Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547170 | KAG4979830.1 | 92.105 | 152 | 12 | 0 | 1 | 152 | 652 | 803 | 1.46e-93 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547170 | sp|Q9SE43|REV_ARATH | 66.842 | 190 | 25 | 2 | 1 | 152 | 653 | 842 | 1.68e-77 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547170 | A0A072UK13 | 80.108 | 186 | 3 | 1 | 1 | 152 | 661 | 846 | 6.93e-93 | 296 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0547170 | 0.807567 | 4.745724e-50 | -8.615850e-47 |
| Msa0001940 | Msa0547170 | 0.805892 | 1.071954e-49 | -8.615850e-47 |
| Msa0009180 | Msa0547170 | 0.808179 | 3.516670e-50 | -8.615850e-47 |
| Msa0031340 | Msa0547170 | 0.805253 | 1.459634e-49 | -8.615850e-47 |
| Msa0051020 | Msa0547170 | 0.804543 | 2.053938e-49 | -8.615850e-47 |
| Msa0052680 | Msa0547170 | 0.806045 | 9.951061e-50 | -8.615850e-47 |
| Msa0052730 | Msa0547170 | 0.813509 | 2.469244e-51 | -8.615850e-47 |
| Msa0061340 | Msa0547170 | 0.809088 | 2.249289e-50 | -8.615850e-47 |
| Msa0079380 | Msa0547170 | 0.803228 | 3.852696e-49 | -8.615850e-47 |
| Msa0081520 | Msa0547170 | 0.803660 | 3.136073e-49 | -8.615850e-47 |
| Msa0084080 | Msa0547170 | 0.808831 | 2.552149e-50 | -8.615850e-47 |
| Msa0084380 | Msa0547170 | 0.827967 | 1.167349e-54 | -8.615850e-47 |
| Msa0090360 | Msa0547170 | 0.819467 | 1.144104e-52 | -8.615850e-47 |
| Msa0101270 | Msa0547170 | 0.819763 | 9.792270e-53 | -8.615850e-47 |
| Msa0106620 | Msa0547170 | 0.806945 | 6.428014e-50 | -8.615850e-47 |
| Msa0106710 | Msa0547170 | 0.815618 | 8.428154e-52 | -8.615850e-47 |
| Msa0137840 | Msa0547170 | 0.808189 | 3.499704e-50 | -8.615850e-47 |
| Msa0150860 | Msa0547170 | 0.805829 | 1.105151e-49 | -8.615850e-47 |
| Msa0152400 | Msa0547170 | 0.816310 | 5.907215e-52 | -8.615850e-47 |
| Msa0154440 | Msa0547170 | 0.802827 | 4.664182e-49 | -8.615850e-47 |
| Msa0159930 | Msa0547170 | 0.804434 | 2.164644e-49 | -8.615850e-47 |
| Msa0168500 | Msa0547170 | 0.804584 | 2.013715e-49 | -8.615850e-47 |
| Msa0170570 | Msa0547170 | 0.813004 | 3.187799e-51 | -8.615850e-47 |
| Msa0173690 | Msa0547170 | 0.818001 | 2.461961e-52 | -8.615850e-47 |
| Msa0173890 | Msa0547170 | 0.800121 | 1.672033e-48 | -8.615850e-47 |
| Msa0184040 | Msa0547170 | 0.817546 | 3.118526e-52 | -8.615850e-47 |
| Msa0211150 | Msa0547170 | 0.859608 | 3.675826e-63 | -8.615850e-47 |
| Msa0212990 | Msa0547170 | 0.803627 | 3.184794e-49 | -8.615850e-47 |
| Msa0218810 | Msa0547170 | 0.817277 | 3.583834e-52 | -8.615850e-47 |
| Msa0219590 | Msa0547170 | 0.812763 | 3.599854e-51 | -8.615850e-47 |
| Msa0221000 | Msa0547170 | 0.810370 | 1.192127e-50 | -8.615850e-47 |
| Msa0221470 | Msa0547170 | 0.806558 | 7.758428e-50 | -8.615850e-47 |
| Msa0225100 | Msa0547170 | 0.824249 | 8.942001e-54 | -8.615850e-47 |
| Msa0237210 | Msa0547170 | 0.806281 | 8.875758e-50 | -8.615850e-47 |
| Msa0365100 | Msa0547170 | 0.846065 | 2.745175e-59 | -8.615850e-47 |
| Msa0367870 | Msa0547170 | 0.814186 | 1.751408e-51 | -8.615850e-47 |
| Msa0376630 | Msa0547170 | 0.836079 | 1.154316e-56 | -8.615850e-47 |
| Msa0378720 | Msa0547170 | 0.832739 | 7.960749e-56 | -8.615850e-47 |
| Msa0393080 | Msa0547170 | 0.803863 | 2.845618e-49 | -8.615850e-47 |
| Msa0406770 | Msa0547170 | 0.820642 | 6.156414e-53 | -8.615850e-47 |
| Msa0410650 | Msa0547170 | 0.819621 | 1.055017e-52 | -8.615850e-47 |
| Msa0425170 | Msa0547170 | 0.800103 | 1.686054e-48 | -8.615850e-47 |
| Msa0427100 | Msa0547170 | 0.826124 | 3.222520e-54 | -8.615850e-47 |
| Msa0427120 | Msa0547170 | 0.826398 | 2.772627e-54 | -8.615850e-47 |
| Msa0440750 | Msa0547170 | 0.803947 | 2.732982e-49 | -8.615850e-47 |
| Msa0452710 | Msa0547170 | 0.828913 | 6.902896e-55 | -8.615850e-47 |
| Msa0454360 | Msa0547170 | 0.806455 | 8.157628e-50 | -8.615850e-47 |
| Msa0460590 | Msa0547170 | 0.816174 | 6.336397e-52 | -8.615850e-47 |
| Msa0464680 | Msa0547170 | 0.808234 | 3.423759e-50 | -8.615850e-47 |
| Msa0468270 | Msa0547170 | 0.811669 | 6.237296e-51 | -8.615850e-47 |
| Msa0471670 | Msa0547170 | 0.819177 | 1.331567e-52 | -8.615850e-47 |
| Msa0473500 | Msa0547170 | 0.806314 | 8.735337e-50 | -8.615850e-47 |
| Msa0479170 | Msa0547170 | 0.849944 | 2.335383e-60 | -8.615850e-47 |
| Msa0481530 | Msa0547170 | 0.827447 | 1.556685e-54 | -8.615850e-47 |
| Msa0240900 | Msa0547170 | 0.810281 | 1.246381e-50 | -8.615850e-47 |
| Msa0241140 | Msa0547170 | 0.815061 | 1.121162e-51 | -8.615850e-47 |
| Msa0244640 | Msa0547170 | 0.815538 | 8.783633e-52 | -8.615850e-47 |
| Msa0249860 | Msa0547170 | 0.822523 | 2.263381e-53 | -8.615850e-47 |
| Msa0254790 | Msa0547170 | 0.809629 | 1.721636e-50 | -8.615850e-47 |
| Msa0258310 | Msa0547170 | 0.865750 | 4.707566e-65 | -8.615850e-47 |
| Msa0259430 | Msa0547170 | 0.801751 | 7.768205e-49 | -8.615850e-47 |
| Msa0259500 | Msa0547170 | 0.808468 | 3.051833e-50 | -8.615850e-47 |
| Msa0266180 | Msa0547170 | 0.814862 | 1.240886e-51 | -8.615850e-47 |
| Msa0266350 | Msa0547170 | 0.813432 | 2.566995e-51 | -8.615850e-47 |
| Msa0267920 | Msa0547170 | 0.842015 | 3.346575e-58 | -8.615850e-47 |
| Msa0272770 | Msa0547170 | 0.800251 | 1.572940e-48 | -8.615850e-47 |
| Msa0274980 | Msa0547170 | 0.807060 | 6.077034e-50 | -8.615850e-47 |
| Msa0283330 | Msa0547170 | 0.802181 | 6.335954e-49 | -8.615850e-47 |
| Msa0287740 | Msa0547170 | 0.831622 | 1.504074e-55 | -8.615850e-47 |
| Msa0297790 | Msa0547170 | 0.819495 | 1.127008e-52 | -8.615850e-47 |
| Msa0300270 | Msa0547170 | 0.825431 | 4.704502e-54 | -8.615850e-47 |
| Msa0300320 | Msa0547170 | 0.823550 | 1.303704e-53 | -8.615850e-47 |
| Msa0305610 | Msa0547170 | 0.800450 | 1.432811e-48 | -8.615850e-47 |
| Msa0315690 | Msa0547170 | 0.821296 | 4.354978e-53 | -8.615850e-47 |
| Msa0317970 | Msa0547170 | 0.805948 | 1.043431e-49 | -8.615850e-47 |
| Msa0318980 | Msa0547170 | 0.804928 | 1.706819e-49 | -8.615850e-47 |
| Msa0321620 | Msa0547170 | 0.806446 | 8.192377e-50 | -8.615850e-47 |
| Msa0335800 | Msa0547170 | 0.810975 | 8.823968e-51 | -8.615850e-47 |
| Msa0337700 | Msa0547170 | 0.808713 | 2.704814e-50 | -8.615850e-47 |
| Msa0341540 | Msa0547170 | 0.802461 | 5.548103e-49 | -8.615850e-47 |
| Msa0341690 | Msa0547170 | 0.805243 | 1.466299e-49 | -8.615850e-47 |
| Msa0342010 | Msa0547170 | 0.808173 | 3.526840e-50 | -8.615850e-47 |
| Msa0342310 | Msa0547170 | 0.804246 | 2.368794e-49 | -8.615850e-47 |
| Msa0345970 | Msa0547170 | 0.808468 | 3.051685e-50 | -8.615850e-47 |
| Msa0358890 | Msa0547170 | 0.829317 | 5.507532e-55 | -8.615850e-47 |
| Msa0360210 | Msa0547170 | 0.820130 | 8.068032e-53 | -8.615850e-47 |
| Msa0488560 | Msa0547170 | 0.807055 | 6.093779e-50 | -8.615850e-47 |
| Msa0507680 | Msa0547170 | 0.824544 | 7.620259e-54 | -8.615850e-47 |
| Msa0516170 | Msa0547170 | 0.802764 | 4.805955e-49 | -8.615850e-47 |
| Msa0529890 | Msa0547170 | 0.809847 | 1.545241e-50 | -8.615850e-47 |
| Msa0532990 | Msa0547170 | 0.810437 | 1.153305e-50 | -8.615850e-47 |
| Msa0538910 | Msa0547170 | 0.801663 | 8.095209e-49 | -8.615850e-47 |
| Msa0547170 | Msa0568480 | 0.811116 | 8.220991e-51 | -8.615850e-47 |
| Msa0547170 | Msa0572840 | 0.823699 | 1.203174e-53 | -8.615850e-47 |
| Msa0547170 | Msa0574390 | 0.806060 | 9.879849e-50 | -8.615850e-47 |
| Msa0547170 | Msa0583360 | -0.822231 | 2.646200e-53 | -8.615850e-47 |
| Msa0547170 | Msa0585560 | 0.824351 | 8.461794e-54 | -8.615850e-47 |
| Msa0547170 | Msa0602460 | 0.807303 | 5.398610e-50 | -8.615850e-47 |
| Msa0547170 | Msa0611210 | 0.810558 | 1.085636e-50 | -8.615850e-47 |
| Msa0547170 | Msa0612960 | 0.809617 | 1.732034e-50 | -8.615850e-47 |
| Msa0547170 | Msa0625720 | 0.808955 | 2.401580e-50 | -8.615850e-47 |
| Msa0547170 | Msa0626450 | 0.818183 | 2.238852e-52 | -8.615850e-47 |
| Msa0547170 | Msa0626490 | 0.816658 | 4.936269e-52 | -8.615850e-47 |
| Msa0547170 | Msa0626510 | 0.800161 | 1.640884e-48 | -8.615850e-47 |
| Msa0547170 | Msa0627450 | 0.819031 | 1.437344e-52 | -8.615850e-47 |
| Msa0547170 | Msa0651550 | 0.822066 | 2.890047e-53 | -8.615850e-47 |
| Msa0547170 | Msa0658960 | 0.802360 | 5.822602e-49 | -8.615850e-47 |
| Msa0547170 | Msa0662340 | 0.845767 | 3.307097e-59 | -8.615850e-47 |
| Msa0547170 | Msa0663390 | 0.839570 | 1.464423e-57 | -8.615850e-47 |
| Msa0547170 | Msa0664600 | 0.815218 | 1.034429e-51 | -8.615850e-47 |
| Msa0547170 | Msa0667050 | 0.804898 | 1.732045e-49 | -8.615850e-47 |
| Msa0547170 | Msa0667790 | 0.801081 | 1.065416e-48 | -8.615850e-47 |
| Msa0547170 | Msa0697160 | 0.820058 | 8.380401e-53 | -8.615850e-47 |
| Msa0547170 | Msa0698800 | 0.800438 | 1.441515e-48 | -8.615850e-47 |
| Msa0547170 | Msa0699280 | 0.803072 | 4.151412e-49 | -8.615850e-47 |
| Msa0547170 | Msa0705120 | 0.805391 | 1.365616e-49 | -8.615850e-47 |
| Msa0547170 | Msa0707250 | 0.820143 | 8.013531e-53 | -8.615850e-47 |
| Msa0547170 | Msa0709400 | 0.806552 | 7.784589e-50 | -8.615850e-47 |
| Msa0547170 | Msa0710800 | 0.806393 | 8.406326e-50 | -8.615850e-47 |
| Msa0547170 | Msa0721280 | 0.807872 | 4.088219e-50 | -8.615850e-47 |
| Msa0547170 | Msa0740510 | 0.813100 | 3.035975e-51 | -8.615850e-47 |
| Msa0547170 | Msa0741440 | 0.806512 | 7.933679e-50 | -8.615850e-47 |
| Msa0547170 | Msa0741840 | 0.810609 | 1.058475e-50 | -8.615850e-47 |
| Msa0547170 | Msa0760180 | 0.804783 | 1.829921e-49 | -8.615850e-47 |
| Msa0547170 | Msa0760250 | 0.801455 | 8.932354e-49 | -8.615850e-47 |
| Msa0547170 | Msa0765910 | 0.802718 | 4.912274e-49 | -8.615850e-47 |
| Msa0547170 | Msa0767300 | 0.818187 | 2.233716e-52 | -8.615850e-47 |
| Msa0547170 | Msa0770720 | 0.817194 | 3.742121e-52 | -8.615850e-47 |
| Msa0547170 | Msa0820770 | 0.814880 | 1.229984e-51 | -8.615850e-47 |
| Msa0547170 | Msa0828560 | 0.800130 | 1.665145e-48 | -8.615850e-47 |
| Msa0547170 | Msa0832120 | 0.805147 | 1.535950e-49 | -8.615850e-47 |
| Msa0547170 | Msa0832150 | 0.813409 | 2.597669e-51 | -8.615850e-47 |
| Msa0547170 | Msa0832340 | 0.826051 | 3.353977e-54 | -8.615850e-47 |
| Msa0547170 | Msa0835800 | 0.809755 | 1.617744e-50 | -8.615850e-47 |
| Msa0547170 | Msa0842790 | 0.822271 | 2.590413e-53 | -8.615850e-47 |
| Msa0547170 | Msa0861090 | 0.817685 | 2.900100e-52 | -8.615850e-47 |
| Msa0547170 | Msa0861510 | 0.822483 | 2.311955e-53 | -8.615850e-47 |
| Msa0547170 | Msa0861530 | 0.805022 | 1.631668e-49 | -8.615850e-47 |
| Msa0547170 | Msa0861600 | 0.818718 | 1.693740e-52 | -8.615850e-47 |
| Msa0547170 | Msa0861870 | 0.811485 | 6.837338e-51 | -8.615850e-47 |
| Msa0547170 | Msa0866520 | 0.824569 | 7.516813e-54 | -8.615850e-47 |
| Msa0547170 | Msa0875290 | 0.827745 | 1.320482e-54 | -8.615850e-47 |
| Msa0547170 | Msa0876190 | 0.800661 | 1.298085e-48 | -8.615850e-47 |
| Msa0547170 | Msa0898750 | 0.845048 | 5.176452e-59 | -8.615850e-47 |
| Msa0547170 | Msa0902510 | 0.817711 | 2.862180e-52 | -8.615850e-47 |
| Msa0547170 | Msa0928130 | 0.837976 | 3.782778e-57 | -8.615850e-47 |
| Msa0547170 | Msa0964310 | 0.853689 | 2.023872e-61 | -8.615850e-47 |
| Msa0547170 | Msa0967380 | 0.801426 | 9.055787e-49 | -8.615850e-47 |
| Msa0547170 | Msa0967870 | 0.816977 | 4.187363e-52 | -8.615850e-47 |
| Msa0547170 | Msa0972100 | 0.823804 | 1.137449e-53 | -8.615850e-47 |
| Msa0547170 | Msa0980880 | 0.824535 | 7.656763e-54 | -8.615850e-47 |
| Msa0547170 | Msa1002850 | 0.826632 | 2.438501e-54 | -8.615850e-47 |
| Msa0547170 | Msa1009660 | 0.804668 | 1.934487e-49 | -8.615850e-47 |
| Msa0547170 | Msa1018990 | -0.816277 | 6.007687e-52 | -8.615850e-47 |
| Msa0547170 | Msa1019000 | 0.808787 | 2.608154e-50 | -8.615850e-47 |
| Msa0547170 | Msa1019430 | 0.800527 | 1.382498e-48 | -8.615850e-47 |
| Msa0547170 | Msa1019470 | 0.801912 | 7.199224e-49 | -8.615850e-47 |
| Msa0547170 | Msa1026740 | 0.814132 | 1.799751e-51 | -8.615850e-47 |
| Msa0547170 | Msa1029310 | 0.801407 | 9.135647e-49 | -8.615850e-47 |
| Msa0547170 | Msa1031280 | -0.804753 | 1.857039e-49 | -8.615850e-47 |
| Msa0547170 | Msa1031930 | 0.809729 | 1.638318e-50 | -8.615850e-47 |
| Msa0547170 | Msa1035480 | 0.820045 | 8.440665e-53 | -8.615850e-47 |
| Msa0547170 | Msa1035960 | 0.851941 | 6.392360e-61 | -8.615850e-47 |
| Msa0547170 | Msa1036610 | 0.804063 | 2.585459e-49 | -8.615850e-47 |
| Msa0547170 | Msa1043370 | 0.824812 | 6.589742e-54 | -8.615850e-47 |
| Msa0547170 | Msa1050910 | 0.800512 | 1.392325e-48 | -8.615850e-47 |
| Msa0547170 | Msa1078170 | 0.811034 | 8.565122e-51 | -8.615850e-47 |
| Msa0547170 | Msa1085200 | 0.827181 | 1.803191e-54 | -8.615850e-47 |
| Msa0547170 | Msa1101090 | 0.811639 | 6.330438e-51 | -8.615850e-47 |
| Msa0547170 | Msa1104560 | 0.809917 | 1.493097e-50 | -8.615850e-47 |
| Msa0547170 | Msa1109680 | 0.802382 | 5.761785e-49 | -8.615850e-47 |
| Msa0547170 | Msa1121440 | 0.802793 | 4.739544e-49 | -8.615850e-47 |
| Msa0547170 | Msa1122520 | 0.812035 | 5.192320e-51 | -8.615850e-47 |
| Msa0547170 | Msa1123380 | 0.822227 | 2.652252e-53 | -8.615850e-47 |
| Msa0547170 | Msa1126450 | 0.818693 | 1.715931e-52 | -8.615850e-47 |
| Msa0547170 | Msa1137570 | 0.800421 | 1.453073e-48 | -8.615850e-47 |
| Msa0547170 | Msa1140210 | 0.839414 | 1.607718e-57 | -8.615850e-47 |
| Msa0547170 | Msa1142020 | 0.803359 | 3.620332e-49 | -8.615850e-47 |
| Msa0547170 | Msa1145810 | 0.834546 | 2.815214e-56 | -8.615850e-47 |
| Msa0547170 | Msa1154280 | 0.812583 | 3.940976e-51 | -8.615850e-47 |
| Msa0547170 | Msa1155170 | -0.844542 | 7.090321e-59 | -8.615850e-47 |
| Msa0547170 | Msa1163730 | 0.838902 | 2.181683e-57 | -8.615850e-47 |
| Msa0547170 | Msa1167340 | 0.820030 | 8.505344e-53 | -8.615850e-47 |
| Msa0547170 | Msa1168580 | 0.814640 | 1.389882e-51 | -8.615850e-47 |
| Msa0547170 | Msa1173100 | 0.816591 | 5.109550e-52 | -8.615850e-47 |
| Msa0547170 | Msa1181910 | 0.816203 | 6.239964e-52 | -8.615850e-47 |
| Msa0547170 | Msa1186020 | 0.810478 | 1.129765e-50 | -8.615850e-47 |
| Msa0547170 | Msa1189070 | 0.824153 | 9.419891e-54 | -8.615850e-47 |
| Msa0547170 | Msa1199570 | 0.802494 | 5.464046e-49 | -8.615850e-47 |
| Msa0547170 | Msa1204530 | 0.807269 | 5.489633e-50 | -8.615850e-47 |
| Msa0547170 | Msa1204630 | 0.821406 | 4.105906e-53 | -8.615850e-47 |
| Msa0547170 | Msa1205280 | 0.824967 | 6.059056e-54 | -8.615850e-47 |
| Msa0547170 | Msa1209460 | 0.806859 | 6.701905e-50 | -8.615850e-47 |
| Msa0547170 | Msa1225860 | -0.823315 | 1.480062e-53 | -8.615850e-47 |
| Msa0547170 | Msa1228200 | 0.809621 | 1.728423e-50 | -8.615850e-47 |
| Msa0547170 | Msa1243490 | 0.807937 | 3.959510e-50 | -8.615850e-47 |
| Msa0547170 | Msa1257300 | 0.807248 | 5.544869e-50 | -8.615850e-47 |
| Msa0547170 | Msa1276660 | 0.811305 | 7.483139e-51 | -8.615850e-47 |
| Msa0547170 | Msa1284550 | 0.824430 | 8.108483e-54 | -8.615850e-47 |
| Msa0547170 | Msa1297230 | 0.829367 | 5.356108e-55 | -8.615850e-47 |
| Msa0547170 | Msa1298370 | 0.806480 | 8.059982e-50 | -8.615850e-47 |
| Msa0547170 | Msa1308870 | 0.803047 | 4.199754e-49 | -8.615850e-47 |
| Msa0547170 | Msa1314650 | 0.831530 | 1.584508e-55 | -8.615850e-47 |
| Msa0547170 | Msa1315590 | 0.835122 | 2.016794e-56 | -8.615850e-47 |
| Msa0547170 | Msa1315750 | 0.802685 | 4.989170e-49 | -8.615850e-47 |
| Msa0547170 | Msa1328710 | 0.815589 | 8.557067e-52 | -8.615850e-47 |
| Msa0547170 | Msa1331000 | 0.808306 | 3.304188e-50 | -8.615850e-47 |
| Msa0547170 | Msa1332760 | 0.812700 | 3.715711e-51 | -8.615850e-47 |
| Msa0547170 | Msa1333480 | 0.818099 | 2.338690e-52 | -8.615850e-47 |
| Msa0547170 | Msa1343430 | 0.817097 | 3.933714e-52 | -8.615850e-47 |
| Msa0547170 | Msa1345810 | 0.823276 | 1.511290e-53 | -8.615850e-47 |
| Msa0547170 | Msa1346840 | 0.801054 | 1.078766e-48 | -8.615850e-47 |
| Msa0547170 | Msa1347310 | 0.833781 | 4.378236e-56 | -8.615850e-47 |
| Msa0547170 | Msa1353980 | 0.847835 | 8.989876e-60 | -8.615850e-47 |
| Msa0547170 | Msa1357890 | 0.806283 | 8.868557e-50 | -8.615850e-47 |
| Msa0547170 | Msa1360440 | 0.831314 | 1.790447e-55 | -8.615850e-47 |
| Msa0547170 | Msa1360980 | 0.827584 | 1.442968e-54 | -8.615850e-47 |
| Msa0547170 | Msa1366340 | 0.812928 | 3.311904e-51 | -8.615850e-47 |
| Msa0547170 | Msa1368430 | 0.823350 | 1.452142e-53 | -8.615850e-47 |
| Msa0547170 | Msa1370070 | -0.815604 | 8.490998e-52 | -8.615850e-47 |
| Msa0547170 | Msa1382400 | 0.805405 | 1.356309e-49 | -8.615850e-47 |
| Msa0547170 | Msa1383230 | 0.800136 | 1.660050e-48 | -8.615850e-47 |
| Msa0547170 | Msa1384870 | 0.803377 | 3.589190e-49 | -8.615850e-47 |
| Msa0547170 | Msa1385890 | 0.839389 | 1.631277e-57 | -8.615850e-47 |
| Msa0547170 | Msa1393570 | 0.832385 | 9.740754e-56 | -8.615850e-47 |
| Msa0547170 | Msa1398090 | 0.806108 | 9.654908e-50 | -8.615850e-47 |
| Msa0547170 | Msa1400870 | -0.802041 | 6.772228e-49 | -8.615850e-47 |
| Msa0547170 | Msa1404300 | 0.800818 | 1.205527e-48 | -8.615850e-47 |
| Msa0547170 | Msa1419690 | 0.802861 | 4.589351e-49 | -8.615850e-47 |
| Msa0547170 | Msa1425880 | 0.803971 | 2.701886e-49 | -8.615850e-47 |
| Msa0547170 | Msa1433390 | 0.812219 | 4.732387e-51 | -8.615850e-47 |
| Msa0547170 | Msa1440310 | 0.804707 | 1.897969e-49 | -8.615850e-47 |
| Msa0547170 | Msa1440960 | 0.800563 | 1.358983e-48 | -8.615850e-47 |
| Msa0547170 | Msa1444510 | 0.816709 | 4.808465e-52 | -8.615850e-47 |
| Msa0547170 | Msa1448560 | 0.805929 | 1.052699e-49 | -8.615850e-47 |
| Msa0547170 | Msa1449340 | -0.814647 | 1.385300e-51 | -8.615850e-47 |
| Msa0547170 | Msa1451160 | 0.819862 | 9.293462e-53 | -8.615850e-47 |
| Msa0547170 | Msa1454620 | 0.801477 | 8.839545e-49 | -8.615850e-47 |
| Msa0547170 | Msa1463900 | 0.838680 | 2.489714e-57 | -8.615850e-47 |
| Msa0547170 | Msa1464810 | 0.840365 | 9.088125e-58 | -8.615850e-47 |
| Msa0547170 | Msa1466540 | 0.829085 | 6.270695e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547170 | MtrunA17_Chr4g0028991 | 80.108 | 186 | 3 | 1 | 1 | 152 | 661 | 846 | 1.33e-96 | 296 |
| Msa0547170 | MtrunA17_Chr2g0326731 | 65.054 | 186 | 30 | 2 | 1 | 152 | 655 | 839 | 9.48e-74 | 235 |
| Msa0547170 | MtrunA17_Chr2g0292391 | 56.383 | 188 | 45 | 2 | 1 | 152 | 650 | 836 | 5.91e-63 | 206 |
| Msa0547170 | MtrunA17_Chr8g0340411 | 53.763 | 186 | 51 | 2 | 1 | 152 | 648 | 832 | 9.09e-60 | 197 |
| Msa0547170 | MtrunA17_Chr3g0140351 | 52.174 | 184 | 55 | 2 | 1 | 152 | 653 | 835 | 1.95e-59 | 197 |
| Msa0547170 | MtrunA17_Chr2g0331131 | 53.226 | 186 | 52 | 2 | 1 | 152 | 652 | 836 | 3.39e-59 | 196 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547170 | AT5G60690.1 | 66.842 | 190 | 25 | 2 | 1 | 152 | 653 | 842 | 1.70e-78 | 248 |
| Msa0547170 | AT1G52150.2 | 56.989 | 186 | 45 | 2 | 1 | 152 | 653 | 837 | 3.87e-64 | 210 |
| Msa0547170 | AT1G52150.1 | 56.989 | 186 | 45 | 2 | 1 | 152 | 652 | 836 | 3.99e-64 | 210 |
| Msa0547170 | AT2G34710.1 | 52.604 | 192 | 46 | 4 | 1 | 152 | 666 | 852 | 7.42e-57 | 190 |
| Msa0547170 | AT1G30490.1 | 51.053 | 190 | 49 | 3 | 1 | 152 | 658 | 841 | 3.11e-55 | 186 |
| Msa0547170 | AT4G32880.1 | 52.973 | 185 | 52 | 4 | 1 | 152 | 651 | 833 | 2.81e-54 | 183 |
| Msa0547170 | AT1G52150.3 | 53.285 | 137 | 30 | 1 | 1 | 103 | 652 | 788 | 6.69e-39 | 139 |
Find 49 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCTTTCTCTTTCATAAAT+TGG | 0.177453 | 4_1:-39951548 | Msa0547170:CDS |
| GAATTAATCTTGTAAATTAT+TGG | 0.241549 | 4_1:-39951391 | Msa0547170:three_prime_UTR |
| AATGGATCTGCCAGAGTTAT+AGG | 0.277310 | 4_1:-39952265 | Msa0547170:CDS |
| TGAGCTAGTGTAACTGCTTC+TGG | 0.294323 | 4_1:+39952287 | None:intergenic |
| GGGTTTGCTTATCTGCCAGC+TGG | 0.357471 | 4_1:-39951663 | Msa0547170:CDS |
| TGGAGAACCAGGAGAAAGTT+TGG | 0.380345 | 4_1:+39952307 | None:intergenic |
| GAAAGTTTGGCACCAACAGC+TGG | 0.405904 | 4_1:+39952320 | None:intergenic |
| GTTGGTGCCAAACTTTCTCC+TGG | 0.425700 | 4_1:-39952314 | Msa0547170:CDS |
| GGGATCTGCATGTCGACAAT+GGG | 0.430271 | 4_1:-39951642 | Msa0547170:CDS |
| AACCACCTGTTGCATTAACT+TGG | 0.435864 | 4_1:+39951776 | None:intergenic |
| CAATGAACAGTGTTATCTTC+TGG | 0.436228 | 4_1:+39951573 | None:intergenic |
| GATAAAATATTTGACGAGTC+TGG | 0.446806 | 4_1:-39951825 | Msa0547170:CDS |
| CTCTGTGCAGAGGGTTGCCA+TGG | 0.455799 | 4_1:-39952366 | Msa0547170:CDS |
| GTTTATACCGGACGGAGAAA+TGG | 0.458027 | 4_1:+39952343 | None:intergenic |
| GCCATGGCCATTTCTCCGTC+CGG | 0.458111 | 4_1:-39952350 | Msa0547170:CDS |
| TTTGGTATTGCAGTCGCAGC+CGG | 0.467861 | 4_1:-39951922 | Msa0547170:intron |
| TGTTAGCACTTTCCATGCAA+TGG | 0.472949 | 4_1:+39951596 | None:intergenic |
| AATCTAATTAAATGCAAACT+TGG | 0.478916 | 4_1:+39951442 | None:intergenic |
| TGTAGACTTGCCTATAACTC+TGG | 0.480673 | 4_1:+39952255 | None:intergenic |
| GTAATCAATGATAAATTTGA+AGG | 0.481205 | 4_1:-39951493 | Msa0547170:three_prime_UTR |
| TTTGTATTTGCAAATCAAGC+TGG | 0.503494 | 4_1:-39951897 | Msa0547170:CDS |
| TCAAGCTGGCCTTGACATGT+TGG | 0.506180 | 4_1:-39951883 | Msa0547170:CDS |
| GAGTGAAGTTGAGACTTGTA+TGG | 0.508388 | 4_1:-39951360 | Msa0547170:three_prime_UTR |
| GGTTTGCTTATCTGCCAGCT+GGG | 0.514174 | 4_1:-39951662 | Msa0547170:CDS |
| AAGCAGTTACACTAGCTCAA+TGG | 0.520279 | 4_1:-39952283 | Msa0547170:CDS |
| TAGTATCTGTCTAGTTTGAA+AGG | 0.520632 | 4_1:-39951313 | Msa0547170:three_prime_UTR |
| ACCAACAGCTGGGTTTATAC+CGG | 0.520732 | 4_1:+39952331 | None:intergenic |
| GTCGACATGCAGATCCCAGC+TGG | 0.520952 | 4_1:+39951648 | None:intergenic |
| TTTACAAGATTAATTCAACT+TGG | 0.526796 | 4_1:+39951398 | None:intergenic |
| TGGGATCTGCATGTCGACAA+TGG | 0.533448 | 4_1:-39951643 | Msa0547170:CDS |
| GTAACTGCTTCTGGAGAACC+AGG | 0.547189 | 4_1:+39952296 | None:intergenic |
| CTAAAGCAAATCATCTTGAA+AGG | 0.550660 | 4_1:-39951277 | Msa0547170:three_prime_UTR |
| TGTGATTTCCTCTGTGCAGA+GGG | 0.551770 | 4_1:-39952375 | Msa0547170:CDS |
| TTGATTACTAGCATTCACAT+TGG | 0.557586 | 4_1:+39951508 | None:intergenic |
| CGTACGAGCAAGCCATTGCA+TGG | 0.562208 | 4_1:-39951608 | Msa0547170:CDS |
| ATTTGACGAGTCTGGTCGCA+AGG | 0.571396 | 4_1:-39951817 | Msa0547170:CDS |
| GTGTGATTTCCTCTGTGCAG+AGG | 0.574274 | 4_1:-39952376 | Msa0547170:CDS |
| AAAGTTTGGCACCAACAGCT+GGG | 0.574992 | 4_1:+39952321 | None:intergenic |
| TAATCAATGATAAATTTGAA+GGG | 0.577601 | 4_1:-39951492 | Msa0547170:three_prime_UTR |
| TCCGGTATAAACCCAGCTGT+TGG | 0.580698 | 4_1:-39952332 | Msa0547170:CDS |
| GAGTTGTTTCCAACATGTCA+AGG | 0.591719 | 4_1:+39951874 | None:intergenic |
| TGATTTGCAAATACAAACAC+CGG | 0.610151 | 4_1:+39951903 | None:intergenic |
| AATCAATGATAAATTTGAAG+GGG | 0.613068 | 4_1:-39951491 | Msa0547170:three_prime_UTR |
| ACCGGACGGAGAAATGGCCA+TGG | 0.644894 | 4_1:+39952349 | None:intergenic |
| AGCTTTACAAGACATCACAT+TGG | 0.658238 | 4_1:-39951847 | Msa0547170:CDS |
| TCTGCATGTCGACAATGGGG+CGG | 0.660182 | 4_1:-39951638 | Msa0547170:CDS |
| ACAGCTGGGTTTATACCGGA+CGG | 0.670270 | 4_1:+39952335 | None:intergenic |
| GGATCTGCATGTCGACAATG+GGG | 0.672158 | 4_1:-39951641 | Msa0547170:CDS |
| CATGGCAACCCTCTGCACAG+AGG | 0.723163 | 4_1:+39952367 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCAATGATAAATTTGAA+GGG | - | chr4_1:39952179-39952198 | Msa0547170:intron | 15.0% |
| !! | GAATTAATCTTGTAAATTAT+TGG | - | chr4_1:39952280-39952299 | Msa0547170:CDS | 15.0% |
| !! | TAATCAATGATAAATTTGAA+GGG | - | chr4_1:39952179-39952198 | Msa0547170:intron | 15.0% |
| !! | GAATTAATCTTGTAAATTAT+TGG | - | chr4_1:39952280-39952299 | Msa0547170:CDS | 15.0% |
| !! | TGTAATTCTATTTCATTGTA+TGG | - | chr4_1:39951636-39951655 | Msa0547170:CDS | 20.0% |
| !! | GTAATCAATGATAAATTTGA+AGG | - | chr4_1:39952178-39952197 | Msa0547170:intron | 20.0% |
| !! | AATCAATGATAAATTTGAAG+GGG | - | chr4_1:39952180-39952199 | Msa0547170:intron | 20.0% |
| !! | AATCTAATTAAATGCAAACT+TGG | + | chr4_1:39952232-39952251 | None:intergenic | 20.0% |
| !! | TTTACAAGATTAATTCAACT+TGG | + | chr4_1:39952276-39952295 | None:intergenic | 20.0% |
| !! | TGTAATTCTATTTCATTGTA+TGG | - | chr4_1:39951636-39951655 | Msa0547170:CDS | 20.0% |
| !! | GTAATCAATGATAAATTTGA+AGG | - | chr4_1:39952178-39952197 | Msa0547170:intron | 20.0% |
| !! | AATCAATGATAAATTTGAAG+GGG | - | chr4_1:39952180-39952199 | Msa0547170:intron | 20.0% |
| !! | AATCTAATTAAATGCAAACT+TGG | + | chr4_1:39952232-39952251 | None:intergenic | 20.0% |
| !! | TTTACAAGATTAATTCAACT+TGG | + | chr4_1:39952276-39952295 | None:intergenic | 20.0% |
| !!! | CTTTTCTGAAAAAAGTCTAA+TGG | - | chr4_1:39951478-39951497 | Msa0547170:three_prime_UTR | 25.0% |
| ! | CCAAATAGTAACTGATTAAA+GGG | + | chr4_1:39951514-39951533 | None:intergenic | 25.0% |
| ! | CCTTTAATCAGTTACTATTT+GGG | - | chr4_1:39951512-39951531 | Msa0547170:three_prime_UTR | 25.0% |
| ! | CTTTAATCAGTTACTATTTG+GGG | - | chr4_1:39951513-39951532 | Msa0547170:three_prime_UTR | 25.0% |
| ! | AATTCTATTTCATTGTATGG+TGG | - | chr4_1:39951639-39951658 | Msa0547170:CDS | 25.0% |
| !! | GATTAATGTGATTTTCTGTT+TGG | - | chr4_1:39951731-39951750 | Msa0547170:intron | 25.0% |
| ! | AAGTTGTGTATACTTTGATT+AGG | - | chr4_1:39951986-39952005 | Msa0547170:intron | 25.0% |
| ! | AGTTGTGTATACTTTGATTA+GGG | - | chr4_1:39951987-39952006 | Msa0547170:intron | 25.0% |
| ! | TAGCTTTCTCTTTCATAAAT+TGG | - | chr4_1:39952123-39952142 | Msa0547170:intron | 25.0% |
| !!! | CTTTTCTGAAAAAAGTCTAA+TGG | - | chr4_1:39951478-39951497 | Msa0547170:three_prime_UTR | 25.0% |
| ! | CCAAATAGTAACTGATTAAA+GGG | + | chr4_1:39951514-39951533 | None:intergenic | 25.0% |
| ! | CCTTTAATCAGTTACTATTT+GGG | - | chr4_1:39951512-39951531 | Msa0547170:three_prime_UTR | 25.0% |
| ! | CTTTAATCAGTTACTATTTG+GGG | - | chr4_1:39951513-39951532 | Msa0547170:three_prime_UTR | 25.0% |
| ! | AATTCTATTTCATTGTATGG+TGG | - | chr4_1:39951639-39951658 | Msa0547170:CDS | 25.0% |
| !! | GATTAATGTGATTTTCTGTT+TGG | - | chr4_1:39951731-39951750 | Msa0547170:intron | 25.0% |
| ! | AAGTTGTGTATACTTTGATT+AGG | - | chr4_1:39951986-39952005 | Msa0547170:intron | 25.0% |
| ! | AGTTGTGTATACTTTGATTA+GGG | - | chr4_1:39951987-39952006 | Msa0547170:intron | 25.0% |
| ! | TAGCTTTCTCTTTCATAAAT+TGG | - | chr4_1:39952123-39952142 | Msa0547170:intron | 25.0% |
| CCCTTTAATCAGTTACTATT+TGG | - | chr4_1:39951511-39951530 | Msa0547170:three_prime_UTR | 30.0% | |
| CCCAAATAGTAACTGATTAA+AGG | + | chr4_1:39951515-39951534 | None:intergenic | 30.0% | |
| ! | GATTTTATGCTGTTCATTGA+AGG | - | chr4_1:39951607-39951626 | Msa0547170:CDS | 30.0% |
| CTTATGTTTAGAAAGGAAGT+TGG | - | chr4_1:39951673-39951692 | Msa0547170:intron | 30.0% | |
| ! | AGTTGGAAGGTTTGTAATTT+TGG | - | chr4_1:39951690-39951709 | Msa0547170:intron | 30.0% |
| ACATTAATCTCGCGTTATAA+AGG | + | chr4_1:39951720-39951739 | None:intergenic | 30.0% | |
| ! | TGATTTGCAAATACAAACAC+CGG | + | chr4_1:39951771-39951790 | None:intergenic | 30.0% |
| TTTGTATTTGCAAATCAAGC+TGG | - | chr4_1:39951774-39951793 | Msa0547170:intron | 30.0% | |
| GATAAAATATTTGACGAGTC+TGG | - | chr4_1:39951846-39951865 | Msa0547170:CDS | 30.0% | |
| ! | GCATTATTCATGTTAAGTTG+AGG | + | chr4_1:39951922-39951941 | None:intergenic | 30.0% |
| GTTGTGTATACTTTGATTAG+GGG | - | chr4_1:39951988-39952007 | Msa0547170:intron | 30.0% | |
| TTGATTACTAGCATTCACAT+TGG | + | chr4_1:39952166-39952185 | None:intergenic | 30.0% | |
| AAATTTGAAGGGGAAAAATC+AGG | - | chr4_1:39952190-39952209 | Msa0547170:intron | 30.0% | |
| ! | TAGTATCTGTCTAGTTTGAA+AGG | - | chr4_1:39952358-39952377 | Msa0547170:CDS | 30.0% |
| CTAAAGCAAATCATCTTGAA+AGG | - | chr4_1:39952394-39952413 | Msa0547170:CDS | 30.0% | |
| CCCTTTAATCAGTTACTATT+TGG | - | chr4_1:39951511-39951530 | Msa0547170:three_prime_UTR | 30.0% | |
| CCCAAATAGTAACTGATTAA+AGG | + | chr4_1:39951515-39951534 | None:intergenic | 30.0% | |
| ! | GATTTTATGCTGTTCATTGA+AGG | - | chr4_1:39951607-39951626 | Msa0547170:CDS | 30.0% |
| CTTATGTTTAGAAAGGAAGT+TGG | - | chr4_1:39951673-39951692 | Msa0547170:intron | 30.0% | |
| ! | AGTTGGAAGGTTTGTAATTT+TGG | - | chr4_1:39951690-39951709 | Msa0547170:intron | 30.0% |
| ACATTAATCTCGCGTTATAA+AGG | + | chr4_1:39951720-39951739 | None:intergenic | 30.0% | |
| ! | TGATTTGCAAATACAAACAC+CGG | + | chr4_1:39951771-39951790 | None:intergenic | 30.0% |
| TTTGTATTTGCAAATCAAGC+TGG | - | chr4_1:39951774-39951793 | Msa0547170:intron | 30.0% | |
| GATAAAATATTTGACGAGTC+TGG | - | chr4_1:39951846-39951865 | Msa0547170:CDS | 30.0% | |
| ! | GCATTATTCATGTTAAGTTG+AGG | + | chr4_1:39951922-39951941 | None:intergenic | 30.0% |
| GTTGTGTATACTTTGATTAG+GGG | - | chr4_1:39951988-39952007 | Msa0547170:intron | 30.0% | |
| TTGATTACTAGCATTCACAT+TGG | + | chr4_1:39952166-39952185 | None:intergenic | 30.0% | |
| AAATTTGAAGGGGAAAAATC+AGG | - | chr4_1:39952190-39952209 | Msa0547170:intron | 30.0% | |
| ! | TAGTATCTGTCTAGTTTGAA+AGG | - | chr4_1:39952358-39952377 | Msa0547170:CDS | 30.0% |
| CTAAAGCAAATCATCTTGAA+AGG | - | chr4_1:39952394-39952413 | Msa0547170:CDS | 30.0% | |
| AATCAGTTACTATTTGGGGA+CGG | - | chr4_1:39951517-39951536 | Msa0547170:exon | 35.0% | |
| TATGCTGTTCATTGAAGGTA+TGG | - | chr4_1:39951612-39951631 | Msa0547170:CDS | 35.0% | |
| TCTATTTCATTGTATGGTGG+CGG | - | chr4_1:39951642-39951661 | Msa0547170:CDS | 35.0% | |
| GGTGGTTCTTATGTTTAGAA+AGG | - | chr4_1:39951666-39951685 | Msa0547170:CDS | 35.0% | |
| TGTTTAGAAAGGAAGTTGGA+AGG | - | chr4_1:39951677-39951696 | Msa0547170:intron | 35.0% | |
| AGCTTTACAAGACATCACAT+TGG | - | chr4_1:39951824-39951843 | Msa0547170:CDS | 35.0% | |
| ! | TTTTGCCAAGTTAATGCAAC+AGG | - | chr4_1:39951890-39951909 | Msa0547170:CDS | 35.0% |
| CAATGAACAGTGTTATCTTC+TGG | + | chr4_1:39952101-39952120 | None:intergenic | 35.0% | |
| AATCAGTTACTATTTGGGGA+CGG | - | chr4_1:39951517-39951536 | Msa0547170:exon | 35.0% | |
| TATGCTGTTCATTGAAGGTA+TGG | - | chr4_1:39951612-39951631 | Msa0547170:CDS | 35.0% | |
| TCTATTTCATTGTATGGTGG+CGG | - | chr4_1:39951642-39951661 | Msa0547170:CDS | 35.0% | |
| GGTGGTTCTTATGTTTAGAA+AGG | - | chr4_1:39951666-39951685 | Msa0547170:CDS | 35.0% | |
| TGTTTAGAAAGGAAGTTGGA+AGG | - | chr4_1:39951677-39951696 | Msa0547170:intron | 35.0% | |
| AGCTTTACAAGACATCACAT+TGG | - | chr4_1:39951824-39951843 | Msa0547170:CDS | 35.0% | |
| ! | TTTTGCCAAGTTAATGCAAC+AGG | - | chr4_1:39951890-39951909 | Msa0547170:CDS | 35.0% |
| CAATGAACAGTGTTATCTTC+TGG | + | chr4_1:39952101-39952120 | None:intergenic | 35.0% | |
| AAGCAGTTACACTAGCTCAA+TGG | - | chr4_1:39951388-39951407 | Msa0547170:three_prime_UTR | 40.0% | |
| AATGGATCTGCCAGAGTTAT+AGG | - | chr4_1:39951406-39951425 | Msa0547170:three_prime_UTR | 40.0% | |
| TGTAGACTTGCCTATAACTC+TGG | + | chr4_1:39951419-39951438 | None:intergenic | 40.0% | |
| CTGAGATCAGATTCTCTTGT+TGG | - | chr4_1:39951545-39951564 | Msa0547170:CDS | 40.0% | |
| ACTTGATGCTGAAACAACTG+TGG | - | chr4_1:39951570-39951589 | Msa0547170:CDS | 40.0% | |
| ! | GAGTTGTTTCCAACATGTCA+AGG | + | chr4_1:39951800-39951819 | None:intergenic | 40.0% |
| AACCACCTGTTGCATTAACT+TGG | + | chr4_1:39951898-39951917 | None:intergenic | 40.0% | |
| TGTTAGCACTTTCCATGCAA+TGG | + | chr4_1:39952078-39952097 | None:intergenic | 40.0% | |
| GAGTGAAGTTGAGACTTGTA+TGG | - | chr4_1:39952311-39952330 | Msa0547170:CDS | 40.0% | |
| AAGCAGTTACACTAGCTCAA+TGG | - | chr4_1:39951388-39951407 | Msa0547170:three_prime_UTR | 40.0% | |
| AATGGATCTGCCAGAGTTAT+AGG | - | chr4_1:39951406-39951425 | Msa0547170:three_prime_UTR | 40.0% | |
| TGTAGACTTGCCTATAACTC+TGG | + | chr4_1:39951419-39951438 | None:intergenic | 40.0% | |
| CTGAGATCAGATTCTCTTGT+TGG | - | chr4_1:39951545-39951564 | Msa0547170:CDS | 40.0% | |
| ACTTGATGCTGAAACAACTG+TGG | - | chr4_1:39951570-39951589 | Msa0547170:CDS | 40.0% | |
| ! | GAGTTGTTTCCAACATGTCA+AGG | + | chr4_1:39951800-39951819 | None:intergenic | 40.0% |
| AACCACCTGTTGCATTAACT+TGG | + | chr4_1:39951898-39951917 | None:intergenic | 40.0% | |
| TGTTAGCACTTTCCATGCAA+TGG | + | chr4_1:39952078-39952097 | None:intergenic | 40.0% | |
| GAGTGAAGTTGAGACTTGTA+TGG | - | chr4_1:39952311-39952330 | Msa0547170:CDS | 40.0% | |
| TGTGATTTCCTCTGTGCAGA+GGG | - | chr4_1:39951296-39951315 | Msa0547170:three_prime_UTR | 45.0% | |
| GTTTATACCGGACGGAGAAA+TGG | + | chr4_1:39951331-39951350 | None:intergenic | 45.0% | |
| ACCAACAGCTGGGTTTATAC+CGG | + | chr4_1:39951343-39951362 | None:intergenic | 45.0% | |
| AAAGTTTGGCACCAACAGCT+GGG | + | chr4_1:39951353-39951372 | None:intergenic | 45.0% | |
| TGGAGAACCAGGAGAAAGTT+TGG | + | chr4_1:39951367-39951386 | None:intergenic | 45.0% | |
| TGAGCTAGTGTAACTGCTTC+TGG | + | chr4_1:39951387-39951406 | None:intergenic | 45.0% | |
| AACAGCATAAAATCGCGTCC+TGG | + | chr4_1:39951601-39951620 | None:intergenic | 45.0% | |
| !! | ATTTCATTGTATGGTGGCGG+AGG | - | chr4_1:39951645-39951664 | Msa0547170:CDS | 45.0% |
| TGCCAAGTTAATGCAACAGG+TGG | - | chr4_1:39951893-39951912 | Msa0547170:CDS | 45.0% | |
| TGTGATTTCCTCTGTGCAGA+GGG | - | chr4_1:39951296-39951315 | Msa0547170:three_prime_UTR | 45.0% | |
| GTTTATACCGGACGGAGAAA+TGG | + | chr4_1:39951331-39951350 | None:intergenic | 45.0% | |
| ACCAACAGCTGGGTTTATAC+CGG | + | chr4_1:39951343-39951362 | None:intergenic | 45.0% | |
| AAAGTTTGGCACCAACAGCT+GGG | + | chr4_1:39951353-39951372 | None:intergenic | 45.0% | |
| TGGAGAACCAGGAGAAAGTT+TGG | + | chr4_1:39951367-39951386 | None:intergenic | 45.0% | |
| TGAGCTAGTGTAACTGCTTC+TGG | + | chr4_1:39951387-39951406 | None:intergenic | 45.0% | |
| AACAGCATAAAATCGCGTCC+TGG | + | chr4_1:39951601-39951620 | None:intergenic | 45.0% | |
| !! | ATTTCATTGTATGGTGGCGG+AGG | - | chr4_1:39951645-39951664 | Msa0547170:CDS | 45.0% |
| TGCCAAGTTAATGCAACAGG+TGG | - | chr4_1:39951893-39951912 | Msa0547170:CDS | 45.0% | |
| GTGTGATTTCCTCTGTGCAG+AGG | - | chr4_1:39951295-39951314 | Msa0547170:three_prime_UTR | 50.0% | |
| ACAGCTGGGTTTATACCGGA+CGG | + | chr4_1:39951339-39951358 | None:intergenic | 50.0% | |
| TCCGGTATAAACCCAGCTGT+TGG | - | chr4_1:39951339-39951358 | Msa0547170:three_prime_UTR | 50.0% | |
| GAAAGTTTGGCACCAACAGC+TGG | + | chr4_1:39951354-39951373 | None:intergenic | 50.0% | |
| !! | GTTGGTGCCAAACTTTCTCC+TGG | - | chr4_1:39951357-39951376 | Msa0547170:three_prime_UTR | 50.0% |
| ! | GTAACTGCTTCTGGAGAACC+AGG | + | chr4_1:39951378-39951397 | None:intergenic | 50.0% |
| GAAACAACTGTGGCATCACC+AGG | - | chr4_1:39951580-39951599 | Msa0547170:CDS | 50.0% | |
| TTTGGTATTGCAGTCGCAGC+CGG | - | chr4_1:39951749-39951768 | Msa0547170:intron | 50.0% | |
| !! | TCAAGCTGGCCTTGACATGT+TGG | - | chr4_1:39951788-39951807 | Msa0547170:CDS | 50.0% |
| ATTTGACGAGTCTGGTCGCA+AGG | - | chr4_1:39951854-39951873 | Msa0547170:CDS | 50.0% | |
| ! | GGTTTGCTTATCTGCCAGCT+GGG | - | chr4_1:39952009-39952028 | Msa0547170:intron | 50.0% |
| TGGGATCTGCATGTCGACAA+TGG | - | chr4_1:39952028-39952047 | Msa0547170:intron | 50.0% | |
| GGGATCTGCATGTCGACAAT+GGG | - | chr4_1:39952029-39952048 | Msa0547170:intron | 50.0% | |
| GGATCTGCATGTCGACAATG+GGG | - | chr4_1:39952030-39952049 | Msa0547170:intron | 50.0% | |
| GTGTGATTTCCTCTGTGCAG+AGG | - | chr4_1:39951295-39951314 | Msa0547170:three_prime_UTR | 50.0% | |
| ACAGCTGGGTTTATACCGGA+CGG | + | chr4_1:39951339-39951358 | None:intergenic | 50.0% | |
| TCCGGTATAAACCCAGCTGT+TGG | - | chr4_1:39951339-39951358 | Msa0547170:three_prime_UTR | 50.0% | |
| GAAAGTTTGGCACCAACAGC+TGG | + | chr4_1:39951354-39951373 | None:intergenic | 50.0% | |
| !! | GTTGGTGCCAAACTTTCTCC+TGG | - | chr4_1:39951357-39951376 | Msa0547170:three_prime_UTR | 50.0% |
| ! | GTAACTGCTTCTGGAGAACC+AGG | + | chr4_1:39951378-39951397 | None:intergenic | 50.0% |
| GAAACAACTGTGGCATCACC+AGG | - | chr4_1:39951580-39951599 | Msa0547170:CDS | 50.0% | |
| TTTGGTATTGCAGTCGCAGC+CGG | - | chr4_1:39951749-39951768 | Msa0547170:intron | 50.0% | |
| !! | TCAAGCTGGCCTTGACATGT+TGG | - | chr4_1:39951788-39951807 | Msa0547170:CDS | 50.0% |
| ATTTGACGAGTCTGGTCGCA+AGG | - | chr4_1:39951854-39951873 | Msa0547170:CDS | 50.0% | |
| ! | GGTTTGCTTATCTGCCAGCT+GGG | - | chr4_1:39952009-39952028 | Msa0547170:intron | 50.0% |
| TGGGATCTGCATGTCGACAA+TGG | - | chr4_1:39952028-39952047 | Msa0547170:intron | 50.0% | |
| GGGATCTGCATGTCGACAAT+GGG | - | chr4_1:39952029-39952048 | Msa0547170:intron | 50.0% | |
| GGATCTGCATGTCGACAATG+GGG | - | chr4_1:39952030-39952049 | Msa0547170:intron | 50.0% | |
| !! | TCATTGTATGGTGGCGGAGG+TGG | - | chr4_1:39951648-39951667 | Msa0547170:CDS | 55.0% |
| ! | GGGTTTGCTTATCTGCCAGC+TGG | - | chr4_1:39952008-39952027 | Msa0547170:intron | 55.0% |
| TCTGCATGTCGACAATGGGG+CGG | - | chr4_1:39952033-39952052 | Msa0547170:intron | 55.0% | |
| CGTACGAGCAAGCCATTGCA+TGG | - | chr4_1:39952063-39952082 | Msa0547170:intron | 55.0% | |
| !! | TCATTGTATGGTGGCGGAGG+TGG | - | chr4_1:39951648-39951667 | Msa0547170:CDS | 55.0% |
| ! | GGGTTTGCTTATCTGCCAGC+TGG | - | chr4_1:39952008-39952027 | Msa0547170:intron | 55.0% |
| TCTGCATGTCGACAATGGGG+CGG | - | chr4_1:39952033-39952052 | Msa0547170:intron | 55.0% | |
| CGTACGAGCAAGCCATTGCA+TGG | - | chr4_1:39952063-39952082 | Msa0547170:intron | 55.0% | |
| CATGGCAACCCTCTGCACAG+AGG | + | chr4_1:39951307-39951326 | None:intergenic | 60.0% | |
| CTCTGTGCAGAGGGTTGCCA+TGG | - | chr4_1:39951305-39951324 | Msa0547170:three_prime_UTR | 60.0% | |
| GCCATGGCCATTTCTCCGTC+CGG | - | chr4_1:39951321-39951340 | Msa0547170:three_prime_UTR | 60.0% | |
| ACCGGACGGAGAAATGGCCA+TGG | + | chr4_1:39951325-39951344 | None:intergenic | 60.0% | |
| GTCGACATGCAGATCCCAGC+TGG | + | chr4_1:39952026-39952045 | None:intergenic | 60.0% | |
| CATGGCAACCCTCTGCACAG+AGG | + | chr4_1:39951307-39951326 | None:intergenic | 60.0% | |
| CTCTGTGCAGAGGGTTGCCA+TGG | - | chr4_1:39951305-39951324 | Msa0547170:three_prime_UTR | 60.0% | |
| GCCATGGCCATTTCTCCGTC+CGG | - | chr4_1:39951321-39951340 | Msa0547170:three_prime_UTR | 60.0% | |
| ACCGGACGGAGAAATGGCCA+TGG | + | chr4_1:39951325-39951344 | None:intergenic | 60.0% | |
| GTCGACATGCAGATCCCAGC+TGG | + | chr4_1:39952026-39952045 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 39951273 | 39952420 | 39951273 | ID=Msa0547170;Name=Msa0547170 |
| chr4_1 | mRNA | 39951273 | 39952420 | 39951273 | ID=Msa0547170-mRNA-1;Parent=Msa0547170;Name=Msa0547170-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.5|0.33|0.66|1|0.66|3|263|152 |
| chr4_1 | exon | 39951273 | 39951685 | 39951273 | ID=Msa0547170-mRNA-1:exon:10196;Parent=Msa0547170-mRNA-1 |
| chr4_1 | exon | 39951782 | 39951931 | 39951782 | ID=Msa0547170-mRNA-1:exon:10195;Parent=Msa0547170-mRNA-1 |
| chr4_1 | exon | 39952262 | 39952420 | 39952262 | ID=Msa0547170-mRNA-1:exon:10194;Parent=Msa0547170-mRNA-1 |
| chr4_1 | CDS | 39952262 | 39952420 | 39952262 | ID=Msa0547170-mRNA-1:cds;Parent=Msa0547170-mRNA-1 |
| chr4_1 | CDS | 39951782 | 39951931 | 39951782 | ID=Msa0547170-mRNA-1:cds;Parent=Msa0547170-mRNA-1 |
| chr4_1 | CDS | 39951536 | 39951685 | 39951536 | ID=Msa0547170-mRNA-1:cds;Parent=Msa0547170-mRNA-1 |
| chr4_1 | three_prime_UTR | 39951273 | 39951535 | 39951273 | ID=Msa0547170-mRNA-1:three_prime_utr;Parent=Msa0547170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
