Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051790 | A0A396H3B6 | 61.538 | 156 | 59 | 1 | 74 | 229 | 5 | 159 | 7.43e-55 | 186 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004870 | Msa0051790 | 0.874097 | 8.813712e-68 | -8.615850e-47 |
| Msa0004880 | Msa0051790 | 0.974566 | 2.206945e-138 | -8.615850e-47 |
| Msa0017510 | Msa0051790 | 0.826549 | 2.552906e-54 | -8.615850e-47 |
| Msa0031340 | Msa0051790 | 0.812684 | 3.745402e-51 | -8.615850e-47 |
| Msa0045770 | Msa0051790 | 0.804712 | 1.893681e-49 | -8.615850e-47 |
| Msa0048000 | Msa0051790 | 0.829627 | 4.630407e-55 | -8.615850e-47 |
| Msa0051780 | Msa0051790 | 0.873489 | 1.413706e-67 | -8.615850e-47 |
| Msa0051790 | Msa0053780 | 0.812157 | 4.881731e-51 | -8.615850e-47 |
| Msa0051790 | Msa0057520 | 0.804533 | 2.064036e-49 | -8.615850e-47 |
| Msa0051790 | Msa0068680 | 0.806705 | 7.225654e-50 | -8.615850e-47 |
| Msa0051790 | Msa0078650 | 0.828104 | 1.082092e-54 | -8.615850e-47 |
| Msa0051790 | Msa0089360 | 0.821283 | 4.384122e-53 | -8.615850e-47 |
| Msa0051790 | Msa0112750 | 0.852630 | 4.068849e-61 | -8.615850e-47 |
| Msa0051790 | Msa0116080 | 0.812604 | 3.899933e-51 | -8.615850e-47 |
| Msa0051790 | Msa0120040 | -0.815369 | 9.578724e-52 | -8.615850e-47 |
| Msa0051790 | Msa0121620 | 0.803630 | 3.180314e-49 | -8.615850e-47 |
| Msa0051790 | Msa0122590 | 0.824381 | 8.325135e-54 | -8.615850e-47 |
| Msa0051790 | Msa0126370 | 0.838154 | 3.402762e-57 | -8.615850e-47 |
| Msa0051790 | Msa0133130 | 0.804382 | 2.219522e-49 | -8.615850e-47 |
| Msa0051790 | Msa0140780 | 0.812738 | 3.645175e-51 | -8.615850e-47 |
| Msa0051790 | Msa0148100 | 0.801050 | 1.081174e-48 | -8.615850e-47 |
| Msa0051790 | Msa0157100 | 0.801602 | 8.334694e-49 | -8.615850e-47 |
| Msa0051790 | Msa0157290 | 0.826237 | 3.029437e-54 | -8.615850e-47 |
| Msa0051790 | Msa0159770 | 0.802237 | 6.172474e-49 | -8.615850e-47 |
| Msa0051790 | Msa0166870 | 0.813537 | 2.435032e-51 | -8.615850e-47 |
| Msa0051790 | Msa0170570 | 0.807020 | 6.197172e-50 | -8.615850e-47 |
| Msa0051790 | Msa0173990 | 0.803493 | 3.395821e-49 | -8.615850e-47 |
| Msa0051790 | Msa0183050 | 0.801005 | 1.103975e-48 | -8.615850e-47 |
| Msa0051790 | Msa0188830 | 0.814206 | 1.733805e-51 | -8.615850e-47 |
| Msa0051790 | Msa0191040 | 0.841301 | 5.163822e-58 | -8.615850e-47 |
| Msa0051790 | Msa0197930 | 0.822059 | 2.900421e-53 | -8.615850e-47 |
| Msa0051790 | Msa0200260 | 0.820038 | 8.469341e-53 | -8.615850e-47 |
| Msa0051790 | Msa0205510 | 0.822690 | 2.070016e-53 | -8.615850e-47 |
| Msa0051790 | Msa0205850 | 0.820862 | 5.481979e-53 | -8.615850e-47 |
| Msa0051790 | Msa0213520 | 0.811763 | 5.949364e-51 | -8.615850e-47 |
| Msa0051790 | Msa0216240 | 0.841083 | 5.890632e-58 | -8.615850e-47 |
| Msa0051790 | Msa0220580 | 0.822894 | 1.855817e-53 | -8.615850e-47 |
| Msa0051790 | Msa0225600 | 0.819007 | 1.455659e-52 | -8.615850e-47 |
| Msa0051790 | Msa0227470 | 0.803788 | 2.948697e-49 | -8.615850e-47 |
| Msa0051790 | Msa0233340 | 0.841826 | 3.754031e-58 | -8.615850e-47 |
| Msa0051790 | Msa0243100 | 0.839265 | 1.756714e-57 | -8.615850e-47 |
| Msa0051790 | Msa0243710 | 0.804290 | 2.318859e-49 | -8.615850e-47 |
| Msa0051790 | Msa0244860 | 0.811453 | 6.949288e-51 | -8.615850e-47 |
| Msa0051790 | Msa0245940 | 0.801776 | 7.677483e-49 | -8.615850e-47 |
| Msa0051790 | Msa0249100 | 0.800686 | 1.283021e-48 | -8.615850e-47 |
| Msa0051790 | Msa0249200 | 0.803815 | 2.911017e-49 | -8.615850e-47 |
| Msa0051790 | Msa0250880 | 0.807848 | 4.135426e-50 | -8.615850e-47 |
| Msa0051790 | Msa0251240 | 0.817204 | 3.722937e-52 | -8.615850e-47 |
| Msa0051790 | Msa0258760 | 0.806340 | 8.624539e-50 | -8.615850e-47 |
| Msa0051790 | Msa0260810 | 0.830013 | 3.728999e-55 | -8.615850e-47 |
| Msa0051790 | Msa0262510 | 0.808526 | 2.965493e-50 | -8.615850e-47 |
| Msa0051790 | Msa0266450 | 0.833020 | 6.777056e-56 | -8.615850e-47 |
| Msa0051790 | Msa0276920 | 0.820669 | 6.069336e-53 | -8.615850e-47 |
| Msa0051790 | Msa0284520 | 0.801964 | 7.023073e-49 | -8.615850e-47 |
| Msa0051790 | Msa0287410 | 0.822837 | 1.913213e-53 | -8.615850e-47 |
| Msa0051790 | Msa0287650 | 0.833622 | 4.798058e-56 | -8.615850e-47 |
| Msa0051790 | Msa0290000 | 0.805294 | 1.430987e-49 | -8.615850e-47 |
| Msa0051790 | Msa0290010 | 0.813696 | 2.245542e-51 | -8.615850e-47 |
| Msa0051790 | Msa0305700 | 0.810446 | 1.148314e-50 | -8.615850e-47 |
| Msa0051790 | Msa0311690 | 0.836394 | 9.602286e-57 | -8.615850e-47 |
| Msa0051790 | Msa0311700 | 0.831214 | 1.895185e-55 | -8.615850e-47 |
| Msa0051790 | Msa0315530 | 0.802424 | 5.648571e-49 | -8.615850e-47 |
| Msa0051790 | Msa0322690 | 0.800695 | 1.277647e-48 | -8.615850e-47 |
| Msa0051790 | Msa0323180 | 0.809779 | 1.598157e-50 | -8.615850e-47 |
| Msa0051790 | Msa0333920 | 0.812651 | 3.808747e-51 | -8.615850e-47 |
| Msa0051790 | Msa0333930 | 0.807666 | 4.521063e-50 | -8.615850e-47 |
| Msa0051790 | Msa0334360 | 0.825673 | 4.123107e-54 | -8.615850e-47 |
| Msa0051790 | Msa0341540 | 0.805660 | 1.199335e-49 | -8.615850e-47 |
| Msa0051790 | Msa0369440 | 0.800133 | 1.662951e-48 | -8.615850e-47 |
| Msa0051790 | Msa0376350 | 0.807775 | 4.287329e-50 | -8.615850e-47 |
| Msa0051790 | Msa0379640 | 0.812693 | 3.729164e-51 | -8.615850e-47 |
| Msa0051790 | Msa0407780 | 0.823333 | 1.465842e-53 | -8.615850e-47 |
| Msa0051790 | Msa0407920 | 0.804919 | 1.714078e-49 | -8.615850e-47 |
| Msa0051790 | Msa0410650 | 0.802457 | 5.560379e-49 | -8.615850e-47 |
| Msa0051790 | Msa0425400 | 0.806381 | 8.457509e-50 | -8.615850e-47 |
| Msa0051790 | Msa0428930 | 0.817922 | 2.564153e-52 | -8.615850e-47 |
| Msa0051790 | Msa0433360 | 0.804242 | 2.373328e-49 | -8.615850e-47 |
| Msa0051790 | Msa0462390 | 0.814930 | 1.199046e-51 | -8.615850e-47 |
| Msa0051790 | Msa0462430 | 0.810366 | 1.194790e-50 | -8.615850e-47 |
| Msa0051790 | Msa0462480 | 0.808603 | 2.855437e-50 | -8.615850e-47 |
| Msa0051790 | Msa0484780 | 0.859513 | 3.926063e-63 | -8.615850e-47 |
| Msa0051790 | Msa0495320 | 0.807459 | 5.002147e-50 | -8.615850e-47 |
| Msa0051790 | Msa0507680 | 0.801645 | 8.163892e-49 | -8.615850e-47 |
| Msa0051790 | Msa0512890 | 0.838464 | 2.831372e-57 | -8.615850e-47 |
| Msa0051790 | Msa0512900 | 0.832776 | 7.795230e-56 | -8.615850e-47 |
| Msa0051790 | Msa0516170 | 0.819908 | 9.071566e-53 | -8.615850e-47 |
| Msa0051790 | Msa0523460 | 0.846789 | 1.741250e-59 | -8.615850e-47 |
| Msa0051790 | Msa0531430 | 0.811383 | 7.195072e-51 | -8.615850e-47 |
| Msa0051790 | Msa0534590 | 0.858267 | 9.264954e-63 | -8.615850e-47 |
| Msa0051790 | Msa0536220 | 0.804104 | 2.534958e-49 | -8.615850e-47 |
| Msa0051790 | Msa0545070 | 0.823352 | 1.451089e-53 | -8.615850e-47 |
| Msa0051790 | Msa0550430 | 0.809373 | 1.954006e-50 | -8.615850e-47 |
| Msa0051790 | Msa0551890 | 0.822041 | 2.928323e-53 | -8.615850e-47 |
| Msa0051790 | Msa0563840 | 0.807185 | 5.720088e-50 | -8.615850e-47 |
| Msa0051790 | Msa0577220 | 0.809987 | 1.441625e-50 | -8.615850e-47 |
| Msa0051790 | Msa0578970 | 0.800812 | 1.208892e-48 | -8.615850e-47 |
| Msa0051790 | Msa0579130 | 0.804058 | 2.591320e-49 | -8.615850e-47 |
| Msa0051790 | Msa0590800 | 0.826060 | 3.338043e-54 | -8.615850e-47 |
| Msa0051790 | Msa0607050 | 0.805356 | 1.388979e-49 | -8.615850e-47 |
| Msa0051790 | Msa0610590 | 0.804158 | 2.470332e-49 | -8.615850e-47 |
| Msa0051790 | Msa0611380 | 0.803434 | 3.492700e-49 | -8.615850e-47 |
| Msa0051790 | Msa0626090 | 0.806187 | 9.292447e-50 | -8.615850e-47 |
| Msa0051790 | Msa0631120 | 0.835608 | 1.520034e-56 | -8.615850e-47 |
| Msa0051790 | Msa0635610 | 0.802821 | 4.676634e-49 | -8.615850e-47 |
| Msa0051790 | Msa0644840 | 0.802957 | 4.383624e-49 | -8.615850e-47 |
| Msa0051790 | Msa0647980 | 0.810933 | 9.009255e-51 | -8.615850e-47 |
| Msa0051790 | Msa0657970 | 0.848851 | 4.710243e-60 | -8.615850e-47 |
| Msa0051790 | Msa0666030 | 0.827960 | 1.172192e-54 | -8.615850e-47 |
| Msa0051790 | Msa0667050 | 0.808888 | 2.482250e-50 | -8.615850e-47 |
| Msa0051790 | Msa0669340 | 0.816281 | 5.997108e-52 | -8.615850e-47 |
| Msa0051790 | Msa0682550 | 0.842338 | 2.748697e-58 | -8.615850e-47 |
| Msa0051790 | Msa0690150 | 0.806605 | 7.586098e-50 | -8.615850e-47 |
| Msa0051790 | Msa0692060 | 0.805959 | 1.037559e-49 | -8.615850e-47 |
| Msa0051790 | Msa0693380 | 0.822769 | 1.983941e-53 | -8.615850e-47 |
| Msa0051790 | Msa0696640 | 0.813370 | 2.649279e-51 | -8.615850e-47 |
| Msa0051790 | Msa0740510 | 0.801984 | 6.957671e-49 | -8.615850e-47 |
| Msa0051790 | Msa0740740 | 0.802066 | 6.692619e-49 | -8.615850e-47 |
| Msa0051790 | Msa0742380 | 0.819513 | 1.116807e-52 | -8.615850e-47 |
| Msa0051790 | Msa0756540 | 0.809763 | 1.611335e-50 | -8.615850e-47 |
| Msa0051790 | Msa0767220 | 0.830136 | 3.481373e-55 | -8.615850e-47 |
| Msa0051790 | Msa0793640 | 0.819104 | 1.383738e-52 | -8.615850e-47 |
| Msa0051790 | Msa0795080 | 0.810357 | 1.200108e-50 | -8.615850e-47 |
| Msa0051790 | Msa0820770 | 0.807141 | 5.842481e-50 | -8.615850e-47 |
| Msa0051790 | Msa0858840 | 0.802270 | 6.075326e-49 | -8.615850e-47 |
| Msa0051790 | Msa0861090 | 0.800554 | 1.364752e-48 | -8.615850e-47 |
| Msa0051790 | Msa0869100 | 0.807143 | 5.838384e-50 | -8.615850e-47 |
| Msa0051790 | Msa0879260 | 0.809747 | 1.624024e-50 | -8.615850e-47 |
| Msa0051790 | Msa0880140 | 0.825870 | 3.701815e-54 | -8.615850e-47 |
| Msa0051790 | Msa0908050 | 0.803356 | 3.625368e-49 | -8.615850e-47 |
| Msa0051790 | Msa0927280 | 0.809105 | 2.230670e-50 | -8.615850e-47 |
| Msa0051790 | Msa0927670 | 0.809516 | 1.820961e-50 | -8.615850e-47 |
| Msa0051790 | Msa0933230 | 0.852154 | 5.560022e-61 | -8.615850e-47 |
| Msa0051790 | Msa0933310 | 0.843749 | 1.157068e-58 | -8.615850e-47 |
| Msa0051790 | Msa0954130 | 0.806768 | 7.006058e-50 | -8.615850e-47 |
| Msa0051790 | Msa0954550 | 0.800704 | 1.271995e-48 | -8.615850e-47 |
| Msa0051790 | Msa0954920 | 0.814506 | 1.487980e-51 | -8.615850e-47 |
| Msa0051790 | Msa0957110 | 0.804513 | 2.083676e-49 | -8.615850e-47 |
| Msa0051790 | Msa0969520 | 0.802124 | 6.510110e-49 | -8.615850e-47 |
| Msa0051790 | Msa0971090 | 0.842400 | 2.645829e-58 | -8.615850e-47 |
| Msa0051790 | Msa0979510 | 0.821485 | 3.937940e-53 | -8.615850e-47 |
| Msa0051790 | Msa0990350 | 0.801905 | 7.220931e-49 | -8.615850e-47 |
| Msa0051790 | Msa0999040 | 0.809645 | 1.708201e-50 | -8.615850e-47 |
| Msa0051790 | Msa1010350 | 0.804843 | 1.778074e-49 | -8.615850e-47 |
| Msa0051790 | Msa1043390 | 0.809863 | 1.533634e-50 | -8.615850e-47 |
| Msa0051790 | Msa1043450 | 0.808749 | 2.658487e-50 | -8.615850e-47 |
| Msa0051790 | Msa1045200 | 0.802523 | 5.388379e-49 | -8.615850e-47 |
| Msa0051790 | Msa1080160 | 0.813950 | 1.974027e-51 | -8.615850e-47 |
| Msa0051790 | Msa1082500 | 0.862807 | 3.901923e-64 | -8.615850e-47 |
| Msa0051790 | Msa1085200 | 0.807774 | 4.288721e-50 | -8.615850e-47 |
| Msa0051790 | Msa1098400 | 0.831188 | 1.923422e-55 | -8.615850e-47 |
| Msa0051790 | Msa1098420 | 0.808973 | 2.380486e-50 | -8.615850e-47 |
| Msa0051790 | Msa1108160 | 0.802964 | 4.368965e-49 | -8.615850e-47 |
| Msa0051790 | Msa1111180 | 0.801689 | 7.996794e-49 | -8.615850e-47 |
| Msa0051790 | Msa1140690 | 0.802195 | 6.295602e-49 | -8.615850e-47 |
| Msa0051790 | Msa1151720 | 0.824665 | 7.138056e-54 | -8.615850e-47 |
| Msa0051790 | Msa1170730 | 0.804570 | 2.027749e-49 | -8.615850e-47 |
| Msa0051790 | Msa1172670 | 0.870893 | 1.033922e-66 | -8.615850e-47 |
| Msa0051790 | Msa1179460 | 0.829413 | 5.220905e-55 | -8.615850e-47 |
| Msa0051790 | Msa1193290 | 0.802333 | 5.897749e-49 | -8.615850e-47 |
| Msa0051790 | Msa1197590 | 0.811411 | 7.097599e-51 | -8.615850e-47 |
| Msa0051790 | Msa1205370 | 0.807323 | 5.345812e-50 | -8.615850e-47 |
| Msa0051790 | Msa1214880 | 0.824986 | 5.993813e-54 | -8.615850e-47 |
| Msa0051790 | Msa1214890 | 0.837796 | 4.206703e-57 | -8.615850e-47 |
| Msa0051790 | Msa1217940 | 0.805942 | 1.046386e-49 | -8.615850e-47 |
| Msa0051790 | Msa1218480 | 0.813011 | 3.176253e-51 | -8.615850e-47 |
| Msa0051790 | Msa1254700 | 0.808027 | 3.789404e-50 | -8.615850e-47 |
| Msa0051790 | Msa1267430 | 0.817764 | 2.784228e-52 | -8.615850e-47 |
| Msa0051790 | Msa1267960 | 0.834327 | 3.196328e-56 | -8.615850e-47 |
| Msa0051790 | Msa1283860 | 0.804729 | 1.878745e-49 | -8.615850e-47 |
| Msa0051790 | Msa1289280 | 0.806595 | 7.621305e-50 | -8.615850e-47 |
| Msa0051790 | Msa1291870 | 0.809160 | 2.171078e-50 | -8.615850e-47 |
| Msa0051790 | Msa1294480 | 0.820190 | 7.819936e-53 | -8.615850e-47 |
| Msa0051790 | Msa1297290 | 0.808670 | 2.762875e-50 | -8.615850e-47 |
| Msa0051790 | Msa1300870 | 0.835132 | 2.004501e-56 | -8.615850e-47 |
| Msa0051790 | Msa1305340 | 0.816068 | 6.689816e-52 | -8.615850e-47 |
| Msa0051790 | Msa1306840 | 0.800020 | 1.752984e-48 | -8.615850e-47 |
| Msa0051790 | Msa1314340 | 0.826993 | 1.999161e-54 | -8.615850e-47 |
| Msa0051790 | Msa1318990 | 0.808847 | 2.533044e-50 | -8.615850e-47 |
| Msa0051790 | Msa1320620 | 0.800239 | 1.582463e-48 | -8.615850e-47 |
| Msa0051790 | Msa1331910 | 0.841897 | 3.595849e-58 | -8.615850e-47 |
| Msa0051790 | Msa1331920 | 0.809634 | 1.717307e-50 | -8.615850e-47 |
| Msa0051790 | Msa1342900 | 0.830575 | 2.718495e-55 | -8.615850e-47 |
| Msa0051790 | Msa1343320 | 0.812493 | 4.123609e-51 | -8.615850e-47 |
| Msa0051790 | Msa1353470 | 0.815389 | 9.478562e-52 | -8.615850e-47 |
| Msa0051790 | Msa1353980 | 0.808884 | 2.487122e-50 | -8.615850e-47 |
| Msa0051790 | Msa1359040 | 0.800290 | 1.544982e-48 | -8.615850e-47 |
| Msa0051790 | Msa1371640 | 0.823512 | 1.331119e-53 | -8.615850e-47 |
| Msa0051790 | Msa1378490 | 0.806731 | 7.135534e-50 | -8.615850e-47 |
| Msa0051790 | Msa1385000 | 0.808410 | 3.139604e-50 | -8.615850e-47 |
| Msa0051790 | Msa1392260 | 0.814281 | 1.668952e-51 | -8.615850e-47 |
| Msa0051790 | Msa1397250 | 0.826792 | 2.232857e-54 | -8.615850e-47 |
| Msa0051790 | Msa1401150 | 0.808631 | 2.816946e-50 | -8.615850e-47 |
| Msa0051790 | Msa1402590 | 0.801999 | 6.905862e-49 | -8.615850e-47 |
| Msa0051790 | Msa1404540 | 0.818601 | 1.800128e-52 | -8.615850e-47 |
| Msa0051790 | Msa1409870 | 0.801605 | 8.323153e-49 | -8.615850e-47 |
| Msa0051790 | Msa1410210 | 0.810520 | 1.106659e-50 | -8.615850e-47 |
| Msa0051790 | Msa1411020 | 0.835857 | 1.314729e-56 | -8.615850e-47 |
| Msa0051790 | Msa1417200 | 0.814415 | 1.558373e-51 | -8.615850e-47 |
| Msa0051790 | Msa1420140 | 0.801061 | 1.075656e-48 | -8.615850e-47 |
| Msa0051790 | Msa1420490 | 0.815112 | 1.092329e-51 | -8.615850e-47 |
| Msa0051790 | Msa1423390 | 0.813235 | 2.836783e-51 | -8.615850e-47 |
| Msa0051790 | Msa1424290 | 0.834663 | 2.631016e-56 | -8.615850e-47 |
| Msa0051790 | Msa1424450 | 0.806630 | 7.494109e-50 | -8.615850e-47 |
| Msa0051790 | Msa1425100 | 0.833705 | 4.573043e-56 | -8.615850e-47 |
| Msa0051790 | Msa1429900 | 0.824582 | 7.466390e-54 | -8.615850e-47 |
| Msa0051790 | Msa1431060 | 0.802558 | 5.298875e-49 | -8.615850e-47 |
| Msa0051790 | Msa1434350 | 0.836239 | 1.051620e-56 | -8.615850e-47 |
| Msa0051790 | Msa1438250 | 0.806502 | 7.974194e-50 | -8.615850e-47 |
| Msa0051790 | Msa1439320 | 0.836775 | 7.680680e-57 | -8.615850e-47 |
| Msa0051790 | Msa1440370 | 0.810750 | 9.869863e-51 | -8.615850e-47 |
| Msa0051790 | Msa1440810 | 0.810794 | 9.656954e-51 | -8.615850e-47 |
| Msa0051790 | Msa1452120 | 0.802468 | 5.530198e-49 | -8.615850e-47 |
| Msa0051790 | Msa1452240 | 0.805963 | 1.035422e-49 | -8.615850e-47 |
| Msa0051790 | Msa1457430 | 0.818382 | 2.018690e-52 | -8.615850e-47 |
| Msa0051790 | Msa1460020 | 0.806896 | 6.582116e-50 | -8.615850e-47 |
| Msa0051790 | Msa1463670 | 0.812919 | 3.327718e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051790 | MtrunA17_Chr7g0233391 | 61.538 | 156 | 59 | 1 | 74 | 229 | 5 | 159 | 1.43e-58 | 186 |
| Msa0051790 | MtrunA17_Chr2g0307271 | 36.090 | 133 | 84 | 1 | 97 | 229 | 30 | 161 | 8.82e-23 | 94.7 |
| Msa0051790 | MtrunA17_Chr6g0470121 | 45.588 | 68 | 37 | 0 | 162 | 229 | 6 | 73 | 7.29e-14 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 69 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTGAATTCTGTGACAAAA+TGG | 0.160201 | 1_2:-5894066 | Msa0051790:CDS |
| TAAATGAAACGGTGTGTTTC+GGG | 0.194178 | 1_2:+5894120 | None:intergenic |
| ACACACCGTTTCATTTAGTT+TGG | 0.281527 | 1_2:-5894114 | Msa0051790:CDS |
| TTCCAACGGCAAGAAGAAAA+AGG | 0.297160 | 1_2:-5894408 | Msa0051790:CDS |
| AGAATAATTCTCATCTCATT+AGG | 0.304943 | 1_2:+5894380 | None:intergenic |
| TATGGGTATGGGCTTGGGTC+CGG | 0.320687 | 1_2:-5895156 | Msa0051790:CDS |
| ATAATTAAAGTGCGGGTAAT+GGG | 0.361451 | 1_2:-5894708 | Msa0051790:intron |
| ACGAGGGTACGGCTCGGGTA+TGG | 0.365460 | 1_2:-5894625 | Msa0051790:CDS |
| TGCCTCTAAAGCACGTGAAC+CGG | 0.378423 | 1_2:+5894289 | None:intergenic |
| CTAAATGAAACGGTGTGTTT+CGG | 0.388845 | 1_2:+5894119 | None:intergenic |
| GCCTCAAAATTATGATCAAC+AGG | 0.389515 | 1_2:-5893994 | Msa0051790:CDS |
| ATGGGTATGGGCTTGGGTCC+GGG | 0.390189 | 1_2:-5895155 | Msa0051790:intron |
| TATAATTAAAGTGCGGGTAA+TGG | 0.394354 | 1_2:-5894709 | Msa0051790:intron |
| TCCCGGTTCACGTGCTTTAG+AGG | 0.396139 | 1_2:-5894291 | Msa0051790:CDS |
| GCGGGTAATGGGTACGGGTA+TGG | 0.401804 | 1_2:-5894697 | Msa0051790:CDS |
| CGAGGGTACGGCTCGGGTAT+GGG | 0.410196 | 1_2:-5894624 | Msa0051790:CDS |
| ACTTAGGTGCCCATAGGGTA+TGG | 0.412980 | 1_2:-5894672 | Msa0051790:CDS |
| CACACCGTTTCATTTAGTTT+GGG | 0.415200 | 1_2:-5894113 | Msa0051790:CDS |
| TCACGTGCTTTAGAGGCATT+AGG | 0.428847 | 1_2:-5894284 | Msa0051790:CDS |
| TCTCTCGTAACCCGTATACT+AGG | 0.433113 | 1_2:-5894016 | Msa0051790:CDS |
| ACTGAATTCTGTGACAAAAT+GGG | 0.442579 | 1_2:-5894065 | Msa0051790:CDS |
| CGGGTAATGGGTACGGGTAT+GGG | 0.444205 | 1_2:-5894696 | Msa0051790:CDS |
| CACTACTTGGTAACATAGGC+TGG | 0.445999 | 1_2:-5894241 | Msa0051790:CDS |
| ACAGTGGAATTTCACTGTAT+AGG | 0.455928 | 1_2:-5894316 | Msa0051790:CDS |
| CTTAGGTGCCCATAGGGTAT+GGG | 0.461359 | 1_2:-5894671 | Msa0051790:CDS |
| GTGCCCTTCCCCATACCCTA+TGG | 0.462996 | 1_2:+5894662 | None:intergenic |
| ACTCATAAATTCAAGTGTAA+AGG | 0.470367 | 1_2:+5894181 | None:intergenic |
| GACAATATTATGACACTACT+TGG | 0.479931 | 1_2:-5894254 | Msa0051790:CDS |
| GGAAAGGCTGTTGATGTTGT+TGG | 0.485710 | 1_2:-5894434 | Msa0051790:CDS |
| AAAATGGGTTTCGCAAGCGC+GGG | 0.495539 | 1_2:-5894050 | Msa0051790:CDS |
| TACAAACACGGGTATGGGAA+AGG | 0.505091 | 1_2:-5894595 | Msa0051790:CDS |
| TAAAGTGCGGGTAATGGGTA+CGG | 0.505359 | 1_2:-5894703 | Msa0051790:intron |
| ACAAACACGGGTATGGGAAA+GGG | 0.511478 | 1_2:-5894594 | Msa0051790:CDS |
| GCCTCTAAAGCACGTGAACC+GGG | 0.511788 | 1_2:+5894290 | None:intergenic |
| CACCCACGAGGGTACGGCTC+GGG | 0.513251 | 1_2:-5894630 | Msa0051790:CDS |
| ATGGGTACTTAGGTGCCCAT+AGG | 0.514272 | 1_2:-5894678 | Msa0051790:CDS |
| TACTATAGTAACCTACCCAT+TGG | 0.517408 | 1_2:-5894571 | Msa0051790:CDS |
| GGGTACGGGTATGGGTACTT+AGG | 0.519732 | 1_2:-5894688 | Msa0051790:CDS |
| TGTTGTCACCCACGAGGGTA+CGG | 0.524718 | 1_2:-5894636 | Msa0051790:CDS |
| TGCCCATAGGGTATGGGGAA+GGG | 0.525559 | 1_2:-5894665 | Msa0051790:CDS |
| GTTACCCAAACTAAATGAAA+CGG | 0.527847 | 1_2:+5894109 | None:intergenic |
| TGCCCTTCCCCATACCCTAT+GGG | 0.537487 | 1_2:+5894663 | None:intergenic |
| ACTATAGTAACCTACCCATT+GGG | 0.537877 | 1_2:-5894570 | Msa0051790:CDS |
| TTCAAGTGTAAAGGTTTCGA+AGG | 0.538704 | 1_2:+5894190 | None:intergenic |
| ATTTCACTGTATAGGTATCC+CGG | 0.539186 | 1_2:-5894308 | Msa0051790:CDS |
| CAAAATGGGTTTCGCAAGCG+CGG | 0.540710 | 1_2:-5894051 | Msa0051790:CDS |
| TTAAATGCCACTCACATGTA+GGG | 0.547480 | 1_2:+5894534 | None:intergenic |
| GAACGCAATGGGTACCCAAT+GGG | 0.548318 | 1_2:+5894556 | None:intergenic |
| TGGGTACTTAGGTGCCCATA+GGG | 0.552204 | 1_2:-5894677 | Msa0051790:CDS |
| ATGACACTACTTGGTAACAT+AGG | 0.559966 | 1_2:-5894245 | Msa0051790:CDS |
| AAAGTGCGGGTAATGGGTAC+GGG | 0.561741 | 1_2:-5894702 | Msa0051790:intron |
| TCACATGTAGGGAACGCAAT+GGG | 0.563751 | 1_2:+5894545 | None:intergenic |
| AAGCCCATACCCATAAAAGC+GGG | 0.571085 | 1_2:+5895164 | None:intergenic |
| TCACCCACGAGGGTACGGCT+CGG | 0.574342 | 1_2:-5894631 | Msa0051790:CDS |
| GATGTTGTTGGCAGTTCCAA+CGG | 0.586138 | 1_2:-5894422 | Msa0051790:CDS |
| TTAGGTGCCCATAGGGTATG+GGG | 0.593208 | 1_2:-5894670 | Msa0051790:CDS |
| ACTTCACATCTGAAAAGAAG+AGG | 0.601375 | 1_2:-5894355 | Msa0051790:CDS |
| GGAACGCAATGGGTACCCAA+TGG | 0.605190 | 1_2:+5894555 | None:intergenic |
| GTGCCCATAGGGTATGGGGA+AGG | 0.613951 | 1_2:-5894666 | Msa0051790:CDS |
| ATACCCGAGCCGTACCCTCG+TGG | 0.622621 | 1_2:+5894627 | None:intergenic |
| TACCCGAGCCGTACCCTCGT+GGG | 0.625589 | 1_2:+5894628 | None:intergenic |
| AAATGGGTTTCGCAAGCGCG+GGG | 0.643677 | 1_2:-5894049 | Msa0051790:CDS |
| CACTAATGTTGTCACCCACG+AGG | 0.645982 | 1_2:-5894642 | Msa0051790:CDS |
| CTCACATGTAGGGAACGCAA+TGG | 0.656100 | 1_2:+5894544 | None:intergenic |
| CAAGCCCATACCCATAAAAG+CGG | 0.662575 | 1_2:+5895163 | None:intergenic |
| TGAAACGGTGTGTTTCGGGT+CGG | 0.662897 | 1_2:+5894124 | None:intergenic |
| GCAATGGGTACCCAATGGGT+AGG | 0.662905 | 1_2:+5894560 | None:intergenic |
| AGCCCATACCCATAAAAGCG+GGG | 0.694057 | 1_2:+5895165 | None:intergenic |
| ACTAATGTTGTCACCCACGA+GGG | 0.717441 | 1_2:-5894641 | Msa0051790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTTTATTTTAATTTTAG+AGG | - | chr1_2:5894316-5894335 | Msa0051790:CDS | 10.0% |
| !!! | TATTTTGGATTTTTTTTATT+TGG | - | chr1_2:5894341-5894360 | Msa0051790:CDS | 10.0% |
| !!! | TGTTTTTATTTTAATTTTAG+AGG | - | chr1_2:5894316-5894335 | Msa0051790:CDS | 10.0% |
| !!! | TATTTTGGATTTTTTTTATT+TGG | - | chr1_2:5894341-5894360 | Msa0051790:CDS | 10.0% |
| !! | TTATATAAATATGTATATGC+AGG | + | chr1_2:5894102-5894121 | None:intergenic | 15.0% |
| !!! | TTAATTTTAGAGGAATATTT+TGG | - | chr1_2:5894326-5894345 | Msa0051790:CDS | 15.0% |
| !!! | TTGTTTTATTTCAATTGTAA+TGG | - | chr1_2:5894418-5894437 | Msa0051790:CDS | 15.0% |
| !!! | ATTTAAGATTGATTTATAAC+TGG | - | chr1_2:5894649-5894668 | Msa0051790:CDS | 15.0% |
| !! | TTATATAAATATGTATATGC+AGG | + | chr1_2:5894102-5894121 | None:intergenic | 15.0% |
| !!! | TTAATTTTAGAGGAATATTT+TGG | - | chr1_2:5894326-5894345 | Msa0051790:CDS | 15.0% |
| !!! | TTGTTTTATTTCAATTGTAA+TGG | - | chr1_2:5894418-5894437 | Msa0051790:CDS | 15.0% |
| !!! | ATTTAAGATTGATTTATAAC+TGG | - | chr1_2:5894649-5894668 | Msa0051790:CDS | 15.0% |
| !! | GCTAAATCTAAAAACTAATA+CGG | - | chr1_2:5894188-5894207 | Msa0051790:CDS | 20.0% |
| !!! | GTCTTTTTATAATTAAAGTG+CGG | - | chr1_2:5894450-5894469 | Msa0051790:intron | 20.0% |
| !!! | TCTTTTTATAATTAAAGTGC+GGG | - | chr1_2:5894451-5894470 | Msa0051790:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTTGCGAC+AGG | - | chr1_2:5894680-5894699 | Msa0051790:CDS | 20.0% |
| !! | GCTAAATCTAAAAACTAATA+CGG | - | chr1_2:5894188-5894207 | Msa0051790:CDS | 20.0% |
| !!! | GTCTTTTTATAATTAAAGTG+CGG | - | chr1_2:5894450-5894469 | Msa0051790:intron | 20.0% |
| !!! | TCTTTTTATAATTAAAGTGC+GGG | - | chr1_2:5894451-5894470 | Msa0051790:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTTGCGAC+AGG | - | chr1_2:5894680-5894699 | Msa0051790:CDS | 20.0% |
| !!! | CGAGTTGCTTTAAAAAAAAT+TGG | - | chr1_2:5894391-5894410 | Msa0051790:CDS | 25.0% |
| !!! | ATTTTGACAAATTGCTTCTA+AGG | - | chr1_2:5894710-5894729 | Msa0051790:intron | 25.0% |
| !! | TTTTGACAAATTGCTTCTAA+GGG | - | chr1_2:5894711-5894730 | Msa0051790:intron | 25.0% |
| ! | AGAATAATTCTCATCTCATT+AGG | + | chr1_2:5894789-5894808 | None:intergenic | 25.0% |
| ! | ACTCATAAATTCAAGTGTAA+AGG | + | chr1_2:5894988-5895007 | None:intergenic | 25.0% |
| !!! | CGAGTTGCTTTAAAAAAAAT+TGG | - | chr1_2:5894391-5894410 | Msa0051790:CDS | 25.0% |
| !!! | ATTTTGACAAATTGCTTCTA+AGG | - | chr1_2:5894710-5894729 | Msa0051790:intron | 25.0% |
| !! | TTTTGACAAATTGCTTCTAA+GGG | - | chr1_2:5894711-5894730 | Msa0051790:intron | 25.0% |
| ! | AGAATAATTCTCATCTCATT+AGG | + | chr1_2:5894789-5894808 | None:intergenic | 25.0% |
| ! | ACTCATAAATTCAAGTGTAA+AGG | + | chr1_2:5894988-5895007 | None:intergenic | 25.0% |
| TAATTACCCGCAAATTTAGA+TGG | - | chr1_2:5894034-5894053 | Msa0051790:CDS | 30.0% | |
| AATTACCCGCAAATTTAGAT+GGG | - | chr1_2:5894035-5894054 | Msa0051790:CDS | 30.0% | |
| AAATATGTATATGCAGGTTG+CGG | + | chr1_2:5894096-5894115 | None:intergenic | 30.0% | |
| TATAATTAAAGTGCGGGTAA+TGG | - | chr1_2:5894457-5894476 | Msa0051790:intron | 30.0% | |
| ATAATTAAAGTGCGGGTAAT+GGG | - | chr1_2:5894458-5894477 | Msa0051790:intron | 30.0% | |
| ! | TATGGGCATTTTTACAAACA+CGG | - | chr1_2:5894559-5894578 | Msa0051790:CDS | 30.0% |
| ! | ATTTTTACAAACACGGGTAT+GGG | - | chr1_2:5894566-5894585 | Msa0051790:CDS | 30.0% |
| GACAATATTATGACACTACT+TGG | - | chr1_2:5894912-5894931 | Msa0051790:intron | 30.0% | |
| GTTACCCAAACTAAATGAAA+CGG | + | chr1_2:5895060-5895079 | None:intergenic | 30.0% | |
| TACTGAATTCTGTGACAAAA+TGG | - | chr1_2:5895100-5895119 | Msa0051790:intron | 30.0% | |
| ACTGAATTCTGTGACAAAAT+GGG | - | chr1_2:5895101-5895120 | Msa0051790:intron | 30.0% | |
| !!! | TAATTTTGAGGCCTAGTATA+CGG | + | chr1_2:5895164-5895183 | None:intergenic | 30.0% |
| ! | TCCTGTTGATCATAATTTTG+AGG | + | chr1_2:5895176-5895195 | None:intergenic | 30.0% |
| TAATTACCCGCAAATTTAGA+TGG | - | chr1_2:5894034-5894053 | Msa0051790:CDS | 30.0% | |
| AATTACCCGCAAATTTAGAT+GGG | - | chr1_2:5894035-5894054 | Msa0051790:CDS | 30.0% | |
| AAATATGTATATGCAGGTTG+CGG | + | chr1_2:5894096-5894115 | None:intergenic | 30.0% | |
| TATAATTAAAGTGCGGGTAA+TGG | - | chr1_2:5894457-5894476 | Msa0051790:intron | 30.0% | |
| ATAATTAAAGTGCGGGTAAT+GGG | - | chr1_2:5894458-5894477 | Msa0051790:intron | 30.0% | |
| ! | TATGGGCATTTTTACAAACA+CGG | - | chr1_2:5894559-5894578 | Msa0051790:CDS | 30.0% |
| ! | ATTTTTACAAACACGGGTAT+GGG | - | chr1_2:5894566-5894585 | Msa0051790:CDS | 30.0% |
| GACAATATTATGACACTACT+TGG | - | chr1_2:5894912-5894931 | Msa0051790:intron | 30.0% | |
| GTTACCCAAACTAAATGAAA+CGG | + | chr1_2:5895060-5895079 | None:intergenic | 30.0% | |
| TACTGAATTCTGTGACAAAA+TGG | - | chr1_2:5895100-5895119 | Msa0051790:intron | 30.0% | |
| ACTGAATTCTGTGACAAAAT+GGG | - | chr1_2:5895101-5895120 | Msa0051790:intron | 30.0% | |
| !!! | TAATTTTGAGGCCTAGTATA+CGG | + | chr1_2:5895164-5895183 | None:intergenic | 30.0% |
| ! | TCCTGTTGATCATAATTTTG+AGG | + | chr1_2:5895176-5895195 | None:intergenic | 30.0% |
| TAAATTTGCGGGTAATTACC+CGG | + | chr1_2:5894032-5894051 | None:intergenic | 35.0% | |
| ACCATACCCATCTAAATTTG+CGG | + | chr1_2:5894044-5894063 | None:intergenic | 35.0% | |
| AATTTAGATGGGTATGGTTG+TGG | - | chr1_2:5894046-5894065 | Msa0051790:CDS | 35.0% | |
| ATTTAGATGGGTATGGTTGT+GGG | - | chr1_2:5894047-5894066 | Msa0051790:CDS | 35.0% | |
| AATATGTATATGCAGGTTGC+GGG | + | chr1_2:5894095-5894114 | None:intergenic | 35.0% | |
| CTCGTGAGCTTATGAATATA+AGG | + | chr1_2:5894226-5894245 | None:intergenic | 35.0% | |
| ! | ATGGGCATTTTTACAAACAC+GGG | - | chr1_2:5894560-5894579 | Msa0051790:CDS | 35.0% |
| ! | CATTTTTACAAACACGGGTA+TGG | - | chr1_2:5894565-5894584 | Msa0051790:CDS | 35.0% |
| TACTATAGTAACCTACCCAT+TGG | - | chr1_2:5894595-5894614 | Msa0051790:CDS | 35.0% | |
| ACTATAGTAACCTACCCATT+GGG | - | chr1_2:5894596-5894615 | Msa0051790:CDS | 35.0% | |
| TTAAATGCCACTCACATGTA+GGG | + | chr1_2:5894635-5894654 | None:intergenic | 35.0% | |
| ! | ACAAATTGCTTCTAAGGGAA+AGG | - | chr1_2:5894716-5894735 | Msa0051790:intron | 35.0% |
| ACTTCACATCTGAAAAGAAG+AGG | - | chr1_2:5894811-5894830 | Msa0051790:intron | 35.0% | |
| ! | TACAACAAGCTTTTGAACAG+TGG | - | chr1_2:5894834-5894853 | Msa0051790:intron | 35.0% |
| ACAGTGGAATTTCACTGTAT+AGG | - | chr1_2:5894850-5894869 | Msa0051790:intron | 35.0% | |
| ATTTCACTGTATAGGTATCC+CGG | - | chr1_2:5894858-5894877 | Msa0051790:intron | 35.0% | |
| ! | ATGACACTACTTGGTAACAT+AGG | - | chr1_2:5894921-5894940 | Msa0051790:intron | 35.0% |
| ! | ATAGGCTGGAATGATTTTGT+AGG | - | chr1_2:5894939-5894958 | Msa0051790:intron | 35.0% |
| TTCAAGTGTAAAGGTTTCGA+AGG | + | chr1_2:5894979-5894998 | None:intergenic | 35.0% | |
| TAAATGAAACGGTGTGTTTC+GGG | + | chr1_2:5895049-5895068 | None:intergenic | 35.0% | |
| CTAAATGAAACGGTGTGTTT+CGG | + | chr1_2:5895050-5895069 | None:intergenic | 35.0% | |
| ACACACCGTTTCATTTAGTT+TGG | - | chr1_2:5895052-5895071 | Msa0051790:intron | 35.0% | |
| ! | CACACCGTTTCATTTAGTTT+GGG | - | chr1_2:5895053-5895072 | Msa0051790:intron | 35.0% |
| !!! | AATTTTGAGGCCTAGTATAC+GGG | + | chr1_2:5895163-5895182 | None:intergenic | 35.0% |
| GCCTCAAAATTATGATCAAC+AGG | - | chr1_2:5895172-5895191 | Msa0051790:CDS | 35.0% | |
| TAAATTTGCGGGTAATTACC+CGG | + | chr1_2:5894032-5894051 | None:intergenic | 35.0% | |
| ACCATACCCATCTAAATTTG+CGG | + | chr1_2:5894044-5894063 | None:intergenic | 35.0% | |
| AATTTAGATGGGTATGGTTG+TGG | - | chr1_2:5894046-5894065 | Msa0051790:CDS | 35.0% | |
| ATTTAGATGGGTATGGTTGT+GGG | - | chr1_2:5894047-5894066 | Msa0051790:CDS | 35.0% | |
| AATATGTATATGCAGGTTGC+GGG | + | chr1_2:5894095-5894114 | None:intergenic | 35.0% | |
| CTCGTGAGCTTATGAATATA+AGG | + | chr1_2:5894226-5894245 | None:intergenic | 35.0% | |
| ! | ATGGGCATTTTTACAAACAC+GGG | - | chr1_2:5894560-5894579 | Msa0051790:CDS | 35.0% |
| ! | CATTTTTACAAACACGGGTA+TGG | - | chr1_2:5894565-5894584 | Msa0051790:CDS | 35.0% |
| TACTATAGTAACCTACCCAT+TGG | - | chr1_2:5894595-5894614 | Msa0051790:CDS | 35.0% | |
| ACTATAGTAACCTACCCATT+GGG | - | chr1_2:5894596-5894615 | Msa0051790:CDS | 35.0% | |
| TTAAATGCCACTCACATGTA+GGG | + | chr1_2:5894635-5894654 | None:intergenic | 35.0% | |
| ! | ACAAATTGCTTCTAAGGGAA+AGG | - | chr1_2:5894716-5894735 | Msa0051790:intron | 35.0% |
| ACTTCACATCTGAAAAGAAG+AGG | - | chr1_2:5894811-5894830 | Msa0051790:intron | 35.0% | |
| ! | TACAACAAGCTTTTGAACAG+TGG | - | chr1_2:5894834-5894853 | Msa0051790:intron | 35.0% |
| ACAGTGGAATTTCACTGTAT+AGG | - | chr1_2:5894850-5894869 | Msa0051790:intron | 35.0% | |
| ATTTCACTGTATAGGTATCC+CGG | - | chr1_2:5894858-5894877 | Msa0051790:intron | 35.0% | |
| ! | ATGACACTACTTGGTAACAT+AGG | - | chr1_2:5894921-5894940 | Msa0051790:intron | 35.0% |
| ! | ATAGGCTGGAATGATTTTGT+AGG | - | chr1_2:5894939-5894958 | Msa0051790:intron | 35.0% |
| TTCAAGTGTAAAGGTTTCGA+AGG | + | chr1_2:5894979-5894998 | None:intergenic | 35.0% | |
| TAAATGAAACGGTGTGTTTC+GGG | + | chr1_2:5895049-5895068 | None:intergenic | 35.0% | |
| CTAAATGAAACGGTGTGTTT+CGG | + | chr1_2:5895050-5895069 | None:intergenic | 35.0% | |
| ACACACCGTTTCATTTAGTT+TGG | - | chr1_2:5895052-5895071 | Msa0051790:intron | 35.0% | |
| ! | CACACCGTTTCATTTAGTTT+GGG | - | chr1_2:5895053-5895072 | Msa0051790:intron | 35.0% |
| !!! | AATTTTGAGGCCTAGTATAC+GGG | + | chr1_2:5895163-5895182 | None:intergenic | 35.0% |
| GCCTCAAAATTATGATCAAC+AGG | - | chr1_2:5895172-5895191 | Msa0051790:CDS | 35.0% | |
| CCATACCCATCTAAATTTGC+GGG | + | chr1_2:5894043-5894062 | None:intergenic | 40.0% | |
| ATATGTATATGCAGGTTGCG+GGG | + | chr1_2:5894094-5894113 | None:intergenic | 40.0% | |
| CTTAAATGCCACTCACATGT+AGG | + | chr1_2:5894636-5894655 | None:intergenic | 40.0% | |
| TTCCAACGGCAAGAAGAAAA+AGG | - | chr1_2:5894758-5894777 | Msa0051790:intron | 40.0% | |
| TCCAACGGCAAGAAGAAAAA+GGG | - | chr1_2:5894759-5894778 | Msa0051790:intron | 40.0% | |
| CCATACCCATCTAAATTTGC+GGG | + | chr1_2:5894043-5894062 | None:intergenic | 40.0% | |
| ATATGTATATGCAGGTTGCG+GGG | + | chr1_2:5894094-5894113 | None:intergenic | 40.0% | |
| CTTAAATGCCACTCACATGT+AGG | + | chr1_2:5894636-5894655 | None:intergenic | 40.0% | |
| TTCCAACGGCAAGAAGAAAA+AGG | - | chr1_2:5894758-5894777 | Msa0051790:intron | 40.0% | |
| TCCAACGGCAAGAAGAAAAA+GGG | - | chr1_2:5894759-5894778 | Msa0051790:intron | 40.0% | |
| !! | AAACCCCGCTTTTATGGGTA+TGG | - | chr1_2:5893998-5894017 | Msa0051790:CDS | 45.0% |
| !! | AACCCCGCTTTTATGGGTAT+GGG | - | chr1_2:5893999-5894018 | Msa0051790:CDS | 45.0% |
| AAGCCCATACCCATAAAAGC+GGG | + | chr1_2:5894005-5894024 | None:intergenic | 45.0% | |
| CAAGCCCATACCCATAAAAG+CGG | + | chr1_2:5894006-5894025 | None:intergenic | 45.0% | |
| ! | GCTTTTATGGGTATGGGCTT+GGG | - | chr1_2:5894005-5894024 | Msa0051790:CDS | 45.0% |
| CCCGCAAATTTAGATGGGTA+TGG | - | chr1_2:5894040-5894059 | Msa0051790:CDS | 45.0% | |
| ATGGGTATGGTTGTGGGTAA+GGG | - | chr1_2:5894053-5894072 | Msa0051790:CDS | 45.0% | |
| !! | TAAAGTGCGGGTAATGGGTA+CGG | - | chr1_2:5894463-5894482 | Msa0051790:intron | 45.0% |
| ACTAATGTTGTCACCCACGA+GGG | - | chr1_2:5894525-5894544 | Msa0051790:intron | 45.0% | |
| TACAAACACGGGTATGGGAA+AGG | - | chr1_2:5894571-5894590 | Msa0051790:CDS | 45.0% | |
| ACAAACACGGGTATGGGAAA+GGG | - | chr1_2:5894572-5894591 | Msa0051790:CDS | 45.0% | |
| TCACATGTAGGGAACGCAAT+GGG | + | chr1_2:5894624-5894643 | None:intergenic | 45.0% | |
| GGAAAGGCTGTTGATGTTGT+TGG | - | chr1_2:5894732-5894751 | Msa0051790:intron | 45.0% | |
| GATGTTGTTGGCAGTTCCAA+CGG | - | chr1_2:5894744-5894763 | Msa0051790:intron | 45.0% | |
| ! | ACCCTTTTTCTTCTTGCCGT+TGG | + | chr1_2:5894763-5894782 | None:intergenic | 45.0% |
| !! | TCACGTGCTTTAGAGGCATT+AGG | - | chr1_2:5894882-5894901 | Msa0051790:intron | 45.0% |
| ! | CACTACTTGGTAACATAGGC+TGG | - | chr1_2:5894925-5894944 | Msa0051790:intron | 45.0% |
| TCTCTCGTAACCCGTATACT+AGG | - | chr1_2:5895150-5895169 | Msa0051790:intron | 45.0% | |
| !! | AAACCCCGCTTTTATGGGTA+TGG | - | chr1_2:5893998-5894017 | Msa0051790:CDS | 45.0% |
| !! | AACCCCGCTTTTATGGGTAT+GGG | - | chr1_2:5893999-5894018 | Msa0051790:CDS | 45.0% |
| AAGCCCATACCCATAAAAGC+GGG | + | chr1_2:5894005-5894024 | None:intergenic | 45.0% | |
| CAAGCCCATACCCATAAAAG+CGG | + | chr1_2:5894006-5894025 | None:intergenic | 45.0% | |
| ! | GCTTTTATGGGTATGGGCTT+GGG | - | chr1_2:5894005-5894024 | Msa0051790:CDS | 45.0% |
| CCCGCAAATTTAGATGGGTA+TGG | - | chr1_2:5894040-5894059 | Msa0051790:CDS | 45.0% | |
| ATGGGTATGGTTGTGGGTAA+GGG | - | chr1_2:5894053-5894072 | Msa0051790:CDS | 45.0% | |
| !! | TAAAGTGCGGGTAATGGGTA+CGG | - | chr1_2:5894463-5894482 | Msa0051790:intron | 45.0% |
| ACTAATGTTGTCACCCACGA+GGG | - | chr1_2:5894525-5894544 | Msa0051790:intron | 45.0% | |
| TACAAACACGGGTATGGGAA+AGG | - | chr1_2:5894571-5894590 | Msa0051790:CDS | 45.0% | |
| ACAAACACGGGTATGGGAAA+GGG | - | chr1_2:5894572-5894591 | Msa0051790:CDS | 45.0% | |
| TCACATGTAGGGAACGCAAT+GGG | + | chr1_2:5894624-5894643 | None:intergenic | 45.0% | |
| GGAAAGGCTGTTGATGTTGT+TGG | - | chr1_2:5894732-5894751 | Msa0051790:intron | 45.0% | |
| GATGTTGTTGGCAGTTCCAA+CGG | - | chr1_2:5894744-5894763 | Msa0051790:intron | 45.0% | |
| ! | ACCCTTTTTCTTCTTGCCGT+TGG | + | chr1_2:5894763-5894782 | None:intergenic | 45.0% |
| !! | TCACGTGCTTTAGAGGCATT+AGG | - | chr1_2:5894882-5894901 | Msa0051790:intron | 45.0% |
| ! | CACTACTTGGTAACATAGGC+TGG | - | chr1_2:5894925-5894944 | Msa0051790:intron | 45.0% |
| TCTCTCGTAACCCGTATACT+AGG | - | chr1_2:5895150-5895169 | Msa0051790:intron | 45.0% | |
| !!! | ATAAATATTGTATTTAATTT+TGG | - | chr1_2:5894126-5894145 | Msa0051790:CDS | 5.0% |
| !!! | ATAAATATTGTATTTAATTT+TGG | - | chr1_2:5894126-5894145 | Msa0051790:CDS | 5.0% |
| !! | AGGGTGAAACCCCGCTTTTA+TGG | - | chr1_2:5893992-5894011 | Msa0051790:CDS | 50.0% |
| !! | GGGTGAAACCCCGCTTTTAT+GGG | - | chr1_2:5893993-5894012 | Msa0051790:CDS | 50.0% |
| AGCCCATACCCATAAAAGCG+GGG | + | chr1_2:5894004-5894023 | None:intergenic | 50.0% | |
| ! | CGCTTTTATGGGTATGGGCT+TGG | - | chr1_2:5894004-5894023 | Msa0051790:CDS | 50.0% |
| GATGGGTATGGTTGTGGGTA+AGG | - | chr1_2:5894052-5894071 | Msa0051790:CDS | 50.0% | |
| !! | GGTAAGGGCACTATACTACC+CGG | - | chr1_2:5894068-5894087 | Msa0051790:CDS | 50.0% |
| !! | AAAGTGCGGGTAATGGGTAC+GGG | - | chr1_2:5894464-5894483 | Msa0051790:intron | 50.0% |
| ATGGGTACTTAGGTGCCCAT+AGG | - | chr1_2:5894488-5894507 | Msa0051790:intron | 50.0% | |
| TGGGTACTTAGGTGCCCATA+GGG | - | chr1_2:5894489-5894508 | Msa0051790:intron | 50.0% | |
| ACTTAGGTGCCCATAGGGTA+TGG | - | chr1_2:5894494-5894513 | Msa0051790:intron | 50.0% | |
| CTTAGGTGCCCATAGGGTAT+GGG | - | chr1_2:5894495-5894514 | Msa0051790:intron | 50.0% | |
| TTAGGTGCCCATAGGGTATG+GGG | - | chr1_2:5894496-5894515 | Msa0051790:intron | 50.0% | |
| CACTAATGTTGTCACCCACG+AGG | - | chr1_2:5894524-5894543 | Msa0051790:intron | 50.0% | |
| GAACGCAATGGGTACCCAAT+GGG | + | chr1_2:5894613-5894632 | None:intergenic | 50.0% | |
| CTCACATGTAGGGAACGCAA+TGG | + | chr1_2:5894625-5894644 | None:intergenic | 50.0% | |
| TTGCGTTCCCTACATGTGAG+TGG | - | chr1_2:5894625-5894644 | Msa0051790:CDS | 50.0% | |
| !! | TGCCTCTAAAGCACGTGAAC+CGG | + | chr1_2:5894880-5894899 | None:intergenic | 50.0% |
| ! | TGAAACGGTGTGTTTCGGGT+CGG | + | chr1_2:5895045-5895064 | None:intergenic | 50.0% |
| ! | CAAAATGGGTTTCGCAAGCG+CGG | - | chr1_2:5895115-5895134 | Msa0051790:intron | 50.0% |
| ! | AAAATGGGTTTCGCAAGCGC+GGG | - | chr1_2:5895116-5895135 | Msa0051790:intron | 50.0% |
| !! | AGGGTGAAACCCCGCTTTTA+TGG | - | chr1_2:5893992-5894011 | Msa0051790:CDS | 50.0% |
| !! | GGGTGAAACCCCGCTTTTAT+GGG | - | chr1_2:5893993-5894012 | Msa0051790:CDS | 50.0% |
| AGCCCATACCCATAAAAGCG+GGG | + | chr1_2:5894004-5894023 | None:intergenic | 50.0% | |
| ! | CGCTTTTATGGGTATGGGCT+TGG | - | chr1_2:5894004-5894023 | Msa0051790:CDS | 50.0% |
| GATGGGTATGGTTGTGGGTA+AGG | - | chr1_2:5894052-5894071 | Msa0051790:CDS | 50.0% | |
| !! | GGTAAGGGCACTATACTACC+CGG | - | chr1_2:5894068-5894087 | Msa0051790:CDS | 50.0% |
| !! | AAAGTGCGGGTAATGGGTAC+GGG | - | chr1_2:5894464-5894483 | Msa0051790:intron | 50.0% |
| ATGGGTACTTAGGTGCCCAT+AGG | - | chr1_2:5894488-5894507 | Msa0051790:intron | 50.0% | |
| TGGGTACTTAGGTGCCCATA+GGG | - | chr1_2:5894489-5894508 | Msa0051790:intron | 50.0% | |
| ACTTAGGTGCCCATAGGGTA+TGG | - | chr1_2:5894494-5894513 | Msa0051790:intron | 50.0% | |
| CTTAGGTGCCCATAGGGTAT+GGG | - | chr1_2:5894495-5894514 | Msa0051790:intron | 50.0% | |
| TTAGGTGCCCATAGGGTATG+GGG | - | chr1_2:5894496-5894515 | Msa0051790:intron | 50.0% | |
| CACTAATGTTGTCACCCACG+AGG | - | chr1_2:5894524-5894543 | Msa0051790:intron | 50.0% | |
| GAACGCAATGGGTACCCAAT+GGG | + | chr1_2:5894613-5894632 | None:intergenic | 50.0% | |
| CTCACATGTAGGGAACGCAA+TGG | + | chr1_2:5894625-5894644 | None:intergenic | 50.0% | |
| TTGCGTTCCCTACATGTGAG+TGG | - | chr1_2:5894625-5894644 | Msa0051790:CDS | 50.0% | |
| !! | TGCCTCTAAAGCACGTGAAC+CGG | + | chr1_2:5894880-5894899 | None:intergenic | 50.0% |
| ! | TGAAACGGTGTGTTTCGGGT+CGG | + | chr1_2:5895045-5895064 | None:intergenic | 50.0% |
| ! | CAAAATGGGTTTCGCAAGCG+CGG | - | chr1_2:5895115-5895134 | Msa0051790:intron | 50.0% |
| ! | AAAATGGGTTTCGCAAGCGC+GGG | - | chr1_2:5895116-5895135 | Msa0051790:intron | 50.0% |
| TATGGGTATGGGCTTGGGTC+CGG | - | chr1_2:5894010-5894029 | Msa0051790:CDS | 55.0% | |
| !! | CGGGTAATGGGTACGGGTAT+GGG | - | chr1_2:5894470-5894489 | Msa0051790:intron | 55.0% |
| GGGTACGGGTATGGGTACTT+AGG | - | chr1_2:5894478-5894497 | Msa0051790:intron | 55.0% | |
| TGCCCATAGGGTATGGGGAA+GGG | - | chr1_2:5894501-5894520 | Msa0051790:intron | 55.0% | |
| TGCCCTTCCCCATACCCTAT+GGG | + | chr1_2:5894506-5894525 | None:intergenic | 55.0% | |
| TGTTGTCACCCACGAGGGTA+CGG | - | chr1_2:5894530-5894549 | Msa0051790:intron | 55.0% | |
| GCAATGGGTACCCAATGGGT+AGG | + | chr1_2:5894609-5894628 | None:intergenic | 55.0% | |
| GGAACGCAATGGGTACCCAA+TGG | + | chr1_2:5894614-5894633 | None:intergenic | 55.0% | |
| TCCCGGTTCACGTGCTTTAG+AGG | - | chr1_2:5894875-5894894 | Msa0051790:intron | 55.0% | |
| !! | GCCTCTAAAGCACGTGAACC+GGG | + | chr1_2:5894879-5894898 | None:intergenic | 55.0% |
| ! | AAATGGGTTTCGCAAGCGCG+GGG | - | chr1_2:5895117-5895136 | Msa0051790:intron | 55.0% |
| TATGGGTATGGGCTTGGGTC+CGG | - | chr1_2:5894010-5894029 | Msa0051790:CDS | 55.0% | |
| !! | CGGGTAATGGGTACGGGTAT+GGG | - | chr1_2:5894470-5894489 | Msa0051790:intron | 55.0% |
| GGGTACGGGTATGGGTACTT+AGG | - | chr1_2:5894478-5894497 | Msa0051790:intron | 55.0% | |
| TGCCCATAGGGTATGGGGAA+GGG | - | chr1_2:5894501-5894520 | Msa0051790:intron | 55.0% | |
| TGCCCTTCCCCATACCCTAT+GGG | + | chr1_2:5894506-5894525 | None:intergenic | 55.0% | |
| TGTTGTCACCCACGAGGGTA+CGG | - | chr1_2:5894530-5894549 | Msa0051790:intron | 55.0% | |
| GCAATGGGTACCCAATGGGT+AGG | + | chr1_2:5894609-5894628 | None:intergenic | 55.0% | |
| GGAACGCAATGGGTACCCAA+TGG | + | chr1_2:5894614-5894633 | None:intergenic | 55.0% | |
| TCCCGGTTCACGTGCTTTAG+AGG | - | chr1_2:5894875-5894894 | Msa0051790:intron | 55.0% | |
| !! | GCCTCTAAAGCACGTGAACC+GGG | + | chr1_2:5894879-5894898 | None:intergenic | 55.0% |
| ! | AAATGGGTTTCGCAAGCGCG+GGG | - | chr1_2:5895117-5895136 | Msa0051790:intron | 55.0% |
| ATGGGTATGGGCTTGGGTCC+GGG | - | chr1_2:5894011-5894030 | Msa0051790:CDS | 60.0% | |
| TATATGCAGGTTGCGGGGCC+GGG | + | chr1_2:5894089-5894108 | None:intergenic | 60.0% | |
| GTATATGCAGGTTGCGGGGC+CGG | + | chr1_2:5894090-5894109 | None:intergenic | 60.0% | |
| !! | GCGGGTAATGGGTACGGGTA+TGG | - | chr1_2:5894469-5894488 | Msa0051790:intron | 60.0% |
| GTGCCCATAGGGTATGGGGA+AGG | - | chr1_2:5894500-5894519 | Msa0051790:intron | 60.0% | |
| GTGCCCTTCCCCATACCCTA+TGG | + | chr1_2:5894507-5894526 | None:intergenic | 60.0% | |
| ATGGGTATGGGCTTGGGTCC+GGG | - | chr1_2:5894011-5894030 | Msa0051790:CDS | 60.0% | |
| TATATGCAGGTTGCGGGGCC+GGG | + | chr1_2:5894089-5894108 | None:intergenic | 60.0% | |
| GTATATGCAGGTTGCGGGGC+CGG | + | chr1_2:5894090-5894109 | None:intergenic | 60.0% | |
| !! | GCGGGTAATGGGTACGGGTA+TGG | - | chr1_2:5894469-5894488 | Msa0051790:intron | 60.0% |
| GTGCCCATAGGGTATGGGGA+AGG | - | chr1_2:5894500-5894519 | Msa0051790:intron | 60.0% | |
| GTGCCCTTCCCCATACCCTA+TGG | + | chr1_2:5894507-5894526 | None:intergenic | 60.0% | |
| ! | TCACCCACGAGGGTACGGCT+CGG | - | chr1_2:5894535-5894554 | Msa0051790:intron | 65.0% |
| TACCCGAGCCGTACCCTCGT+GGG | + | chr1_2:5894541-5894560 | None:intergenic | 65.0% | |
| ATACCCGAGCCGTACCCTCG+TGG | + | chr1_2:5894542-5894561 | None:intergenic | 65.0% | |
| ! | ACGAGGGTACGGCTCGGGTA+TGG | - | chr1_2:5894541-5894560 | Msa0051790:intron | 65.0% |
| ! | CGAGGGTACGGCTCGGGTAT+GGG | - | chr1_2:5894542-5894561 | Msa0051790:intron | 65.0% |
| ! | TCACCCACGAGGGTACGGCT+CGG | - | chr1_2:5894535-5894554 | Msa0051790:intron | 65.0% |
| TACCCGAGCCGTACCCTCGT+GGG | + | chr1_2:5894541-5894560 | None:intergenic | 65.0% | |
| ATACCCGAGCCGTACCCTCG+TGG | + | chr1_2:5894542-5894561 | None:intergenic | 65.0% | |
| ! | ACGAGGGTACGGCTCGGGTA+TGG | - | chr1_2:5894541-5894560 | Msa0051790:intron | 65.0% |
| ! | CGAGGGTACGGCTCGGGTAT+GGG | - | chr1_2:5894542-5894561 | Msa0051790:intron | 65.0% |
| ! | CACCCACGAGGGTACGGCTC+GGG | - | chr1_2:5894536-5894555 | Msa0051790:intron | 70.0% |
| ! | CACCCACGAGGGTACGGCTC+GGG | - | chr1_2:5894536-5894555 | Msa0051790:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 5893986 | 5895202 | 5893986 | ID=Msa0051790;Name=Msa0051790 |
| chr1_2 | mRNA | 5893986 | 5895202 | 5893986 | ID=Msa0051790-mRNA-1;Parent=Msa0051790;Name=Msa0051790-mRNA-1;_AED=0.62;_eAED=1.00;_QI=0|0|0|0.33|1|1|3|0|229 |
| chr1_2 | exon | 5895156 | 5895202 | 5895156 | ID=Msa0051790-mRNA-1:exon:1927;Parent=Msa0051790-mRNA-1 |
| chr1_2 | exon | 5894549 | 5894720 | 5894549 | ID=Msa0051790-mRNA-1:exon:1926;Parent=Msa0051790-mRNA-1 |
| chr1_2 | exon | 5893986 | 5894456 | 5893986 | ID=Msa0051790-mRNA-1:exon:1925;Parent=Msa0051790-mRNA-1 |
| chr1_2 | CDS | 5895156 | 5895202 | 5895156 | ID=Msa0051790-mRNA-1:cds;Parent=Msa0051790-mRNA-1 |
| chr1_2 | CDS | 5894549 | 5894720 | 5894549 | ID=Msa0051790-mRNA-1:cds;Parent=Msa0051790-mRNA-1 |
| chr1_2 | CDS | 5893986 | 5894456 | 5893986 | ID=Msa0051790-mRNA-1:cds;Parent=Msa0051790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
