Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512890 | PNX59699.1 | 59.375 | 64 | 25 | 1 | 1 | 63 | 1 | 64 | 2.27e-16 | 77.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512890 | A0A2K3K079 | 59.375 | 64 | 25 | 1 | 1 | 63 | 1 | 64 | 1.09e-16 | 77.0 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004870 | Msa0512890 | 0.801637 | 8.198217e-49 | -8.615850e-47 |
| Msa0004880 | Msa0512890 | 0.843990 | 9.971048e-59 | -8.615850e-47 |
| Msa0006110 | Msa0512890 | 0.809893 | 1.510625e-50 | -8.615850e-47 |
| Msa0011170 | Msa0512890 | 0.819102 | 1.385266e-52 | -8.615850e-47 |
| Msa0017510 | Msa0512890 | 0.822791 | 1.961289e-53 | -8.615850e-47 |
| Msa0031340 | Msa0512890 | 0.800784 | 1.224888e-48 | -8.615850e-47 |
| Msa0043980 | Msa0512890 | 0.808629 | 2.819352e-50 | -8.615850e-47 |
| Msa0051790 | Msa0512890 | 0.838464 | 2.831372e-57 | -8.615850e-47 |
| Msa0089360 | Msa0512890 | 0.801894 | 7.257625e-49 | -8.615850e-47 |
| Msa0095560 | Msa0512890 | 0.811650 | 6.295464e-51 | -8.615850e-47 |
| Msa0096450 | Msa0512890 | 0.802798 | 4.728451e-49 | -8.615850e-47 |
| Msa0112750 | Msa0512890 | 0.870558 | 1.332568e-66 | -8.615850e-47 |
| Msa0122590 | Msa0512890 | 0.808480 | 3.033698e-50 | -8.615850e-47 |
| Msa0125090 | Msa0512890 | 0.802071 | 6.677147e-49 | -8.615850e-47 |
| Msa0140780 | Msa0512890 | 0.810736 | 9.936958e-51 | -8.615850e-47 |
| Msa0145310 | Msa0512890 | 0.805816 | 1.112085e-49 | -8.615850e-47 |
| Msa0151180 | Msa0512890 | 0.806087 | 9.750878e-50 | -8.615850e-47 |
| Msa0157290 | Msa0512890 | 0.822039 | 2.931611e-53 | -8.615850e-47 |
| Msa0166870 | Msa0512890 | 0.822865 | 1.884416e-53 | -8.615850e-47 |
| Msa0169860 | Msa0512890 | 0.802957 | 4.383471e-49 | -8.615850e-47 |
| Msa0178930 | Msa0512890 | 0.809138 | 2.194481e-50 | -8.615850e-47 |
| Msa0188830 | Msa0512890 | 0.820825 | 5.589716e-53 | -8.615850e-47 |
| Msa0200260 | Msa0512890 | 0.813887 | 2.039128e-51 | -8.615850e-47 |
| Msa0205510 | Msa0512890 | 0.840965 | 6.325250e-58 | -8.615850e-47 |
| Msa0206010 | Msa0512890 | 0.806674 | 7.334214e-50 | -8.615850e-47 |
| Msa0210450 | Msa0512890 | 0.805487 | 1.303473e-49 | -8.615850e-47 |
| Msa0213520 | Msa0512890 | 0.804803 | 1.812331e-49 | -8.615850e-47 |
| Msa0220580 | Msa0512890 | 0.815570 | 8.640394e-52 | -8.615850e-47 |
| Msa0222890 | Msa0512890 | 0.801813 | 7.542532e-49 | -8.615850e-47 |
| Msa0237310 | Msa0512890 | 0.800162 | 1.640227e-48 | -8.615850e-47 |
| Msa0372520 | Msa0512890 | 0.840538 | 8.188348e-58 | -8.615850e-47 |
| Msa0379640 | Msa0512890 | 0.834583 | 2.756485e-56 | -8.615850e-47 |
| Msa0402290 | Msa0512890 | 0.806202 | 9.221775e-50 | -8.615850e-47 |
| Msa0420250 | Msa0512890 | 0.844305 | 8.210992e-59 | -8.615850e-47 |
| Msa0428930 | Msa0512890 | 0.821531 | 3.842952e-53 | -8.615850e-47 |
| Msa0431690 | Msa0512890 | 0.814987 | 1.164069e-51 | -8.615850e-47 |
| Msa0432290 | Msa0512890 | 0.804274 | 2.336943e-49 | -8.615850e-47 |
| Msa0437990 | Msa0512890 | 0.810485 | 1.126100e-50 | -8.615850e-47 |
| Msa0440750 | Msa0512890 | 0.815366 | 9.590913e-52 | -8.615850e-47 |
| Msa0455760 | Msa0512890 | 0.803418 | 3.519295e-49 | -8.615850e-47 |
| Msa0475490 | Msa0512890 | 0.808694 | 2.731203e-50 | -8.615850e-47 |
| Msa0481530 | Msa0512890 | 0.812428 | 4.261206e-51 | -8.615850e-47 |
| Msa0243100 | Msa0512890 | 0.835959 | 1.238705e-56 | -8.615850e-47 |
| Msa0243710 | Msa0512890 | 0.800330 | 1.516341e-48 | -8.615850e-47 |
| Msa0249100 | Msa0512890 | 0.802297 | 5.997731e-49 | -8.615850e-47 |
| Msa0287410 | Msa0512890 | 0.829243 | 5.741066e-55 | -8.615850e-47 |
| Msa0287650 | Msa0512890 | 0.814161 | 1.773499e-51 | -8.615850e-47 |
| Msa0306210 | Msa0512890 | -0.803256 | 3.802183e-49 | -8.615850e-47 |
| Msa0315530 | Msa0512890 | 0.803582 | 3.255083e-49 | -8.615850e-47 |
| Msa0319170 | Msa0512890 | 0.804862 | 1.762141e-49 | -8.615850e-47 |
| Msa0322690 | Msa0512890 | 0.813969 | 1.955307e-51 | -8.615850e-47 |
| Msa0326110 | Msa0512890 | 0.807722 | 4.398625e-50 | -8.615850e-47 |
| Msa0326200 | Msa0512890 | 0.807095 | 5.976409e-50 | -8.615850e-47 |
| Msa0344910 | Msa0512890 | 0.810591 | 1.068368e-50 | -8.615850e-47 |
| Msa0344980 | Msa0512890 | 0.829112 | 6.175435e-55 | -8.615850e-47 |
| Msa0345970 | Msa0512890 | 0.801673 | 8.057515e-49 | -8.615850e-47 |
| Msa0357340 | Msa0512890 | 0.818201 | 2.218222e-52 | -8.615850e-47 |
| Msa0363790 | Msa0512890 | 0.803200 | 3.905641e-49 | -8.615850e-47 |
| Msa0483650 | Msa0512890 | 0.820516 | 6.581770e-53 | -8.615850e-47 |
| Msa0484780 | Msa0512890 | 0.842357 | 2.717448e-58 | -8.615850e-47 |
| Msa0488560 | Msa0512890 | 0.805303 | 1.424876e-49 | -8.615850e-47 |
| Msa0512890 | Msa0512900 | 0.868257 | 7.469616e-66 | -8.615850e-47 |
| Msa0512890 | Msa0516170 | 0.816206 | 6.231957e-52 | -8.615850e-47 |
| Msa0512890 | Msa0523460 | 0.801355 | 9.362481e-49 | -8.615850e-47 |
| Msa0512890 | Msa0529890 | 0.810726 | 9.989503e-51 | -8.615850e-47 |
| Msa0512890 | Msa0532350 | 0.808742 | 2.666750e-50 | -8.615850e-47 |
| Msa0512890 | Msa0536220 | 0.805660 | 1.199315e-49 | -8.615850e-47 |
| Msa0512890 | Msa0537500 | 0.808050 | 3.745894e-50 | -8.615850e-47 |
| Msa0512890 | Msa0551890 | 0.810729 | 9.973079e-51 | -8.615850e-47 |
| Msa0512890 | Msa0555020 | 0.800010 | 1.761394e-48 | -8.615850e-47 |
| Msa0512890 | Msa0575700 | 0.806857 | 6.708364e-50 | -8.615850e-47 |
| Msa0512890 | Msa0585560 | 0.807858 | 4.115356e-50 | -8.615850e-47 |
| Msa0512890 | Msa0599890 | 0.810890 | 9.202488e-51 | -8.615850e-47 |
| Msa0512890 | Msa0607050 | 0.804405 | 2.194327e-49 | -8.615850e-47 |
| Msa0512890 | Msa0608620 | 0.802844 | 4.626559e-49 | -8.615850e-47 |
| Msa0512890 | Msa0612930 | 0.810309 | 1.229189e-50 | -8.615850e-47 |
| Msa0512890 | Msa0625720 | 0.808541 | 2.943919e-50 | -8.615850e-47 |
| Msa0512890 | Msa0635540 | 0.810156 | 1.325667e-50 | -8.615850e-47 |
| Msa0512890 | Msa0635610 | 0.803544 | 3.313739e-49 | -8.615850e-47 |
| Msa0512890 | Msa0641360 | 0.816153 | 6.404477e-52 | -8.615850e-47 |
| Msa0512890 | Msa0657610 | 0.801087 | 1.062551e-48 | -8.615850e-47 |
| Msa0512890 | Msa0657970 | 0.849928 | 2.359644e-60 | -8.615850e-47 |
| Msa0512890 | Msa0663240 | 0.802291 | 6.013730e-49 | -8.615850e-47 |
| Msa0512890 | Msa0663390 | 0.806098 | 9.698557e-50 | -8.615850e-47 |
| Msa0512890 | Msa0667050 | 0.810144 | 1.333554e-50 | -8.615850e-47 |
| Msa0512890 | Msa0673460 | 0.815256 | 1.014497e-51 | -8.615850e-47 |
| Msa0512890 | Msa0682550 | 0.830945 | 2.206751e-55 | -8.615850e-47 |
| Msa0512890 | Msa0688070 | 0.820076 | 8.302129e-53 | -8.615850e-47 |
| Msa0512890 | Msa0688480 | 0.801412 | 9.114078e-49 | -8.615850e-47 |
| Msa0512890 | Msa0693380 | 0.812673 | 3.766432e-51 | -8.615850e-47 |
| Msa0512890 | Msa0696640 | 0.806816 | 6.844957e-50 | -8.615850e-47 |
| Msa0512890 | Msa0697060 | 0.807685 | 4.479605e-50 | -8.615850e-47 |
| Msa0512890 | Msa0715470 | 0.808453 | 3.073620e-50 | -8.615850e-47 |
| Msa0512890 | Msa0724210 | 0.804994 | 1.653500e-49 | -8.615850e-47 |
| Msa0512890 | Msa0740510 | 0.810302 | 1.233064e-50 | -8.615850e-47 |
| Msa0512890 | Msa0741570 | 0.805853 | 1.092107e-49 | -8.615850e-47 |
| Msa0512890 | Msa0750240 | 0.803264 | 3.787398e-49 | -8.615850e-47 |
| Msa0512890 | Msa0759410 | 0.812809 | 3.517628e-51 | -8.615850e-47 |
| Msa0512890 | Msa0764960 | 0.804438 | 2.159904e-49 | -8.615850e-47 |
| Msa0512890 | Msa0793640 | 0.834477 | 2.930001e-56 | -8.615850e-47 |
| Msa0512890 | Msa0802830 | 0.802384 | 5.755030e-49 | -8.615850e-47 |
| Msa0512890 | Msa0806090 | 0.801039 | 1.086767e-48 | -8.615850e-47 |
| Msa0512890 | Msa0820770 | 0.817211 | 3.708339e-52 | -8.615850e-47 |
| Msa0512890 | Msa0820850 | 0.811876 | 5.622502e-51 | -8.615850e-47 |
| Msa0512890 | Msa0830510 | 0.808027 | 3.789993e-50 | -8.615850e-47 |
| Msa0512890 | Msa0832340 | 0.804518 | 2.078947e-49 | -8.615850e-47 |
| Msa0512890 | Msa0861090 | 0.808600 | 2.859924e-50 | -8.615850e-47 |
| Msa0512890 | Msa0861130 | 0.812651 | 3.808369e-51 | -8.615850e-47 |
| Msa0512890 | Msa0880140 | 0.820554 | 6.451898e-53 | -8.615850e-47 |
| Msa0512890 | Msa0887990 | 0.809402 | 1.926073e-50 | -8.615850e-47 |
| Msa0512890 | Msa0893950 | 0.803194 | 3.916998e-49 | -8.615850e-47 |
| Msa0512890 | Msa0897880 | 0.808850 | 2.529315e-50 | -8.615850e-47 |
| Msa0512890 | Msa0898750 | 0.803440 | 3.483283e-49 | -8.615850e-47 |
| Msa0512890 | Msa0907070 | 0.804534 | 2.062762e-49 | -8.615850e-47 |
| Msa0512890 | Msa0909120 | 0.818373 | 2.027265e-52 | -8.615850e-47 |
| Msa0512890 | Msa0933100 | 0.827568 | 1.455722e-54 | -8.615850e-47 |
| Msa0512890 | Msa0933230 | 0.812016 | 5.241664e-51 | -8.615850e-47 |
| Msa0512890 | Msa0954920 | 0.814727 | 1.329713e-51 | -8.615850e-47 |
| Msa0512890 | Msa0965750 | 0.809868 | 1.529424e-50 | -8.615850e-47 |
| Msa0512890 | Msa0969450 | 0.814857 | 1.244470e-51 | -8.615850e-47 |
| Msa0512890 | Msa0969520 | 0.822884 | 1.864979e-53 | -8.615850e-47 |
| Msa0512890 | Msa1014540 | 0.803026 | 4.242894e-49 | -8.615850e-47 |
| Msa0512890 | Msa1044420 | 0.809401 | 1.927361e-50 | -8.615850e-47 |
| Msa0512890 | Msa1075650 | 0.821800 | 3.329436e-53 | -8.615850e-47 |
| Msa0512890 | Msa1079180 | 0.805958 | 1.038309e-49 | -8.615850e-47 |
| Msa0512890 | Msa1081330 | 0.818877 | 1.558569e-52 | -8.615850e-47 |
| Msa0512890 | Msa1082500 | 0.863118 | 3.127040e-64 | -8.615850e-47 |
| Msa0512890 | Msa1098400 | 0.826987 | 2.006098e-54 | -8.615850e-47 |
| Msa0512890 | Msa1131220 | 0.814913 | 1.209087e-51 | -8.615850e-47 |
| Msa0512890 | Msa1161580 | 0.808728 | 2.685457e-50 | -8.615850e-47 |
| Msa0512890 | Msa1172670 | 0.829243 | 5.738947e-55 | -8.615850e-47 |
| Msa0512890 | Msa1186060 | 0.810823 | 9.514516e-51 | -8.615850e-47 |
| Msa0512890 | Msa1193290 | 0.804005 | 2.658129e-49 | -8.615850e-47 |
| Msa0512890 | Msa1224480 | 0.821302 | 4.340972e-53 | -8.615850e-47 |
| Msa0512890 | Msa1233890 | 0.814732 | 1.326329e-51 | -8.615850e-47 |
| Msa0512890 | Msa1284680 | 0.802865 | 4.580825e-49 | -8.615850e-47 |
| Msa0512890 | Msa1292400 | 0.801303 | 9.593994e-49 | -8.615850e-47 |
| Msa0512890 | Msa1297290 | 0.812983 | 3.221560e-51 | -8.615850e-47 |
| Msa0512890 | Msa1298260 | 0.800775 | 1.230418e-48 | -8.615850e-47 |
| Msa0512890 | Msa1305190 | 0.828925 | 6.856298e-55 | -8.615850e-47 |
| Msa0512890 | Msa1305340 | 0.854075 | 1.566405e-61 | -8.615850e-47 |
| Msa0512890 | Msa1306850 | 0.815263 | 1.011141e-51 | -8.615850e-47 |
| Msa0512890 | Msa1314340 | 0.823363 | 1.441813e-53 | -8.615850e-47 |
| Msa0512890 | Msa1318990 | 0.814313 | 1.641999e-51 | -8.615850e-47 |
| Msa0512890 | Msa1325860 | -0.805054 | 1.606157e-49 | -8.615850e-47 |
| Msa0512890 | Msa1331000 | 0.816652 | 4.950886e-52 | -8.615850e-47 |
| Msa0512890 | Msa1344130 | 0.838459 | 2.839506e-57 | -8.615850e-47 |
| Msa0512890 | Msa1353470 | 0.800122 | 1.671169e-48 | -8.615850e-47 |
| Msa0512890 | Msa1353980 | 0.809834 | 1.555492e-50 | -8.615850e-47 |
| Msa0512890 | Msa1359040 | 0.817435 | 3.303271e-52 | -8.615850e-47 |
| Msa0512890 | Msa1372760 | 0.820109 | 8.159073e-53 | -8.615850e-47 |
| Msa0512890 | Msa1374470 | 0.806714 | 7.193484e-50 | -8.615850e-47 |
| Msa0512890 | Msa1385000 | 0.811951 | 5.414261e-51 | -8.615850e-47 |
| Msa0512890 | Msa1392260 | 0.820468 | 6.752259e-53 | -8.615850e-47 |
| Msa0512890 | Msa1397120 | 0.802136 | 6.472798e-49 | -8.615850e-47 |
| Msa0512890 | Msa1403890 | 0.803718 | 3.050201e-49 | -8.615850e-47 |
| Msa0512890 | Msa1407600 | 0.841782 | 3.855418e-58 | -8.615850e-47 |
| Msa0512890 | Msa1411020 | 0.824997 | 5.958444e-54 | -8.615850e-47 |
| Msa0512890 | Msa1417200 | 0.818543 | 1.855848e-52 | -8.615850e-47 |
| Msa0512890 | Msa1420490 | 0.811073 | 8.400278e-51 | -8.615850e-47 |
| Msa0512890 | Msa1423390 | 0.811795 | 5.856577e-51 | -8.615850e-47 |
| Msa0512890 | Msa1424290 | 0.825050 | 5.791680e-54 | -8.615850e-47 |
| Msa0512890 | Msa1424680 | 0.812962 | 3.256341e-51 | -8.615850e-47 |
| Msa0512890 | Msa1425100 | 0.812586 | 3.935674e-51 | -8.615850e-47 |
| Msa0512890 | Msa1427230 | 0.806128 | 9.562283e-50 | -8.615850e-47 |
| Msa0512890 | Msa1429900 | 0.815893 | 7.321076e-52 | -8.615850e-47 |
| Msa0512890 | Msa1434350 | 0.825037 | 5.830755e-54 | -8.615850e-47 |
| Msa0512890 | Msa1438250 | 0.810547 | 1.091815e-50 | -8.615850e-47 |
| Msa0512890 | Msa1439320 | 0.827936 | 1.187776e-54 | -8.615850e-47 |
| Msa0512890 | Msa1440370 | 0.813344 | 2.683954e-51 | -8.615850e-47 |
| Msa0512890 | Msa1440810 | 0.813031 | 3.144301e-51 | -8.615850e-47 |
| Msa0512890 | Msa1452240 | 0.807049 | 6.109589e-50 | -8.615850e-47 |
| Msa0512890 | Msa1462290 | 0.801818 | 7.526527e-49 | -8.615850e-47 |
| Msa0512890 | Msa1463670 | 0.808364 | 3.211536e-50 | -8.615850e-47 |
| Msa0512890 | Msa1464940 | 0.807520 | 4.855350e-50 | -8.615850e-47 |
| Msa0512890 | Msa1466540 | 0.838912 | 2.169012e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512890 | MtrunA17_Chr8g0391561 | 53.125 | 64 | 20 | 2 | 4 | 63 | 5 | 62 | 3.61e-13 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 14 sgRNAs with CRISPR-Local
Find 15 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCCAACGACGGAAATTA+TGG | 0.252778 | 3_4:-62948771 | None:intergenic |
| ACTTCAATTCTGGAAACGTC+TGG | 0.392283 | 3_4:-62948739 | None:intergenic |
| CTTCACACTGCTAGACATCT+AGG | 0.444708 | 3_4:+62948801 | Msa0512890:CDS |
| TGACAATAAGAAGAATGTTT+CGG | 0.460187 | 3_4:+62948654 | Msa0512890:CDS |
| ATGGCCATAATTTCCGTCGT+TGG | 0.472194 | 3_4:+62948767 | Msa0512890:CDS |
| ACAATCTAAGGAATTATGGC+TGG | 0.522622 | 3_4:+62948616 | None:intergenic |
| CTTCAATTCTGGAAACGTCT+GGG | 0.550347 | 3_4:-62948738 | None:intergenic |
| TACTGATCCTCCTCCGACAG+TGG | 0.555859 | 3_4:+62948696 | Msa0512890:CDS |
| TAGGTGACCACTGTCGGAGG+AGG | 0.579910 | 3_4:-62948703 | None:intergenic |
| TTTGCATAGGTGACCACTGT+CGG | 0.584337 | 3_4:-62948709 | None:intergenic |
| GAGGATCAGTAGCAACAACA+AGG | 0.606584 | 3_4:-62948684 | None:intergenic |
| AGATGCGTTCATGCCAACGA+CGG | 0.660184 | 3_4:-62948780 | None:intergenic |
| GCATAGGTGACCACTGTCGG+AGG | 0.668853 | 3_4:-62948706 | None:intergenic |
| AGGATCAGTAGCAACAACAA+GGG | 0.691715 | 3_4:-62948683 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TGACAATAAGAAGAATGTTT+CGG | + | chr3_4:62948654-62948673 | Msa0512890:CDS | 25.0% |
| ! | TCCAGAATTGAAGTTTTTGA+TGG | + | chr3_4:62948748-62948767 | Msa0512890:CDS | 30.0% |
| GCCATCAAAAACTTCAATTC+TGG | - | chr3_4:62948752-62948771 | None:intergenic | 35.0% | |
| AGGATCAGTAGCAACAACAA+GGG | - | chr3_4:62948686-62948705 | None:intergenic | 40.0% | |
| ! | CTTCAATTCTGGAAACGTCT+GGG | - | chr3_4:62948741-62948760 | None:intergenic | 40.0% |
| ! | ACTTCAATTCTGGAAACGTC+TGG | - | chr3_4:62948742-62948761 | None:intergenic | 40.0% |
| GAGGATCAGTAGCAACAACA+AGG | - | chr3_4:62948687-62948706 | None:intergenic | 45.0% | |
| TTTGCATAGGTGACCACTGT+CGG | - | chr3_4:62948712-62948731 | None:intergenic | 45.0% | |
| ! | GTCTGGGAACTGTTTTGCAT+AGG | - | chr3_4:62948725-62948744 | None:intergenic | 45.0% |
| ATGGCCATAATTTCCGTCGT+TGG | + | chr3_4:62948767-62948786 | Msa0512890:CDS | 45.0% | |
| CATGCCAACGACGGAAATTA+TGG | - | chr3_4:62948774-62948793 | None:intergenic | 45.0% | |
| AGATGCGTTCATGCCAACGA+CGG | - | chr3_4:62948783-62948802 | None:intergenic | 50.0% | |
| TACTGATCCTCCTCCGACAG+TGG | + | chr3_4:62948696-62948715 | Msa0512890:CDS | 55.0% | |
| TAGGTGACCACTGTCGGAGG+AGG | - | chr3_4:62948706-62948725 | None:intergenic | 60.0% | |
| GCATAGGTGACCACTGTCGG+AGG | - | chr3_4:62948709-62948728 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 62948631 | 62948822 | 62948631 | ID=Msa0512890;Name=Msa0512890 |
| chr3_4 | mRNA | 62948631 | 62948822 | 62948631 | ID=Msa0512890-mRNA-1;Parent=Msa0512890;Name=Msa0512890-mRNA-1;_AED=0.47;_eAED=0.52;_QI=0|-1|0|1|-1|1|1|0|63 |
| chr3_4 | exon | 62948631 | 62948822 | 62948631 | ID=Msa0512890-mRNA-1:exon:15665;Parent=Msa0512890-mRNA-1 |
| chr3_4 | CDS | 62948631 | 62948822 | 62948631 | ID=Msa0512890-mRNA-1:cds;Parent=Msa0512890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
