AlfalfaGEDB | Msa0658960

M. sativa cultivar zhongmu-4 / Msa0658960

KEGG: -
GO: GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043455 GO:0043565 GO:0044212 GO:0045595 GO:0045597 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1900376 GO:1901141 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1904368 GO:1904369 GO:1990837 GO:2000112 GO:2000762 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0658960	XP_003630131.2	95.745	235	9	1	1	235	1	234	7.74e-155	439

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0658960	sp\|Q9SVB7\|WRK13_ARATH	72.000	125	23	3	122	235	181	304	6.37e-58	188

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0658960	G7LBC7	95.745	235	9	1	1	235	1	234	3.70e-155	439

TFs/TRs:

Gene ID	Type	Classification
Msa0658960	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0658960	Msa0664910	0.806002	1.016236e-49	-8.615850e-47
Msa0658960	Msa0705120	0.888654	4.873699e-73	-8.615850e-47
Msa0658960	Msa0861510	0.838883	2.206379e-57	-8.615850e-47
Msa0658960	Msa0861530	0.829173	5.968398e-55	-8.615850e-47
Msa0658960	Msa0861600	0.829150	6.047216e-55	-8.615850e-47
Msa0658960	Msa0866520	0.804184	2.440366e-49	-8.615850e-47
Msa0658960	Msa0902510	0.822049	2.915917e-53	-8.615850e-47
Msa0658960	Msa1079230	0.808439	3.094888e-50	-8.615850e-47
Msa0658960	Msa1276660	0.814000	1.924774e-51	-8.615850e-47
Msa0658960	Msa1360980	0.802700	4.954679e-49	-8.615850e-47
Msa0658960	Msa1364530	0.803055	4.185030e-49	-8.615850e-47
Msa0658960	Msa1385890	0.814341	1.618641e-51	-8.615850e-47
Msa0658960	Msa1386710	0.826836	2.179967e-54	-8.615850e-47
Msa0658960	Msa1423350	0.808564	2.910986e-50	-8.615850e-47
Msa0221000	Msa0658960	0.843481	1.365036e-58	-8.615850e-47
Msa0365100	Msa0658960	0.823244	1.537505e-53	-8.615850e-47
Msa0378720	Msa0658960	0.829539	4.863994e-55	-8.615850e-47
Msa0406770	Msa0658960	0.810050	1.397216e-50	-8.615850e-47
Msa0427120	Msa0658960	0.811575	6.538372e-51	-8.615850e-47
Msa0473500	Msa0658960	0.821370	4.186911e-53	-8.615850e-47
Msa0474730	Msa0658960	0.826409	2.755816e-54	-8.615850e-47
Msa0479200	Msa0658960	0.808104	3.648674e-50	-8.615850e-47
Msa0277450	Msa0658960	0.822526	2.260219e-53	-8.615850e-47
Msa0284410	Msa0658960	0.800332	1.514419e-48	-8.615850e-47
Msa0297790	Msa0658960	0.808630	2.818003e-50	-8.615850e-47
Msa0300270	Msa0658960	0.846631	1.923283e-59	-8.615850e-47
Msa0300320	Msa0658960	0.843804	1.118301e-58	-8.615850e-47
Msa0300690	Msa0658960	0.811535	6.669798e-51	-8.615850e-47
Msa0337700	Msa0658960	0.828727	7.652792e-55	-8.615850e-47
Msa0341690	Msa0658960	0.801183	1.015396e-48	-8.615850e-47
Msa0358890	Msa0658960	0.817769	2.776969e-52	-8.615850e-47
Msa0360210	Msa0658960	0.806733	7.126282e-50	-8.615850e-47
Msa0547170	Msa0658960	0.802360	5.822602e-49	-8.615850e-47
Msa0556010	Msa0658960	0.801118	1.046733e-48	-8.615850e-47
Msa0568480	Msa0658960	0.931305	4.596904e-94	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0658960	MtrunA17_Chr8g0383351	95.745	235	9	1	1	235	1	234	7.12e-159	439
Msa0658960	MtrunA17_Chr3g0129361	59.919	247	56	11	2	235	4	220	9.55e-77	231
Msa0658960	MtrunA17_Chr8g0335811	57.343	143	50	3	85	227	89	220	1.76e-46	154
Msa0658960	MtrunA17_Chr5g0418781	67.073	82	26	1	136	217	100	180	1.20e-32	119
Msa0658960	MtrunA17_Chr1g0194481	66.234	77	25	1	141	217	139	214	4.60e-30	114
Msa0658960	MtrunA17_Chr4g0051881	69.444	72	21	1	146	217	164	234	5.06e-29	111
Msa0658960	MtrunA17_Chr2g0294231	67.568	74	23	1	144	217	187	259	6.78e-29	112
Msa0658960	MtrunA17_Chr7g0270191	56.566	99	39	3	119	217	107	201	9.53e-29	109
Msa0658960	MtrunA17_Chr3g0101131	62.338	77	28	1	141	217	396	471	9.72e-29	113
Msa0658960	MtrunA17_Chr3g0101131	56.140	57	24	1	161	217	243	298	6.97e-15	73.6
Msa0658960	MtrunA17_Chr3g0106491	62.025	79	29	1	139	217	344	421	1.14e-28	112
Msa0658960	MtrunA17_Chr3g0106491	31.579	152	90	4	69	217	113	253	1.13e-14	72.8
Msa0658960	MtrunA17_Chr5g0445311	59.740	77	30	1	141	217	345	420	1.16e-28	113
Msa0658960	MtrunA17_Chr5g0445311	53.125	64	26	2	161	221	200	262	4.04e-14	71.2
Msa0658960	MtrunA17_Chr7g0218081	49.565	115	53	3	104	217	356	466	1.42e-28	112
Msa0658960	MtrunA17_Chr7g0218081	59.649	57	22	1	161	217	228	283	2.03e-16	77.8
Msa0658960	MtrunA17_Chr7g0248721	56.180	89	34	3	132	217	110	196	2.45e-28	107
Msa0658960	MtrunA17_Chr5g0432161	63.636	77	27	1	141	217	402	477	3.45e-28	112
Msa0658960	MtrunA17_Chr5g0432161	56.140	57	24	1	161	217	244	299	1.19e-14	72.8
Msa0658960	MtrunA17_Chr4g0068541	66.216	74	24	1	144	217	192	264	9.76e-28	109
Msa0658960	MtrunA17_Chr5g0443131	65.278	72	24	1	146	217	143	213	2.18e-27	106
Msa0658960	MtrunA17_Chr4g0042831	41.538	130	63	2	113	233	221	346	4.18e-27	107
Msa0658960	MtrunA17_Chr4g0042831	54.386	57	26	0	161	217	145	201	2.03e-15	74.7
Msa0658960	MtrunA17_Chr5g0418191	59.740	77	30	1	141	217	301	376	7.78e-27	107
Msa0658960	MtrunA17_Chr5g0418191	45.745	94	44	4	143	232	134	224	1.98e-15	74.7
Msa0658960	MtrunA17_Chr3g0079691	59.740	77	30	1	141	217	476	551	1.06e-26	107
Msa0658960	MtrunA17_Chr3g0079691	56.140	57	24	1	161	217	280	335	3.39e-15	74.3
Msa0658960	MtrunA17_Chr7g0224801	62.857	70	25	1	148	217	81	149	1.20e-26	101
Msa0658960	MtrunA17_Chr8g0386241	40.000	115	63	2	125	234	63	176	1.24e-26	101
Msa0658960	MtrunA17_Chr1g0150801	55.814	86	37	1	132	217	74	158	2.10e-26	100
Msa0658960	MtrunA17_Chr4g0004911	57.500	80	33	1	138	217	314	392	3.92e-26	105
Msa0658960	MtrunA17_Chr4g0004911	52.632	57	27	0	161	217	184	240	3.22e-15	74.3
Msa0658960	MtrunA17_Chr7g0249311	52.381	84	39	1	134	217	366	448	1.97e-25	103
Msa0658960	MtrunA17_Chr7g0249311	55.172	58	25	1	161	218	179	235	5.36e-16	76.6
Msa0658960	MtrunA17_Chr7g0249301	54.762	84	37	1	134	217	266	348	5.70e-25	101
Msa0658960	MtrunA17_Chr7g0249301	53.226	62	28	1	160	221	61	121	2.83e-15	73.9
Msa0658960	MtrunA17_Chr7g0243891	57.143	77	32	1	141	217	355	430	1.15e-24	101
Msa0658960	MtrunA17_Chr7g0243891	54.386	57	25	1	161	217	216	271	2.32e-14	71.6
Msa0658960	MtrunA17_Chr3g0129321	58.442	77	30	2	146	221	104	179	5.81e-24	95.1
Msa0658960	MtrunA17_Chr1g0188941	46.739	92	48	1	126	217	17	107	8.13e-24	92.0
Msa0658960	MtrunA17_Chr7g0263531	57.534	73	30	1	145	217	346	417	3.91e-23	96.7
Msa0658960	MtrunA17_Chr7g0263531	57.143	56	23	1	162	217	190	244	1.09e-14	72.8
Msa0658960	MtrunA17_Chr1g0189391	43.519	108	46	2	140	232	62	169	9.28e-23	94.7
Msa0658960	MtrunA17_Chr7g0238921	42.424	99	57	0	119	217	82	180	1.64e-21	90.9
Msa0658960	MtrunA17_Chr8g0383251	53.521	71	32	1	147	217	95	164	3.05e-20	84.7
Msa0658960	MtrunA17_Chr5g0447701	50.667	75	36	1	145	219	237	310	2.70e-19	85.5
Msa0658960	MtrunA17_Chr1g0147881	38.095	126	66	4	99	218	201	320	4.63e-19	84.3
Msa0658960	MtrunA17_Chr2g0333851	47.436	78	39	2	142	217	149	226	4.74e-19	84.3
Msa0658960	MtrunA17_Chr6g0485431	47.945	73	36	2	146	217	140	211	5.29e-19	84.7
Msa0658960	MtrunA17_Chr2g0322391	43.158	95	51	3	138	230	327	420	9.10e-19	84.7
Msa0658960	MtrunA17_Chr3g0139021	46.429	84	40	3	135	217	292	371	1.82e-18	83.2
Msa0658960	MtrunA17_Chr4g0074001	48.052	77	39	1	141	217	340	415	2.15e-18	83.6
Msa0658960	MtrunA17_Chr4g0053281	43.678	87	44	2	133	218	242	324	2.62e-18	82.4
Msa0658960	MtrunA17_Chr5g0401821	43.820	89	45	2	133	220	175	259	3.54e-18	81.3
Msa0658960	MtrunA17_Chr4g0060271	46.753	77	39	2	143	218	238	313	1.96e-17	80.9
Msa0658960	MtrunA17_Chr4g0075201	47.368	76	38	2	143	217	250	324	5.54e-17	79.3
Msa0658960	MtrunA17_Chr7g0228941	50.000	66	32	1	158	222	49	114	5.59e-17	74.7
Msa0658960	MtrunA17_Chr7g0270831	51.562	64	30	1	155	217	210	273	7.82e-17	79.0
Msa0658960	MtrunA17_Chr2g0288871	46.053	76	39	2	143	217	288	362	1.18e-16	78.6
Msa0658960	MtrunA17_Chr3g0099641	44.156	77	41	2	143	218	234	309	1.79e-16	77.8
Msa0658960	MtrunA17_Chr4g0071521	39.080	87	48	2	133	218	221	303	2.14e-16	76.6
Msa0658960	MtrunA17_Chr1g0150281	52.632	57	26	1	162	217	141	197	2.92e-16	75.9
Msa0658960	MtrunA17_Chr7g0216891	52.381	63	29	1	156	217	214	276	5.20e-16	76.6
Msa0658960	MtrunA17_Chr3g0136961	50.000	60	29	1	160	218	137	196	7.81e-16	75.1
Msa0658960	MtrunA17_Chr1g0184691	38.824	85	47	2	135	218	271	351	1.59e-15	74.7
Msa0658960	MtrunA17_Chr4g0025061	48.611	72	35	2	147	217	347	417	2.18e-15	74.7
Msa0658960	MtrunA17_Chr8g0387981	52.308	65	28	1	161	222	132	196	2.72e-15	73.9
Msa0658960	MtrunA17_Chr3g0126391	53.333	60	25	1	160	216	132	191	3.36e-15	73.6
Msa0658960	MtrunA17_Chr2g0302391	36.752	117	69	4	102	217	156	268	6.44e-15	73.2
Msa0658960	MtrunA17_Chr1g0150271	43.077	65	36	1	159	222	99	163	7.72e-15	71.6
Msa0658960	MtrunA17_Chr4g0001361	48.333	60	30	1	159	217	160	219	8.13e-15	72.4
Msa0658960	MtrunA17_Chr8g0348311	37.374	99	52	3	123	217	120	212	1.42e-14	71.6
Msa0658960	MtrunA17_Chr4g0051181	51.667	60	28	1	159	217	241	300	1.45e-14	72.4
Msa0658960	MtrunA17_Chr2g0293481	33.333	126	78	3	97	217	200	324	3.16e-14	71.2
Msa0658960	MtrunA17_Chr7g0244981	50.847	59	26	1	161	216	122	180	3.20e-14	70.5
Msa0658960	MtrunA17_Chr2g0315381	50.820	61	27	1	159	216	142	202	5.50e-14	70.1
Msa0658960	MtrunA17_Chr5g0432071	52.632	57	26	1	161	217	104	159	1.06e-13	67.8
Msa0658960	MtrunA17_Chr2g0315361	46.667	60	29	1	159	215	146	205	2.49e-13	68.2
Msa0658960	MtrunA17_Chr7g0244971	40.476	84	40	3	143	216	98	181	2.53e-13	67.8
Msa0658960	MtrunA17_Chr7g0275531	47.143	70	32	2	160	224	117	186	3.63e-13	67.8
Msa0658960	MtrunA17_Chr8g0379461	48.276	58	29	1	162	218	77	134	4.53e-13	66.6
Msa0658960	MtrunA17_Chr5g0447711	42.667	75	42	1	145	219	215	288	5.12e-13	67.0
Msa0658960	MtrunA17_Chr8g0387501	47.692	65	32	2	155	217	122	186	9.45e-13	65.9
Msa0658960	MtrunA17_Chr2g0284321	46.552	58	30	1	162	218	36	93	1.05e-12	65.1
Msa0658960	MtrunA17_Chr4g0025051	45.946	74	38	2	159	230	333	406	1.07e-12	67.0
Msa0658960	MtrunA17_Chr2g0289181	46.552	58	30	1	162	218	15	72	1.29e-12	65.1
Msa0658960	MtrunA17_Chr8g0334541	45.763	59	29	1	161	216	103	161	1.49e-12	65.5
Msa0658960	MtrunA17_Chr7g0248691	36.842	95	53	2	124	217	123	211	2.05e-12	65.5
Msa0658960	MtrunA17_Chr8g0350621	44.068	59	30	1	161	216	111	169	2.50e-12	64.7
Msa0658960	MtrunA17_Chr8g0347251	35.714	126	72	3	107	229	88	207	2.73e-12	65.5
Msa0658960	MtrunA17_Chr7g0270051	49.123	57	28	1	162	217	54	110	7.05e-12	63.5
Msa0658960	MtrunA17_Chr2g0315371	43.333	60	31	1	159	215	139	198	1.47e-11	62.8
Msa0658960	MtrunA17_Chr2g0319961	46.552	58	30	1	162	218	81	138	1.86e-11	62.4
Msa0658960	MtrunA17_Chr3g0128671	42.424	66	30	2	162	219	128	193	4.19e-11	61.6
Msa0658960	MtrunA17_Chr1g0202461	44.828	58	31	1	162	218	262	319	7.01e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0658960	AT4G39410.1	72.000	125	23	3	122	235	181	304	6.48e-59	188
Msa0658960	AT2G44745.1	65.600	125	39	3	101	222	83	206	8.00e-48	157
Msa0658960	AT1G69310.4	65.060	83	28	1	135	217	122	203	2.07e-33	122
Msa0658960	AT1G69310.2	65.060	83	28	1	135	217	122	203	2.07e-33	122
Msa0658960	AT1G69310.1	65.060	83	28	1	135	217	122	203	2.07e-33	122
Msa0658960	AT5G41570.1	61.176	85	32	1	133	217	71	154	2.22e-30	111
Msa0658960	AT1G64000.1	63.415	82	29	1	136	217	90	170	2.30e-30	112
Msa0658960	AT2G46130.1	59.091	88	34	2	141	228	11	96	1.32e-29	107
Msa0658960	AT4G18170.1	65.854	82	26	2	141	221	153	233	1.82e-29	112
Msa0658960	AT5G49520.1	67.568	74	23	1	144	217	205	277	2.99e-29	113
Msa0658960	AT4G26640.5	55.435	92	33	2	133	217	171	261	4.96e-29	112
Msa0658960	AT4G26640.5	53.125	64	29	1	154	217	28	90	3.78e-14	71.2
Msa0658960	AT4G26640.6	55.435	92	33	2	133	217	171	261	4.96e-29	112
Msa0658960	AT4G26640.6	53.125	64	29	1	154	217	28	90	3.78e-14	71.2
Msa0658960	AT4G26640.4	55.435	92	33	2	133	217	171	261	4.96e-29	112
Msa0658960	AT4G26640.4	53.125	64	29	1	154	217	28	90	3.78e-14	71.2
Msa0658960	AT4G26640.3	55.435	92	33	2	133	217	171	261	4.96e-29	112
Msa0658960	AT4G26640.3	53.125	64	29	1	154	217	28	90	3.78e-14	71.2
Msa0658960	AT4G26640.7	55.435	92	33	2	133	217	307	397	6.43e-29	114
Msa0658960	AT4G26640.7	53.125	64	29	1	154	217	164	226	1.79e-14	72.4
Msa0658960	AT4G26640.1	55.435	92	33	2	133	217	275	365	7.36e-29	113
Msa0658960	AT4G26640.1	53.125	64	29	1	154	217	132	194	2.30e-14	72.0
Msa0658960	AT4G26640.2	55.435	92	33	2	133	217	347	437	8.78e-29	114
Msa0658960	AT4G26640.2	53.125	64	29	1	154	217	204	266	1.89e-14	72.4
Msa0658960	AT5G07100.1	50.000	110	44	2	108	217	192	290	2.73e-28	109
Msa0658960	AT5G07100.1	52.632	57	27	0	161	217	117	173	4.62e-14	70.5
Msa0658960	AT5G07100.2	50.000	110	44	2	108	217	99	197	3.47e-28	107
Msa0658960	AT5G07100.2	52.632	57	27	0	161	217	24	80	8.05e-14	68.6
Msa0658960	AT5G07100.4	50.000	110	44	2	108	217	99	197	3.47e-28	107
Msa0658960	AT5G07100.4	52.632	57	27	0	161	217	24	80	8.05e-14	68.6
Msa0658960	AT5G07100.5	50.000	110	44	2	108	217	99	197	3.47e-28	107
Msa0658960	AT5G07100.5	52.632	57	27	0	161	217	24	80	8.05e-14	68.6
Msa0658960	AT5G07100.3	50.000	110	44	2	108	217	99	197	3.47e-28	107
Msa0658960	AT5G07100.3	52.632	57	27	0	161	217	24	80	8.05e-14	68.6
Msa0658960	AT5G26170.1	64.000	75	26	1	147	221	100	173	4.79e-28	105
Msa0658960	AT1G69310.3	60.241	83	28	2	135	217	122	199	9.31e-28	107
Msa0658960	AT2G47260.1	60.465	86	32	2	132	217	147	230	1.58e-27	107
Msa0658960	AT1G29860.1	64.865	74	25	1	144	217	120	192	1.92e-27	106
Msa0658960	AT2G38470.1	63.636	77	27	1	141	217	343	418	2.79e-27	109
Msa0658960	AT2G38470.1	54.386	57	25	1	161	217	184	239	1.14e-13	70.1
Msa0658960	AT2G03340.1	44.737	114	62	1	104	217	359	471	3.66e-27	108
Msa0658960	AT2G03340.1	56.140	57	24	1	161	217	250	305	6.14e-14	70.9
Msa0658960	AT1G13960.1	61.039	77	29	1	141	217	390	465	3.83e-27	108
Msa0658960	AT1G13960.1	55.932	59	25	1	161	219	229	286	2.48e-15	75.1
Msa0658960	AT1G13960.2	61.039	77	29	1	141	217	237	312	6.19e-27	106
Msa0658960	AT1G13960.2	55.932	59	25	1	161	219	76	133	1.02e-14	72.8
Msa0658960	AT2G30250.1	63.636	77	27	1	141	217	309	384	6.32e-27	107
Msa0658960	AT2G30250.1	50.877	57	27	1	161	217	166	221	2.48e-11	63.2
Msa0658960	AT5G56270.1	61.039	77	29	1	141	217	468	543	9.31e-27	108
Msa0658960	AT5G56270.1	56.140	57	24	1	161	217	273	328	1.42e-15	75.9
Msa0658960	AT5G46350.1	65.278	72	24	1	146	217	169	239	1.66e-26	105
Msa0658960	AT3G01080.2	55.056	89	35	2	133	217	313	400	2.13e-26	106
Msa0658960	AT3G01080.2	56.140	57	24	1	161	217	205	260	2.25e-15	75.1
Msa0658960	AT3G01080.1	55.056	89	35	2	133	217	275	362	3.69e-26	105
Msa0658960	AT3G01080.1	56.140	57	24	1	161	217	167	222	4.54e-15	73.9
Msa0658960	AT5G13080.1	63.380	71	25	1	147	217	54	123	4.51e-26	99.4
Msa0658960	AT3G01970.1	54.444	90	37	2	147	233	52	140	5.24e-26	99.4
Msa0658960	AT4G26440.1	57.143	77	32	1	141	217	353	428	1.53e-24	101
Msa0658960	AT4G26440.1	56.897	58	24	1	161	218	178	234	6.06e-17	79.7
Msa0658960	AT2G46130.2	54.545	88	34	3	141	228	11	92	4.51e-24	92.8
Msa0658960	AT2G37260.2	62.500	64	24	0	154	217	260	323	6.65e-24	98.2
Msa0658960	AT2G37260.2	49.315	73	36	1	146	218	68	139	4.19e-14	70.9
Msa0658960	AT2G37260.3	62.500	64	24	0	154	217	262	325	7.10e-24	98.2
Msa0658960	AT2G37260.3	49.315	73	36	1	146	218	70	141	4.44e-14	70.9
Msa0658960	AT5G64810.1	39.844	128	70	2	90	217	46	166	8.19e-24	94.7
Msa0658960	AT2G37260.1	62.500	64	24	0	154	217	342	405	1.25e-23	98.6
Msa0658960	AT2G37260.1	49.315	73	36	1	146	218	150	221	4.77e-14	71.2
Msa0658960	AT3G62340.1	59.524	84	31	2	134	217	94	174	1.65e-23	95.9
Msa0658960	AT2G04880.2	32.273	220	107	9	5	217	155	339	1.33e-21	93.2
Msa0658960	AT2G04880.2	55.932	59	25	1	159	217	109	166	1.72e-14	72.4
Msa0658960	AT1G55600.1	45.882	85	46	0	133	217	279	363	1.30e-20	90.1
Msa0658960	AT2G04880.1	36.420	162	75	6	63	217	223	363	1.35e-20	90.1
Msa0658960	AT2G04880.1	55.932	59	25	1	159	217	109	166	1.93e-14	72.4
Msa0658960	AT2G21900.1	47.253	91	41	4	136	220	80	169	1.84e-19	83.6
Msa0658960	AT2G23320.1	47.126	87	41	2	133	218	216	298	8.25e-19	84.0
Msa0658960	AT4G31550.2	34.783	161	86	5	81	234	171	319	1.35e-18	83.6
Msa0658960	AT4G31550.1	35.404	161	86	5	81	234	171	320	1.45e-18	83.2
Msa0658960	AT5G43290.1	50.704	71	35	0	147	217	100	170	2.00e-18	82.0
Msa0658960	AT5G15130.2	48.052	77	38	2	143	218	168	243	3.89e-18	83.2
Msa0658960	AT5G15130.1	48.052	77	38	2	143	218	210	285	4.50e-18	83.2
Msa0658960	AT4G30935.1	54.839	62	28	0	156	217	326	387	8.35e-18	82.0
Msa0658960	AT4G31800.2	47.887	71	36	1	159	228	109	179	2.65e-17	78.6
Msa0658960	AT2G25000.2	51.667	60	28	1	160	218	102	161	2.73e-17	78.2
Msa0658960	AT2G25000.4	51.667	60	28	1	160	218	102	161	2.73e-17	78.2
Msa0658960	AT4G04450.2	35.772	123	66	2	96	217	145	255	2.99e-17	80.5
Msa0658960	AT2G25000.3	51.667	60	28	1	160	218	124	183	3.72e-17	78.2
Msa0658960	AT4G31800.1	51.667	60	28	1	159	217	174	233	5.37e-17	79.0
Msa0658960	AT2G25000.1	51.667	60	28	1	160	218	145	204	5.48e-17	78.2
Msa0658960	AT5G28650.1	41.379	87	46	2	133	218	238	320	8.11e-17	78.6
Msa0658960	AT4G04450.1	35.772	123	66	2	96	217	239	349	8.23e-17	79.3
Msa0658960	AT2G30590.1	43.023	86	44	2	133	217	289	370	8.32e-17	79.0
Msa0658960	AT1G80840.1	43.678	87	45	3	135	217	117	203	1.19e-16	77.8
Msa0658960	AT2G24570.1	41.509	106	52	3	113	217	204	300	2.66e-16	77.0
Msa0658960	AT1G62300.1	47.368	76	38	2	143	217	295	369	3.33e-16	77.8
Msa0658960	AT3G01080.3	56.140	57	24	1	161	217	205	260	5.12e-16	76.3
Msa0658960	AT4G22070.4	47.368	76	38	2	143	217	280	354	5.80e-16	77.0
Msa0658960	AT4G22070.3	47.368	76	38	2	143	217	280	354	5.80e-16	77.0
Msa0658960	AT4G22070.2	47.368	76	38	2	143	217	280	354	5.80e-16	77.0
Msa0658960	AT4G22070.1	47.368	76	38	2	143	217	280	354	5.80e-16	77.0
Msa0658960	AT3G04670.1	40.230	87	47	2	133	218	238	320	7.15e-16	75.9
Msa0658960	AT4G24240.1	40.230	87	47	2	133	218	257	339	9.78e-16	75.5
Msa0658960	AT4G01720.1	38.739	111	55	3	119	217	187	296	2.05e-15	75.1
Msa0658960	AT1G18860.1	51.667	60	28	1	159	217	237	296	6.91e-15	73.6
Msa0658960	AT4G01250.1	41.463	82	38	3	140	217	110	185	1.23e-14	72.0
Msa0658960	AT1G68150.1	39.216	102	53	3	121	217	195	292	1.73e-14	72.0
Msa0658960	AT1G66550.2	49.153	59	27	1	161	216	103	161	2.46e-14	70.5
Msa0658960	AT1G66550.1	49.153	59	27	1	161	216	108	166	3.49e-14	70.1
Msa0658960	AT1G66560.1	49.153	59	27	1	161	216	103	161	4.57e-14	69.7
Msa0658960	AT3G56400.1	37.349	83	43	2	143	216	96	178	6.06e-14	70.1
Msa0658960	AT2G34830.1	38.636	88	52	2	132	217	185	272	1.91e-13	69.3
Msa0658960	AT2G34830.2	38.636	88	52	2	132	217	194	281	2.00e-13	69.3
Msa0658960	AT5G01900.1	35.366	82	50	1	138	216	87	168	2.07e-13	68.2
Msa0658960	AT1G69810.2	44.156	77	40	3	143	217	128	203	3.30e-13	68.2
Msa0658960	AT1G29280.1	44.444	63	34	1	156	217	69	131	3.56e-13	67.4
Msa0658960	AT1G69810.1	44.156	77	40	3	143	217	186	261	3.72e-13	68.6
Msa0658960	AT2G40740.1	29.787	188	112	7	37	215	54	230	3.83e-13	67.8
Msa0658960	AT1G30650.1	38.636	88	52	2	132	217	187	274	4.58e-13	68.2
Msa0658960	AT2G40740.3	29.787	188	112	7	37	215	63	239	4.70e-13	67.4
Msa0658960	AT4G12020.3	44.928	69	37	1	160	228	467	534	1.24e-12	67.4
Msa0658960	AT4G12020.10	44.928	69	37	1	160	228	467	534	1.27e-12	67.4
Msa0658960	AT4G12020.4	44.928	69	37	1	160	228	467	534	1.27e-12	67.4
Msa0658960	AT4G12020.2	44.928	69	37	1	160	228	467	534	1.28e-12	67.4
Msa0658960	AT4G12020.5	44.928	69	37	1	160	228	400	467	1.32e-12	67.4
Msa0658960	AT4G12020.6	44.928	69	37	1	160	228	467	534	1.37e-12	67.4
Msa0658960	AT4G12020.8	44.928	69	37	1	160	228	467	534	1.37e-12	67.4
Msa0658960	AT4G12020.7	44.928	69	37	1	160	228	467	534	1.43e-12	67.4
Msa0658960	AT4G12020.1	44.928	69	37	1	160	228	467	534	1.45e-12	67.4
Msa0658960	AT4G12020.9	44.928	69	37	1	160	228	467	534	1.45e-12	67.4
Msa0658960	AT1G66600.1	47.458	59	28	1	160	215	102	160	1.49e-12	65.5
Msa0658960	AT5G52830.1	49.123	57	28	1	162	217	166	222	1.51e-12	66.6
Msa0658960	AT4G12020.11	44.928	69	37	1	160	228	467	534	2.07e-12	66.6
Msa0658960	AT4G23550.1	44.262	61	33	1	158	217	137	197	2.11e-12	65.9
Msa0658960	AT5G22570.1	46.552	58	28	1	162	216	111	168	1.12e-11	63.5
Msa0658960	AT1G80590.1	44.828	58	29	1	162	216	86	143	1.55e-11	62.4
Msa0658960	AT2G46400.1	36.471	85	51	1	134	215	77	161	2.25e-11	62.8
Msa0658960	AT5G24110.1	39.759	83	38	2	159	229	111	193	3.05e-11	62.4
Msa0658960	AT2G40750.1	41.667	72	38	2	161	229	152	222	8.09e-11	61.2
Msa0658960	AT5G45050.4	47.368	57	29	1	162	217	1042	1098	8.28e-11	62.0
Msa0658960	AT5G45050.1	47.368	57	29	1	162	217	1181	1237	9.30e-11	62.0
Msa0658960	AT5G45050.2	47.368	57	29	1	162	217	1153	1209	9.45e-11	62.0

Find 74 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAACCTAACTTTCCCTTCTT+TGG	0.155148	4_3:-69198457	Msa0658960:CDS
ATATATATATAGGGCAATAT+TGG	0.271320	4_3:-69197702	Msa0658960:intron
CTCAATCTGACAATTTCTTA+TGG	0.303911	4_3:-69196566	Msa0658960:CDS
GATCATCATGATAATCATTT+GGG	0.306049	4_3:-69197626	Msa0658960:CDS
AACCTAACTTTCCCTTCTTT+GGG	0.323054	4_3:-69198456	Msa0658960:CDS
TTGAGGATTGGTTGTGAGTA+GGG	0.323819	4_3:+69198350	None:intergenic
TTGAGAGTCTTCAAGATCAT+TGG	0.350233	4_3:+69196590	None:intergenic
GAAGGGAAAGTTAGGTTTGT+TGG	0.351164	4_3:+69198462	None:intergenic
GGTTACAAGTGGAGGAAGTA+TGG	0.371030	4_3:-69197497	Msa0658960:CDS
CAAGGCAAAACTATAAAGTA+TGG	0.372064	4_3:+69196194	None:intergenic
AGATCATCATGATAATCATT+TGG	0.374995	4_3:-69197627	Msa0658960:CDS
GAATACCTCACTTCTAGCTT+TGG	0.383644	4_3:-69198318	Msa0658960:CDS
CTTTCTTCTTTAATTATATG+AGG	0.385541	4_3:+69198595	None:intergenic
TTTGAGGATTGGTTGTGAGT+AGG	0.394005	4_3:+69198349	None:intergenic
AAGGGAAAGTTAGGTTTGTT+GGG	0.400880	4_3:+69198463	None:intergenic
AATAATAGTGGTAAAAGAAA+TGG	0.401015	4_3:-69197653	Msa0658960:CDS
TATGTGGTTATTACCATCCT+TGG	0.403815	4_3:+69196639	None:intergenic
CTCATATAATTAAAGAAGAA+AGG	0.411657	4_3:-69198594	Msa0658960:five_prime_UTR
TATATATATAGGGCAATATT+GGG	0.416994	4_3:-69197701	Msa0658960:intron
CATCATATGGTGTGCTTGGA+AGG	0.421273	4_3:+69196373	None:intergenic
TCTACTAATATTAAAGGTCT+AGG	0.424898	4_3:-69196483	Msa0658960:three_prime_UTR
AACCCAAAGAAGGGAAAGTT+AGG	0.429367	4_3:+69198454	None:intergenic
CCAAACACAGAAAATTGAAT+AGG	0.430088	4_3:+69196171	None:intergenic
GGATCAGATTCCCACACAAA+TGG	0.430482	4_3:-69198499	Msa0658960:CDS
GATCAGATTCCCACACAAAT+GGG	0.432708	4_3:-69198498	Msa0658960:CDS
CAGCCATCATATGGTGTGCT+TGG	0.459290	4_3:+69196369	None:intergenic
CAACAACTTATTTGAGGTGG+AGG	0.477228	4_3:-69198520	Msa0658960:CDS
AGTAATTGCATGAATAATAG+TGG	0.478312	4_3:-69197665	Msa0658960:CDS
GATTGATTGCAACCCAAAGA+AGG	0.483315	4_3:+69198444	None:intergenic
TGTTGACAACAACTTATTTG+AGG	0.484854	4_3:-69198526	Msa0658960:CDS
CATGAAAATGAAGAAAATGA+AGG	0.488233	4_3:-69197591	Msa0658960:CDS
TACCTCACTTCTAGCTTTGG+AGG	0.489395	4_3:-69198315	Msa0658960:CDS
TCTAGAGCTAGCAAGAGGTT+AGG	0.492548	4_3:+69198647	None:intergenic
AAAGTTAGGTTTGTTGGGAA+AGG	0.496923	4_3:+69198468	None:intergenic
TCATATAATTAAAGAAGAAA+GGG	0.504785	4_3:-69198593	Msa0658960:five_prime_UTR
AGATGTAAGTGAAGAAGCTA+TGG	0.510048	4_3:+69198404	None:intergenic
TACATGTCTTCCTTCATATG+TGG	0.519036	4_3:+69196623	None:intergenic
ATGGTAATAACCACATATGA+AGG	0.520270	4_3:-69196633	Msa0658960:CDS
CAATGGATCTATGCAAGGAT+AGG	0.526046	4_3:+69198280	None:intergenic
AAGATCAAATAAGTACAGAA+TGG	0.531246	4_3:-69196440	Msa0658960:three_prime_UTR
ATGAAAATGAAGAAAATGAA+GGG	0.532779	4_3:-69197590	Msa0658960:CDS
CTTCCAAGCACACCATATGA+TGG	0.538420	4_3:-69196372	Msa0658960:three_prime_UTR
TGAAGAAGCTATGGAACTGA+AGG	0.544848	4_3:+69198413	None:intergenic
GTCTCACCATGGATTTACAA+TGG	0.548992	4_3:+69198263	None:intergenic
CACAGAAAATTGAATAGGCA+AGG	0.549519	4_3:+69196176	None:intergenic
TATGGTGTGCTTGGAAGGGA+TGG	0.557396	4_3:+69196378	None:intergenic
GATGTGGATGTGTTGGATGA+TGG	0.559861	4_3:-69197518	Msa0658960:CDS
CTTGGTGTTCTCTAGATGCA+TGG	0.560309	4_3:-69196324	Msa0658960:three_prime_UTR
TGACAACAACTTATTTGAGG+TGG	0.569668	4_3:-69198523	Msa0658960:CDS
AGGAATGAACCCCATTTGTG+TGG	0.571470	4_3:+69198488	None:intergenic
GAAAGAAAGTGAGAGAGCCT+AGG	0.575300	4_3:-69197565	Msa0658960:CDS
GATCTATGCAAGGATAGGAA+TGG	0.576173	4_3:+69198285	None:intergenic
ATTGATTGCAACCCAAAGAA+GGG	0.576930	4_3:+69198445	None:intergenic
GAGTCTTCAAGATCATTGGA+TGG	0.577891	4_3:+69196594	None:intergenic
ATAGATCCATTGTAAATCCA+TGG	0.578759	4_3:-69198269	Msa0658960:intron
GAGTACTGATGTGGATGTGT+TGG	0.603265	4_3:-69197525	Msa0658960:CDS
TAAAGAACACACAACATCCC+AGG	0.608791	4_3:-69197463	Msa0658960:intron
ATTTACAATGGATCTATGCA+AGG	0.612859	4_3:+69198275	None:intergenic
GGAATGAACCCCATTTGTGT+GGG	0.612916	4_3:+69198489	None:intergenic
AGCGCTTAGCTGAAGATCCA+AGG	0.615258	4_3:-69196656	Msa0658960:CDS
ATCATCATGATAATCATTTG+GGG	0.627967	4_3:-69197625	Msa0658960:CDS
TGGATGATGGTTACAAGTGG+AGG	0.635586	4_3:-69197505	Msa0658960:CDS
GACAATTCTCTTGTGTGCAA+CGG	0.637189	4_3:+69196697	None:intergenic
AGCTTTCTAGAGCTAGCAAG+AGG	0.638887	4_3:+69198642	None:intergenic
ATCATATGGTGTGCTTGGAA+GGG	0.650374	4_3:+69196374	None:intergenic
CTTAGCTGAAGATCCAAGGA+TGG	0.650835	4_3:-69196652	Msa0658960:CDS
TCATCATGATAATCATTTGG+GGG	0.652014	4_3:-69197624	Msa0658960:CDS
ATATATAGGGCAATATTGGG+AGG	0.658760	4_3:-69197698	Msa0658960:intron
AATGTCTTGAAGCAAAACCT+AGG	0.659684	4_3:+69197548	None:intergenic
ATCAGATTCCCACACAAATG+GGG	0.662202	4_3:-69198497	Msa0658960:CDS
TGTTGGATGATGGTTACAAG+TGG	0.666245	4_3:-69197508	Msa0658960:CDS
TTGTCGTGTAAAGAAACGTG+TGG	0.671845	4_3:-69196679	Msa0658960:CDS
CAAGACATTGAGTACTGATG+TGG	0.685676	4_3:-69197534	Msa0658960:CDS
TTCCTCCAAAGCTAGAAGTG+AGG	0.687037	4_3:+69198313	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTCATTTTTAACTTTTTT+TGG	+	chr4_3:69196639-69196658	None:intergenic	10.0%
!!	TATATATATATAACATTTGA+GGG	+	chr4_3:69197929-69197948	None:intergenic	10.0%
!!	ATATATATATATAACATTTG+AGG	+	chr4_3:69197930-69197949	None:intergenic	10.0%
!!	TCATATAATTAAAGAAGAAA+GGG	-	chr4_3:69196246-69196265	Msa0658960:three_prime_UTR	15.0%
!!!	TATTTTAGCTAATTAGTTAA+TGG	-	chr4_3:69196793-69196812	Msa0658960:intron	15.0%
!!	TATATCAACTAAAAATTCAA+GGG	-	chr4_3:69197399-69197418	Msa0658960:intron	15.0%
!!	GATGAAAAAAATAATAATGA+AGG	+	chr4_3:69197740-69197759	None:intergenic	15.0%
!!!	ATGTTTTCTACTAATATTAA+AGG	-	chr4_3:69198350-69198369	Msa0658960:CDS	15.0%
!!	CTTTCTTCTTTAATTATATG+AGG	+	chr4_3:69196247-69196266	None:intergenic	20.0%
!!	CTCATATAATTAAAGAAGAA+AGG	-	chr4_3:69196245-69196264	Msa0658960:three_prime_UTR	20.0%
!!	ATGAAAATGAAAATTAGAGA+CGG	-	chr4_3:69196652-69196671	Msa0658960:CDS	20.0%
!!	ACATCAAATTTGGTAAAATA+TGG	+	chr4_3:69196697-69196716	None:intergenic	20.0%
!!	AAAATAAATTGAAGTAGCAA+CGG	+	chr4_3:69196779-69196798	None:intergenic	20.0%
!!	ATATATATATAGGGCAATAT+TGG	-	chr4_3:69197137-69197156	Msa0658960:intron	20.0%
!!	TATATATATAGGGCAATATT+GGG	-	chr4_3:69197138-69197157	Msa0658960:intron	20.0%
!!	AATAATAGTGGTAAAAGAAA+TGG	-	chr4_3:69197186-69197205	Msa0658960:intron	20.0%
!!	ATGAAAATGAAGAAAATGAA+GGG	-	chr4_3:69197249-69197268	Msa0658960:intron	20.0%
!!!	AATTTTTAGTTGATATACCT+GGG	+	chr4_3:69197396-69197415	None:intergenic	20.0%
!!	GTATATCAACTAAAAATTCA+AGG	-	chr4_3:69197398-69197417	Msa0658960:intron	20.0%
!!	AATAATAATGAAGGAAAGAA+GGG	+	chr4_3:69197731-69197750	None:intergenic	20.0%
!!	AAATAATAATGAAGGAAAGA+AGG	+	chr4_3:69197732-69197751	None:intergenic	20.0%
!!!	ATTAATTCTTTGTGTTTTGA+AGG	-	chr4_3:69198026-69198045	Msa0658960:intron	20.0%
!!!	GTTTTTAACGTACTTTATTT+TGG	-	chr4_3:69198053-69198072	Msa0658960:intron	20.0%
!!	ATTATATGAGACAATTAACT+TGG	+	chr4_3:69198094-69198113	None:intergenic	20.0%
!!	GTGAAATTGAAAAATGTATT+TGG	-	chr4_3:69198423-69198442	Msa0658960:CDS	20.0%
!!!	TTCAAGTTTTTATTTAGTCT+TGG	-	chr4_3:69198497-69198516	Msa0658960:CDS	20.0%
!!!	TTCTTTTGATTTTTGAGGAT+TGG	+	chr4_3:69196504-69196523	None:intergenic	25.0%
!!!	AGGTATTCTTTTGATTTTTG+AGG	+	chr4_3:69196509-69196528	None:intergenic	25.0%
!	GAGACGGAAAAATTAATATT+CGG	-	chr4_3:69196668-69196687	Msa0658960:CDS	25.0%
!	AGTAATTGCATGAATAATAG+TGG	-	chr4_3:69197174-69197193	Msa0658960:intron	25.0%
!	AGATCATCATGATAATCATT+TGG	-	chr4_3:69197212-69197231	Msa0658960:intron	25.0%
!	GATCATCATGATAATCATTT+GGG	-	chr4_3:69197213-69197232	Msa0658960:intron	25.0%
!	ATCATCATGATAATCATTTG+GGG	-	chr4_3:69197214-69197233	Msa0658960:intron	25.0%
!!	CTTCATTTTCTTCATTTTCA+TGG	+	chr4_3:69197250-69197269	None:intergenic	25.0%
!	CATGAAAATGAAGAAAATGA+AGG	-	chr4_3:69197248-69197267	Msa0658960:intron	25.0%
!!!	GAATTTTTAGTTGATATACC+TGG	+	chr4_3:69197397-69197416	None:intergenic	25.0%
!	TACTGTAATATTTAGAGGTA+CGG	+	chr4_3:69197563-69197582	None:intergenic	25.0%
!	ATGGATACTGTAATATTTAG+AGG	+	chr4_3:69197568-69197587	None:intergenic	25.0%
!	ATTACAGTATCCATGAAAAA+TGG	-	chr4_3:69197574-69197593	Msa0658960:CDS	25.0%
!	ATGGTCAAATGTAGTTATTA+TGG	-	chr4_3:69197593-69197612	Msa0658960:CDS	25.0%
!	TGGTCAAATGTAGTTATTAT+GGG	-	chr4_3:69197594-69197613	Msa0658960:CDS	25.0%
!!!	ACTGATTAGCTTTAATTTAC+TGG	-	chr4_3:69197763-69197782	Msa0658960:intron	25.0%
!!	ATATGCAAAAGAAACTTGTT+CGG	-	chr4_3:69197856-69197875	Msa0658960:intron	25.0%
!	TCTACTAATATTAAAGGTCT+AGG	-	chr4_3:69198356-69198375	Msa0658960:CDS	25.0%
!	AAGATCAAATAAGTACAGAA+TGG	-	chr4_3:69198399-69198418	Msa0658960:CDS	25.0%
	GAGTTTCTCAATGAAAAAGT+TGG	+	chr4_3:69196225-69196244	None:intergenic	30.0%
	TGTTGACAACAACTTATTTG+AGG	-	chr4_3:69196313-69196332	Msa0658960:three_prime_UTR	30.0%
	ATTTACAATGGATCTATGCA+AGG	+	chr4_3:69196567-69196586	None:intergenic	30.0%
	ATAGATCCATTGTAAATCCA+TGG	-	chr4_3:69196570-69196589	Msa0658960:CDS	30.0%
	CTAATGTAATCTCTAAGTGT+TGG	+	chr4_3:69196722-69196741	None:intergenic	30.0%
!!!	AGAATTTTTCAAGACACAGT+TGG	-	chr4_3:69196847-69196866	Msa0658960:intron	30.0%
!!	CACAGTTGGCAAATTTTAAT+TGG	-	chr4_3:69196861-69196880	Msa0658960:intron	30.0%
	GCTATATATAGATTGTCTGA+CGG	-	chr4_3:69197090-69197109	Msa0658960:intron	30.0%
	CTATATATAGATTGTCTGAC+GGG	-	chr4_3:69197091-69197110	Msa0658960:intron	30.0%
	TCATCATGATAATCATTTGG+GGG	-	chr4_3:69197215-69197234	Msa0658960:intron	30.0%
!!	CTACATTTGACCATTTTTCA+TGG	+	chr4_3:69197587-69197606	None:intergenic	30.0%
	GGTCAAATGTAGTTATTATG+GGG	-	chr4_3:69197595-69197614	Msa0658960:CDS	30.0%
	GAGAGAACATATGTAAGTTT+GGG	+	chr4_3:69197695-69197714	None:intergenic	30.0%
	AGAGAGAACATATGTAAGTT+TGG	+	chr4_3:69197696-69197715	None:intergenic	30.0%
!!	TAGCTTTAATTTACTGGCTT+CGG	-	chr4_3:69197769-69197788	Msa0658960:intron	30.0%
	AATAGCCATACATCACATAA+AGG	+	chr4_3:69198005-69198024	None:intergenic	30.0%
	ATGGTAATAACCACATATGA+AGG	-	chr4_3:69198206-69198225	Msa0658960:intron	30.0%
	CTCAATCTGACAATTTCTTA+TGG	-	chr4_3:69198273-69198292	Msa0658960:CDS	30.0%
	TTGAAAAATCAGCCATCATA+TGG	+	chr4_3:69198482-69198501	None:intergenic	30.0%
!!	TTTTGATTGAAACACGATAC+TGG	+	chr4_3:69198557-69198576	None:intergenic	30.0%
	CAAGGCAAAACTATAAAGTA+TGG	+	chr4_3:69198648-69198667	None:intergenic	30.0%
	TGACAACAACTTATTTGAGG+TGG	-	chr4_3:69196316-69196335	Msa0658960:three_prime_UTR	35.0%
!!	AAAGTTAGGTTTGTTGGGAA+AGG	+	chr4_3:69196374-69196393	None:intergenic	35.0%
!	AAGGGAAAGTTAGGTTTGTT+GGG	+	chr4_3:69196379-69196398	None:intergenic	35.0%
	AAACCTAACTTTCCCTTCTT+TGG	-	chr4_3:69196382-69196401	Msa0658960:three_prime_UTR	35.0%
	AACCTAACTTTCCCTTCTTT+GGG	-	chr4_3:69196383-69196402	Msa0658960:three_prime_UTR	35.0%
	ATTGATTGCAACCCAAAGAA+GGG	+	chr4_3:69196397-69196416	None:intergenic	35.0%
	AGATGTAAGTGAAGAAGCTA+TGG	+	chr4_3:69196438-69196457	None:intergenic	35.0%
!!!	GAATTGTTTTTGTCTCACCA+TGG	+	chr4_3:69196590-69196609	None:intergenic	35.0%
!	AGTGTTGGAGACATCAAATT+TGG	+	chr4_3:69196707-69196726	None:intergenic	35.0%
	ATATATAGGGCAATATTGGG+AGG	-	chr4_3:69197141-69197160	Msa0658960:intron	35.0%
	AATGTCTTGAAGCAAAACCT+AGG	+	chr4_3:69197294-69197313	None:intergenic	35.0%
	CAAATGTAGTTATTATGGGG+TGG	-	chr4_3:69197598-69197617	Msa0658960:CDS	35.0%
!!	AGCTTTAATTTACTGGCTTC+GGG	-	chr4_3:69197770-69197789	Msa0658960:intron	35.0%
	TTGCATATGCATGTAGTGAA+AGG	+	chr4_3:69197844-69197863	None:intergenic	35.0%
	TATGTGGTTATTACCATCCT+TGG	+	chr4_3:69198203-69198222	None:intergenic	35.0%
	TACATGTCTTCCTTCATATG+TGG	+	chr4_3:69198219-69198238	None:intergenic	35.0%
	TTGAGAGTCTTCAAGATCAT+TGG	+	chr4_3:69198252-69198271	None:intergenic	35.0%
!	CAACAACTTATTTGAGGTGG+AGG	-	chr4_3:69196319-69196338	Msa0658960:three_prime_UTR	40.0%
	GATCAGATTCCCACACAAAT+GGG	-	chr4_3:69196341-69196360	Msa0658960:three_prime_UTR	40.0%
	ATCAGATTCCCACACAAATG+GGG	-	chr4_3:69196342-69196361	Msa0658960:three_prime_UTR	40.0%
	GAAGGGAAAGTTAGGTTTGT+TGG	+	chr4_3:69196380-69196399	None:intergenic	40.0%
	AACCCAAAGAAGGGAAAGTT+AGG	+	chr4_3:69196388-69196407	None:intergenic	40.0%
	GATTGATTGCAACCCAAAGA+AGG	+	chr4_3:69196398-69196417	None:intergenic	40.0%
	TGAAGAAGCTATGGAACTGA+AGG	+	chr4_3:69196429-69196448	None:intergenic	40.0%
!!	TTGAGGATTGGTTGTGAGTA+GGG	+	chr4_3:69196492-69196511	None:intergenic	40.0%
!!	TTTGAGGATTGGTTGTGAGT+AGG	+	chr4_3:69196493-69196512	None:intergenic	40.0%
!!	GAATACCTCACTTCTAGCTT+TGG	-	chr4_3:69196521-69196540	Msa0658960:three_prime_UTR	40.0%
	GATCTATGCAAGGATAGGAA+TGG	+	chr4_3:69196557-69196576	None:intergenic	40.0%
	CAATGGATCTATGCAAGGAT+AGG	+	chr4_3:69196562-69196581	None:intergenic	40.0%
	GTCTCACCATGGATTTACAA+TGG	+	chr4_3:69196579-69196598	None:intergenic	40.0%
	TGTGGCTGAAAAATAGGAAG+TGG	+	chr4_3:69196900-69196919	None:intergenic	40.0%
	CTATTTGCCACAATTCAAGG+AGG	+	chr4_3:69196923-69196942	None:intergenic	40.0%
	GCACTATTTGCCACAATTCA+AGG	+	chr4_3:69196926-69196945	None:intergenic	40.0%
!!	CAAGACATTGAGTACTGATG+TGG	-	chr4_3:69197305-69197324	Msa0658960:intron	40.0%
!	TGTTGGATGATGGTTACAAG+TGG	-	chr4_3:69197331-69197350	Msa0658960:intron	40.0%
	TAAAGAACACACAACATCCC+AGG	-	chr4_3:69197376-69197395	Msa0658960:intron	40.0%
	ATGTAGTTATTATGGGGTGG+AGG	-	chr4_3:69197601-69197620	Msa0658960:CDS	40.0%
!	GTTTGGGACACAATGAATCA+AGG	+	chr4_3:69197679-69197698	None:intergenic	40.0%
	TAATGAAGGAAAGAAGGGTG+TGG	+	chr4_3:69197726-69197745	None:intergenic	40.0%
!!	TTAATTTACTGGCTTCGGGA+AGG	-	chr4_3:69197774-69197793	Msa0658960:intron	40.0%
	AGGAAAAGTGATCACATGTG+AGG	+	chr4_3:69197975-69197994	None:intergenic	40.0%
!!	CACATGTGATCACTTTTCCT+AGG	-	chr4_3:69197975-69197994	Msa0658960:intron	40.0%
!!	ATGTGATCACTTTTCCTAGG+TGG	-	chr4_3:69197978-69197997	Msa0658960:intron	40.0%
	GTGGACCTTTATGTGATGTA+TGG	-	chr4_3:69197997-69198016	Msa0658960:intron	40.0%
	GACAATTCTCTTGTGTGCAA+CGG	+	chr4_3:69198145-69198164	None:intergenic	40.0%
	TTGTCGTGTAAAGAAACGTG+TGG	-	chr4_3:69198160-69198179	Msa0658960:intron	40.0%
	GAGTCTTCAAGATCATTGGA+TGG	+	chr4_3:69198248-69198267	None:intergenic	40.0%
	ATCATATGGTGTGCTTGGAA+GGG	+	chr4_3:69198468-69198487	None:intergenic	40.0%
!	TCTAGAGCTAGCAAGAGGTT+AGG	+	chr4_3:69196195-69196214	None:intergenic	45.0%
!!	AGCTTTCTAGAGCTAGCAAG+AGG	+	chr4_3:69196200-69196219	None:intergenic	45.0%
	GGATCAGATTCCCACACAAA+TGG	-	chr4_3:69196340-69196359	Msa0658960:three_prime_UTR	45.0%
	GGAATGAACCCCATTTGTGT+GGG	+	chr4_3:69196353-69196372	None:intergenic	45.0%
	AGGAATGAACCCCATTTGTG+TGG	+	chr4_3:69196354-69196373	None:intergenic	45.0%
!!	TACCTCACTTCTAGCTTTGG+AGG	-	chr4_3:69196524-69196543	Msa0658960:three_prime_UTR	45.0%
	TTCCTCCAAAGCTAGAAGTG+AGG	+	chr4_3:69196529-69196548	None:intergenic	45.0%
!	AGGAGGTGTGGCTGAAAAAT+AGG	+	chr4_3:69196906-69196925	None:intergenic	45.0%
	GAAAGAAAGTGAGAGAGCCT+AGG	-	chr4_3:69197274-69197293	Msa0658960:intron	45.0%
!!	GAGTACTGATGTGGATGTGT+TGG	-	chr4_3:69197314-69197333	Msa0658960:intron	45.0%
	GATGTGGATGTGTTGGATGA+TGG	-	chr4_3:69197321-69197340	Msa0658960:intron	45.0%
!	TGGATGATGGTTACAAGTGG+AGG	-	chr4_3:69197334-69197353	Msa0658960:intron	45.0%
	GGTTACAAGTGGAGGAAGTA+TGG	-	chr4_3:69197342-69197361	Msa0658960:intron	45.0%
	CATCACATAAAGGTCCACCT+AGG	+	chr4_3:69197995-69198014	None:intergenic	45.0%
	CTTAGCTGAAGATCCAAGGA+TGG	-	chr4_3:69198187-69198206	Msa0658960:intron	45.0%
	CATCATATGGTGTGCTTGGA+AGG	+	chr4_3:69198469-69198488	None:intergenic	45.0%
	CTTCCAAGCACACCATATGA+TGG	-	chr4_3:69198467-69198486	Msa0658960:CDS	45.0%
!!	CTTGGTGTTCTCTAGATGCA+TGG	-	chr4_3:69198515-69198534	Msa0658960:CDS	45.0%
!!	TTTCATATATATATATATAT+AGG	-	chr4_3:69197127-69197146	Msa0658960:intron	5.0%
!!	TTCATATATATATATATATA+GGG	-	chr4_3:69197128-69197147	Msa0658960:intron	5.0%
	AGCCACACCTCCTTGAATTG+TGG	-	chr4_3:69196913-69196932	Msa0658960:intron	50.0%
	TGCCACAATTCAAGGAGGTG+TGG	+	chr4_3:69196918-69196937	None:intergenic	50.0%
!	GGAAAGAAGGGTGTGGAGAT+TGG	+	chr4_3:69197719-69197738	None:intergenic	50.0%
	AGCGCTTAGCTGAAGATCCA+AGG	-	chr4_3:69198183-69198202	Msa0658960:intron	50.0%
	TATGGTGTGCTTGGAAGGGA+TGG	+	chr4_3:69198464-69198483	None:intergenic	50.0%
	CAGCCATCATATGGTGTGCT+TGG	+	chr4_3:69198473-69198492	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_3	gene	69196185	69198676	69196185	ID=Msa0658960;Name=Msa0658960
chr4_3	mRNA	69196185	69198676	69196185	ID=Msa0658960-mRNA-1;Parent=Msa0658960;Name=Msa0658960-mRNA-1;_AED=0.03;_eAED=0.03;_QI=114\|1\|1\|1\|1\|1\|3\|378\|235
chr4_3	exon	69196185	69196728	69196185	ID=Msa0658960-mRNA-1:exon:20281;Parent=Msa0658960-mRNA-1
chr4_3	exon	69197464	69197712	69197464	ID=Msa0658960-mRNA-1:exon:20280;Parent=Msa0658960-mRNA-1
chr4_3	exon	69198270	69198676	69198270	ID=Msa0658960-mRNA-1:exon:20279;Parent=Msa0658960-mRNA-1
chr4_3	five_prime_UTR	69198563	69198676	69198563	ID=Msa0658960-mRNA-1:five_prime_utr;Parent=Msa0658960-mRNA-1
chr4_3	CDS	69198270	69198562	69198270	ID=Msa0658960-mRNA-1:cds;Parent=Msa0658960-mRNA-1
chr4_3	CDS	69197464	69197712	69197464	ID=Msa0658960-mRNA-1:cds;Parent=Msa0658960-mRNA-1
chr4_3	CDS	69196563	69196728	69196563	ID=Msa0658960-mRNA-1:cds;Parent=Msa0658960-mRNA-1
chr4_3	three_prime_UTR	69196185	69196562	69196185	ID=Msa0658960-mRNA-1:three_prime_utr;Parent=Msa0658960-mRNA-1

Gene Sequence

>Msa0658960

ATGTCTCAAATTATTGTTGACAACAACTTATTTGAGGTGGAGGATCAGATTCCCACACAAATGGGGTTCATTCCTTTCCCAACAAACCTAACTTTCCCTTCTTTGGGTTGCAATCAATCTTTGAAAGCCTTCAGTTCCATAGCTTCTTCACTTACATCTGAATCAGATTCTACATCAAATCTAACACAAACCCTACTCACAACCAATCCTCAAAAATCAAAAGAATACCTCACTTCTAGCTTTGGAGGAAGTACTCCATTCCTATCCTTGCATAGATCCATTGTAAATCCATGGGCAATATTGGGAGGAGAAGTAATAAGTAATTGCATGAATAATAGTGGTAAAAGAAATGGAGTAGATCATCATGATAATCATTTGGGGGTTTCTGCTACCATGAAAATGAAGAAAATGAAGGGAAGAAAGAAAGTGAGAGAGCCTAGGTTTTGCTTCAAGACATTGAGTACTGATGTGGATGTGTTGGATGATGGTTACAAGTGGAGGAAGTATGGACAAAAAGTTGTAAAGAACACACAACATCCCAGAAGCTATTACCGTTGCACACAAGAGAATTGTCGTGTAAAGAAACGTGTGGAGCGCTTAGCTGAAGATCCAAGGATGGTAATAACCACATATGAAGGAAGACATGTACATTCTCCATCCAATGATCTTGAAGACTCTCAAACTCAATCTGACAATTTCTTATGGTAG

Protein sequence

>Msa0658960

MSQIIVDNNLFEVEDQIPTQMGFIPFPTNLTFPSLGCNQSLKAFSSIASSLTSESDSTSNLTQTLLTTNPQKSKEYLTSSFGGSTPFLSLHRSIVNPWAILGGEVISNCMNNSGKRNGVDHHDNHLGVSATMKMKKMKGRKKVREPRFCFKTLSTDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQENCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLEDSQTQSDNFLW*