Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0635610 | KEH19491.1 | 86.486 | 74 | 3 | 1 | 2 | 75 | 55 | 121 | 8.90e-36 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0635610 | sp|F4I171|MD15A_ARATH | 64.179 | 67 | 24 | 0 | 2 | 68 | 1267 | 1333 | 1.36e-20 | 87.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004880 | Msa0635610 | 0.807104 | 5.947865e-50 | -8.615850e-47 |
| Msa0045770 | Msa0635610 | 0.801529 | 8.626621e-49 | -8.615850e-47 |
| Msa0051790 | Msa0635610 | 0.802821 | 4.676634e-49 | -8.615850e-47 |
| Msa0089360 | Msa0635610 | 0.803487 | 3.406130e-49 | -8.615850e-47 |
| Msa0112750 | Msa0635610 | 0.830325 | 3.129322e-55 | -8.615850e-47 |
| Msa0635610 | Msa0644840 | 0.800700 | 1.274524e-48 | -8.615850e-47 |
| Msa0635610 | Msa0657970 | 0.826825 | 2.193768e-54 | -8.615850e-47 |
| Msa0635610 | Msa0667050 | 0.812687 | 3.740243e-51 | -8.615850e-47 |
| Msa0635610 | Msa0688480 | 0.800771 | 1.232622e-48 | -8.615850e-47 |
| Msa0635610 | Msa0693380 | 0.810776 | 9.743115e-51 | -8.615850e-47 |
| Msa0635610 | Msa0696640 | 0.831313 | 1.791623e-55 | -8.615850e-47 |
| Msa0635610 | Msa0793640 | 0.802982 | 4.331624e-49 | -8.615850e-47 |
| Msa0635610 | Msa0820770 | 0.804699 | 1.905249e-49 | -8.615850e-47 |
| Msa0635610 | Msa0887990 | 0.802431 | 5.629960e-49 | -8.615850e-47 |
| Msa0635610 | Msa0990350 | 0.806499 | 7.984960e-50 | -8.615850e-47 |
| Msa0635610 | Msa1015790 | 0.813148 | 2.963796e-51 | -8.615850e-47 |
| Msa0635610 | Msa1082500 | 0.847521 | 1.097166e-59 | -8.615850e-47 |
| Msa0635610 | Msa1098400 | 0.825624 | 4.234284e-54 | -8.615850e-47 |
| Msa0635610 | Msa1098420 | 0.808324 | 3.275742e-50 | -8.615850e-47 |
| Msa0635610 | Msa1172670 | 0.818606 | 1.795931e-52 | -8.615850e-47 |
| Msa0635610 | Msa1331000 | 0.802445 | 5.592751e-49 | -8.615850e-47 |
| Msa0635610 | Msa1392260 | 0.809903 | 1.503549e-50 | -8.615850e-47 |
| Msa0635610 | Msa1397250 | 0.803381 | 3.582889e-49 | -8.615850e-47 |
| Msa0635610 | Msa1397610 | 0.802390 | 5.740469e-49 | -8.615850e-47 |
| Msa0635610 | Msa1411020 | 0.819281 | 1.261250e-52 | -8.615850e-47 |
| Msa0635610 | Msa1420140 | 0.810715 | 1.004048e-50 | -8.615850e-47 |
| Msa0635610 | Msa1420490 | 0.813814 | 2.115196e-51 | -8.615850e-47 |
| Msa0635610 | Msa1423390 | 0.815152 | 1.070249e-51 | -8.615850e-47 |
| Msa0635610 | Msa1424290 | 0.814560 | 1.448113e-51 | -8.615850e-47 |
| Msa0635610 | Msa1425100 | 0.829612 | 4.669094e-55 | -8.615850e-47 |
| Msa0635610 | Msa1429900 | 0.807824 | 4.185977e-50 | -8.615850e-47 |
| Msa0635610 | Msa1434350 | 0.817149 | 3.831073e-52 | -8.615850e-47 |
| Msa0635610 | Msa1439320 | 0.817833 | 2.686451e-52 | -8.615850e-47 |
| Msa0635610 | Msa1440370 | 0.812287 | 4.573341e-51 | -8.615850e-47 |
| Msa0635610 | Msa1440810 | 0.817200 | 3.730476e-52 | -8.615850e-47 |
| Msa0635610 | Msa1452240 | 0.800232 | 1.587634e-48 | -8.615850e-47 |
| Msa0122590 | Msa0635610 | 0.801406 | 9.143001e-49 | -8.615850e-47 |
| Msa0166870 | Msa0635610 | 0.809747 | 1.623908e-50 | -8.615850e-47 |
| Msa0220580 | Msa0635610 | 0.822588 | 2.185983e-53 | -8.615850e-47 |
| Msa0376590 | Msa0635610 | 0.803002 | 4.291786e-49 | -8.615850e-47 |
| Msa0379640 | Msa0635610 | 0.843174 | 1.647622e-58 | -8.615850e-47 |
| Msa0428930 | Msa0635610 | 0.816343 | 5.807903e-52 | -8.615850e-47 |
| Msa0475490 | Msa0635610 | 0.808148 | 3.570752e-50 | -8.615850e-47 |
| Msa0287410 | Msa0635610 | 0.810121 | 1.349250e-50 | -8.615850e-47 |
| Msa0484780 | Msa0635610 | 0.834476 | 2.931502e-56 | -8.615850e-47 |
| Msa0512890 | Msa0635610 | 0.803544 | 3.313739e-49 | -8.615850e-47 |
| Msa0512900 | Msa0635610 | 0.820740 | 5.847914e-53 | -8.615850e-47 |
| Msa0516440 | Msa0635610 | 0.812735 | 3.651066e-51 | -8.615850e-47 |
| Msa0523460 | Msa0635610 | 0.813459 | 2.532611e-51 | -8.615850e-47 |
| Msa0532350 | Msa0635610 | 0.811119 | 8.208697e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0635610 | MtrunA17_Chr4g0002981 | 86.301 | 73 | 10 | 0 | 3 | 75 | 1218 | 1290 | 1.03e-35 | 126 |
| Msa0635610 | MtrunA17_Chr2g0333451 | 69.231 | 65 | 20 | 0 | 5 | 69 | 1225 | 1289 | 3.87e-23 | 90.9 |
| Msa0635610 | MtrunA17_Chr8g0354961 | 47.458 | 59 | 31 | 0 | 6 | 64 | 131 | 189 | 2.46e-11 | 56.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0635610 | AT1G15780.3 | 64.179 | 67 | 24 | 0 | 2 | 68 | 1289 | 1355 | 1.27e-21 | 87.0 |
| Msa0635610 | AT1G15780.1 | 64.179 | 67 | 24 | 0 | 2 | 68 | 1267 | 1333 | 1.38e-21 | 87.0 |
| Msa0635610 | AT2G10440.2 | 49.153 | 59 | 30 | 0 | 6 | 64 | 781 | 839 | 1.34e-12 | 61.2 |
| Msa0635610 | AT2G10440.1 | 49.153 | 59 | 30 | 0 | 6 | 64 | 871 | 929 | 1.53e-12 | 61.2 |
Find 16 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAGTATGCACAACAATT+TGG | 0.247064 | 4_3:-24783362 | Msa0635610:CDS |
| AAGTCTTTGCTATATCCTTA+AGG | 0.366345 | 4_3:+24783411 | None:intergenic |
| CTCACAACCTATGTCCCTTA+AGG | 0.372725 | 4_3:-24783426 | Msa0635610:CDS |
| GGAACATTCAGCTCTAAGTA+TGG | 0.422754 | 4_3:-24783335 | Msa0635610:CDS |
| GCTATATCCTTAAGGGACAT+AGG | 0.441593 | 4_3:+24783419 | None:intergenic |
| AGTCTTTGCTATATCCTTAA+GGG | 0.444176 | 4_3:+24783412 | None:intergenic |
| ATGGCAGGAGTTCACATCTT+GGG | 0.498030 | 4_3:-24783309 | Msa0635610:CDS |
| CTCTAAGTATGGAGAATGGC+AGG | 0.507662 | 4_3:-24783324 | Msa0635610:CDS |
| GAAATAACACCGCGAGCAGT+AGG | 0.532677 | 4_3:+24783383 | None:intergenic |
| GAGTATGCACAACAATTTGG+TGG | 0.545184 | 4_3:-24783359 | Msa0635610:CDS |
| AATGGCAGGAGTTCACATCT+TGG | 0.551776 | 4_3:-24783310 | Msa0635610:CDS |
| AGGTTGTGAGAAATTACATA+AGG | 0.561974 | 4_3:+24783439 | None:intergenic |
| TTATGGCAGTAAGGGGAATG+AGG | 0.594861 | 4_3:-24783498 | Msa0635610:intron |
| TCAGCTCTAAGTATGGAGAA+TGG | 0.598733 | 4_3:-24783328 | Msa0635610:CDS |
| ACTTGTGATCCTACTGCTCG+CGG | 0.635100 | 4_3:-24783392 | Msa0635610:CDS |
| TATGCACAACAATTTGGTGG+AGG | 0.647411 | 4_3:-24783356 | Msa0635610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAACATGT+GGG | + | chr4_3:24784854-24784873 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAACATG+TGG | + | chr4_3:24784855-24784874 | None:intergenic | 10.0% |
| !!! | CATGTTTTTTTTTTTTTTTT+TGG | - | chr4_3:24784855-24784874 | Msa0635610:intron | 10.0% |
| !! | AAAAAAAAAAAAAAACATGT+GGG | + | chr4_3:24784854-24784873 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAACATG+TGG | + | chr4_3:24784855-24784874 | None:intergenic | 10.0% |
| !!! | CATGTTTTTTTTTTTTTTTT+TGG | - | chr4_3:24784855-24784874 | Msa0635610:intron | 10.0% |
| !! | TGTATTAAAAAAATTTACAG+TGG | + | chr4_3:24783698-24783717 | None:intergenic | 15.0% |
| !!! | ACATATTTTGATTTTAAAGA+CGG | + | chr4_3:24784008-24784027 | None:intergenic | 15.0% |
| !!! | ATTTTGTTCATTTTTTGATA+AGG | - | chr4_3:24784299-24784318 | Msa0635610:intron | 15.0% |
| !!! | TTTTGTTCATTTTTTGATAA+GGG | - | chr4_3:24784300-24784319 | Msa0635610:intron | 15.0% |
| !!! | ATTTATGTATATGTATTTTG+TGG | - | chr4_3:24784481-24784500 | Msa0635610:intron | 15.0% |
| !!! | ATTGAACATTATTTTTGTTT+TGG | - | chr4_3:24784550-24784569 | Msa0635610:intron | 15.0% |
| !! | AAAAAAAAAAAAAACATGTG+GGG | + | chr4_3:24784853-24784872 | None:intergenic | 15.0% |
| !! | TGTATTAAAAAAATTTACAG+TGG | + | chr4_3:24783698-24783717 | None:intergenic | 15.0% |
| !!! | ACATATTTTGATTTTAAAGA+CGG | + | chr4_3:24784008-24784027 | None:intergenic | 15.0% |
| !!! | ATTTTGTTCATTTTTTGATA+AGG | - | chr4_3:24784299-24784318 | Msa0635610:intron | 15.0% |
| !!! | TTTTGTTCATTTTTTGATAA+GGG | - | chr4_3:24784300-24784319 | Msa0635610:intron | 15.0% |
| !!! | ATTTATGTATATGTATTTTG+TGG | - | chr4_3:24784481-24784500 | Msa0635610:intron | 15.0% |
| !!! | ATTGAACATTATTTTTGTTT+TGG | - | chr4_3:24784550-24784569 | Msa0635610:intron | 15.0% |
| !! | AAAAAAAAAAAAAACATGTG+GGG | + | chr4_3:24784853-24784872 | None:intergenic | 15.0% |
| !! | TTTAGAGAAATATGGAATAT+CGG | + | chr4_3:24783450-24783469 | None:intergenic | 20.0% |
| !!! | TTGATTTGCTTTTCTAAAAA+GGG | - | chr4_3:24783496-24783515 | Msa0635610:intron | 20.0% |
| !!! | CATATTTTGATTTTAAAGAC+GGG | + | chr4_3:24784007-24784026 | None:intergenic | 20.0% |
| !! | AAGGTTATAAAACACAAATA+AGG | + | chr4_3:24784093-24784112 | None:intergenic | 20.0% |
| !!! | AGTGAAAGAATGAAATTTTT+TGG | + | chr4_3:24784398-24784417 | None:intergenic | 20.0% |
| !! | ACTAAAGAATATTTGTATCT+AGG | - | chr4_3:24784449-24784468 | Msa0635610:intron | 20.0% |
| !!! | TGCTTTAATTTTGCTAATTT+CGG | - | chr4_3:24784892-24784911 | Msa0635610:intron | 20.0% |
| !!! | TAGTGTTATTATATACGTTA+TGG | - | chr4_3:24785022-24785041 | Msa0635610:intron | 20.0% |
| !! | TTTAGAGAAATATGGAATAT+CGG | + | chr4_3:24783450-24783469 | None:intergenic | 20.0% |
| !!! | TTGATTTGCTTTTCTAAAAA+GGG | - | chr4_3:24783496-24783515 | Msa0635610:intron | 20.0% |
| !!! | CATATTTTGATTTTAAAGAC+GGG | + | chr4_3:24784007-24784026 | None:intergenic | 20.0% |
| !! | AAGGTTATAAAACACAAATA+AGG | + | chr4_3:24784093-24784112 | None:intergenic | 20.0% |
| !!! | AGTGAAAGAATGAAATTTTT+TGG | + | chr4_3:24784398-24784417 | None:intergenic | 20.0% |
| !! | ACTAAAGAATATTTGTATCT+AGG | - | chr4_3:24784449-24784468 | Msa0635610:intron | 20.0% |
| !!! | TGCTTTAATTTTGCTAATTT+CGG | - | chr4_3:24784892-24784911 | Msa0635610:intron | 20.0% |
| !!! | TAGTGTTATTATATACGTTA+TGG | - | chr4_3:24785022-24785041 | Msa0635610:intron | 20.0% |
| ! | AATTATTCTAGCATTCATGT+AGG | - | chr4_3:24783424-24783443 | Msa0635610:CDS | 25.0% |
| !!! | GTTGATTTGCTTTTCTAAAA+AGG | - | chr4_3:24783495-24783514 | Msa0635610:intron | 25.0% |
| !! | CATTTGGAATATGTTTGATA+TGG | - | chr4_3:24783599-24783618 | Msa0635610:intron | 25.0% |
| ! | ACTGTAAACTAATCAAACAT+GGG | + | chr4_3:24783653-24783672 | None:intergenic | 25.0% |
| ! | AACTGTAAACTAATCAAACA+TGG | + | chr4_3:24783654-24783673 | None:intergenic | 25.0% |
| ! | AAAATTTACAGTGGCTTAAT+GGG | + | chr4_3:24783689-24783708 | None:intergenic | 25.0% |
| ! | AAAAATTTACAGTGGCTTAA+TGG | + | chr4_3:24783690-24783709 | None:intergenic | 25.0% |
| ! | AATGAAACAACATTTGACAA+TGG | + | chr4_3:24783970-24783989 | None:intergenic | 25.0% |
| ! | AATATGTTTCACTACAAGTA+TGG | - | chr4_3:24784021-24784040 | Msa0635610:intron | 25.0% |
| ! | AAAAATCAGTTGCAAAATCT+GGG | + | chr4_3:24784050-24784069 | None:intergenic | 25.0% |
| ! | AAAAAATCAGTTGCAAAATC+TGG | + | chr4_3:24784051-24784070 | None:intergenic | 25.0% |
| !!! | TTTTGATAACAATGACTGTA+AGG | + | chr4_3:24784112-24784131 | None:intergenic | 25.0% |
| ! | ACAGTCATTGTTATCAAAAA+CGG | - | chr4_3:24784113-24784132 | Msa0635610:intron | 25.0% |
| !!! | ATGAAATTTTTTGGCCTTTA+GGG | + | chr4_3:24784389-24784408 | None:intergenic | 25.0% |
| !!! | AATGAAATTTTTTGGCCTTT+AGG | + | chr4_3:24784390-24784409 | None:intergenic | 25.0% |
| ! | AAAATCGCAATTAAAATCGA+GGG | + | chr4_3:24784659-24784678 | None:intergenic | 25.0% |
| ! | TAAAATCGCAATTAAAATCG+AGG | + | chr4_3:24784660-24784679 | None:intergenic | 25.0% |
| ! | TTAGCAAAATTAAAGCATGT+GGG | + | chr4_3:24784889-24784908 | None:intergenic | 25.0% |
| ! | ATTAGCAAAATTAAAGCATG+TGG | + | chr4_3:24784890-24784909 | None:intergenic | 25.0% |
| ! | AATTATTCTAGCATTCATGT+AGG | - | chr4_3:24783424-24783443 | Msa0635610:CDS | 25.0% |
| !!! | GTTGATTTGCTTTTCTAAAA+AGG | - | chr4_3:24783495-24783514 | Msa0635610:intron | 25.0% |
| !! | CATTTGGAATATGTTTGATA+TGG | - | chr4_3:24783599-24783618 | Msa0635610:intron | 25.0% |
| ! | ACTGTAAACTAATCAAACAT+GGG | + | chr4_3:24783653-24783672 | None:intergenic | 25.0% |
| ! | AACTGTAAACTAATCAAACA+TGG | + | chr4_3:24783654-24783673 | None:intergenic | 25.0% |
| ! | AAAATTTACAGTGGCTTAAT+GGG | + | chr4_3:24783689-24783708 | None:intergenic | 25.0% |
| ! | AAAAATTTACAGTGGCTTAA+TGG | + | chr4_3:24783690-24783709 | None:intergenic | 25.0% |
| ! | AATGAAACAACATTTGACAA+TGG | + | chr4_3:24783970-24783989 | None:intergenic | 25.0% |
| ! | AATATGTTTCACTACAAGTA+TGG | - | chr4_3:24784021-24784040 | Msa0635610:intron | 25.0% |
| ! | AAAAATCAGTTGCAAAATCT+GGG | + | chr4_3:24784050-24784069 | None:intergenic | 25.0% |
| ! | AAAAAATCAGTTGCAAAATC+TGG | + | chr4_3:24784051-24784070 | None:intergenic | 25.0% |
| !!! | TTTTGATAACAATGACTGTA+AGG | + | chr4_3:24784112-24784131 | None:intergenic | 25.0% |
| ! | ACAGTCATTGTTATCAAAAA+CGG | - | chr4_3:24784113-24784132 | Msa0635610:intron | 25.0% |
| !!! | ATGAAATTTTTTGGCCTTTA+GGG | + | chr4_3:24784389-24784408 | None:intergenic | 25.0% |
| !!! | AATGAAATTTTTTGGCCTTT+AGG | + | chr4_3:24784390-24784409 | None:intergenic | 25.0% |
| ! | AAAATCGCAATTAAAATCGA+GGG | + | chr4_3:24784659-24784678 | None:intergenic | 25.0% |
| ! | TAAAATCGCAATTAAAATCG+AGG | + | chr4_3:24784660-24784679 | None:intergenic | 25.0% |
| ! | TTAGCAAAATTAAAGCATGT+GGG | + | chr4_3:24784889-24784908 | None:intergenic | 25.0% |
| ! | ATTAGCAAAATTAAAGCATG+TGG | + | chr4_3:24784890-24784909 | None:intergenic | 25.0% |
| ATAAAACAACTGACCTCTAT+TGG | + | chr4_3:24783354-24783373 | None:intergenic | 30.0% | |
| !! | GGTCAGTTGTTTTATATTGA+TGG | - | chr4_3:24783359-24783378 | Msa0635610:CDS | 30.0% |
| AGACATGTTAAACTCTTATC+TGG | - | chr4_3:24783383-24783402 | Msa0635610:CDS | 30.0% | |
| AAAGACGGTTTAGAGAAATA+TGG | + | chr4_3:24783458-24783477 | None:intergenic | 30.0% | |
| AAACTCATAAAAGCGATTAG+AGG | - | chr4_3:24783549-24783568 | Msa0635610:intron | 30.0% | |
| AACTCATAAAAGCGATTAGA+GGG | - | chr4_3:24783550-24783569 | Msa0635610:intron | 30.0% | |
| ATATGCTACTGTCATTAACT+TGG | - | chr4_3:24783573-24783592 | Msa0635610:intron | 30.0% | |
| TTGCTGTATTTCTTCCAAAA+GGG | + | chr4_3:24783849-24783868 | None:intergenic | 30.0% | |
| ! | TTTGCTGTATTTCTTCCAAA+AGG | + | chr4_3:24783850-24783869 | None:intergenic | 30.0% |
| CTACTACTGTGTCAATAATT+CGG | + | chr4_3:24783880-24783899 | None:intergenic | 30.0% | |
| CAGTCATTGTTATCAAAAAC+GGG | - | chr4_3:24784114-24784133 | Msa0635610:intron | 30.0% | |
| !! | ATAGGATTTTGCCTGTTTTT+AGG | + | chr4_3:24784208-24784227 | None:intergenic | 30.0% |
| !! | CGATTTTATGCGATTTTGAT+AGG | + | chr4_3:24784226-24784245 | None:intergenic | 30.0% |
| !!! | AGGATTTTGATGGATTTTGA+AGG | - | chr4_3:24784276-24784295 | Msa0635610:intron | 30.0% |
| ! | TTTAGGGTATTCATAGAATC+GGG | + | chr4_3:24784373-24784392 | None:intergenic | 30.0% |
| !! | CTTTAGGGTATTCATAGAAT+CGG | + | chr4_3:24784374-24784393 | None:intergenic | 30.0% |
| TTAGTAGTCACAAAGAATGA+AGG | + | chr4_3:24784434-24784453 | None:intergenic | 30.0% | |
| TAAAATCGCAATCAAAATCG+AGG | + | chr4_3:24784582-24784601 | None:intergenic | 30.0% | |
| TAAGCAAGGTTATCAAAATC+GGG | + | chr4_3:24784725-24784744 | None:intergenic | 30.0% | |
| GTAAGCAAGGTTATCAAAAT+CGG | + | chr4_3:24784726-24784745 | None:intergenic | 30.0% | |
| ATGAATATGGGAGAAGAATT+AGG | + | chr4_3:24784793-24784812 | None:intergenic | 30.0% | |
| GATTCAACTGGTATGAATAT+GGG | + | chr4_3:24784805-24784824 | None:intergenic | 30.0% | |
| AAAATGTTCCATTATCTCAC+CGG | + | chr4_3:24784828-24784847 | None:intergenic | 30.0% | |
| TAGCAAAATTAAAGCATGTG+GGG | + | chr4_3:24784888-24784907 | None:intergenic | 30.0% | |
| ! | GTATTTTCTCTTCCAAATAG+TGG | - | chr4_3:24784929-24784948 | Msa0635610:intron | 30.0% |
| GCAGCAAAATTTAAAGGTAA+GGG | + | chr4_3:24784985-24785004 | None:intergenic | 30.0% | |
| CAATTCGCAGCAAAATTTAA+AGG | + | chr4_3:24784991-24785010 | None:intergenic | 30.0% | |
| TTATATACGTTATGGCAGTA+AGG | - | chr4_3:24785030-24785049 | Msa0635610:intron | 30.0% | |
| TATATACGTTATGGCAGTAA+GGG | - | chr4_3:24785031-24785050 | Msa0635610:intron | 30.0% | |
| AGGTTGTGAGAAATTACATA+AGG | + | chr4_3:24785101-24785120 | None:intergenic | 30.0% | |
| ! | AGTCTTTGCTATATCCTTAA+GGG | + | chr4_3:24785128-24785147 | None:intergenic | 30.0% |
| ! | AAGTCTTTGCTATATCCTTA+AGG | + | chr4_3:24785129-24785148 | None:intergenic | 30.0% |
| ATAAAACAACTGACCTCTAT+TGG | + | chr4_3:24783354-24783373 | None:intergenic | 30.0% | |
| !! | GGTCAGTTGTTTTATATTGA+TGG | - | chr4_3:24783359-24783378 | Msa0635610:CDS | 30.0% |
| AGACATGTTAAACTCTTATC+TGG | - | chr4_3:24783383-24783402 | Msa0635610:CDS | 30.0% | |
| AAAGACGGTTTAGAGAAATA+TGG | + | chr4_3:24783458-24783477 | None:intergenic | 30.0% | |
| AAACTCATAAAAGCGATTAG+AGG | - | chr4_3:24783549-24783568 | Msa0635610:intron | 30.0% | |
| AACTCATAAAAGCGATTAGA+GGG | - | chr4_3:24783550-24783569 | Msa0635610:intron | 30.0% | |
| ATATGCTACTGTCATTAACT+TGG | - | chr4_3:24783573-24783592 | Msa0635610:intron | 30.0% | |
| TTGCTGTATTTCTTCCAAAA+GGG | + | chr4_3:24783849-24783868 | None:intergenic | 30.0% | |
| ! | TTTGCTGTATTTCTTCCAAA+AGG | + | chr4_3:24783850-24783869 | None:intergenic | 30.0% |
| CTACTACTGTGTCAATAATT+CGG | + | chr4_3:24783880-24783899 | None:intergenic | 30.0% | |
| CAGTCATTGTTATCAAAAAC+GGG | - | chr4_3:24784114-24784133 | Msa0635610:intron | 30.0% | |
| !! | ATAGGATTTTGCCTGTTTTT+AGG | + | chr4_3:24784208-24784227 | None:intergenic | 30.0% |
| !! | CGATTTTATGCGATTTTGAT+AGG | + | chr4_3:24784226-24784245 | None:intergenic | 30.0% |
| !!! | AGGATTTTGATGGATTTTGA+AGG | - | chr4_3:24784276-24784295 | Msa0635610:intron | 30.0% |
| ! | TTTAGGGTATTCATAGAATC+GGG | + | chr4_3:24784373-24784392 | None:intergenic | 30.0% |
| !! | CTTTAGGGTATTCATAGAAT+CGG | + | chr4_3:24784374-24784393 | None:intergenic | 30.0% |
| TTAGTAGTCACAAAGAATGA+AGG | + | chr4_3:24784434-24784453 | None:intergenic | 30.0% | |
| TAAAATCGCAATCAAAATCG+AGG | + | chr4_3:24784582-24784601 | None:intergenic | 30.0% | |
| TAAGCAAGGTTATCAAAATC+GGG | + | chr4_3:24784725-24784744 | None:intergenic | 30.0% | |
| GTAAGCAAGGTTATCAAAAT+CGG | + | chr4_3:24784726-24784745 | None:intergenic | 30.0% | |
| ATGAATATGGGAGAAGAATT+AGG | + | chr4_3:24784793-24784812 | None:intergenic | 30.0% | |
| GATTCAACTGGTATGAATAT+GGG | + | chr4_3:24784805-24784824 | None:intergenic | 30.0% | |
| AAAATGTTCCATTATCTCAC+CGG | + | chr4_3:24784828-24784847 | None:intergenic | 30.0% | |
| TAGCAAAATTAAAGCATGTG+GGG | + | chr4_3:24784888-24784907 | None:intergenic | 30.0% | |
| ! | GTATTTTCTCTTCCAAATAG+TGG | - | chr4_3:24784929-24784948 | Msa0635610:intron | 30.0% |
| GCAGCAAAATTTAAAGGTAA+GGG | + | chr4_3:24784985-24785004 | None:intergenic | 30.0% | |
| CAATTCGCAGCAAAATTTAA+AGG | + | chr4_3:24784991-24785010 | None:intergenic | 30.0% | |
| TTATATACGTTATGGCAGTA+AGG | - | chr4_3:24785030-24785049 | Msa0635610:intron | 30.0% | |
| TATATACGTTATGGCAGTAA+GGG | - | chr4_3:24785031-24785050 | Msa0635610:intron | 30.0% | |
| AGGTTGTGAGAAATTACATA+AGG | + | chr4_3:24785101-24785120 | None:intergenic | 30.0% | |
| ! | AGTCTTTGCTATATCCTTAA+GGG | + | chr4_3:24785128-24785147 | None:intergenic | 30.0% |
| ! | AAGTCTTTGCTATATCCTTA+AGG | + | chr4_3:24785129-24785148 | None:intergenic | 30.0% |
| TGAAGCAAGTACTTCAAAGA+CGG | + | chr4_3:24783473-24783492 | None:intergenic | 35.0% | |
| ! | CAATAACCGATCTGATGTTT+TGG | - | chr4_3:24783776-24783795 | Msa0635610:intron | 35.0% |
| CAAAGACCAAAACATCAGAT+CGG | + | chr4_3:24783785-24783804 | None:intergenic | 35.0% | |
| GATATAGAGTTTGTGTACTG+TGG | - | chr4_3:24783810-24783829 | Msa0635610:intron | 35.0% | |
| !!! | CTGTTTTTAGGACTTTGCTA+TGG | + | chr4_3:24784196-24784215 | None:intergenic | 35.0% |
| CATAGCAAAGTCCTAAAAAC+AGG | - | chr4_3:24784194-24784213 | Msa0635610:intron | 35.0% | |
| ! | CAAAATCCTGCGATTTTGAA+CGG | + | chr4_3:24784265-24784284 | None:intergenic | 35.0% |
| ! | TCAAAATCGCAGGATTTTGA+TGG | - | chr4_3:24784266-24784285 | Msa0635610:intron | 35.0% |
| !!! | TAAGGGTCAATTTTTTGACC+CGG | - | chr4_3:24784317-24784336 | Msa0635610:intron | 35.0% |
| !! | ATCGGGTAATGGATTCAAAT+CGG | + | chr4_3:24784356-24784375 | None:intergenic | 35.0% |
| GTATTCATAGAATCGGGTAA+TGG | + | chr4_3:24784367-24784386 | None:intergenic | 35.0% | |
| CGATTCTATGAATACCCTAA+AGG | - | chr4_3:24784372-24784391 | Msa0635610:intron | 35.0% | |
| ! | AAAGAATGAAGGAAAGTGTG+GGG | + | chr4_3:24784423-24784442 | None:intergenic | 35.0% |
| ! | CAAAGAATGAAGGAAAGTGT+GGG | + | chr4_3:24784424-24784443 | None:intergenic | 35.0% |
| ACAAAGAATGAAGGAAAGTG+TGG | + | chr4_3:24784425-24784444 | None:intergenic | 35.0% | |
| ! | GACTTTTGTAGAATCGATAG+AGG | + | chr4_3:24784624-24784643 | None:intergenic | 35.0% |
| ! | AAATCGAGGGATTTTACTCA+AGG | + | chr4_3:24784646-24784665 | None:intergenic | 35.0% |
| GAAGAATTAGGATAGTTTGG+AGG | + | chr4_3:24784781-24784800 | None:intergenic | 35.0% | |
| GGAGAAGAATTAGGATAGTT+TGG | + | chr4_3:24784784-24784803 | None:intergenic | 35.0% | |
| GGATTCAACTGGTATGAATA+TGG | + | chr4_3:24784806-24784825 | None:intergenic | 35.0% | |
| TATTCATACCAGTTGAATCC+CGG | - | chr4_3:24784806-24784825 | Msa0635610:intron | 35.0% | |
| AAATGTTCCATTATCTCACC+GGG | + | chr4_3:24784827-24784846 | None:intergenic | 35.0% | |
| CGCAGCAAAATTTAAAGGTA+AGG | + | chr4_3:24784986-24785005 | None:intergenic | 35.0% | |
| ATATACGTTATGGCAGTAAG+GGG | - | chr4_3:24785032-24785051 | Msa0635610:intron | 35.0% | |
| TCTGAGTATGCACAACAATT+TGG | - | chr4_3:24785175-24785194 | Msa0635610:intron | 35.0% | |
| TGAAGCAAGTACTTCAAAGA+CGG | + | chr4_3:24783473-24783492 | None:intergenic | 35.0% | |
| ! | CAATAACCGATCTGATGTTT+TGG | - | chr4_3:24783776-24783795 | Msa0635610:intron | 35.0% |
| CAAAGACCAAAACATCAGAT+CGG | + | chr4_3:24783785-24783804 | None:intergenic | 35.0% | |
| GATATAGAGTTTGTGTACTG+TGG | - | chr4_3:24783810-24783829 | Msa0635610:intron | 35.0% | |
| !!! | CTGTTTTTAGGACTTTGCTA+TGG | + | chr4_3:24784196-24784215 | None:intergenic | 35.0% |
| CATAGCAAAGTCCTAAAAAC+AGG | - | chr4_3:24784194-24784213 | Msa0635610:intron | 35.0% | |
| ! | CAAAATCCTGCGATTTTGAA+CGG | + | chr4_3:24784265-24784284 | None:intergenic | 35.0% |
| ! | TCAAAATCGCAGGATTTTGA+TGG | - | chr4_3:24784266-24784285 | Msa0635610:intron | 35.0% |
| !!! | TAAGGGTCAATTTTTTGACC+CGG | - | chr4_3:24784317-24784336 | Msa0635610:intron | 35.0% |
| !! | ATCGGGTAATGGATTCAAAT+CGG | + | chr4_3:24784356-24784375 | None:intergenic | 35.0% |
| GTATTCATAGAATCGGGTAA+TGG | + | chr4_3:24784367-24784386 | None:intergenic | 35.0% | |
| CGATTCTATGAATACCCTAA+AGG | - | chr4_3:24784372-24784391 | Msa0635610:intron | 35.0% | |
| ! | AAAGAATGAAGGAAAGTGTG+GGG | + | chr4_3:24784423-24784442 | None:intergenic | 35.0% |
| ! | CAAAGAATGAAGGAAAGTGT+GGG | + | chr4_3:24784424-24784443 | None:intergenic | 35.0% |
| ACAAAGAATGAAGGAAAGTG+TGG | + | chr4_3:24784425-24784444 | None:intergenic | 35.0% | |
| ! | GACTTTTGTAGAATCGATAG+AGG | + | chr4_3:24784624-24784643 | None:intergenic | 35.0% |
| ! | AAATCGAGGGATTTTACTCA+AGG | + | chr4_3:24784646-24784665 | None:intergenic | 35.0% |
| GAAGAATTAGGATAGTTTGG+AGG | + | chr4_3:24784781-24784800 | None:intergenic | 35.0% | |
| GGAGAAGAATTAGGATAGTT+TGG | + | chr4_3:24784784-24784803 | None:intergenic | 35.0% | |
| GGATTCAACTGGTATGAATA+TGG | + | chr4_3:24784806-24784825 | None:intergenic | 35.0% | |
| TATTCATACCAGTTGAATCC+CGG | - | chr4_3:24784806-24784825 | Msa0635610:intron | 35.0% | |
| AAATGTTCCATTATCTCACC+GGG | + | chr4_3:24784827-24784846 | None:intergenic | 35.0% | |
| CGCAGCAAAATTTAAAGGTA+AGG | + | chr4_3:24784986-24785005 | None:intergenic | 35.0% | |
| ATATACGTTATGGCAGTAAG+GGG | - | chr4_3:24785032-24785051 | Msa0635610:intron | 35.0% | |
| TCTGAGTATGCACAACAATT+TGG | - | chr4_3:24785175-24785194 | Msa0635610:intron | 35.0% | |
| ! | TGCTACTGTCATTAACTTGG+TGG | - | chr4_3:24783576-24783595 | Msa0635610:intron | 40.0% |
| ! | GTCATTAACTTGGTGGCATT+TGG | - | chr4_3:24783583-24783602 | Msa0635610:intron | 40.0% |
| !!! | CGATCTGATGTTTTGGTCTT+TGG | - | chr4_3:24783783-24783802 | Msa0635610:intron | 40.0% |
| ! | GCAGATTAATCATGCCCTTT+TGG | - | chr4_3:24783832-24783851 | Msa0635610:intron | 40.0% |
| ! | GTCGCAAAAACCAGGATTTT+GGG | + | chr4_3:24784148-24784167 | None:intergenic | 40.0% |
| ! | AGTCGCAAAAACCAGGATTT+TGG | + | chr4_3:24784149-24784168 | None:intergenic | 40.0% |
| TATGCAAAGTCGCAAAAACC+AGG | + | chr4_3:24784156-24784175 | None:intergenic | 40.0% | |
| TGAAATCCGTTCAAAATCGC+AGG | - | chr4_3:24784256-24784275 | Msa0635610:intron | 40.0% | |
| AATCGGGTCAATTTACGAAC+CGG | + | chr4_3:24784339-24784358 | None:intergenic | 40.0% | |
| !! | TCGGGTAATGGATTCAAATC+GGG | + | chr4_3:24784355-24784374 | None:intergenic | 40.0% |
| ! | AAGAATGAAGGAAAGTGTGG+GGG | + | chr4_3:24784422-24784441 | None:intergenic | 40.0% |
| GACTTTACTTCAAGTCGAAG+GGG | + | chr4_3:24784703-24784722 | None:intergenic | 40.0% | |
| GGACTTTACTTCAAGTCGAA+GGG | + | chr4_3:24784704-24784723 | None:intergenic | 40.0% | |
| TGAATAGGTGACTGTAAGCA+AGG | + | chr4_3:24784739-24784758 | None:intergenic | 40.0% | |
| TTGTGTAGACTGCCACTATT+TGG | + | chr4_3:24784944-24784963 | None:intergenic | 40.0% | |
| GCTATATCCTTAAGGGACAT+AGG | + | chr4_3:24785121-24785140 | None:intergenic | 40.0% | |
| GAGTATGCACAACAATTTGG+TGG | - | chr4_3:24785178-24785197 | Msa0635610:intron | 40.0% | |
| ! | TATGCACAACAATTTGGTGG+AGG | - | chr4_3:24785181-24785200 | Msa0635610:intron | 40.0% |
| !! | GGAACATTCAGCTCTAAGTA+TGG | - | chr4_3:24785202-24785221 | Msa0635610:intron | 40.0% |
| !! | TCAGCTCTAAGTATGGAGAA+TGG | - | chr4_3:24785209-24785228 | Msa0635610:intron | 40.0% |
| ! | TGCTACTGTCATTAACTTGG+TGG | - | chr4_3:24783576-24783595 | Msa0635610:intron | 40.0% |
| ! | GTCATTAACTTGGTGGCATT+TGG | - | chr4_3:24783583-24783602 | Msa0635610:intron | 40.0% |
| !!! | CGATCTGATGTTTTGGTCTT+TGG | - | chr4_3:24783783-24783802 | Msa0635610:intron | 40.0% |
| ! | GCAGATTAATCATGCCCTTT+TGG | - | chr4_3:24783832-24783851 | Msa0635610:intron | 40.0% |
| ! | GTCGCAAAAACCAGGATTTT+GGG | + | chr4_3:24784148-24784167 | None:intergenic | 40.0% |
| ! | AGTCGCAAAAACCAGGATTT+TGG | + | chr4_3:24784149-24784168 | None:intergenic | 40.0% |
| TATGCAAAGTCGCAAAAACC+AGG | + | chr4_3:24784156-24784175 | None:intergenic | 40.0% | |
| TGAAATCCGTTCAAAATCGC+AGG | - | chr4_3:24784256-24784275 | Msa0635610:intron | 40.0% | |
| AATCGGGTCAATTTACGAAC+CGG | + | chr4_3:24784339-24784358 | None:intergenic | 40.0% | |
| !! | TCGGGTAATGGATTCAAATC+GGG | + | chr4_3:24784355-24784374 | None:intergenic | 40.0% |
| ! | AAGAATGAAGGAAAGTGTGG+GGG | + | chr4_3:24784422-24784441 | None:intergenic | 40.0% |
| GACTTTACTTCAAGTCGAAG+GGG | + | chr4_3:24784703-24784722 | None:intergenic | 40.0% | |
| GGACTTTACTTCAAGTCGAA+GGG | + | chr4_3:24784704-24784723 | None:intergenic | 40.0% | |
| TGAATAGGTGACTGTAAGCA+AGG | + | chr4_3:24784739-24784758 | None:intergenic | 40.0% | |
| TTGTGTAGACTGCCACTATT+TGG | + | chr4_3:24784944-24784963 | None:intergenic | 40.0% | |
| GCTATATCCTTAAGGGACAT+AGG | + | chr4_3:24785121-24785140 | None:intergenic | 40.0% | |
| GAGTATGCACAACAATTTGG+TGG | - | chr4_3:24785178-24785197 | Msa0635610:intron | 40.0% | |
| ! | TATGCACAACAATTTGGTGG+AGG | - | chr4_3:24785181-24785200 | Msa0635610:intron | 40.0% |
| !! | GGAACATTCAGCTCTAAGTA+TGG | - | chr4_3:24785202-24785221 | Msa0635610:intron | 40.0% |
| !! | TCAGCTCTAAGTATGGAGAA+TGG | - | chr4_3:24785209-24785228 | Msa0635610:intron | 40.0% |
| TTCAGTGAGTTCACCAACAG+TGG | + | chr4_3:24783322-24783341 | None:intergenic | 45.0% | |
| GTGAACTCACTGAAGCAATG+TGG | - | chr4_3:24783328-24783347 | Msa0635610:CDS | 45.0% | |
| TGAAGCAATGTGGCCAATAG+AGG | - | chr4_3:24783338-24783357 | Msa0635610:CDS | 45.0% | |
| GGACTTAAGTCCCAAAATCC+TGG | - | chr4_3:24784135-24784154 | Msa0635610:intron | 45.0% | |
| ATCGGGTCAATTTACGAACC+GGG | + | chr4_3:24784338-24784357 | None:intergenic | 45.0% | |
| TCGAAGGGGAGTAGCAAAAT+CGG | + | chr4_3:24784689-24784708 | None:intergenic | 45.0% | |
| GGGACTTTACTTCAAGTCGA+AGG | + | chr4_3:24784705-24784724 | None:intergenic | 45.0% | |
| TTATCTCACCGGGATTCAAC+TGG | + | chr4_3:24784817-24784836 | None:intergenic | 45.0% | |
| GTTGAATCCCGGTGAGATAA+TGG | - | chr4_3:24784817-24784836 | Msa0635610:intron | 45.0% | |
| TTATGGCAGTAAGGGGAATG+AGG | - | chr4_3:24785039-24785058 | Msa0635610:intron | 45.0% | |
| CTCACAACCTATGTCCCTTA+AGG | - | chr4_3:24785111-24785130 | Msa0635610:intron | 45.0% | |
| CTCTAAGTATGGAGAATGGC+AGG | - | chr4_3:24785213-24785232 | Msa0635610:intron | 45.0% | |
| AATGGCAGGAGTTCACATCT+TGG | - | chr4_3:24785227-24785246 | Msa0635610:intron | 45.0% | |
| ATGGCAGGAGTTCACATCTT+GGG | - | chr4_3:24785228-24785247 | Msa0635610:intron | 45.0% | |
| TTCAGTGAGTTCACCAACAG+TGG | + | chr4_3:24783322-24783341 | None:intergenic | 45.0% | |
| GTGAACTCACTGAAGCAATG+TGG | - | chr4_3:24783328-24783347 | Msa0635610:CDS | 45.0% | |
| TGAAGCAATGTGGCCAATAG+AGG | - | chr4_3:24783338-24783357 | Msa0635610:CDS | 45.0% | |
| GGACTTAAGTCCCAAAATCC+TGG | - | chr4_3:24784135-24784154 | Msa0635610:intron | 45.0% | |
| ATCGGGTCAATTTACGAACC+GGG | + | chr4_3:24784338-24784357 | None:intergenic | 45.0% | |
| TCGAAGGGGAGTAGCAAAAT+CGG | + | chr4_3:24784689-24784708 | None:intergenic | 45.0% | |
| GGGACTTTACTTCAAGTCGA+AGG | + | chr4_3:24784705-24784724 | None:intergenic | 45.0% | |
| TTATCTCACCGGGATTCAAC+TGG | + | chr4_3:24784817-24784836 | None:intergenic | 45.0% | |
| GTTGAATCCCGGTGAGATAA+TGG | - | chr4_3:24784817-24784836 | Msa0635610:intron | 45.0% | |
| TTATGGCAGTAAGGGGAATG+AGG | - | chr4_3:24785039-24785058 | Msa0635610:intron | 45.0% | |
| CTCACAACCTATGTCCCTTA+AGG | - | chr4_3:24785111-24785130 | Msa0635610:intron | 45.0% | |
| CTCTAAGTATGGAGAATGGC+AGG | - | chr4_3:24785213-24785232 | Msa0635610:intron | 45.0% | |
| AATGGCAGGAGTTCACATCT+TGG | - | chr4_3:24785227-24785246 | Msa0635610:intron | 45.0% | |
| ATGGCAGGAGTTCACATCTT+GGG | - | chr4_3:24785228-24785247 | Msa0635610:intron | 45.0% | |
| ! | TTCAACCCTTGTGCCACTGT+TGG | - | chr4_3:24783306-24783325 | Msa0635610:CDS | 50.0% |
| GTTCACCAACAGTGGCACAA+GGG | + | chr4_3:24783314-24783333 | None:intergenic | 50.0% | |
| AGTTCACCAACAGTGGCACA+AGG | + | chr4_3:24783315-24783334 | None:intergenic | 50.0% | |
| !! | AAAGACGGGCTGAGAGACAA+AGG | + | chr4_3:24783993-24784012 | None:intergenic | 50.0% |
| CGAAGGGGAGTAGCAAAATC+GGG | + | chr4_3:24784688-24784707 | None:intergenic | 50.0% | |
| ACTTGTGATCCTACTGCTCG+CGG | - | chr4_3:24785145-24785164 | Msa0635610:intron | 50.0% | |
| GAAATAACACCGCGAGCAGT+AGG | + | chr4_3:24785157-24785176 | None:intergenic | 50.0% | |
| ! | TTCAACCCTTGTGCCACTGT+TGG | - | chr4_3:24783306-24783325 | Msa0635610:CDS | 50.0% |
| GTTCACCAACAGTGGCACAA+GGG | + | chr4_3:24783314-24783333 | None:intergenic | 50.0% | |
| AGTTCACCAACAGTGGCACA+AGG | + | chr4_3:24783315-24783334 | None:intergenic | 50.0% | |
| !! | AAAGACGGGCTGAGAGACAA+AGG | + | chr4_3:24783993-24784012 | None:intergenic | 50.0% |
| CGAAGGGGAGTAGCAAAATC+GGG | + | chr4_3:24784688-24784707 | None:intergenic | 50.0% | |
| ACTTGTGATCCTACTGCTCG+CGG | - | chr4_3:24785145-24785164 | Msa0635610:intron | 50.0% | |
| GAAATAACACCGCGAGCAGT+AGG | + | chr4_3:24785157-24785176 | None:intergenic | 50.0% | |
| ! | TACAGCTGCTGCTGCTGACT+GGG | - | chr4_3:24783935-24783954 | Msa0635610:intron | 55.0% |
| ! | CTGCTGCTGACTGGGTTCAT+GGG | - | chr4_3:24783943-24783962 | Msa0635610:intron | 55.0% |
| AGCAAGCGCAGAGGCTGAAT+AGG | + | chr4_3:24784754-24784773 | None:intergenic | 55.0% | |
| TATTCAGCCTCTGCGCTTGC+TGG | - | chr4_3:24784753-24784772 | Msa0635610:intron | 55.0% | |
| ! | TACAGCTGCTGCTGCTGACT+GGG | - | chr4_3:24783935-24783954 | Msa0635610:intron | 55.0% |
| ! | CTGCTGCTGACTGGGTTCAT+GGG | - | chr4_3:24783943-24783962 | Msa0635610:intron | 55.0% |
| AGCAAGCGCAGAGGCTGAAT+AGG | + | chr4_3:24784754-24784773 | None:intergenic | 55.0% | |
| TATTCAGCCTCTGCGCTTGC+TGG | - | chr4_3:24784753-24784772 | Msa0635610:intron | 55.0% | |
| CTACAGCTGCTGCTGCTGAC+TGG | - | chr4_3:24783934-24783953 | Msa0635610:intron | 60.0% | |
| ! | GCTGCTGCTGACTGGGTTCA+TGG | - | chr4_3:24783942-24783961 | Msa0635610:intron | 60.0% |
| CTACAGCTGCTGCTGCTGAC+TGG | - | chr4_3:24783934-24783953 | Msa0635610:intron | 60.0% | |
| ! | GCTGCTGCTGACTGGGTTCA+TGG | - | chr4_3:24783942-24783961 | Msa0635610:intron | 60.0% |
| GGAGGAACCAGCAAGCGCAG+AGG | + | chr4_3:24784763-24784782 | None:intergenic | 65.0% | |
| GGAGGAACCAGCAAGCGCAG+AGG | + | chr4_3:24784763-24784782 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 24783289 | 24785270 | 24783289 | ID=Msa0635610;Name=Msa0635610 |
| chr4_3 | mRNA | 24783289 | 24785270 | 24783289 | ID=Msa0635610-mRNA-1;Parent=Msa0635610;Name=Msa0635610-mRNA-1;_AED=0.39;_eAED=0.46;_QI=0|0|0|1|1|1|2|0|75 |
| chr4_3 | exon | 24785266 | 24785270 | 24785266 | ID=Msa0635610-mRNA-1:exon:6257;Parent=Msa0635610-mRNA-1 |
| chr4_3 | exon | 24783289 | 24783511 | 24783289 | ID=Msa0635610-mRNA-1:exon:6256;Parent=Msa0635610-mRNA-1 |
| chr4_3 | CDS | 24785266 | 24785270 | 24785266 | ID=Msa0635610-mRNA-1:cds;Parent=Msa0635610-mRNA-1 |
| chr4_3 | CDS | 24783289 | 24783511 | 24783289 | ID=Msa0635610-mRNA-1:cds;Parent=Msa0635610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
