AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0284410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0284410 MtrunA17_Chr7g0223041 73.134 67 18 0 15 81 104 170 3.44e-27 100
Msa0284410 MtrunA17_Chr4g0031081 50.000 60 30 0 14 73 122 181 3.39e-16 70.5
Msa0284410 MtrunA17_Chr3g0110401 36.047 86 47 1 1 78 36 121 1.10e-14 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0284410 AT5G02530.2 60.714 56 22 0 14 69 136 191 1.75e-17 74.3
Msa0284410 AT5G02530.1 60.714 56 22 0 14 69 136 191 1.78e-17 74.3
Msa0284410 AT5G59950.2 43.750 80 36 2 4 74 32 111 2.50e-16 69.7
Msa0284410 AT5G59950.4 43.750 80 36 2 4 74 98 177 4.20e-16 69.7
Msa0284410 AT5G59950.3 43.750 80 36 2 4 74 96 175 5.91e-16 69.7
Msa0284410 AT5G59950.1 51.613 62 29 1 14 74 116 177 1.45e-15 68.9
Msa0284410 AT5G59950.5 51.613 62 29 1 14 74 116 177 1.47e-15 68.9

Find 171 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCCATCTGGTTCGTATTC+TGG 0.050300 2_3:-22378492 Msa0284410:five_prime_UTR
AAATTCTTTATCCGGGTTTC+TGG 0.114080 2_3:-22378015 Msa0284410:five_prime_UTR
ACTTATAATGCGATGATTAA+TGG 0.195435 2_3:-22377218 Msa0284410:five_prime_UTR
AGTTATAATGTTATGATTAA+TGG 0.206496 2_3:-22377323 Msa0284410:five_prime_UTR
TTAATAGATGGAATCAAATT+AGG 0.211510 2_3:-22377683 Msa0284410:five_prime_UTR
CCGAATTGCTTCCAAGCTTT+TGG 0.236972 2_3:-22376556 Msa0284410:five_prime_UTR
TAACTCTATTCTTGATTGTT+TGG 0.239488 2_3:-22376688 Msa0284410:five_prime_UTR
TGCAACCAAATGAAGCTTTA+TGG 0.245030 2_3:-22375031 Msa0284410:CDS
CGGTTTCGGCTTTGGCGATT+TGG 0.249754 2_3:+22377708 None:intergenic
CGTTATACGTAAACTTCTTA+TGG 0.257242 2_3:+22378079 None:intergenic
TATTAAAACGGTTTCGGCTT+TGG 0.258489 2_3:+22377700 None:intergenic
AAGTGAAATGCAGTATAAAT+TGG 0.282707 2_3:+22377844 None:intergenic
AAGATGGCTTTAAGATCTTA+AGG 0.294821 2_3:-22376521 Msa0284410:five_prime_UTR
TGACTTGCACATTGTGGATA+TGG 0.299360 2_3:+22377733 None:intergenic
AACTCTATTCTTGATTGTTT+GGG 0.302813 2_3:-22376687 Msa0284410:five_prime_UTR
TCATGCTGCACAACCTTTGC+AGG 0.303361 2_3:-22376590 Msa0284410:five_prime_UTR
TACATGAACACGTTGGGTTT+TGG 0.317243 2_3:-22376729 Msa0284410:five_prime_UTR
ATCCATCTGGTTCGTATTCT+GGG 0.321353 2_3:-22378491 Msa0284410:five_prime_UTR
GAAAACTTCTGCTGTTCCTT+TGG 0.326079 2_3:+22375093 None:intergenic
AAATGCTTCAATCAGGAATA+AGG 0.333272 2_3:-22377466 Msa0284410:five_prime_UTR
TCCATCTATTAAAACGGTTT+CGG 0.333443 2_3:+22377694 None:intergenic
AAGTTGCTTTGTTGAACTTC+GGG 0.341550 2_3:-22376388 Msa0284410:five_prime_UTR
ATAACGCGTTGATGTTGTTT+AGG 0.354555 2_3:-22377277 Msa0284410:five_prime_UTR
ACTTACAACACATTAATTGA+TGG 0.359448 2_3:-22377641 Msa0284410:five_prime_UTR
TCCATTCATTACGATCAGTT+TGG 0.363184 2_3:-22375121 Msa0284410:CDS
TGGGTCAGGTTTCATCCATC+TGG 0.368024 2_3:-22378504 Msa0284410:five_prime_UTR
AATTCTTTATCCGGGTTTCT+GGG 0.371051 2_3:-22378014 Msa0284410:five_prime_UTR
CTTATAATGCGATGATTAAT+GGG 0.372076 2_3:-22377217 Msa0284410:five_prime_UTR
AGAGGAGGAAATTCTTTATC+CGG 0.373149 2_3:-22378023 Msa0284410:five_prime_UTR
TCTTTCCATAAAGCTTCATT+TGG 0.376217 2_3:+22375026 None:intergenic
TCATTATGCCACAAGGCATT+TGG 0.382705 2_3:-22376251 Msa0284410:intron
CATGTAATCCAAATGCTTCA+TGG 0.386424 2_3:+22376746 None:intergenic
TGCAGGTGCCATGAAGCATT+TGG 0.386701 2_3:-22376754 Msa0284410:five_prime_UTR
CATAAGAAGTTTACGTATAA+CGG 0.391769 2_3:-22378078 Msa0284410:five_prime_UTR
GAAAAGTTAAGTTGAAAATC+CGG 0.394379 2_3:-22376440 Msa0284410:five_prime_UTR
TTTGATGAAATGCTTCAATC+AGG 0.397990 2_3:-22377473 Msa0284410:five_prime_UTR
GCAGCGTCGTGGATTTGTTC+CGG 0.401851 2_3:-22377249 Msa0284410:five_prime_UTR
TCCTACAATTCATTAATGTC+TGG 0.405547 2_3:-22377536 Msa0284410:five_prime_UTR
CTATCTATGATCCATTCTTC+AGG 0.411222 2_3:-22378451 Msa0284410:intron
CCTCATTGCTTCACAAATCC+CGG 0.411275 2_3:-22377903 Msa0284410:five_prime_UTR
TTGGTTGCTTCTATTAAAGA+TGG 0.413056 2_3:-22376537 Msa0284410:five_prime_UTR
TGAGCTTGTTGGAACAAGAT+TGG 0.415142 2_3:-22374993 Msa0284410:CDS
TCTGGGGTAGCTTCTGATAG+AGG 0.416544 2_3:-22377997 Msa0284410:five_prime_UTR
CGTTGATAATCGAGTGATCA+TGG 0.418820 2_3:+22377772 None:intergenic
GTTGCTGCGTTGGTGAAGAC+GGG 0.421289 2_3:-22376993 Msa0284410:five_prime_UTR
CAATGATAAATTTGTTCTGC+GGG 0.426603 2_3:-22376893 Msa0284410:five_prime_UTR
GAAGTTGCTTTGTTGAACTT+CGG 0.432318 2_3:-22376389 Msa0284410:five_prime_UTR
ACATTGCAAATTGAGCTTGT+TGG 0.438151 2_3:-22375004 Msa0284410:CDS
CGTGCGATGCACTGCTAGAA+AGG 0.439765 2_3:+22377971 None:intergenic
CCAAAAGCTTGGAAGCAATT+CGG 0.443375 2_3:+22376556 None:intergenic
TTTGATTCCATCTATTAAAA+CGG 0.446260 2_3:+22377688 None:intergenic
ACCAGACATTAATGAATTGT+AGG 0.448210 2_3:+22377535 None:intergenic
AGATGGCTTTAAGATCTTAA+GGG 0.448573 2_3:-22376520 Msa0284410:five_prime_UTR
TGGTTTCGTGTTGTTGAATC+CGG 0.450356 2_3:+22377869 None:intergenic
TTCGGAATATTGTTGAGAGA+GGG 0.464976 2_3:-22377367 Msa0284410:five_prime_UTR
TGATGAGGTGTTGAGGTTGG+TGG 0.468200 2_3:-22376859 Msa0284410:five_prime_UTR
ATTGATGGTCTCACTACCTC+TGG 0.468352 2_3:-22376480 Msa0284410:five_prime_UTR
GGTTGCTGCGTTGGTGAAGA+CGG 0.468793 2_3:-22376994 Msa0284410:five_prime_UTR
TTCGTGTTGTTGAATCCGGT+TGG 0.470292 2_3:+22377873 None:intergenic
ATTAATGGTTTGTGTAAGAA+TGG 0.471278 2_3:-22377308 Msa0284410:five_prime_UTR
CTTGATTGTTTGGGTAAAGC+TGG 0.473206 2_3:-22376678 Msa0284410:five_prime_UTR
GAATCCGGTTGGGTTGGACC+CGG 0.476196 2_3:+22377884 None:intergenic
TCCAAACTGATCGTAATGAA+TGG 0.476290 2_3:+22375120 None:intergenic
TTGGATTACATGAACACGTT+GGG 0.477428 2_3:-22376735 Msa0284410:five_prime_UTR
TATAATCCATGGATTATGTA+AGG 0.478298 2_3:-22376787 Msa0284410:five_prime_UTR
AAAACACCATTCGCTTCCTC+CGG 0.481781 2_3:+22377389 None:intergenic
GAAAATCCGGGAGGCTCGAT+TGG 0.482595 2_3:-22376427 Msa0284410:five_prime_UTR
ACTCAAAGAGCTGTTATTGA+TGG 0.484315 2_3:-22376495 Msa0284410:five_prime_UTR
AATAGAAGCAACCAAAAGCT+TGG 0.484532 2_3:+22376545 None:intergenic
CTCAACAGAATGAAAGAAGC+TGG 0.486073 2_3:-22377578 Msa0284410:five_prime_UTR
ACCACAACACTATTGTTAAG+AGG 0.489127 2_3:-22378041 Msa0284410:five_prime_UTR
TCGTGTTGTTGAATCCGGTT+GGG 0.489494 2_3:+22377874 None:intergenic
GAGTGTGAATGCGAAGGACT+AGG 0.489942 2_3:+22377939 None:intergenic
CAACTCGTACGAATTGAGAA+AGG 0.490013 2_3:+22378541 None:intergenic
ATATTATAACTCCACACATC+AGG 0.492736 2_3:+22377443 None:intergenic
CGCGGTAACTGTCATTCAAA+GGG 0.493742 2_3:-22376283 Msa0284410:five_prime_UTR
GAGGAGGAAATTCTTTATCC+GGG 0.494489 2_3:-22378022 Msa0284410:five_prime_UTR
TGGGAGGTTGAAGCAAGGGT+TGG 0.495509 2_3:-22377078 Msa0284410:five_prime_UTR
AGCGGATGCAAGGAGGGTGC+TGG 0.496260 2_3:-22377174 Msa0284410:five_prime_UTR
TGCCATCCTTACATAATCCA+TGG 0.502738 2_3:+22376781 None:intergenic
GTGGTACAGGTAATCGCATT+CGG 0.506627 2_3:+22377125 None:intergenic
TATTGATTGTGCTGCAACGC+CGG 0.508620 2_3:+22378570 None:intergenic
TTGTACGGTGGTTGCTGCGT+TGG 0.508731 2_3:-22377003 Msa0284410:five_prime_UTR
ACACTTCATAACCGTGGTAC+AGG 0.513756 2_3:+22377112 None:intergenic
ACATTATAACTCGCCGTACT+CGG 0.513940 2_3:+22377335 None:intergenic
CTTTCTAGCAGTGCATCGCA+CGG 0.514297 2_3:-22377970 Msa0284410:five_prime_UTR
GGTGTGGGAGGTTGAAGCAA+GGG 0.514715 2_3:-22377082 Msa0284410:five_prime_UTR
CATTTGGTTGCACCTCCCGA+GGG 0.515105 2_3:+22375042 None:intergenic
TTGTGAAGCAATGAGGGAGG+AGG 0.515873 2_3:+22377910 None:intergenic
TCTGATGCTCTAGCAGCCCT+CGG 0.517431 2_3:-22375058 Msa0284410:CDS
TCGGAATATTGTTGAGAGAG+GGG 0.517751 2_3:-22377366 Msa0284410:five_prime_UTR
TCATTTGGTTGCACCTCCCG+AGG 0.518833 2_3:+22375041 None:intergenic
GTTGTTGAATCCGGTTGGGT+TGG 0.520913 2_3:+22377878 None:intergenic
AATCCGGTTGGGTTGGACCC+GGG 0.522501 2_3:+22377885 None:intergenic
AGTGTTGTGGTGAGATCTGT+TGG 0.523836 2_3:+22378053 None:intergenic
ATAGACACATACCTGAAGAA+TGG 0.524136 2_3:+22378440 None:intergenic
GTTTGATGAGGTGTTGAGGT+TGG 0.526930 2_3:-22376862 Msa0284410:five_prime_UTR
AATCCCGGGTCCAACCCAAC+CGG 0.530153 2_3:-22377888 Msa0284410:five_prime_UTR
TCCTCTTAACAATAGTGTTG+TGG 0.530428 2_3:+22378040 None:intergenic
TTTCGGAATATTGTTGAGAG+AGG 0.530502 2_3:-22377368 Msa0284410:five_prime_UTR
CTCATTGCTTCACAAATCCC+GGG 0.533470 2_3:-22377902 Msa0284410:five_prime_UTR
GAAGATGATGAGTAATGGTT+TGG 0.537272 2_3:-22376940 Msa0284410:five_prime_UTR
ACCCACACGATTATAATCCA+TGG 0.538307 2_3:-22376798 Msa0284410:five_prime_UTR
GTGTTGTAAGTGATAATGTC+AGG 0.540093 2_3:+22377653 None:intergenic
TTGTCGGGGATGAGGAGGAA+AGG 0.540614 2_3:-22377050 Msa0284410:five_prime_UTR
CTGATGCTCTAGCAGCCCTC+GGG 0.542026 2_3:-22375057 Msa0284410:CDS
AACTCGTACGAATTGAGAAA+GGG 0.543238 2_3:+22378542 None:intergenic
AGGTGTGGGAGGTTGAAGCA+AGG 0.545402 2_3:-22377083 Msa0284410:five_prime_UTR
CTGATTCTGATACATTAGTC+CGG 0.546268 2_3:-22376315 Msa0284410:five_prime_UTR
ATCCATGGATTATAATCGTG+TGG 0.546587 2_3:+22376796 None:intergenic
CAAGGAGGTTAGCGGATGCA+AGG 0.547389 2_3:-22377184 Msa0284410:five_prime_UTR
AAAAGTTAAGTTGAAAATCC+GGG 0.549048 2_3:-22376439 Msa0284410:five_prime_UTR
GAAGCATTTCATCAAACAGA+TGG 0.549380 2_3:+22377480 None:intergenic
ATCCATGGATTATGTAAGGA+TGG 0.553586 2_3:-22376783 Msa0284410:five_prime_UTR
CGGGATTTGTGAAGCAATGA+GGG 0.554298 2_3:+22377904 None:intergenic
GTATTATAAGAAGCAAGATC+CGG 0.556711 2_3:+22376915 None:intergenic
GATGATTAATGGGTTGTGTA+AGG 0.559887 2_3:-22377207 Msa0284410:five_prime_UTR
ATGCTCTAGCAGCCCTCGGG+AGG 0.560805 2_3:-22375054 Msa0284410:CDS
ATTTGTTCTGCGGGCAAGCG+AGG 0.562499 2_3:-22376884 Msa0284410:five_prime_UTR
GCATTATAAGTCAAAACCTC+CGG 0.564745 2_3:+22377230 None:intergenic
GAATTGTAGGAAACAACATC+AGG 0.565322 2_3:+22377548 None:intergenic
GGAACTTCTTAGCCCTGCAA+AGG 0.567332 2_3:+22376577 None:intergenic
TCGCGGTAACTGTCATTCAA+AGG 0.568410 2_3:-22376284 Msa0284410:five_prime_UTR
CGAGGTTTGATGAGGTGTTG+AGG 0.569990 2_3:-22376866 Msa0284410:five_prime_UTR
ACAATGATAAATTTGTTCTG+CGG 0.570903 2_3:-22376894 Msa0284410:five_prime_UTR
TTTAGGAATTTGCAGCGTCG+TGG 0.578301 2_3:-22377260 Msa0284410:five_prime_UTR
AATGCACCAATCGAGCCTCC+CGG 0.578699 2_3:+22376421 None:intergenic
TTTCTAGCAGTGCATCGCAC+GGG 0.579665 2_3:-22377969 Msa0284410:five_prime_UTR
GAGGTTAGCGGATGCAAGGA+GGG 0.585852 2_3:-22377180 Msa0284410:five_prime_UTR
CAATTCATTAATGTCTGGTG+CGG 0.590692 2_3:-22377531 Msa0284410:five_prime_UTR
ACTCAAACAATAGAAAACAT+TGG 0.592068 2_3:+22374947 None:intergenic
CAGAAGCTACCCCAGAAACC+CGG 0.593072 2_3:+22378004 None:intergenic
TGATGGGTTTGCGTATTGTA+CGG 0.595165 2_3:-22377018 Msa0284410:five_prime_UTR
GTGTAAGGCAAGGAGGTTAG+CGG 0.596713 2_3:-22377192 Msa0284410:five_prime_UTR
TGATATTGATAAAGCAGTGA+AGG 0.596911 2_3:-22376655 Msa0284410:five_prime_UTR
CCGGGATTTGTGAAGCAATG+AGG 0.597981 2_3:+22377903 None:intergenic
TCCATGGATTATAATCGTGT+GGG 0.599262 2_3:+22376797 None:intergenic
GATCAGTTTGGAAAATCCAA+AGG 0.602613 2_3:-22375109 Msa0284410:CDS
GCTGAGAAGATGATGAGTAA+TGG 0.608252 2_3:-22376945 Msa0284410:five_prime_UTR
AGGGGAGATTTATCCGAGTA+CGG 0.609866 2_3:-22377348 Msa0284410:five_prime_UTR
CATGCTGCACAACCTTTGCA+GGG 0.611718 2_3:-22376589 Msa0284410:five_prime_UTR
ATTCTTTATCCGGGTTTCTG+GGG 0.612683 2_3:-22378013 Msa0284410:five_prime_UTR
CAGGAATAAGGCCTGATGTG+TGG 0.615515 2_3:-22377454 Msa0284410:five_prime_UTR
CGGGCAAGCGAGGTTTGATG+AGG 0.615754 2_3:-22376874 Msa0284410:five_prime_UTR
GATGAGTAATGGTTTGGTGC+CGG 0.616540 2_3:-22376934 Msa0284410:five_prime_UTR
AAATGCAGTATAAATTGGAG+TGG 0.620417 2_3:+22377849 None:intergenic
GTAAATTACCAAATGCCTTG+TGG 0.623294 2_3:+22376243 None:intergenic
ATTCTGATACATTAGTCCGG+TGG 0.624158 2_3:-22376312 Msa0284410:five_prime_UTR
ATGGGTTGTGTAAGGCAAGG+AGG 0.629416 2_3:-22377199 Msa0284410:five_prime_UTR
TTTGGATTACATGAACACGT+TGG 0.636070 2_3:-22376736 Msa0284410:five_prime_UTR
AAGAAAGAGTGTGAATGCGA+AGG 0.637488 2_3:+22377933 None:intergenic
TACCCAGAATACGAACCAGA+TGG 0.639310 2_3:+22378489 None:intergenic
GGGAAACCGGAGGAAGCGAA+TGG 0.642548 2_3:-22377395 Msa0284410:five_prime_UTR
TTAATGGGTTGTGTAAGGCA+AGG 0.651824 2_3:-22377202 Msa0284410:five_prime_UTR
GTGGATGAGATAGAGAAACA+AGG 0.658037 2_3:-22376840 Msa0284410:five_prime_UTR
ACAACACTATTGTTAAGAGG+AGG 0.659996 2_3:-22378038 Msa0284410:five_prime_UTR
TTGGTTTGACTTGCACATTG+TGG 0.660448 2_3:+22377727 None:intergenic
TGTTGTAAGTGATAATGTCA+GGG 0.663495 2_3:+22377654 None:intergenic
GGAGGTTAGCGGATGCAAGG+AGG 0.672556 2_3:-22377181 Msa0284410:five_prime_UTR
AGTTACCGCGATCAAACCAC+CGG 0.674327 2_3:+22376296 None:intergenic
GCGTCGTGGATTTGTTCCGG+AGG 0.677097 2_3:-22377246 Msa0284410:five_prime_UTR
TTAGTCCGGTGGTTTGATCG+CGG 0.677406 2_3:-22376301 Msa0284410:five_prime_UTR
GATTTGTGAAGCAATGAGGG+AGG 0.689065 2_3:+22377907 None:intergenic
AAAATGACACTTCATAACCG+TGG 0.694598 2_3:+22377106 None:intergenic
AGTTGCTTTGTTGAACTTCG+GGG 0.695094 2_3:-22376387 Msa0284410:five_prime_UTR
TGGGTTTGCGTATTGTACGG+TGG 0.697213 2_3:-22377015 Msa0284410:five_prime_UTR
TTGCTGCGTTGGTGAAGACG+GGG 0.699228 2_3:-22376992 Msa0284410:five_prime_UTR
ACTGTTATCATTATGCCACA+AGG 0.716067 2_3:-22376258 Msa0284410:exon
GGCTTCATAGACAAGACCAG+AGG 0.719244 2_3:+22376464 None:intergenic
AGTTAAGTTGAAAATCCGGG+AGG 0.734656 2_3:-22376436 Msa0284410:five_prime_UTR
GAATGCGATTACCTGTACCA+CGG 0.786567 2_3:-22377123 Msa0284410:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTACTACTAATTTATATC+TGG - chr2_3:22375168-22375187 Msa0284410:intron 15.0%
!! TTTACTACTAATTTATATCT+GGG - chr2_3:22375169-22375188 Msa0284410:intron 15.0%
!!! TTTGCTTTTTTTTATCATTT+GGG + chr2_3:22375709-22375728 None:intergenic 15.0%
!!! TTTTAATGCATTGTTATTTT+AGG - chr2_3:22376080-22376099 Msa0284410:intron 15.0%
!! AGTTATAATGTTATGATTAA+TGG - chr2_3:22376178-22376197 Msa0284410:intron 15.0%
!! TTTATTGTTTATAATGAGTT+TGG - chr2_3:22377330-22377349 Msa0284410:five_prime_UTR 15.0%
!!! TAACCTTTTTTTTTTTTTTG+TGG - chr2_3:22378252-22378271 Msa0284410:intron 15.0%
!!! AACCTTTTTTTTTTTTTTGT+GGG - chr2_3:22378253-22378272 Msa0284410:intron 15.0%
!!! AGTTGATTTTCACAAAATTT+GGG - chr2_3:22374978-22374997 Msa0284410:CDS 20.0%
!!! GTCTATTTTAAAAAATTGCA+TGG - chr2_3:22375078-22375097 Msa0284410:CDS 20.0%
!! TTCATTATCATATGACTAAT+GGG + chr2_3:22375129-22375148 None:intergenic 20.0%
!! TTTCATTATCATATGACTAA+TGG + chr2_3:22375130-22375149 None:intergenic 20.0%
!! TTACTACTAATTTATATCTG+GGG - chr2_3:22375170-22375189 Msa0284410:intron 20.0%
!! TGCAAATTCAATATTACTTT+CGG + chr2_3:22375367-22375386 None:intergenic 20.0%
!!! GTTTGCTTTTTTTTATCATT+TGG + chr2_3:22375710-22375729 None:intergenic 20.0%
!! TTTGATTCCATCTATTAAAA+CGG + chr2_3:22375816-22375835 None:intergenic 20.0%
!! TTAATAGATGGAATCAAATT+AGG - chr2_3:22375818-22375837 Msa0284410:intron 20.0%
!!! ATTTTAATTGTTAATAGCTC+TGG - chr2_3:22377482-22377501 Msa0284410:five_prime_UTR 20.0%
!! ATTAAAAATTATGCAGGAAA+TGG + chr2_3:22377685-22377704 None:intergenic 20.0%
!! AAAGGTTATAAAAAAAGACA+GGG + chr2_3:22378240-22378259 None:intergenic 20.0%
!! AAAAGGTTATAAAAAAAGAC+AGG + chr2_3:22378241-22378260 None:intergenic 20.0%
!! TACCCACAAAAAAAAAAAAA+AGG + chr2_3:22378258-22378277 None:intergenic 20.0%
!! TTTCTATTGTTTGAGTAAAT+AGG - chr2_3:22378561-22378580 Msa0284410:five_prime_UTR 20.0%
!!! GAGTTGATTTTCACAAAATT+TGG - chr2_3:22374977-22374996 Msa0284410:CDS 25.0%
! TCATTATCATATGACTAATG+GGG + chr2_3:22375128-22375147 None:intergenic 25.0%
! AAAGACCAAATATTTATGCA+GGG + chr2_3:22375248-22375267 None:intergenic 25.0%
! AATATTGAATTTGCAGATCT+TGG - chr2_3:22375372-22375391 Msa0284410:intron 25.0%
! CATAAGAAGTTTACGTATAA+CGG - chr2_3:22375423-22375442 Msa0284410:intron 25.0%
! AAGTGAAATGCAGTATAAAT+TGG + chr2_3:22375660-22375679 None:intergenic 25.0%
! ACTTACAACACATTAATTGA+TGG - chr2_3:22375860-22375879 Msa0284410:intron 25.0%
!!! ATGCATTGTTATTTTAGGTT+AGG - chr2_3:22376085-22376104 Msa0284410:intron 25.0%
!!! TGCATTGTTATTTTAGGTTA+GGG - chr2_3:22376086-22376105 Msa0284410:intron 25.0%
!! ATTAATGGTTTGTGTAAGAA+TGG - chr2_3:22376193-22376212 Msa0284410:intron 25.0%
! ACTTATAATGCGATGATTAA+TGG - chr2_3:22376283-22376302 Msa0284410:five_prime_UTR 25.0%
! CTTATAATGCGATGATTAAT+GGG - chr2_3:22376284-22376303 Msa0284410:five_prime_UTR 25.0%
!! ACAATGATAAATTTGTTCTG+CGG - chr2_3:22376607-22376626 Msa0284410:five_prime_UTR 25.0%
!! TATAATCCATGGATTATGTA+AGG - chr2_3:22376714-22376733 Msa0284410:five_prime_UTR 25.0%
! TAACTCTATTCTTGATTGTT+TGG - chr2_3:22376813-22376832 Msa0284410:five_prime_UTR 25.0%
! AACTCTATTCTTGATTGTTT+GGG - chr2_3:22376814-22376833 Msa0284410:five_prime_UTR 25.0%
!! GATTTTCAACTTAACTTTTC+TGG + chr2_3:22377061-22377080 None:intergenic 25.0%
!!! GAAAAGTTAAGTTGAAAATC+CGG - chr2_3:22377061-22377080 Msa0284410:five_prime_UTR 25.0%
!!! AAAAGTTAAGTTGAAAATCC+GGG - chr2_3:22377062-22377081 Msa0284410:five_prime_UTR 25.0%
!! CTGTTATATCTTTTGATGTT+TGG - chr2_3:22377297-22377316 Msa0284410:five_prime_UTR 25.0%
! ATATTAGAAACTTGAACCAA+AGG + chr2_3:22377445-22377464 None:intergenic 25.0%
! TTGAGAATATATGAAGTAGA+CGG - chr2_3:22377618-22377637 Msa0284410:five_prime_UTR 25.0%
! TGCACAATTAAAAATTATGC+AGG + chr2_3:22377691-22377710 None:intergenic 25.0%
! CTAGAACATATAGTTTACTT+TGG - chr2_3:22377935-22377954 Msa0284410:five_prime_UTR 25.0%
!! ATAGTTTACTTTGGAGATAT+TGG - chr2_3:22377944-22377963 Msa0284410:five_prime_UTR 25.0%
! TTCAGAAATCAGATTGATAT+GGG + chr2_3:22378054-22378073 None:intergenic 25.0%
! ATTCAGAAATCAGATTGATA+TGG + chr2_3:22378055-22378074 None:intergenic 25.0%
!! TACTTTTATGTTCTCTTTTG+AGG - chr2_3:22378098-22378117 Msa0284410:five_prime_UTR 25.0%
! TTCGATGAAGATCATTATAT+GGG + chr2_3:22378202-22378221 None:intergenic 25.0%
!!! GAAAACATTGGTATTTTTGT+GGG + chr2_3:22378545-22378564 None:intergenic 25.0%
!!! AGAAAACATTGGTATTTTTG+TGG + chr2_3:22378546-22378565 None:intergenic 25.0%
! ACTCAAACAATAGAAAACAT+TGG + chr2_3:22378557-22378576 None:intergenic 25.0%
! TATTGTTTGAGTAAATAGGT+CGG - chr2_3:22378565-22378584 Msa0284410:five_prime_UTR 25.0%
! ATTTTCACAAAATTTGGGTC+AGG - chr2_3:22374983-22375002 Msa0284410:CDS 30.0%
CAAAGACCAAATATTTATGC+AGG + chr2_3:22375249-22375268 None:intergenic 30.0%
TCAAAGACATAGTATGCATT+TGG + chr2_3:22375323-22375342 None:intergenic 30.0%
CGTTATACGTAAACTTCTTA+TGG + chr2_3:22375425-22375444 None:intergenic 30.0%
AAATGCAGTATAAATTGGAG+TGG + chr2_3:22375655-22375674 None:intergenic 30.0%
TCCATCTATTAAAACGGTTT+CGG + chr2_3:22375810-22375829 None:intergenic 30.0%
! TGTTGTAAGTGATAATGTCA+GGG + chr2_3:22375850-22375869 None:intergenic 30.0%
TCCTACAATTCATTAATGTC+TGG - chr2_3:22375965-22375984 Msa0284410:intron 30.0%
ACCAGACATTAATGAATTGT+AGG + chr2_3:22375969-22375988 None:intergenic 30.0%
TTTGATGAAATGCTTCAATC+AGG - chr2_3:22376028-22376047 Msa0284410:intron 30.0%
AAATGCTTCAATCAGGAATA+AGG - chr2_3:22376035-22376054 Msa0284410:intron 30.0%
ATATTATAACTCCACACATC+AGG + chr2_3:22376061-22376080 None:intergenic 30.0%
!!! TTATTTTAGGTTAGGGAAAC+CGG - chr2_3:22376093-22376112 Msa0284410:intron 30.0%
GTATTATAAGAAGCAAGATC+CGG + chr2_3:22376589-22376608 None:intergenic 30.0%
! CAATGATAAATTTGTTCTGC+GGG - chr2_3:22376608-22376627 Msa0284410:five_prime_UTR 30.0%
!!! GTTGGGTTTTGGTTTTAATT+TGG - chr2_3:22376783-22376802 Msa0284410:five_prime_UTR 30.0%
TGATATTGATAAAGCAGTGA+AGG - chr2_3:22376846-22376865 Msa0284410:five_prime_UTR 30.0%
!! AGTGAAGGTTTTTGATGATA+TGG - chr2_3:22376861-22376880 Msa0284410:five_prime_UTR 30.0%
TTGGTTGCTTCTATTAAAGA+TGG - chr2_3:22376964-22376983 Msa0284410:five_prime_UTR 30.0%
!! AAGATGGCTTTAAGATCTTA+AGG - chr2_3:22376980-22376999 Msa0284410:five_prime_UTR 30.0%
!! AGATGGCTTTAAGATCTTAA+GGG - chr2_3:22376981-22377000 Msa0284410:five_prime_UTR 30.0%
ACATCAAAAGATATAACAGC+TGG + chr2_3:22377296-22377315 None:intergenic 30.0%
GGCTTATATATATCATCATG+TGG - chr2_3:22377503-22377522 Msa0284410:five_prime_UTR 30.0%
GGCTTATATATATCATCATG+TGG - chr2_3:22377503-22377522 Msa0284410:five_prime_UTR 30.0%
AATTAAGTAGTAGCAGTACA+TGG - chr2_3:22377659-22377678 Msa0284410:five_prime_UTR 30.0%
!!! CATTTTGATTATGTGTAGTG+TGG - chr2_3:22377772-22377791 Msa0284410:five_prime_UTR 30.0%
! ATCATATCTTTTCCCTTTGT+TGG - chr2_3:22377807-22377826 Msa0284410:five_prime_UTR 30.0%
AAAATTGTTGCACCAACAAA+GGG + chr2_3:22377822-22377841 None:intergenic 30.0%
TCAGAAATCAGATTGATATG+GGG + chr2_3:22378053-22378072 None:intergenic 30.0%
CTTCGATGAAGATCATTATA+TGG + chr2_3:22378203-22378222 None:intergenic 30.0%
TTATAAAAAAAGACAGGGTG+AGG + chr2_3:22378235-22378254 None:intergenic 30.0%
! AGCAGAAGTTTTCTTTACTA+GGG - chr2_3:22378418-22378437 Msa0284410:intron 30.0%
TCTTTCCATAAAGCTTCATT+TGG + chr2_3:22378478-22378497 None:intergenic 30.0%
AACTCGTACGAATTGAGAAA+GGG + chr2_3:22374962-22374981 None:intergenic 35.0%
CTATCTATGATCCATTCTTC+AGG - chr2_3:22375050-22375069 Msa0284410:CDS 35.0%
ATAGACACATACCTGAAGAA+TGG + chr2_3:22375064-22375083 None:intergenic 35.0%
CTCGGTTCTCAGATAAAAAT+AGG + chr2_3:22375196-22375215 None:intergenic 35.0%
! AACCGAGCTTCCAATTTTAT+AGG - chr2_3:22375209-22375228 Msa0284410:intron 35.0%
! ACCGAGCTTCCAATTTTATA+GGG - chr2_3:22375210-22375229 Msa0284410:intron 35.0%
TCCCTATAAAATTGGAAGCT+CGG + chr2_3:22375214-22375233 None:intergenic 35.0%
! AGCTTCCAATTTTATAGGGA+CGG - chr2_3:22375214-22375233 Msa0284410:intron 35.0%
AATATTTATGCAGGGAAGCA+GGG + chr2_3:22375240-22375259 None:intergenic 35.0%
AAATATTTATGCAGGGAAGC+AGG + chr2_3:22375241-22375260 None:intergenic 35.0%
TGCTTCCCTGCATAAATATT+TGG - chr2_3:22375240-22375259 Msa0284410:intron 35.0%
ACCACAACACTATTGTTAAG+AGG - chr2_3:22375460-22375479 Msa0284410:intron 35.0%
TCCTCTTAACAATAGTGTTG+TGG + chr2_3:22375464-22375483 None:intergenic 35.0%
ACAACACTATTGTTAAGAGG+AGG - chr2_3:22375463-22375482 Msa0284410:intron 35.0%
AGAGGAGGAAATTCTTTATC+CGG - chr2_3:22375478-22375497 Msa0284410:intron 35.0%
AAATTCTTTATCCGGGTTTC+TGG - chr2_3:22375486-22375505 Msa0284410:intron 35.0%
AATTCTTTATCCGGGTTTCT+GGG - chr2_3:22375487-22375506 Msa0284410:intron 35.0%
TATTAAAACGGTTTCGGCTT+TGG + chr2_3:22375804-22375823 None:intergenic 35.0%
! GTGTTGTAAGTGATAATGTC+AGG + chr2_3:22375851-22375870 None:intergenic 35.0%
GAATTGTAGGAAACAACATC+AGG + chr2_3:22375956-22375975 None:intergenic 35.0%
CAATTCATTAATGTCTGGTG+CGG - chr2_3:22375970-22375989 Msa0284410:intron 35.0%
! GAAGCATTTCATCAAACAGA+TGG + chr2_3:22376024-22376043 None:intergenic 35.0%
TTTCGGAATATTGTTGAGAG+AGG - chr2_3:22376133-22376152 Msa0284410:intron 35.0%
TTCGGAATATTGTTGAGAGA+GGG - chr2_3:22376134-22376153 Msa0284410:intron 35.0%
! ATAACGCGTTGATGTTGTTT+AGG - chr2_3:22376224-22376243 Msa0284410:intron 35.0%
GCATTATAAGTCAAAACCTC+CGG + chr2_3:22376274-22376293 None:intergenic 35.0%
!! GATGATTAATGGGTTGTGTA+AGG - chr2_3:22376294-22376313 Msa0284410:five_prime_UTR 35.0%
!! CTGGATGAGTTTTGTGATTT+TGG - chr2_3:22376346-22376365 Msa0284410:five_prime_UTR 35.0%
AAAATGACACTTCATAACCG+TGG + chr2_3:22376398-22376417 None:intergenic 35.0%
!!! CGGTTATGAAGTGTCATTTT+AGG - chr2_3:22376398-22376417 Msa0284410:five_prime_UTR 35.0%
!!! ATGAAGTGTCATTTTAGGTG+TGG - chr2_3:22376403-22376422 Msa0284410:five_prime_UTR 35.0%
!!! TGAAGTGTCATTTTAGGTGT+GGG - chr2_3:22376404-22376423 Msa0284410:five_prime_UTR 35.0%
! AGGAAAGGTTTTACGTTTGA+TGG - chr2_3:22376466-22376485 Msa0284410:five_prime_UTR 35.0%
! GGAAAGGTTTTACGTTTGAT+GGG - chr2_3:22376467-22376486 Msa0284410:five_prime_UTR 35.0%
GAAGATGATGAGTAATGGTT+TGG - chr2_3:22376561-22376580 Msa0284410:five_prime_UTR 35.0%
! TCCATGGATTATAATCGTGT+GGG + chr2_3:22376707-22376726 None:intergenic 35.0%
! ATCCATGGATTATAATCGTG+TGG + chr2_3:22376708-22376727 None:intergenic 35.0%
! ATCCATGGATTATGTAAGGA+TGG - chr2_3:22376718-22376737 Msa0284410:five_prime_UTR 35.0%
CATGTAATCCAAATGCTTCA+TGG + chr2_3:22376758-22376777 None:intergenic 35.0%
TTTGGATTACATGAACACGT+TGG - chr2_3:22376765-22376784 Msa0284410:five_prime_UTR 35.0%
TTGGATTACATGAACACGTT+GGG - chr2_3:22376766-22376785 Msa0284410:five_prime_UTR 35.0%
!!! GGGTTTTGGTTTTAATTTGG+TGG - chr2_3:22376786-22376805 Msa0284410:five_prime_UTR 35.0%
!! GAAGGTTTTTGATGATATGG+AGG - chr2_3:22376864-22376883 Msa0284410:five_prime_UTR 35.0%
AATAGAAGCAACCAAAAGCT+TGG + chr2_3:22376959-22376978 None:intergenic 35.0%
ACTCAAAGAGCTGTTATTGA+TGG - chr2_3:22377006-22377025 Msa0284410:five_prime_UTR 35.0%
! GAAGTTGCTTTGTTGAACTT+CGG - chr2_3:22377112-22377131 Msa0284410:five_prime_UTR 35.0%
! AAGTTGCTTTGTTGAACTTC+GGG - chr2_3:22377113-22377132 Msa0284410:five_prime_UTR 35.0%
CTGATTCTGATACATTAGTC+CGG - chr2_3:22377186-22377205 Msa0284410:five_prime_UTR 35.0%
ACTGTTATCATTATGCCACA+AGG - chr2_3:22377243-22377262 Msa0284410:five_prime_UTR 35.0%
GTAAATTACCAAATGCCTTG+TGG + chr2_3:22377261-22377280 None:intergenic 35.0%
GAAAATTGTTGCACCAACAA+AGG + chr2_3:22377823-22377842 None:intergenic 35.0%
CATGAAGGGGAAAAGTTTAA+CGG + chr2_3:22377851-22377870 None:intergenic 35.0%
AAAGCTAGCATGTACATGAA+GGG + chr2_3:22377865-22377884 None:intergenic 35.0%
TAAAGCTAGCATGTACATGA+AGG + chr2_3:22377866-22377885 None:intergenic 35.0%
TCCATTCATTACGATCAGTT+TGG - chr2_3:22378380-22378399 Msa0284410:intron 35.0%
TCCAAACTGATCGTAATGAA+TGG + chr2_3:22378384-22378403 None:intergenic 35.0%
GATCAGTTTGGAAAATCCAA+AGG - chr2_3:22378392-22378411 Msa0284410:intron 35.0%
! CAGCAGAAGTTTTCTTTACT+AGG - chr2_3:22378417-22378436 Msa0284410:intron 35.0%
TGCAACCAAATGAAGCTTTA+TGG - chr2_3:22378470-22378489 Msa0284410:five_prime_UTR 35.0%
ACATTGCAAATTGAGCTTGT+TGG - chr2_3:22378497-22378516 Msa0284410:five_prime_UTR 35.0%
CAACTCGTACGAATTGAGAA+AGG + chr2_3:22374963-22374982 None:intergenic 40.0%
! ATCCATCTGGTTCGTATTCT+GGG - chr2_3:22375010-22375029 Msa0284410:CDS 40.0%
ACTAATGGGGATTCAGCATA+TGG + chr2_3:22375115-22375134 None:intergenic 40.0%
AGTGACAGAATCACTGAGTT+TGG - chr2_3:22375282-22375301 Msa0284410:intron 40.0%
GAGGAGGAAATTCTTTATCC+GGG - chr2_3:22375479-22375498 Msa0284410:intron 40.0%
ATTCTTTATCCGGGTTTCTG+GGG - chr2_3:22375488-22375507 Msa0284410:intron 40.0%
! AAGAAAGAGTGTGAATGCGA+AGG + chr2_3:22375571-22375590 None:intergenic 40.0%
! TGGTTTCGTGTTGTTGAATC+CGG + chr2_3:22375635-22375654 None:intergenic 40.0%
!! CGTTGATAATCGAGTGATCA+TGG + chr2_3:22375732-22375751 None:intergenic 40.0%
! TGACTTGCACATTGTGGATA+TGG + chr2_3:22375771-22375790 None:intergenic 40.0%
!! TTGGTTTGACTTGCACATTG+TGG + chr2_3:22375777-22375796 None:intergenic 40.0%
!! GCCGAAACCGTTTTAATAGA+TGG - chr2_3:22375806-22375825 Msa0284410:intron 40.0%
CTCAACAGAATGAAAGAAGC+TGG - chr2_3:22375923-22375942 Msa0284410:intron 40.0%
! AGGAAGCGAATGGTGTTTTT+CGG - chr2_3:22376116-22376135 Msa0284410:intron 40.0%
TCGGAATATTGTTGAGAGAG+GGG - chr2_3:22376135-22376154 Msa0284410:intron 40.0%
ACATTATAACTCGCCGTACT+CGG + chr2_3:22376169-22376188 None:intergenic 40.0%
!! TTAATGGGTTGTGTAAGGCA+AGG - chr2_3:22376299-22376318 Msa0284410:five_prime_UTR 40.0%
!! TGATGGGTTTGCGTATTGTA+CGG - chr2_3:22376483-22376502 Msa0284410:five_prime_UTR 40.0%
GCTGAGAAGATGATGAGTAA+TGG - chr2_3:22376556-22376575 Msa0284410:five_prime_UTR 40.0%
GTGGATGAGATAGAGAAACA+AGG - chr2_3:22376661-22376680 Msa0284410:five_prime_UTR 40.0%
ACCCACACGATTATAATCCA+TGG - chr2_3:22376703-22376722 Msa0284410:five_prime_UTR 40.0%
TGCCATCCTTACATAATCCA+TGG + chr2_3:22376723-22376742 None:intergenic 40.0%
! TGTAAGGATGGCAATTTTGC+AGG - chr2_3:22376730-22376749 Msa0284410:five_prime_UTR 40.0%
! TACATGAACACGTTGGGTTT+TGG - chr2_3:22376772-22376791 Msa0284410:five_prime_UTR 40.0%
CTTGATTGTTTGGGTAAAGC+TGG - chr2_3:22376823-22376842 Msa0284410:five_prime_UTR 40.0%
CCAAAAGCTTGGAAGCAATT+CGG + chr2_3:22376948-22376967 None:intergenic 40.0%
!! AGTTAAGTTGAAAATCCGGG+AGG - chr2_3:22377065-22377084 Msa0284410:five_prime_UTR 40.0%
! AGTTGCTTTGTTGAACTTCG+GGG - chr2_3:22377114-22377133 Msa0284410:five_prime_UTR 40.0%
ATTCTGATACATTAGTCCGG+TGG - chr2_3:22377189-22377208 Msa0284410:five_prime_UTR 40.0%
! TCATTATGCCACAAGGCATT+TGG - chr2_3:22377250-22377269 Msa0284410:five_prime_UTR 40.0%
AGCTTGACGATTAATAGCTC+TGG - chr2_3:22377532-22377551 Msa0284410:five_prime_UTR 40.0%
AAGCTAGCATGTACATGAAG+GGG + chr2_3:22377864-22377883 None:intergenic 40.0%
! TCTTGCTACTTGTAGCTGTT+TGG - chr2_3:22377976-22377995 Msa0284410:five_prime_UTR 40.0%
TCATTATATGGGCGTAGCAT+TGG + chr2_3:22378191-22378210 None:intergenic 40.0%
CAGAGAACAACAGCTGTAAA+AGG + chr2_3:22378337-22378356 None:intergenic 40.0%
! GTTCTCTGAAGAAGTTGAGT+TGG - chr2_3:22378349-22378368 Msa0284410:intron 40.0%
!! TCTGAAGAAGTTGAGTTGGA+AGG - chr2_3:22378353-22378372 Msa0284410:intron 40.0%
!! CTGAAGAAGTTGAGTTGGAA+GGG - chr2_3:22378354-22378373 Msa0284410:intron 40.0%
GAAAACTTCTGCTGTTCCTT+TGG + chr2_3:22378411-22378430 None:intergenic 40.0%
!! TGAGCTTGTTGGAACAAGAT+TGG - chr2_3:22378508-22378527 Msa0284410:five_prime_UTR 40.0%
!! TTGGTATTTTTGTGGGAGCA+GGG + chr2_3:22378538-22378557 None:intergenic 40.0%
!! ATTGGTATTTTTGTGGGAGC+AGG + chr2_3:22378539-22378558 None:intergenic 40.0%
! CATCCATCTGGTTCGTATTC+TGG - chr2_3:22375009-22375028 Msa0284410:CDS 45.0%
TACCCAGAATACGAACCAGA+TGG + chr2_3:22375015-22375034 None:intergenic 45.0%
AGTGTTGTGGTGAGATCTGT+TGG + chr2_3:22375451-22375470 None:intergenic 45.0%
GATTTGTGAAGCAATGAGGG+AGG + chr2_3:22375597-22375616 None:intergenic 45.0%
CGGGATTTGTGAAGCAATGA+GGG + chr2_3:22375600-22375619 None:intergenic 45.0%
CCTCATTGCTTCACAAATCC+CGG - chr2_3:22375598-22375617 Msa0284410:intron 45.0%
CTCATTGCTTCACAAATCCC+GGG - chr2_3:22375599-22375618 Msa0284410:intron 45.0%
! TCGTGTTGTTGAATCCGGTT+GGG + chr2_3:22375630-22375649 None:intergenic 45.0%
! TTCGTGTTGTTGAATCCGGT+TGG + chr2_3:22375631-22375650 None:intergenic 45.0%
!!! TTTTAGGTTAGGGAAACCGG+AGG - chr2_3:22376096-22376115 Msa0284410:intron 45.0%
AAAACACCATTCGCTTCCTC+CGG + chr2_3:22376115-22376134 None:intergenic 45.0%
AGGGGAGATTTATCCGAGTA+CGG - chr2_3:22376153-22376172 Msa0284410:intron 45.0%
TTTAGGAATTTGCAGCGTCG+TGG - chr2_3:22376241-22376260 Msa0284410:intron 45.0%
GTGGTACAGGTAATCGCATT+CGG + chr2_3:22376379-22376398 None:intergenic 45.0%
GAATGCGATTACCTGTACCA+CGG - chr2_3:22376378-22376397 Msa0284410:five_prime_UTR 45.0%
ACACTTCATAACCGTGGTAC+AGG + chr2_3:22376392-22376411 None:intergenic 45.0%
!!! AGTGTCATTTTAGGTGTGGG+AGG - chr2_3:22376407-22376426 Msa0284410:five_prime_UTR 45.0%
! GCAAGGGTTGGAGATTTTGT+CGG - chr2_3:22376435-22376454 Msa0284410:five_prime_UTR 45.0%
! CAAGGGTTGGAGATTTTGTC+GGG - chr2_3:22376436-22376455 Msa0284410:five_prime_UTR 45.0%
! AAGGGTTGGAGATTTTGTCG+GGG - chr2_3:22376437-22376456 Msa0284410:five_prime_UTR 45.0%
GACGGGGAAGATTGAAAAAG+CGG - chr2_3:22376525-22376544 Msa0284410:five_prime_UTR 45.0%
!! GATGAGTAATGGTTTGGTGC+CGG - chr2_3:22376567-22376586 Msa0284410:five_prime_UTR 45.0%
!! GTTTGATGAGGTGTTGAGGT+TGG - chr2_3:22376639-22376658 Msa0284410:five_prime_UTR 45.0%
! CCGAATTGCTTCCAAGCTTT+TGG - chr2_3:22376945-22376964 Msa0284410:five_prime_UTR 45.0%
! ATTGATGGTCTCACTACCTC+TGG - chr2_3:22377021-22377040 Msa0284410:five_prime_UTR 45.0%
TCGCGGTAACTGTCATTCAA+AGG - chr2_3:22377217-22377236 Msa0284410:five_prime_UTR 45.0%
CGCGGTAACTGTCATTCAAA+GGG - chr2_3:22377218-22377237 Msa0284410:five_prime_UTR 45.0%
GAACCAAAGGCTCAACTGAA+GGG + chr2_3:22377432-22377451 None:intergenic 45.0%
TGAACCAAAGGCTCAACTGA+AGG + chr2_3:22377433-22377452 None:intergenic 45.0%
AAGGGGAAAAGTTTAACGGC+AGG + chr2_3:22377847-22377866 None:intergenic 45.0%
!! TGGTATTTTTGTGGGAGCAG+GGG + chr2_3:22378537-22378556 None:intergenic 45.0%
TGGGTCAGGTTTCATCCATC+TGG - chr2_3:22374997-22375016 Msa0284410:CDS 50.0%
CAGGGCCGTCCCTATAAAAT+TGG + chr2_3:22375222-22375241 None:intergenic 50.0%
! TCTGGGGTAGCTTCTGATAG+AGG - chr2_3:22375504-22375523 Msa0284410:intron 50.0%
! CTTTCTAGCAGTGCATCGCA+CGG - chr2_3:22375531-22375550 Msa0284410:intron 50.0%
! TTTCTAGCAGTGCATCGCAC+GGG - chr2_3:22375532-22375551 Msa0284410:intron 50.0%
GAGTGTGAATGCGAAGGACT+AGG + chr2_3:22375565-22375584 None:intergenic 50.0%
TTGTGAAGCAATGAGGGAGG+AGG + chr2_3:22375594-22375613 None:intergenic 50.0%
CCGGGATTTGTGAAGCAATG+AGG + chr2_3:22375601-22375620 None:intergenic 50.0%
GTTGTTGAATCCGGTTGGGT+TGG + chr2_3:22375626-22375645 None:intergenic 50.0%
CAGGAATAAGGCCTGATGTG+TGG - chr2_3:22376047-22376066 Msa0284410:intron 50.0%
! ATGGGTTGTGTAAGGCAAGG+AGG - chr2_3:22376302-22376321 Msa0284410:five_prime_UTR 50.0%
GTGTAAGGCAAGGAGGTTAG+CGG - chr2_3:22376309-22376328 Msa0284410:five_prime_UTR 50.0%
! TGGAGATTTTGTCGGGGATG+AGG - chr2_3:22376443-22376462 Msa0284410:five_prime_UTR 50.0%
! AGATTTTGTCGGGGATGAGG+AGG - chr2_3:22376446-22376465 Msa0284410:five_prime_UTR 50.0%
TGGGTTTGCGTATTGTACGG+TGG - chr2_3:22376486-22376505 Msa0284410:five_prime_UTR 50.0%
!! CGAGGTTTGATGAGGTGTTG+AGG - chr2_3:22376635-22376654 Msa0284410:five_prime_UTR 50.0%
!! TGATGAGGTGTTGAGGTTGG+TGG - chr2_3:22376642-22376661 Msa0284410:five_prime_UTR 50.0%
! TGCAGGTGCCATGAAGCATT+TGG - chr2_3:22376747-22376766 Msa0284410:five_prime_UTR 50.0%
TCATGCTGCACAACCTTTGC+AGG - chr2_3:22376911-22376930 Msa0284410:five_prime_UTR 50.0%
CATGCTGCACAACCTTTGCA+GGG - chr2_3:22376912-22376931 Msa0284410:five_prime_UTR 50.0%
GGAACTTCTTAGCCCTGCAA+AGG + chr2_3:22376927-22376946 None:intergenic 50.0%
GGCTTCATAGACAAGACCAG+AGG + chr2_3:22377040-22377059 None:intergenic 50.0%
TTAGTCCGGTGGTTTGATCG+CGG - chr2_3:22377200-22377219 Msa0284410:five_prime_UTR 50.0%
AGTTACCGCGATCAAACCAC+CGG + chr2_3:22377208-22377227 None:intergenic 50.0%
GATCCCTTCAGTTGAGCCTT+TGG - chr2_3:22377426-22377445 Msa0284410:five_prime_UTR 50.0%
!! TAGCGGCGAGTTTGGTGTTT+GGG + chr2_3:22378165-22378184 None:intergenic 50.0%
!! TTAGCGGCGAGTTTGGTGTT+TGG + chr2_3:22378166-22378185 None:intergenic 50.0%
!! ATTGGTGTTAGCGGCGAGTT+TGG + chr2_3:22378173-22378192 None:intergenic 50.0%
CAGAAGCTACCCCAGAAACC+CGG + chr2_3:22375500-22375519 None:intergenic 55.0%
CGTGCGATGCACTGCTAGAA+AGG + chr2_3:22375533-22375552 None:intergenic 55.0%
! CGGTTTCGGCTTTGGCGATT+TGG + chr2_3:22375796-22375815 None:intergenic 55.0%
! GCAGCGTCGTGGATTTGTTC+CGG - chr2_3:22376252-22376271 Msa0284410:exon 55.0%
! CAAGGAGGTTAGCGGATGCA+AGG - chr2_3:22376317-22376336 Msa0284410:five_prime_UTR 55.0%
! GAGGTTAGCGGATGCAAGGA+GGG - chr2_3:22376321-22376340 Msa0284410:five_prime_UTR 55.0%
AGGTGTGGGAGGTTGAAGCA+AGG - chr2_3:22376418-22376437 Msa0284410:five_prime_UTR 55.0%
GGTGTGGGAGGTTGAAGCAA+GGG - chr2_3:22376419-22376438 Msa0284410:five_prime_UTR 55.0%
TGGGAGGTTGAAGCAAGGGT+TGG - chr2_3:22376423-22376442 Msa0284410:five_prime_UTR 55.0%
TTGTCGGGGATGAGGAGGAA+AGG - chr2_3:22376451-22376470 Msa0284410:five_prime_UTR 55.0%
TTGTACGGTGGTTGCTGCGT+TGG - chr2_3:22376498-22376517 Msa0284410:five_prime_UTR 55.0%
! GGTTGCTGCGTTGGTGAAGA+CGG - chr2_3:22376507-22376526 Msa0284410:five_prime_UTR 55.0%
! GTTGCTGCGTTGGTGAAGAC+GGG - chr2_3:22376508-22376527 Msa0284410:five_prime_UTR 55.0%
! TTGCTGCGTTGGTGAAGACG+GGG - chr2_3:22376509-22376528 Msa0284410:five_prime_UTR 55.0%
ATTTGTTCTGCGGGCAAGCG+AGG - chr2_3:22376617-22376636 Msa0284410:five_prime_UTR 55.0%
GAAAATCCGGGAGGCTCGAT+TGG - chr2_3:22377074-22377093 Msa0284410:five_prime_UTR 55.0%
AATGCACCAATCGAGCCTCC+CGG + chr2_3:22377083-22377102 None:intergenic 55.0%
!! GGGCGTAGCATTGGTGTTAG+CGG + chr2_3:22378182-22378201 None:intergenic 55.0%
TCTGATGCTCTAGCAGCCCT+CGG - chr2_3:22378443-22378462 Msa0284410:intron 55.0%
CATTTGGTTGCACCTCCCGA+GGG + chr2_3:22378462-22378481 None:intergenic 55.0%
TCATTTGGTTGCACCTCCCG+AGG + chr2_3:22378463-22378482 None:intergenic 55.0%
AATCCCGGGTCCAACCCAAC+CGG - chr2_3:22375613-22375632 Msa0284410:intron 60.0%
!! AATCCGGTTGGGTTGGACCC+GGG + chr2_3:22375619-22375638 None:intergenic 60.0%
!! GAATCCGGTTGGGTTGGACC+CGG + chr2_3:22375620-22375639 None:intergenic 60.0%
GGGAAACCGGAGGAAGCGAA+TGG - chr2_3:22376106-22376125 Msa0284410:intron 60.0%
! GCGTCGTGGATTTGTTCCGG+AGG - chr2_3:22376255-22376274 Msa0284410:exon 60.0%
! GGAGGTTAGCGGATGCAAGG+AGG - chr2_3:22376320-22376339 Msa0284410:five_prime_UTR 60.0%
CGGGCAAGCGAGGTTTGATG+AGG - chr2_3:22376627-22376646 Msa0284410:five_prime_UTR 60.0%
CTGATGCTCTAGCAGCCCTC+GGG - chr2_3:22378444-22378463 Msa0284410:intron 60.0%
! AGCGGATGCAAGGAGGGTGC+TGG - chr2_3:22376327-22376346 Msa0284410:five_prime_UTR 65.0%
ATGCTCTAGCAGCCCTCGGG+AGG - chr2_3:22378447-22378466 Msa0284410:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 22374932 22378591 22374932 ID=Msa0284410;Name=Msa0284410
chr2_3 mRNA 22374932 22378591 22374932 ID=Msa0284410-mRNA-1;Parent=Msa0284410;Name=Msa0284410-mRNA-1;_AED=0.11;_eAED=0.11;_QI=2007|0.5|0.4|1|0|0.2|5|0|81
chr2_3 exon 22374932 22374940 22374932 ID=Msa0284410-mRNA-1:exon:8760;Parent=Msa0284410-mRNA-1
chr2_3 exon 22374955 22375148 22374955 ID=Msa0284410-mRNA-1:exon:8759;Parent=Msa0284410-mRNA-1
chr2_3 exon 22375157 22375179 22375157 ID=Msa0284410-mRNA-1:exon:8758;Parent=Msa0284410-mRNA-1
chr2_3 exon 22376252 22378135 22376252 ID=Msa0284410-mRNA-1:exon:8757;Parent=Msa0284410-mRNA-1
chr2_3 exon 22378452 22378591 22378452 ID=Msa0284410-mRNA-1:exon:8756;Parent=Msa0284410-mRNA-1
chr2_3 five_prime_UTR 22378452 22378591 22378452 ID=Msa0284410-mRNA-1:five_prime_utr;Parent=Msa0284410-mRNA-1
chr2_3 five_prime_UTR 22376269 22378135 22376269 ID=Msa0284410-mRNA-1:five_prime_utr;Parent=Msa0284410-mRNA-1
chr2_3 CDS 22376252 22376268 22376252 ID=Msa0284410-mRNA-1:cds;Parent=Msa0284410-mRNA-1
chr2_3 CDS 22375157 22375179 22375157 ID=Msa0284410-mRNA-1:cds;Parent=Msa0284410-mRNA-1
chr2_3 CDS 22374955 22375148 22374955 ID=Msa0284410-mRNA-1:cds;Parent=Msa0284410-mRNA-1
chr2_3 CDS 22374932 22374940 22374932 ID=Msa0284410-mRNA-1:cds;Parent=Msa0284410-mRNA-1
Gene Sequence

>Msa0284410

ATGCCACAAGGCATTTGCTGTTGTTCTCTGAAGAAGTTGAGGTATTCCATTCATTACGATCAGTTTGGAAAATCCAAAGGAACAGCAGAAGTTTTCTTTACTAGGGAGTCTGATGCTCTAGCAGCCCTCGGGAGGTGCAACCAAATGAAGCTTTATGGAAAGACATTGCAAATTGAGCTTGTTGGAACAAGATTGGTTACCCCTGCTCCCACAAAAATACCAATGTTTTCTATTGTCGGAAAA

Protein sequence

>Msa0284410

MPQGICCCSLKKLRYSIHYDQFGKSKGTAEVFFTRESDALAALGRCNQMKLYGKTLQIELVGTRLVTPAPTKIPMFSIVGK