTT+GGG | 0.383397 | 4_2:+74838206 | None:intergenic |
| GTTATAACTGAGTTAGGGTT+TGG | 0.401121 | 4_2:-74837689 | Msa0622410:CDS |
| TTCAAGATGGGTTGTATACT+AGG | 0.416953 | 4_2:-74838694 | Msa0622410:CDS |
| TGATGATGAAAATGATGAAT+TGG | 0.425086 | 4_2:-74837579 | Msa0622410:CDS |
| TGGAGGTTTACATCAAGATT+AGG | 0.428439 | 4_2:-74837737 | Msa0622410:CDS |
| CATGATAATTACCTGTGTAT+AGG | 0.429059 | 4_2:+74838658 | None:intergenic |
| TTCTGGATCACTCTTCAAGA+TGG | 0.429973 | 4_2:-74838707 | Msa0622410:CDS |
| ATTGAAATAGTTGCATTTGT+TGG | 0.433692 | 4_2:+74838270 | None:intergenic |
| GTTGAAAACAAGGAGCTTGT+TGG | 0.434978 | 4_2:-74838766 | Msa0622410:CDS |
| AGAGTTGTATCCATTAGATA+TGG | 0.437070 | 4_2:-74838113 | Msa0622410:CDS |
| AAATTTACTGTGCAGGAGAA+AGG | 0.442722 | 4_2:-74838404 | Msa0622410:intron |
| GTAATGGTGACCCTTTATCT+AGG | 0.452354 | 4_2:-74838991 | Msa0622410:CDS |
| GGAATGTGTTTGTTGATCCT+AGG | 0.455878 | 4_2:-74837532 | Msa0622410:CDS |
| CAAAATTATTTCAACCACTT+AGG | 0.457975 | 4_2:-74837913 | Msa0622410:CDS |
| GGGTTGTTATAACTGAGTTA+GGG | 0.463044 | 4_2:-74837694 | Msa0622410:CDS |
| CTATCCCCTTCGTGTTATGT+TGG | 0.463391 | 4_2:-74838960 | Msa0622410:intron |
| TAGCATCCACTCTTCAATTG+AGG | 0.471060 | 4_2:+74838360 | None:intergenic |
| CATGGAGAGGGAGAGAATCT+TGG | 0.478715 | 4_2:-74837779 | Msa0622410:CDS |
| TGTGTATAGGAGAGACTCTA+AGG | 0.479289 | 4_2:+74838671 | None:intergenic |
| AATAACTAACCCAAGTTCCT+AGG | 0.480250 | 4_2:+74838065 | None:intergenic |
| TCTGGATCACTCTTCAAGAT+GGG | 0.484366 | 4_2:-74838706 | Msa0622410:CDS |
| GATAGAGACGTTAAAGTGGT+GGG | 0.487062 | 4_2:-74839088 | Msa0622410:CDS |
| GAATGTGTTTGTTGATCCTA+GGG | 0.487462 | 4_2:-74837531 | Msa0622410:CDS |
| AGAACCTAATCCTAGATAAA+GGG | 0.491131 | 4_2:+74838981 | None:intergenic |
| CACGACATAGAATCAATTTG+AGG | 0.498622 | 4_2:+74837644 | None:intergenic |
| AATTTACTGTGCAGGAGAAA+GGG | 0.506218 | 4_2:-74838403 | Msa0622410:intron |
| TGTGTAACAACAGTACATTT+GGG | 0.506653 | 4_2:-74837823 | Msa0622410:CDS |
| AACAAACCACATTTCTAAGA+AGG | 0.512894 | 4_2:-74838203 | Msa0622410:CDS |
| TTGGGAAACTAGTTGGTGGA+TGG | 0.520506 | 4_2:+74838224 | None:intergenic |
| TTCACCAACATGATGAGTAA+TGG | 0.521767 | 4_2:-74839007 | Msa0622410:CDS |
| CTTTATGGACTTCATGGAGA+GGG | 0.530822 | 4_2:-74837791 | Msa0622410:CDS |
| TGGTTTGTTGGGAAACTAGT+TGG | 0.533846 | 4_2:+74838217 | None:intergenic |
| AGCTGAGATGGTTGAAAACA+AGG | 0.541254 | 4_2:-74838776 | Msa0622410:CDS |
| AAAGTACAACAAGCTCATCA+TGG | 0.542735 | 4_2:-74837994 | Msa0622410:CDS |
| AAAACTCAGCCTAGGAACTT+GGG | 0.550630 | 4_2:-74838074 | Msa0622410:CDS |
| TTTGTTGGGAAACTAGTTGG+TGG | 0.550774 | 4_2:+74838220 | None:intergenic |
| TGACATCCTTCTTAGAAATG+TGG | 0.553319 | 4_2:+74838197 | None:intergenic |
| TGATGAAAATGATGAATTGG+TGG | 0.563601 | 4_2:-74837576 | Msa0622410:CDS |
| TGAGGAACATGGTTTACAAG+TGG | 0.564375 | 4_2:+74837662 | None:intergenic |
| ATAGAGACGTTAAAGTGGTG+GGG | 0.567023 | 4_2:-74839087 | Msa0622410:CDS |
| GGAGAGGGAGAGAATCTTGG+CGG | 0.572469 | 4_2:-74837776 | Msa0622410:CDS |
| GAAGAGTGGATGCTAAGAAA+TGG | 0.583171 | 4_2:-74838352 | Msa0622410:CDS |
| TGAAGATAGAGACGTTAAAG+TGG | 0.583839 | 4_2:-74839092 | Msa0622410:CDS |
| TAGAATCAATTTGAGGAACA+TGG | 0.588050 | 4_2:+74837651 | None:intergenic |
| AGATAGAGACGTTAAAGTGG+TGG | 0.592949 | 4_2:-74839089 | Msa0622410:CDS |
| CTGTGCAGGAGAAAGGGAGT+TGG | 0.597746 | 4_2:-74838397 | Msa0622410:intron |
| GTCGCATGAAGAAACCTAAG+TGG | 0.602408 | 4_2:+74837899 | None:intergenic |
| TGCGACATTAAATCATGCAA+AGG | 0.605817 | 4_2:-74837882 | Msa0622410:CDS |
| TGGCCTGCAGGTAGCTGAGA+TGG | 0.614618 | 4_2:-74838788 | Msa0622410:intron |
| GAGAGGGAGAGAATCTTGGC+GGG | 0.615284 | 4_2:-74837775 | Msa0622410:CDS |
| GAGGTGATGAAGAGACAACT+CGG | 0.616820 | 4_2:-74837554 | Msa0622410:CDS |
| ACACACCAACATAACACGAA+GGG | 0.618929 | 4_2:+74838955 | None:intergenic |
| GTCACCATTACTCATCATGT+TGG | 0.630070 | 4_2:+74839003 | None:intergenic |
| TTGTAACCTCAATTGAAGAG+TGG | 0.632770 | 4_2:-74838366 | Msa0622410:CDS |
| CACATACAGTATAGAGAGCG+AGG | 0.638269 | 4_2:-74839134 | Msa0622410:CDS |
| TGTCGTGTATTGATGATATG+TGG | 0.645905 | 4_2:-74837628 | Msa0622410:CDS |
| AGGTGATGAAGAGACAACTC+GGG | 0.647405 | 4_2:-74837553 | Msa0622410:CDS |
| TCTTTATGGACTTCATGGAG+AGG | 0.647924 | 4_2:-74837792 | Msa0622410:CDS |
| TGAAAATGATGAATTGGTGG+AGG | 0.648658 | 4_2:-74837573 | Msa0622410:CDS |
| TTAGAGTCTCTCCTATACAC+AGG | 0.650718 | 4_2:-74838669 | Msa0622410:intron |
| GAGACGTTAAAGTGGTGGGG+AGG | 0.666370 | 4_2:-74839084 | Msa0622410:CDS |
| CACACCAACATAACACGAAG+GGG | 0.668902 | 4_2:+74838956 | None:intergenic |
| TACACACCAACATAACACGA+AGG | 0.672948 | 4_2:+74838954 | None:intergenic |
| GGCTAATGGAATCAATATGG+AGG | 0.674786 | 4_2:-74837754 | Msa0622410:CDS |
| ATGGAGATATATGATGAGTG+AGG | 0.681980 | 4_2:+74838243 | None:intergenic |
| GAGTCAAACATTCTCAAACA+AGG | 0.685595 | 4_2:+74837848 | None:intergenic |
| ATCTTGAAGAGTGATCCAGA+AGG | 0.751962 | 4_2:+74838709 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTTGTTTTAACTTGA+AGG | + | chr4_2:74838741-74838760 | None:intergenic | 15.0% |
| !!! | ATAATTTTGTTTTAACTTGA+AGG | + | chr4_2:74838741-74838760 | None:intergenic | 15.0% |
| !! | ATATAATATATATACACCTG+CGG | + | chr4_2:74837825-74837844 | None:intergenic | 20.0% |
| !!! | TATATGATGATGATACATAA+TGG | - | chr4_2:74837857-74837876 | Msa0622410:CDS | 20.0% |
| !! | ACAGTAAATTTAATGTAATG+TGG | + | chr4_2:74838252-74838271 | None:intergenic | 20.0% |
| !! | AAGATTAGGAGAAAAATTAA+AGG | - | chr4_2:74838942-74838961 | Msa0622410:intron | 20.0% |
| !! | ATATAATATATATACACCTG+CGG | + | chr4_2:74837825-74837844 | None:intergenic | 20.0% |
| !!! | TATATGATGATGATACATAA+TGG | - | chr4_2:74837857-74837876 | Msa0622410:CDS | 20.0% |
| !! | ACAGTAAATTTAATGTAATG+TGG | + | chr4_2:74838252-74838271 | None:intergenic | 20.0% |
| !! | AAGATTAGGAGAAAAATTAA+AGG | - | chr4_2:74838942-74838961 | Msa0622410:intron | 20.0% |
| ! | ATTAATGGGACTACTAAAAA+GGG | - | chr4_2:74837625-74837644 | Msa0622410:CDS | 25.0% |
| !!! | AAAGAGTATTTGATGAAAAG+AGG | + | chr4_2:74837769-74837788 | None:intergenic | 25.0% |
| ! | TTACATTAAATTTACTGTGC+AGG | - | chr4_2:74838254-74838273 | Msa0622410:CDS | 25.0% |
| ! | ATTGAAATAGTTGCATTTGT+TGG | + | chr4_2:74838398-74838417 | None:intergenic | 25.0% |
| ! | AGAATAATGTCCATATCTAA+TGG | + | chr4_2:74838565-74838584 | None:intergenic | 25.0% |
| ! | CAAAATTATTTCAACCACTT+AGG | - | chr4_2:74838752-74838771 | Msa0622410:CDS | 25.0% |
| !!! | TTTGGGTTTCTTTTTCTTTA+TGG | - | chr4_2:74838859-74838878 | Msa0622410:intron | 25.0% |
| !! | AGAAAAATTAAAGGAGTGTA+GGG | - | chr4_2:74838951-74838970 | Msa0622410:intron | 25.0% |
| !! | TGATGATGAAAATGATGAAT+TGG | - | chr4_2:74839086-74839105 | Msa0622410:CDS | 25.0% |
| ! | ATTAATGGGACTACTAAAAA+GGG | - | chr4_2:74837625-74837644 | Msa0622410:CDS | 25.0% |
| !!! | AAAGAGTATTTGATGAAAAG+AGG | + | chr4_2:74837769-74837788 | None:intergenic | 25.0% |
| ! | TTACATTAAATTTACTGTGC+AGG | - | chr4_2:74838254-74838273 | Msa0622410:CDS | 25.0% |
| ! | ATTGAAATAGTTGCATTTGT+TGG | + | chr4_2:74838398-74838417 | None:intergenic | 25.0% |
| ! | AGAATAATGTCCATATCTAA+TGG | + | chr4_2:74838565-74838584 | None:intergenic | 25.0% |
| ! | CAAAATTATTTCAACCACTT+AGG | - | chr4_2:74838752-74838771 | Msa0622410:CDS | 25.0% |
| !!! | TTTGGGTTTCTTTTTCTTTA+TGG | - | chr4_2:74838859-74838878 | Msa0622410:intron | 25.0% |
| !! | AGAAAAATTAAAGGAGTGTA+GGG | - | chr4_2:74838951-74838970 | Msa0622410:intron | 25.0% |
| !! | TGATGATGAAAATGATGAAT+TGG | - | chr4_2:74839086-74839105 | Msa0622410:CDS | 25.0% |
| AGAAACTGTACTGAGATTAA+TGG | - | chr4_2:74837610-74837629 | Msa0622410:CDS | 30.0% | |
| GAAACTGTACTGAGATTAAT+GGG | - | chr4_2:74837611-74837630 | Msa0622410:CDS | 30.0% | |
| GATTAATGGGACTACTAAAA+AGG | - | chr4_2:74837624-74837643 | Msa0622410:CDS | 30.0% | |
| AGAACCTAATCCTAGATAAA+GGG | + | chr4_2:74837687-74837706 | None:intergenic | 30.0% | |
| TAGAACCTAATCCTAGATAA+AGG | + | chr4_2:74837688-74837707 | None:intergenic | 30.0% | |
| CTCTTTCAAATCTACTTTAC+TGG | - | chr4_2:74837783-74837802 | Msa0622410:CDS | 30.0% | |
| CATGATAATTACCTGTGTAT+AGG | + | chr4_2:74838010-74838029 | None:intergenic | 30.0% | |
| CTATACACAGGTAATTATCA+TGG | - | chr4_2:74838008-74838027 | Msa0622410:CDS | 30.0% | |
| ! | TATTTTGTGACGCTATATAG+AGG | + | chr4_2:74838069-74838088 | None:intergenic | 30.0% |
| !! | GTTATCCCTAACTATTTTAG+TGG | - | chr4_2:74838151-74838170 | Msa0622410:CDS | 30.0% |
| !! | TCTTAGAAATGTGGTTTGTT+GGG | + | chr4_2:74838462-74838481 | None:intergenic | 30.0% |
| ! | TTCTTAGAAATGTGGTTTGT+TGG | + | chr4_2:74838463-74838482 | None:intergenic | 30.0% |
| ! | AACAAACCACATTTCTAAGA+AGG | - | chr4_2:74838462-74838481 | Msa0622410:intron | 30.0% |
| TTTCAAGATTCTTGTGTAGA+AGG | + | chr4_2:74838527-74838546 | None:intergenic | 30.0% | |
| ! | ATCTAATGGATACAACTCTT+TGG | + | chr4_2:74838551-74838570 | None:intergenic | 30.0% |
| AGAGTTGTATCCATTAGATA+TGG | - | chr4_2:74838552-74838571 | Msa0622410:intron | 30.0% | |
| !!! | TGAGCTTGTTGTACTTTTAT+GGG | + | chr4_2:74838668-74838687 | None:intergenic | 30.0% |
| !!! | ATGAGCTTGTTGTACTTTTA+TGG | + | chr4_2:74838669-74838688 | None:intergenic | 30.0% |
| ! | CATGGATCATTTTCAGTTTA+TGG | - | chr4_2:74838689-74838708 | Msa0622410:CDS | 30.0% |
| ATGTGTAACAACAGTACATT+TGG | - | chr4_2:74838841-74838860 | Msa0622410:intron | 30.0% | |
| TGTGTAACAACAGTACATTT+GGG | - | chr4_2:74838842-74838861 | Msa0622410:intron | 30.0% | |
| ! | CTTTTTCTTTATGGACTTCA+TGG | - | chr4_2:74838868-74838887 | Msa0622410:intron | 30.0% |
| ! | GAGAAAAATTAAAGGAGTGT+AGG | - | chr4_2:74838950-74838969 | Msa0622410:intron | 30.0% |
| TAGAATCAATTTGAGGAACA+TGG | + | chr4_2:74839017-74839036 | None:intergenic | 30.0% | |
| TGATGAAAATGATGAATTGG+TGG | - | chr4_2:74839089-74839108 | Msa0622410:CDS | 30.0% | |
| AGAAACTGTACTGAGATTAA+TGG | - | chr4_2:74837610-74837629 | Msa0622410:CDS | 30.0% | |
| GAAACTGTACTGAGATTAAT+GGG | - | chr4_2:74837611-74837630 | Msa0622410:CDS | 30.0% | |
| GATTAATGGGACTACTAAAA+AGG | - | chr4_2:74837624-74837643 | Msa0622410:CDS | 30.0% | |
| AGAACCTAATCCTAGATAAA+GGG | + | chr4_2:74837687-74837706 | None:intergenic | 30.0% | |
| TAGAACCTAATCCTAGATAA+AGG | + | chr4_2:74837688-74837707 | None:intergenic | 30.0% | |
| CTCTTTCAAATCTACTTTAC+TGG | - | chr4_2:74837783-74837802 | Msa0622410:CDS | 30.0% | |
| CATGATAATTACCTGTGTAT+AGG | + | chr4_2:74838010-74838029 | None:intergenic | 30.0% | |
| CTATACACAGGTAATTATCA+TGG | - | chr4_2:74838008-74838027 | Msa0622410:CDS | 30.0% | |
| ! | TATTTTGTGACGCTATATAG+AGG | + | chr4_2:74838069-74838088 | None:intergenic | 30.0% |
| !! | GTTATCCCTAACTATTTTAG+TGG | - | chr4_2:74838151-74838170 | Msa0622410:CDS | 30.0% |
| !! | TCTTAGAAATGTGGTTTGTT+GGG | + | chr4_2:74838462-74838481 | None:intergenic | 30.0% |
| ! | TTCTTAGAAATGTGGTTTGT+TGG | + | chr4_2:74838463-74838482 | None:intergenic | 30.0% |
| ! | AACAAACCACATTTCTAAGA+AGG | - | chr4_2:74838462-74838481 | Msa0622410:intron | 30.0% |
| TTTCAAGATTCTTGTGTAGA+AGG | + | chr4_2:74838527-74838546 | None:intergenic | 30.0% | |
| ! | ATCTAATGGATACAACTCTT+TGG | + | chr4_2:74838551-74838570 | None:intergenic | 30.0% |
| AGAGTTGTATCCATTAGATA+TGG | - | chr4_2:74838552-74838571 | Msa0622410:intron | 30.0% | |
| !!! | TGAGCTTGTTGTACTTTTAT+GGG | + | chr4_2:74838668-74838687 | None:intergenic | 30.0% |
| !!! | ATGAGCTTGTTGTACTTTTA+TGG | + | chr4_2:74838669-74838688 | None:intergenic | 30.0% |
| ! | CATGGATCATTTTCAGTTTA+TGG | - | chr4_2:74838689-74838708 | Msa0622410:CDS | 30.0% |
| ATGTGTAACAACAGTACATT+TGG | - | chr4_2:74838841-74838860 | Msa0622410:intron | 30.0% | |
| TGTGTAACAACAGTACATTT+GGG | - | chr4_2:74838842-74838861 | Msa0622410:intron | 30.0% | |
| ! | CTTTTTCTTTATGGACTTCA+TGG | - | chr4_2:74838868-74838887 | Msa0622410:intron | 30.0% |
| ! | GAGAAAAATTAAAGGAGTGT+AGG | - | chr4_2:74838950-74838969 | Msa0622410:intron | 30.0% |
| TAGAATCAATTTGAGGAACA+TGG | + | chr4_2:74839017-74839036 | None:intergenic | 30.0% | |
| TGATGAAAATGATGAATTGG+TGG | - | chr4_2:74839089-74839108 | Msa0622410:CDS | 30.0% | |
| TGAAGATAGAGACGTTAAAG+TGG | - | chr4_2:74837573-74837592 | Msa0622410:CDS | 35.0% | |
| TTCACCAACATGATGAGTAA+TGG | - | chr4_2:74837658-74837677 | Msa0622410:CDS | 35.0% | |
| TCAAATATATATGTAGCCGC+AGG | - | chr4_2:74837806-74837825 | Msa0622410:CDS | 35.0% | |
| !! | TTCAAGATGGGTTGTATACT+AGG | - | chr4_2:74837971-74837990 | Msa0622410:CDS | 35.0% |
| TGCGACCACTAAAATAGTTA+GGG | + | chr4_2:74838159-74838178 | None:intergenic | 35.0% | |
| CACGACTAATACAATCTGTA+TGG | + | chr4_2:74838197-74838216 | None:intergenic | 35.0% | |
| AAATTTACTGTGCAGGAGAA+AGG | - | chr4_2:74838261-74838280 | Msa0622410:CDS | 35.0% | |
| AATTTACTGTGCAGGAGAAA+GGG | - | chr4_2:74838262-74838281 | Msa0622410:CDS | 35.0% | |
| TTGTAACCTCAATTGAAGAG+TGG | - | chr4_2:74838299-74838318 | Msa0622410:CDS | 35.0% | |
| ! | TGTTATTCTTTTCTGTGGCT+AGG | + | chr4_2:74838354-74838373 | None:intergenic | 35.0% |
| !! | GGCATTGTTATTCTTTTCTG+TGG | + | chr4_2:74838359-74838378 | None:intergenic | 35.0% |
| ! | GTTGGTGAATAGGTTATTAG+AGG | + | chr4_2:74838380-74838399 | None:intergenic | 35.0% |
| ! | AGTTGCATTTGTTGGTGAAT+AGG | + | chr4_2:74838390-74838409 | None:intergenic | 35.0% |
| ATGGAGATATATGATGAGTG+AGG | + | chr4_2:74838425-74838444 | None:intergenic | 35.0% | |
| TGACATCCTTCTTAGAAATG+TGG | + | chr4_2:74838471-74838490 | None:intergenic | 35.0% | |
| AATAACTAACCCAAGTTCCT+AGG | + | chr4_2:74838603-74838622 | None:intergenic | 35.0% | |
| AAAGTACAACAAGCTCATCA+TGG | - | chr4_2:74838671-74838690 | Msa0622410:CDS | 35.0% | |
| TGCGACATTAAATCATGCAA+AGG | - | chr4_2:74838783-74838802 | Msa0622410:intron | 35.0% | |
| GAGTCAAACATTCTCAAACA+AGG | + | chr4_2:74838820-74838839 | None:intergenic | 35.0% | |
| TGGAGGTTTACATCAAGATT+AGG | - | chr4_2:74838928-74838947 | Msa0622410:intron | 35.0% | |
| AGGGTTGTTATAACTGAGTT+AGG | - | chr4_2:74838970-74838989 | Msa0622410:CDS | 35.0% | |
| GGGTTGTTATAACTGAGTTA+GGG | - | chr4_2:74838971-74838990 | Msa0622410:CDS | 35.0% | |
| GTTATAACTGAGTTAGGGTT+TGG | - | chr4_2:74838976-74838995 | Msa0622410:CDS | 35.0% | |
| CACGACATAGAATCAATTTG+AGG | + | chr4_2:74839024-74839043 | None:intergenic | 35.0% | |
| ! | TGTCGTGTATTGATGATATG+TGG | - | chr4_2:74839037-74839056 | Msa0622410:CDS | 35.0% |
| ATGTGGTACACAAAAAGACT+TGG | - | chr4_2:74839054-74839073 | Msa0622410:CDS | 35.0% | |
| TGAAAATGATGAATTGGTGG+AGG | - | chr4_2:74839092-74839111 | Msa0622410:CDS | 35.0% | |
| ! | GAATGTGTTTGTTGATCCTA+GGG | - | chr4_2:74839134-74839153 | Msa0622410:CDS | 35.0% |
| TGAAGATAGAGACGTTAAAG+TGG | - | chr4_2:74837573-74837592 | Msa0622410:CDS | 35.0% | |
| TTCACCAACATGATGAGTAA+TGG | - | chr4_2:74837658-74837677 | Msa0622410:CDS | 35.0% | |
| TCAAATATATATGTAGCCGC+AGG | - | chr4_2:74837806-74837825 | Msa0622410:CDS | 35.0% | |
| !! | TTCAAGATGGGTTGTATACT+AGG | - | chr4_2:74837971-74837990 | Msa0622410:CDS | 35.0% |
| TGCGACCACTAAAATAGTTA+GGG | + | chr4_2:74838159-74838178 | None:intergenic | 35.0% | |
| CACGACTAATACAATCTGTA+TGG | + | chr4_2:74838197-74838216 | None:intergenic | 35.0% | |
| AAATTTACTGTGCAGGAGAA+AGG | - | chr4_2:74838261-74838280 | Msa0622410:CDS | 35.0% | |
| AATTTACTGTGCAGGAGAAA+GGG | - | chr4_2:74838262-74838281 | Msa0622410:CDS | 35.0% | |
| TTGTAACCTCAATTGAAGAG+TGG | - | chr4_2:74838299-74838318 | Msa0622410:CDS | 35.0% | |
| ! | TGTTATTCTTTTCTGTGGCT+AGG | + | chr4_2:74838354-74838373 | None:intergenic | 35.0% |
| !! | GGCATTGTTATTCTTTTCTG+TGG | + | chr4_2:74838359-74838378 | None:intergenic | 35.0% |
| ! | GTTGGTGAATAGGTTATTAG+AGG | + | chr4_2:74838380-74838399 | None:intergenic | 35.0% |
| ! | AGTTGCATTTGTTGGTGAAT+AGG | + | chr4_2:74838390-74838409 | None:intergenic | 35.0% |
| ATGGAGATATATGATGAGTG+AGG | + | chr4_2:74838425-74838444 | None:intergenic | 35.0% | |
| TGACATCCTTCTTAGAAATG+TGG | + | chr4_2:74838471-74838490 | None:intergenic | 35.0% | |
| AATAACTAACCCAAGTTCCT+AGG | + | chr4_2:74838603-74838622 | None:intergenic | 35.0% | |
| AAAGTACAACAAGCTCATCA+TGG | - | chr4_2:74838671-74838690 | Msa0622410:CDS | 35.0% | |
| TGCGACATTAAATCATGCAA+AGG | - | chr4_2:74838783-74838802 | Msa0622410:intron | 35.0% | |
| GAGTCAAACATTCTCAAACA+AGG | + | chr4_2:74838820-74838839 | None:intergenic | 35.0% | |
| TGGAGGTTTACATCAAGATT+AGG | - | chr4_2:74838928-74838947 | Msa0622410:intron | 35.0% | |
| AGGGTTGTTATAACTGAGTT+AGG | - | chr4_2:74838970-74838989 | Msa0622410:CDS | 35.0% | |
| GGGTTGTTATAACTGAGTTA+GGG | - | chr4_2:74838971-74838990 | Msa0622410:CDS | 35.0% | |
| GTTATAACTGAGTTAGGGTT+TGG | - | chr4_2:74838976-74838995 | Msa0622410:CDS | 35.0% | |
| CACGACATAGAATCAATTTG+AGG | + | chr4_2:74839024-74839043 | None:intergenic | 35.0% | |
| ! | TGTCGTGTATTGATGATATG+TGG | - | chr4_2:74839037-74839056 | Msa0622410:CDS | 35.0% |
| ATGTGGTACACAAAAAGACT+TGG | - | chr4_2:74839054-74839073 | Msa0622410:CDS | 35.0% | |
| TGAAAATGATGAATTGGTGG+AGG | - | chr4_2:74839092-74839111 | Msa0622410:CDS | 35.0% | |
| ! | GAATGTGTTTGTTGATCCTA+GGG | - | chr4_2:74839134-74839153 | Msa0622410:CDS | 35.0% |
| AGATAGAGACGTTAAAGTGG+TGG | - | chr4_2:74837576-74837595 | Msa0622410:CDS | 40.0% | |
| GATAGAGACGTTAAAGTGGT+GGG | - | chr4_2:74837577-74837596 | Msa0622410:CDS | 40.0% | |
| ATAGAGACGTTAAAGTGGTG+GGG | - | chr4_2:74837578-74837597 | Msa0622410:CDS | 40.0% | |
| GTCACCATTACTCATCATGT+TGG | + | chr4_2:74837665-74837684 | None:intergenic | 40.0% | |
| GTAATGGTGACCCTTTATCT+AGG | - | chr4_2:74837674-74837693 | Msa0622410:CDS | 40.0% | |
| ! | GTGACCCTTTATCTAGGATT+AGG | - | chr4_2:74837680-74837699 | Msa0622410:CDS | 40.0% |
| ACACACCAACATAACACGAA+GGG | + | chr4_2:74837713-74837732 | None:intergenic | 40.0% | |
| TACACACCAACATAACACGA+AGG | + | chr4_2:74837714-74837733 | None:intergenic | 40.0% | |
| AGCTGAGATGGTTGAAAACA+AGG | - | chr4_2:74837889-74837908 | Msa0622410:CDS | 40.0% | |
| GTTGAAAACAAGGAGCTTGT+TGG | - | chr4_2:74837899-74837918 | Msa0622410:CDS | 40.0% | |
| !! | GAGCTTGTTGGAGTTGTTAA+AGG | - | chr4_2:74837911-74837930 | Msa0622410:CDS | 40.0% |
| ! | AAAAGTGTGCAAACTCCTTC+TGG | - | chr4_2:74837941-74837960 | Msa0622410:CDS | 40.0% |
| ATCTTGAAGAGTGATCCAGA+AGG | + | chr4_2:74837959-74837978 | None:intergenic | 40.0% | |
| TTCTGGATCACTCTTCAAGA+TGG | - | chr4_2:74837958-74837977 | Msa0622410:CDS | 40.0% | |
| TCTGGATCACTCTTCAAGAT+GGG | - | chr4_2:74837959-74837978 | Msa0622410:CDS | 40.0% | |
| TGTGTATAGGAGAGACTCTA+AGG | + | chr4_2:74837997-74838016 | None:intergenic | 40.0% | |
| TTAGAGTCTCTCCTATACAC+AGG | - | chr4_2:74837996-74838015 | Msa0622410:CDS | 40.0% | |
| CTGCGACCACTAAAATAGTT+AGG | + | chr4_2:74838160-74838179 | None:intergenic | 40.0% | |
| TAGCATCCACTCTTCAATTG+AGG | + | chr4_2:74838308-74838327 | None:intergenic | 40.0% | |
| GAAGAGTGGATGCTAAGAAA+TGG | - | chr4_2:74838313-74838332 | Msa0622410:CDS | 40.0% | |
| ! | ATTCTTTTCTGTGGCTAGGA+AGG | + | chr4_2:74838350-74838369 | None:intergenic | 40.0% |
| TTTGTTGGGAAACTAGTTGG+TGG | + | chr4_2:74838448-74838467 | None:intergenic | 40.0% | |
| !! | TGGTTTGTTGGGAAACTAGT+TGG | + | chr4_2:74838451-74838470 | None:intergenic | 40.0% |
| CTCAAAGAAAAACTCAGCCT+AGG | - | chr4_2:74838583-74838602 | Msa0622410:intron | 40.0% | |
| AAAAACTCAGCCTAGGAACT+TGG | - | chr4_2:74838590-74838609 | Msa0622410:intron | 40.0% | |
| AAAACTCAGCCTAGGAACTT+GGG | - | chr4_2:74838591-74838610 | Msa0622410:intron | 40.0% | |
| TCTTTATGGACTTCATGGAG+AGG | - | chr4_2:74838873-74838892 | Msa0622410:intron | 40.0% | |
| CTTTATGGACTTCATGGAGA+GGG | - | chr4_2:74838874-74838893 | Msa0622410:intron | 40.0% | |
| GGCTAATGGAATCAATATGG+AGG | - | chr4_2:74838911-74838930 | Msa0622410:intron | 40.0% | |
| TGAGGAACATGGTTTACAAG+TGG | + | chr4_2:74839006-74839025 | None:intergenic | 40.0% | |
| ! | GGAATGTGTTTGTTGATCCT+AGG | - | chr4_2:74839133-74839152 | Msa0622410:CDS | 40.0% |
| AGATAGAGACGTTAAAGTGG+TGG | - | chr4_2:74837576-74837595 | Msa0622410:CDS | 40.0% | |
| GATAGAGACGTTAAAGTGGT+GGG | - | chr4_2:74837577-74837596 | Msa0622410:CDS | 40.0% | |
| ATAGAGACGTTAAAGTGGTG+GGG | - | chr4_2:74837578-74837597 | Msa0622410:CDS | 40.0% | |
| GTCACCATTACTCATCATGT+TGG | + | chr4_2:74837665-74837684 | None:intergenic | 40.0% | |
| GTAATGGTGACCCTTTATCT+AGG | - | chr4_2:74837674-74837693 | Msa0622410:CDS | 40.0% | |
| ! | GTGACCCTTTATCTAGGATT+AGG | - | chr4_2:74837680-74837699 | Msa0622410:CDS | 40.0% |
| ACACACCAACATAACACGAA+GGG | + | chr4_2:74837713-74837732 | None:intergenic | 40.0% | |
| TACACACCAACATAACACGA+AGG | + | chr4_2:74837714-74837733 | None:intergenic | 40.0% | |
| AGCTGAGATGGTTGAAAACA+AGG | - | chr4_2:74837889-74837908 | Msa0622410:CDS | 40.0% | |
| GTTGAAAACAAGGAGCTTGT+TGG | - | chr4_2:74837899-74837918 | Msa0622410:CDS | 40.0% | |
| !! | GAGCTTGTTGGAGTTGTTAA+AGG | - | chr4_2:74837911-74837930 | Msa0622410:CDS | 40.0% |
| ! | AAAAGTGTGCAAACTCCTTC+TGG | - | chr4_2:74837941-74837960 | Msa0622410:CDS | 40.0% |
| ATCTTGAAGAGTGATCCAGA+AGG | + | chr4_2:74837959-74837978 | None:intergenic | 40.0% | |
| TTCTGGATCACTCTTCAAGA+TGG | - | chr4_2:74837958-74837977 | Msa0622410:CDS | 40.0% | |
| TCTGGATCACTCTTCAAGAT+GGG | - | chr4_2:74837959-74837978 | Msa0622410:CDS | 40.0% | |
| TGTGTATAGGAGAGACTCTA+AGG | + | chr4_2:74837997-74838016 | None:intergenic | 40.0% | |
| TTAGAGTCTCTCCTATACAC+AGG | - | chr4_2:74837996-74838015 | Msa0622410:CDS | 40.0% | |
| CTGCGACCACTAAAATAGTT+AGG | + | chr4_2:74838160-74838179 | None:intergenic | 40.0% | |
| TAGCATCCACTCTTCAATTG+AGG | + | chr4_2:74838308-74838327 | None:intergenic | 40.0% | |
| GAAGAGTGGATGCTAAGAAA+TGG | - | chr4_2:74838313-74838332 | Msa0622410:CDS | 40.0% | |
| ! | ATTCTTTTCTGTGGCTAGGA+AGG | + | chr4_2:74838350-74838369 | None:intergenic | 40.0% |
| TTTGTTGGGAAACTAGTTGG+TGG | + | chr4_2:74838448-74838467 | None:intergenic | 40.0% | |
| !! | TGGTTTGTTGGGAAACTAGT+TGG | + | chr4_2:74838451-74838470 | None:intergenic | 40.0% |
| CTCAAAGAAAAACTCAGCCT+AGG | - | chr4_2:74838583-74838602 | Msa0622410:intron | 40.0% | |
| AAAAACTCAGCCTAGGAACT+TGG | - | chr4_2:74838590-74838609 | Msa0622410:intron | 40.0% | |
| AAAACTCAGCCTAGGAACTT+GGG | - | chr4_2:74838591-74838610 | Msa0622410:intron | 40.0% | |
| TCTTTATGGACTTCATGGAG+AGG | - | chr4_2:74838873-74838892 | Msa0622410:intron | 40.0% | |
| CTTTATGGACTTCATGGAGA+GGG | - | chr4_2:74838874-74838893 | Msa0622410:intron | 40.0% | |
| GGCTAATGGAATCAATATGG+AGG | - | chr4_2:74838911-74838930 | Msa0622410:intron | 40.0% | |
| TGAGGAACATGGTTTACAAG+TGG | + | chr4_2:74839006-74839025 | None:intergenic | 40.0% | |
| ! | GGAATGTGTTTGTTGATCCT+AGG | - | chr4_2:74839133-74839152 | Msa0622410:CDS | 40.0% |
| CACATACAGTATAGAGAGCG+AGG | - | chr4_2:74837531-74837550 | Msa0622410:CDS | 45.0% | |
| CTATCCCCTTCGTGTTATGT+TGG | - | chr4_2:74837705-74837724 | Msa0622410:CDS | 45.0% | |
| CACACCAACATAACACGAAG+GGG | + | chr4_2:74837712-74837731 | None:intergenic | 45.0% | |
| GATGATACATAATGGCCTGC+AGG | - | chr4_2:74837865-74837884 | Msa0622410:CDS | 45.0% | |
| !! | TTGGGAAACTAGTTGGTGGA+TGG | + | chr4_2:74838444-74838463 | None:intergenic | 45.0% |
| GTCGCATGAAGAAACCTAAG+TGG | + | chr4_2:74838769-74838788 | None:intergenic | 45.0% | |
| ! | GCGGGCTAATGGAATCAATA+TGG | - | chr4_2:74838908-74838927 | Msa0622410:intron | 45.0% |
| GAGGTGATGAAGAGACAACT+CGG | - | chr4_2:74839111-74839130 | Msa0622410:CDS | 45.0% | |
| AGGTGATGAAGAGACAACTC+GGG | - | chr4_2:74839112-74839131 | Msa0622410:CDS | 45.0% | |
| CACATACAGTATAGAGAGCG+AGG | - | chr4_2:74837531-74837550 | Msa0622410:CDS | 45.0% | |
| CTATCCCCTTCGTGTTATGT+TGG | - | chr4_2:74837705-74837724 | Msa0622410:CDS | 45.0% | |
| CACACCAACATAACACGAAG+GGG | + | chr4_2:74837712-74837731 | None:intergenic | 45.0% | |
| GATGATACATAATGGCCTGC+AGG | - | chr4_2:74837865-74837884 | Msa0622410:CDS | 45.0% | |
| !! | TTGGGAAACTAGTTGGTGGA+TGG | + | chr4_2:74838444-74838463 | None:intergenic | 45.0% |
| GTCGCATGAAGAAACCTAAG+TGG | + | chr4_2:74838769-74838788 | None:intergenic | 45.0% | |
| ! | GCGGGCTAATGGAATCAATA+TGG | - | chr4_2:74838908-74838927 | Msa0622410:intron | 45.0% |
| GAGGTGATGAAGAGACAACT+CGG | - | chr4_2:74839111-74839130 | Msa0622410:CDS | 45.0% | |
| AGGTGATGAAGAGACAACTC+GGG | - | chr4_2:74839112-74839131 | Msa0622410:CDS | 45.0% | |
| CATGGAGAGGGAGAGAATCT+TGG | - | chr4_2:74838886-74838905 | Msa0622410:intron | 50.0% | |
| !! | AGAGAATCTTGGCGGGCTAA+TGG | - | chr4_2:74838897-74838916 | Msa0622410:intron | 50.0% |
| CATGGAGAGGGAGAGAATCT+TGG | - | chr4_2:74838886-74838905 | Msa0622410:intron | 50.0% | |
| !! | AGAGAATCTTGGCGGGCTAA+TGG | - | chr4_2:74838897-74838916 | Msa0622410:intron | 50.0% |
| ! | GAGACGTTAAAGTGGTGGGG+AGG | - | chr4_2:74837581-74837600 | Msa0622410:CDS | 55.0% |
| CAACCATCTCAGCTACCTGC+AGG | + | chr4_2:74837883-74837902 | None:intergenic | 55.0% | |
| CTGTGCAGGAGAAAGGGAGT+TGG | - | chr4_2:74838268-74838287 | Msa0622410:CDS | 55.0% | |
| GGAGAGGGAGAGAATCTTGG+CGG | - | chr4_2:74838889-74838908 | Msa0622410:intron | 55.0% | |
| GAGAGGGAGAGAATCTTGGC+GGG | - | chr4_2:74838890-74838909 | Msa0622410:intron | 55.0% | |
| ! | GAGACGTTAAAGTGGTGGGG+AGG | - | chr4_2:74837581-74837600 | Msa0622410:CDS | 55.0% |
| CAACCATCTCAGCTACCTGC+AGG | + | chr4_2:74837883-74837902 | None:intergenic | 55.0% | |
| CTGTGCAGGAGAAAGGGAGT+TGG | - | chr4_2:74838268-74838287 | Msa0622410:CDS | 55.0% | |
| GGAGAGGGAGAGAATCTTGG+CGG | - | chr4_2:74838889-74838908 | Msa0622410:intron | 55.0% | |
| GAGAGGGAGAGAATCTTGGC+GGG | - | chr4_2:74838890-74838909 | Msa0622410:intron | 55.0% | |
| TGGCCTGCAGGTAGCTGAGA+TGG | - | chr4_2:74837877-74837896 | Msa0622410:CDS | 60.0% | |
| TGGCCTGCAGGTAGCTGAGA+TGG | - | chr4_2:74837877-74837896 | Msa0622410:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 74837523 | 74839164 | 74837523 | ID=Msa0622410;Name=Msa0622410 |
| chr4_2 | mRNA | 74837523 | 74839164 | 74837523 | ID=Msa0622410-mRNA-1;Parent=Msa0622410;Name=Msa0622410-mRNA-1;_AED=0.01;_eAED=0.10;_QI=0|0|0|1|1|1|3|0|407 |
| chr4_2 | exon | 74838961 | 74839164 | 74838961 | ID=Msa0622410-mRNA-1:exon:22688;Parent=Msa0622410-mRNA-1 |
| chr4_2 | exon | 74838670 | 74838800 | 74838670 | ID=Msa0622410-mRNA-1:exon:22687;Parent=Msa0622410-mRNA-1 |
| chr4_2 | exon | 74837523 | 74838411 | 74837523 | ID=Msa0622410-mRNA-1:exon:22686;Parent=Msa0622410-mRNA-1 |
| chr4_2 | CDS | 74838961 | 74839164 | 74838961 | ID=Msa0622410-mRNA-1:cds;Parent=Msa0622410-mRNA-1 |
| chr4_2 | CDS | 74838670 | 74838800 | 74838670 | ID=Msa0622410-mRNA-1:cds;Parent=Msa0622410-mRNA-1 |
| chr4_2 | CDS | 74837523 | 74838411 | 74837523 | ID=Msa0622410-mRNA-1:cds;Parent=Msa0622410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
