Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0740800 | AET00180.1 | 88.284 | 606 | 56 | 3 | 26 | 619 | 1 | 603 | 0.0 | 986 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0740800 | G7KCV9 | 88.284 | 606 | 56 | 3 | 26 | 619 | 1 | 603 | 0.0 | 986 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa0740800 | 0.802786 | 4.755344e-49 | -8.615850e-47 |
| Msa0027770 | Msa0740800 | 0.810761 | 9.813172e-51 | -8.615850e-47 |
| Msa0054440 | Msa0740800 | 0.813237 | 2.832900e-51 | -8.615850e-47 |
| Msa0054480 | Msa0740800 | 0.805158 | 1.527916e-49 | -8.615850e-47 |
| Msa0059110 | Msa0740800 | 0.806254 | 8.995390e-50 | -8.615850e-47 |
| Msa0063530 | Msa0740800 | 0.804982 | 1.663364e-49 | -8.615850e-47 |
| Msa0070700 | Msa0740800 | 0.817281 | 3.576953e-52 | -8.615850e-47 |
| Msa0094470 | Msa0740800 | 0.806410 | 8.336898e-50 | -8.615850e-47 |
| Msa0099220 | Msa0740800 | 0.802329 | 5.906619e-49 | -8.615850e-47 |
| Msa0105620 | Msa0740800 | 0.830657 | 2.595323e-55 | -8.615850e-47 |
| Msa0118590 | Msa0740800 | 0.815769 | 7.799527e-52 | -8.615850e-47 |
| Msa0643570 | Msa0740800 | 0.803726 | 3.038591e-49 | -8.615850e-47 |
| Msa0685140 | Msa0740800 | 0.810211 | 1.290534e-50 | -8.615850e-47 |
| Msa0689260 | Msa0740800 | 0.820960 | 5.204040e-53 | -8.615850e-47 |
| Msa0711780 | Msa0740800 | 0.822249 | 2.620883e-53 | -8.615850e-47 |
| Msa0740800 | Msa0793800 | 0.804497 | 2.099654e-49 | -8.615850e-47 |
| Msa0740800 | Msa0794670 | 0.803472 | 3.429130e-49 | -8.615850e-47 |
| Msa0740800 | Msa0830540 | 0.816579 | 5.142844e-52 | -8.615850e-47 |
| Msa0740800 | Msa0831530 | 0.805511 | 1.288434e-49 | -8.615850e-47 |
| Msa0740800 | Msa0945440 | 0.806632 | 7.487574e-50 | -8.615850e-47 |
| Msa0740800 | Msa0989540 | 0.819365 | 1.206888e-52 | -8.615850e-47 |
| Msa0740800 | Msa1051200 | 0.800333 | 1.513940e-48 | -8.615850e-47 |
| Msa0740800 | Msa1137700 | 0.815534 | 8.799845e-52 | -8.615850e-47 |
| Msa0740800 | Msa1208880 | 0.809860 | 1.535431e-50 | -8.615850e-47 |
| Msa0740800 | Msa1209200 | 0.801191 | 1.011783e-48 | -8.615850e-47 |
| Msa0740800 | Msa1209760 | 0.801623 | 8.250664e-49 | -8.615850e-47 |
| Msa0740800 | Msa1245930 | 0.809329 | 1.996542e-50 | -8.615850e-47 |
| Msa0740800 | Msa1259060 | 0.820680 | 6.036728e-53 | -8.615850e-47 |
| Msa0740800 | Msa1358250 | 0.821509 | 3.888017e-53 | -8.615850e-47 |
| Msa0740800 | Msa1382560 | 0.806808 | 6.873040e-50 | -8.615850e-47 |
| Msa0740800 | Msa1386780 | 0.807989 | 3.859856e-50 | -8.615850e-47 |
| Msa0740800 | Msa1392780 | 0.812388 | 4.348045e-51 | -8.615850e-47 |
| Msa0740800 | Msa1394290 | 0.823639 | 1.242871e-53 | -8.615850e-47 |
| Msa0740800 | Msa1400580 | 0.829729 | 4.372397e-55 | -8.615850e-47 |
| Msa0740800 | Msa1411750 | 0.802121 | 6.518347e-49 | -8.615850e-47 |
| Msa0740800 | Msa1432420 | 0.802240 | 6.162116e-49 | -8.615850e-47 |
| Msa0740800 | Msa1457920 | 0.813984 | 1.940779e-51 | -8.615850e-47 |
| Msa0123360 | Msa0740800 | 0.806892 | 6.597198e-50 | -8.615850e-47 |
| Msa0127020 | Msa0740800 | 0.802881 | 4.546190e-49 | -8.615850e-47 |
| Msa0144370 | Msa0740800 | 0.828074 | 1.100544e-54 | -8.615850e-47 |
| Msa0159170 | Msa0740800 | 0.816689 | 4.857261e-52 | -8.615850e-47 |
| Msa0160550 | Msa0740800 | 0.816944 | 4.259553e-52 | -8.615850e-47 |
| Msa0165660 | Msa0740800 | 0.807388 | 5.178857e-50 | -8.615850e-47 |
| Msa0168230 | Msa0740800 | 0.845744 | 3.354922e-59 | -8.615850e-47 |
| Msa0169280 | Msa0740800 | 0.802394 | 5.727103e-49 | -8.615850e-47 |
| Msa0187120 | Msa0740800 | 0.805663 | 1.197647e-49 | -8.615850e-47 |
| Msa0189300 | Msa0740800 | 0.808149 | 3.569763e-50 | -8.615850e-47 |
| Msa0220720 | Msa0740800 | 0.801213 | 1.001041e-48 | -8.615850e-47 |
| Msa0279220 | Msa0740800 | 0.807111 | 5.927693e-50 | -8.615850e-47 |
| Msa0279240 | Msa0740800 | 0.814022 | 1.903897e-51 | -8.615850e-47 |
| Msa0318980 | Msa0740800 | 0.819057 | 1.418241e-52 | -8.615850e-47 |
| Msa0542090 | Msa0740800 | 0.825589 | 4.317066e-54 | -8.615850e-47 |
| Msa0542130 | Msa0740800 | 0.825863 | 3.715877e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0740800 | MtrunA17_Chr5g0441561 | 88.284 | 606 | 56 | 3 | 26 | 619 | 1 | 603 | 0.0 | 986 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0740800 | AT5G12220.1 | 34.181 | 629 | 333 | 16 | 40 | 619 | 15 | 611 | 4.25e-84 | 276 |
| Msa0740800 | AT5G12220.2 | 33.492 | 630 | 325 | 19 | 40 | 619 | 15 | 600 | 2.98e-74 | 249 |
Find 156 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGTTAAAATCTAATTAT+TGG | 0.155321 | 5_1:-60008385 | Msa0740800:CDS |
| TGCTCGTATTTCCTCAATTA+AGG | 0.222153 | 5_1:-60009220 | Msa0740800:intron |
| GGTATGTTGCCTCGGGTTCT+TGG | 0.234148 | 5_1:-60006437 | Msa0740800:CDS |
| ACCTTATGGTAGGTGGGATT+TGG | 0.251666 | 5_1:-60006175 | Msa0740800:CDS |
| GCATGGCTTGTTCGAATTCT+TGG | 0.266291 | 5_1:-60006851 | Msa0740800:CDS |
| CACGCATTGATTCTTCGAAT+TGG | 0.270810 | 5_1:+60006588 | None:intergenic |
| TAGAAGAAAGGTAATGAAAA+AGG | 0.273057 | 5_1:+60009873 | None:intergenic |
| GCGGCGGCTGCTGACGAAAA+AGG | 0.294854 | 5_1:-60009722 | Msa0740800:CDS |
| CTCCCAAGAAACCGATTAAA+AGG | 0.301927 | 5_1:-60007525 | Msa0740800:CDS |
| TTGGTTAAAATCTAATTATT+GGG | 0.303829 | 5_1:-60008384 | Msa0740800:CDS |
| ACAGCATTCACAATCCTTTC+GGG | 0.303935 | 5_1:+60009791 | None:intergenic |
| AACAGCATTCACAATCCTTT+CGG | 0.304654 | 5_1:+60009790 | None:intergenic |
| ATCTTTCTTCTTTGTTTGCA+TGG | 0.320771 | 5_1:-60006868 | Msa0740800:CDS |
| CCTCGGGTTCTTGGTTCATC+TGG | 0.322135 | 5_1:-60006428 | Msa0740800:CDS |
| AGGAGGTTCAGAAATAATTC+TGG | 0.323886 | 5_1:+60007310 | None:intergenic |
| CTTCAAACATTAGTAATAAC+AGG | 0.327512 | 5_1:+60005949 | None:intergenic |
| ATGAGGGAGACTGAAGAATT+TGG | 0.335005 | 5_1:-60006260 | Msa0740800:CDS |
| GGCATATTTGCTGCATTAGA+AGG | 0.335670 | 5_1:+60006821 | None:intergenic |
| GGCGCCGGCGGTGGTGGAAG+TGG | 0.345772 | 5_1:+60011266 | None:intergenic |
| ATCAGCCAAAACATTATCTA+TGG | 0.355267 | 5_1:+60007369 | None:intergenic |
| TTGCAGATAACCCAAGTATT+GGG | 0.356126 | 5_1:-60006928 | Msa0740800:intron |
| CATCAGAAAGGAAAGGGAAT+TGG | 0.365554 | 5_1:-60006358 | Msa0740800:CDS |
| TCCCACCATAGATAATGTTT+TGG | 0.377459 | 5_1:-60007374 | Msa0740800:CDS |
| TCAACCATGGAACTAGTTTA+CGG | 0.378487 | 5_1:+60011123 | None:intergenic |
| ATTATTTCTGAACCTCCTTA+AGG | 0.380267 | 5_1:-60007305 | Msa0740800:CDS |
| AACTAGTTCCATGGTTGAAC+TGG | 0.381866 | 5_1:-60011118 | Msa0740800:CDS |
| ACGCATTGATTCTTCGAATT+GGG | 0.385867 | 5_1:+60006589 | None:intergenic |
| GGATCTTGAAATCTCTTCTT+CGG | 0.386804 | 5_1:-60007504 | Msa0740800:CDS |
| GCGCCGGCGGTGGTGGAAGT+GGG | 0.389931 | 5_1:+60011267 | None:intergenic |
| GATACTTTCAGGCACTTGAT+TGG | 0.391649 | 5_1:-60008403 | Msa0740800:intron |
| GTCCAATTGGTATGTTGCCT+CGG | 0.393620 | 5_1:-60006445 | Msa0740800:CDS |
| GTTGCCGGCGCCGGCGGTGG+TGG | 0.399486 | 5_1:+60011260 | None:intergenic |
| AGAAGTTGTGTCTGTGCTGT+TGG | 0.402368 | 5_1:-60007461 | Msa0740800:CDS |
| TTTGCAGATAACCCAAGTAT+TGG | 0.418355 | 5_1:-60006929 | Msa0740800:intron |
| TCCTTAAGGAAGTTCTTCAT+AGG | 0.421724 | 5_1:-60007291 | Msa0740800:CDS |
| GAGTATGCAATCCCAATACT+TGG | 0.426224 | 5_1:+60006917 | None:intergenic |
| TGTATTCCGTAGCGAGTTTG+AGG | 0.429264 | 5_1:-60009904 | Msa0740800:CDS |
| TCCTCCATCTGAAGGGGAAA+GGG | 0.430119 | 5_1:+60011218 | None:intergenic |
| TCTTCATAGGATTGAAGCTC+GGG | 0.439750 | 5_1:-60007278 | Msa0740800:CDS |
| GTAGTTGCCGGCGCCGGCGG+TGG | 0.442513 | 5_1:+60011257 | None:intergenic |
| CAGGCCGGACACCTCTATAT+AGG | 0.444527 | 5_1:+60005990 | None:intergenic |
| CAGAAAGTTCAATTGCTCTC+TGG | 0.449961 | 5_1:-60006680 | Msa0740800:CDS |
| TCCTATGAAGAACTTCCTTA+AGG | 0.455483 | 5_1:+60007290 | None:intergenic |
| TTAGCAATCTGTTTGAAAGT+TGG | 0.455524 | 5_1:-60008281 | Msa0740800:CDS |
| ATGGAAGTGAAGGTAGTTGC+CGG | 0.457025 | 5_1:+60011245 | None:intergenic |
| ACCCGAGGCAACATACCAAT+TGG | 0.458699 | 5_1:+60006443 | None:intergenic |
| CAACCATGGAACTAGTTTAC+GGG | 0.468394 | 5_1:+60011124 | None:intergenic |
| AGTTCATGCAAAACCCTCTT+CGG | 0.468762 | 5_1:+60006800 | None:intergenic |
| TTATAAAATCTGAGTATGAC+AGG | 0.471238 | 5_1:+60007340 | None:intergenic |
| ACTTCCACCACCGCCGGCGC+CGG | 0.472672 | 5_1:-60011264 | Msa0740800:CDS |
| TCCAATTGGTATGTTGCCTC+GGG | 0.476101 | 5_1:-60006444 | Msa0740800:CDS |
| GGAAAATGAGTTGGGAGAAT+CGG | 0.477448 | 5_1:+60011061 | None:intergenic |
| ATCTGAAGGGGCATCTCGCT+TGG | 0.479158 | 5_1:+60006316 | None:intergenic |
| TCATGGAACCCATGTCCAAT+TGG | 0.480943 | 5_1:-60006458 | Msa0740800:CDS |
| GAAGATATGAAGTGTGAAGA+AGG | 0.481420 | 5_1:-60007256 | Msa0740800:intron |
| AAGAGCATCGGAAAATGAGT+TGG | 0.483916 | 5_1:+60011052 | None:intergenic |
| AGAGCATCGGAAAATGAGTT+GGG | 0.491230 | 5_1:+60011053 | None:intergenic |
| GCATTGTCTTCACCATGAAA+AGG | 0.491393 | 5_1:+60008341 | None:intergenic |
| AGAGGGGAAAGGATACCTTA+TGG | 0.493149 | 5_1:-60006189 | Msa0740800:CDS |
| CGTCCCCTTTCCCCTTCAGA+TGG | 0.494319 | 5_1:-60011222 | Msa0740800:CDS |
| ACTCAACTGTTAAGAAAATG+AGG | 0.498965 | 5_1:-60006277 | Msa0740800:CDS |
| TTATCGATAACATGAAGAAC+GGG | 0.500813 | 5_1:+60006398 | None:intergenic |
| TATCCTTTCCCCTCTTCCGT+TGG | 0.503895 | 5_1:+60006197 | None:intergenic |
| GGATAAATCTCCAACGGAAG+AGG | 0.505062 | 5_1:-60006207 | Msa0740800:CDS |
| CTATATAGAGGTGTCCGGCC+TGG | 0.505259 | 5_1:-60005989 | Msa0740800:three_prime_UTR |
| TCCAAATCCCACCTACCATA+AGG | 0.505361 | 5_1:+60006174 | None:intergenic |
| ATCAAGCATCAGAAAGGAAA+GGG | 0.510699 | 5_1:-60006364 | Msa0740800:CDS |
| GCAATCTGTTTGAAAGTTGG+CGG | 0.510725 | 5_1:-60008278 | Msa0740800:CDS |
| AGACTGAAGAAACAGAGGTA+TGG | 0.512103 | 5_1:-60006493 | Msa0740800:CDS |
| CTAGAAAACTAGTAGAAGAA+AGG | 0.512577 | 5_1:+60009861 | None:intergenic |
| TTCTAGTCACACCACTGTCG+AGG | 0.513916 | 5_1:-60011308 | None:intergenic |
| CCCCTTTCCCCTTCAGATGG+AGG | 0.514465 | 5_1:-60011219 | Msa0740800:CDS |
| CGATGAATCTCCAATGGAAG+AGG | 0.516545 | 5_1:-60006228 | Msa0740800:CDS |
| GTGAAGGTAGTTGCCGGCGC+CGG | 0.517661 | 5_1:+60011251 | None:intergenic |
| AGAAACAGAGGTATGGGCTC+TGG | 0.519677 | 5_1:-60006486 | Msa0740800:CDS |
| GGAGATTTATCCTCTTCCAT+TGG | 0.520251 | 5_1:+60006218 | None:intergenic |
| ATCACATCTCTGCGACAAGC+AGG | 0.521005 | 5_1:-60006756 | Msa0740800:CDS |
| GTCTAGTACCTTACTTCTCA+AGG | 0.521133 | 5_1:-60008246 | Msa0740800:CDS |
| GATAAATCTCCAACGGAAGA+GGG | 0.524186 | 5_1:-60006206 | Msa0740800:CDS |
| CAATCTGTTTGAAAGTTGGC+GGG | 0.528561 | 5_1:-60008277 | Msa0740800:CDS |
| AAAAGGCCTTCCACGCATGC+TGG | 0.529221 | 5_1:-60009705 | Msa0740800:CDS |
| GACTGAAGAAACAGAGGTAT+GGG | 0.529855 | 5_1:-60006492 | Msa0740800:CDS |
| AAAGGGGACGATGGAAGTGA+AGG | 0.531326 | 5_1:+60011235 | None:intergenic |
| GTGCTGTCTTTCTTCCCGAA+AGG | 0.531445 | 5_1:-60009805 | Msa0740800:CDS |
| AGCCAAAACATTATCTATGG+TGG | 0.538633 | 5_1:+60007372 | None:intergenic |
| GTGGTTCGTCCTCCATCTGA+AGG | 0.540408 | 5_1:+60011210 | None:intergenic |
| GATACCTATATAGAGGTGTC+CGG | 0.541931 | 5_1:-60005994 | Msa0740800:three_prime_UTR |
| TTCTTCATAGGATTGAAGCT+CGG | 0.542659 | 5_1:-60007279 | Msa0740800:CDS |
| GCTAAGTGAAGCTAAGCAGC+AGG | 0.544704 | 5_1:+60006086 | None:intergenic |
| AATGAGCCATACCTTAATTG+AGG | 0.545010 | 5_1:+60009209 | None:intergenic |
| AAGGTAGTTGCCGGCGCCGG+CGG | 0.547187 | 5_1:+60011254 | None:intergenic |
| TATCAACCAGCATGCGTGGA+AGG | 0.547615 | 5_1:+60009699 | None:intergenic |
| CTGAAGGGGAAAGGGGACGA+TGG | 0.547626 | 5_1:+60011226 | None:intergenic |
| GGATTATGATACCTATATAG+AGG | 0.548658 | 5_1:-60006001 | Msa0740800:three_prime_UTR |
| AACACAATCAAGCATCAGAA+AGG | 0.549443 | 5_1:-60006370 | Msa0740800:CDS |
| GTCCTCCATCTGAAGGGGAA+AGG | 0.551011 | 5_1:+60011217 | None:intergenic |
| ATGGAGGACGAACCACCGTT+AGG | 0.551759 | 5_1:-60011203 | Msa0740800:CDS |
| TGGTTCGTCCTCCATCTGAA+GGG | 0.558776 | 5_1:+60011211 | None:intergenic |
| ATCCCCACTTCCACCACCGC+CGG | 0.560878 | 5_1:-60011270 | Msa0740800:CDS |
| TATGGGCTCTGGCAAAGTCA+TGG | 0.561688 | 5_1:-60006475 | Msa0740800:CDS |
| CGCCGGCGGTGGTGGAAGTG+GGG | 0.562202 | 5_1:+60011268 | None:intergenic |
| AGTATGCAATCCCAATACTT+GGG | 0.562491 | 5_1:+60006918 | None:intergenic |
| GTCAAACCTCAAACTCGCTA+CGG | 0.564541 | 5_1:+60009898 | None:intergenic |
| CGAATATCAACCAGCATGCG+TGG | 0.566509 | 5_1:+60009695 | None:intergenic |
| AGCTACGCGTTTAAGAGCAT+CGG | 0.571819 | 5_1:+60011040 | None:intergenic |
| ATTCCCGTAAACTAGTTCCA+TGG | 0.572590 | 5_1:-60011127 | Msa0740800:CDS |
| TCTCTGCGACAAGCAGGTCA+TGG | 0.573508 | 5_1:-60006750 | Msa0740800:CDS |
| AAAGGATACCTTATGGTAGG+TGG | 0.574733 | 5_1:-60006182 | Msa0740800:CDS |
| GAGAAGTAAGGTACTAGACT+CGG | 0.574772 | 5_1:+60008250 | None:intergenic |
| AAAGGAATTGCTTTGCTCTG+AGG | 0.577350 | 5_1:+60008359 | None:intergenic |
| ATACGAGCAAGCTTGAGAGA+TGG | 0.578468 | 5_1:+60009234 | None:intergenic |
| AAAACGGGTGATGCTTCTGT+TGG | 0.580533 | 5_1:-60007397 | Msa0740800:CDS |
| ATTAAACGATGAATCTCCAA+TGG | 0.581110 | 5_1:-60006234 | Msa0740800:CDS |
| AGAACTTCGTTGAATCCTAA+CGG | 0.582261 | 5_1:+60011188 | None:intergenic |
| TCGAGTAGCTGAATATCTGA+AGG | 0.584840 | 5_1:+60006302 | None:intergenic |
| CACAACTTCTGAAGAGAAGG+AGG | 0.586748 | 5_1:+60007474 | None:intergenic |
| AGACACAACTTCTGAAGAGA+AGG | 0.587729 | 5_1:+60007471 | None:intergenic |
| GGCCTGGTTGAGTTATACAT+TGG | 0.589137 | 5_1:-60005973 | Msa0740800:three_prime_UTR |
| TCTCCAACGGAAGAGGGGAA+AGG | 0.590522 | 5_1:-60006200 | Msa0740800:CDS |
| GCCAAAACATTATCTATGGT+GGG | 0.590716 | 5_1:+60007373 | None:intergenic |
| TTTCAGAGGTATCACATCGT+GGG | 0.591314 | 5_1:-60009260 | Msa0740800:intron |
| GTTATCGATAACATGAAGAA+CGG | 0.591533 | 5_1:+60006397 | None:intergenic |
| AATCAAGCATCAGAAAGGAA+AGG | 0.596186 | 5_1:-60006365 | Msa0740800:CDS |
| CCTCCATCTGAAGGGGAAAG+GGG | 0.597136 | 5_1:+60011219 | None:intergenic |
| CGAGTAGCTGAATATCTGAA+GGG | 0.600315 | 5_1:+60006303 | None:intergenic |
| TGCAGCAAATATGCCGAAGA+GGG | 0.601191 | 5_1:-60006813 | Msa0740800:CDS |
| AATGTATAACTCAACCAGGC+CGG | 0.602644 | 5_1:+60005975 | None:intergenic |
| TCTAGTCACACCACTGTCGA+GGG | 0.604233 | 5_1:-60011307 | None:intergenic |
| AGAAGTAAGGTACTAGACTC+GGG | 0.605681 | 5_1:+60008251 | None:intergenic |
| TCTAGTACCTTACTTCTCAA+GGG | 0.609550 | 5_1:-60008245 | Msa0740800:CDS |
| TATGAAGAACTTCCTTAAGG+AGG | 0.611863 | 5_1:+60007293 | None:intergenic |
| CATGGTTGAACTGGAACGAG+TGG | 0.613194 | 5_1:-60011109 | Msa0740800:CDS |
| CGAAGAATGCTGAGAAGTCG+CGG | 0.624078 | 5_1:-60009766 | Msa0740800:CDS |
| CTCAACTGTTAAGAAAATGA+GGG | 0.626067 | 5_1:-60006276 | Msa0740800:CDS |
| GGAAGAGGATAAATCTCCAA+CGG | 0.627543 | 5_1:-60006213 | Msa0740800:CDS |
| AAGGATACCTTATGGTAGGT+GGG | 0.631201 | 5_1:-60006181 | Msa0740800:CDS |
| GGTTCGTCCTCCATCTGAAG+GGG | 0.632789 | 5_1:+60011212 | None:intergenic |
| ATGCAGCAAATATGCCGAAG+AGG | 0.638862 | 5_1:-60006814 | Msa0740800:CDS |
| GACCAATGTATAACTCAACC+AGG | 0.639014 | 5_1:+60005971 | None:intergenic |
| GGGAAAGGATACCTTATGGT+AGG | 0.643384 | 5_1:-60006185 | Msa0740800:CDS |
| CACTCGTTCCAGTTCAACCA+TGG | 0.643729 | 5_1:+60011110 | None:intergenic |
| GGCAACATACCAATTGGACA+TGG | 0.644160 | 5_1:+60006449 | None:intergenic |
| CCAGATGAACCAAGAACCCG+AGG | 0.645652 | 5_1:+60006428 | None:intergenic |
| TGGGATTTGGAAGAAAGTAA+CGG | 0.650098 | 5_1:-60006162 | Msa0740800:CDS |
| ATAAATCTCCAACGGAAGAG+GGG | 0.652995 | 5_1:-60006205 | Msa0740800:CDS |
| TTGTGAGACTGAAGAAACAG+AGG | 0.663335 | 5_1:-60006498 | Msa0740800:CDS |
| GAGTAGCTGAATATCTGAAG+GGG | 0.666409 | 5_1:+60006304 | None:intergenic |
| CGATAACATGAAGAACGGGA+AGG | 0.671753 | 5_1:+60006402 | None:intergenic |
| ATTTCAGAGGTATCACATCG+TGG | 0.672973 | 5_1:-60009261 | Msa0740800:intron |
| ATGCTGGTTGATATTCGTCA+CGG | 0.680659 | 5_1:-60009689 | Msa0740800:intron |
| GAAAGAATATACGACAATAG+CGG | 0.687272 | 5_1:-60009741 | Msa0740800:CDS |
| GCAACATACCAATTGGACAT+GGG | 0.692578 | 5_1:+60006450 | None:intergenic |
| TGTTAGAAGAGTCATCAACA+AGG | 0.707198 | 5_1:+60009835 | None:intergenic |
| AGAATATACGACAATAGCGG+CGG | 0.710334 | 5_1:-60009738 | Msa0740800:CDS |
| GATTTGGAAGAAAGTAACGG+AGG | 0.731702 | 5_1:-60006159 | Msa0740800:CDS |
| ACTTCGTTGAATCCTAACGG+TGG | 0.746330 | 5_1:+60011191 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTATTTTATTTAGAC+AGG | - | chr5_1:60007239-60007258 | Msa0740800:intron | 10.0% |
| !! | GAAACAAATTATAATTAAAT+AGG | + | chr5_1:60008704-60008723 | None:intergenic | 10.0% |
| !! | AAAAGAAATTAATTAAATTG+CGG | + | chr5_1:60009488-60009507 | None:intergenic | 10.0% |
| !!! | ATAAGTTTTTTTTTTTAGTT+AGG | - | chr5_1:60011188-60011207 | Msa0740800:CDS | 10.0% |
| !!! | TAAGTTTTTTTTTTTAGTTA+GGG | - | chr5_1:60011189-60011208 | Msa0740800:CDS | 10.0% |
| !!! | TCATTTTCTTAAATTACTAT+TGG | + | chr5_1:60006432-60006451 | None:intergenic | 15.0% |
| !!! | GATAAGAGTTTTTAATAATA+AGG | - | chr5_1:60007611-60007630 | Msa0740800:intron | 15.0% |
| !! | ATGTTTATATTCTAATATCA+TGG | + | chr5_1:60008584-60008603 | None:intergenic | 15.0% |
| !!! | TTAACTAGTGTTTATTTTAT+TGG | - | chr5_1:60008603-60008622 | Msa0740800:intron | 15.0% |
| !! | ATTGGTTAAAATCTAATTAT+TGG | - | chr5_1:60008826-60008845 | Msa0740800:intron | 15.0% |
| !! | TTGGTTAAAATCTAATTATT+GGG | - | chr5_1:60008827-60008846 | Msa0740800:intron | 15.0% |
| !!! | TTCAACATTAAAGTATTAAA+CGG | + | chr5_1:60009154-60009173 | None:intergenic | 15.0% |
| !! | TTATAAAAAATCTCAAGTAT+TGG | - | chr5_1:60009510-60009529 | Msa0740800:intron | 15.0% |
| !! | TATAAAAAATCTCAAGTATT+GGG | - | chr5_1:60009511-60009530 | Msa0740800:intron | 15.0% |
| !!! | ATCAGTAATAATTAATGTTT+TGG | - | chr5_1:60009629-60009648 | Msa0740800:intron | 15.0% |
| !!! | TCAGTAATAATTAATGTTTT+GGG | - | chr5_1:60009630-60009649 | Msa0740800:intron | 15.0% |
| !!! | AAATTTTTATGATTTCATGT+TGG | + | chr5_1:60010177-60010196 | None:intergenic | 15.0% |
| !! | TTGAAGAATAATTTCATGTT+TGG | - | chr5_1:60006541-60006560 | Msa0740800:CDS | 20.0% |
| !!! | GATTAACTTTATTTTAGCTT+TGG | + | chr5_1:60006760-60006779 | None:intergenic | 20.0% |
| !!! | CAAAATTTACCTGTTTTTTT+AGG | - | chr5_1:60006932-60006951 | Msa0740800:intron | 20.0% |
| !! | TTTGACAAATTTATCCAAAA+AGG | + | chr5_1:60007563-60007582 | None:intergenic | 20.0% |
| !! | AAGCAACAAAACTAAATTTA+TGG | + | chr5_1:60007767-60007786 | None:intergenic | 20.0% |
| !! | TTAAGACATCATTCTTTAAA+AGG | + | chr5_1:60008285-60008304 | None:intergenic | 20.0% |
| !!! | TGGGTTAACTATATTTTTTT+TGG | - | chr5_1:60008510-60008529 | Msa0740800:intron | 20.0% |
| !!! | CTTTTTTTATCAGTATAGAT+AGG | - | chr5_1:60008543-60008562 | Msa0740800:intron | 20.0% |
| !!! | AGTGTTTATTTTATTGGAAT+TGG | - | chr5_1:60008609-60008628 | Msa0740800:intron | 20.0% |
| !! | AGTGTTTATATTAAGATCTT+GGG | + | chr5_1:60008729-60008748 | None:intergenic | 20.0% |
| !! | AAAGAATAAAGTGATCTAAA+GGG | + | chr5_1:60009071-60009090 | None:intergenic | 20.0% |
| !! | TAAAGAATAAAGTGATCTAA+AGG | + | chr5_1:60009072-60009091 | None:intergenic | 20.0% |
| !!! | ACATGCCAAAATTTTAAATT+GGG | + | chr5_1:60009179-60009198 | None:intergenic | 20.0% |
| !!! | GTTATTTAATATTTTAGAGC+TGG | - | chr5_1:60009533-60009552 | Msa0740800:intron | 20.0% |
| ! | GTTACGAATACCTAAAAAAT+GGG | + | chr5_1:60006367-60006386 | None:intergenic | 25.0% |
| ! | TGTTACGAATACCTAAAAAA+TGG | + | chr5_1:60006368-60006387 | None:intergenic | 25.0% |
| ! | TTCTTAAATTACTATTGGTG+TGG | + | chr5_1:60006427-60006446 | None:intergenic | 25.0% |
| !!! | CAACAACTTACACATTTTTT+AGG | - | chr5_1:60006517-60006536 | Msa0740800:CDS | 25.0% |
| !!! | GTCAAACTGTTTTTTATGTA+AGG | - | chr5_1:60006630-60006649 | Msa0740800:CDS | 25.0% |
| ! | TAGAAGAAAGGTAATGAAAA+AGG | + | chr5_1:60007341-60007360 | None:intergenic | 25.0% |
| !! | AAAAAATCTTAGAGCCTTTT+TGG | - | chr5_1:60007546-60007565 | Msa0740800:intron | 25.0% |
| ! | GTATAAGTTATAACTTCCTT+CGG | - | chr5_1:60007657-60007676 | Msa0740800:intron | 25.0% |
| ! | AACATGATTAAAGATGCTAA+TGG | + | chr5_1:60007721-60007740 | None:intergenic | 25.0% |
| ! | CAATAAGTAAAACAAAAAGC+AGG | + | chr5_1:60007925-60007944 | None:intergenic | 25.0% |
| !! | TGACAATCTTTTTACTTCTT+TGG | - | chr5_1:60008048-60008067 | Msa0740800:intron | 25.0% |
| !! | GACAATCTTTTTACTTCTTT+GGG | - | chr5_1:60008049-60008068 | Msa0740800:intron | 25.0% |
| !! | TCATTCTTTAAAAGGTCAAA+GGG | + | chr5_1:60008277-60008296 | None:intergenic | 25.0% |
| !! | ATCATTCTTTAAAAGGTCAA+AGG | + | chr5_1:60008278-60008297 | None:intergenic | 25.0% |
| ! | AAAACCTCATTTGATATCAT+AGG | - | chr5_1:60008355-60008374 | Msa0740800:CDS | 25.0% |
| ! | GAGTGTTTATATTAAGATCT+TGG | + | chr5_1:60008730-60008749 | None:intergenic | 25.0% |
| ! | AAGTTACAACATGAAGAAAA+AGG | + | chr5_1:60009013-60009032 | None:intergenic | 25.0% |
| !!! | GAAAGCCCAATTTAAAATTT+TGG | - | chr5_1:60009171-60009190 | Msa0740800:intron | 25.0% |
| !! | CACATGCCAAAATTTTAAAT+TGG | + | chr5_1:60009180-60009199 | None:intergenic | 25.0% |
| !!! | CAATTTAAAATTTTGGCATG+TGG | - | chr5_1:60009178-60009197 | Msa0740800:intron | 25.0% |
| !! | TATTATCACAGGCTAAATTT+TGG | - | chr5_1:60009213-60009232 | Msa0740800:intron | 25.0% |
| !! | ATTATCACAGGCTAAATTTT+GGG | - | chr5_1:60009214-60009233 | Msa0740800:intron | 25.0% |
| !! | ATGTTTTCTCTTTGAATTCT+CGG | - | chr5_1:60009441-60009460 | Msa0740800:intron | 25.0% |
| !! | GATTTCAAGATCCTTTTAAT+CGG | + | chr5_1:60009700-60009719 | None:intergenic | 25.0% |
| ! | TTATAAAATCTGAGTATGAC+AGG | + | chr5_1:60009874-60009893 | None:intergenic | 25.0% |
| ! | CTTCAAACATTAGTAATAAC+AGG | + | chr5_1:60011265-60011284 | None:intergenic | 25.0% |
| ! | ATGATGATTTTGAATCGTCT+TGG | + | chr5_1:60006055-60006074 | None:intergenic | 30.0% |
| GCAGAAACATTACACAATTA+GGG | + | chr5_1:60006257-60006276 | None:intergenic | 30.0% | |
| AGCAGAAACATTACACAATT+AGG | + | chr5_1:60006258-60006277 | None:intergenic | 30.0% | |
| TGTGTAAGTTGTTGAAAAAG+TGG | + | chr5_1:60006511-60006530 | None:intergenic | 30.0% | |
| AAACAGTTTATAAGCGCTTA+TGG | - | chr5_1:60006702-60006721 | Msa0740800:CDS | 30.0% | |
| GCTTATGGTATATGTGTTTA+GGG | - | chr5_1:60006717-60006736 | Msa0740800:CDS | 30.0% | |
| GTTGTTGTACCTAAAAAAAC+AGG | + | chr5_1:60006944-60006963 | None:intergenic | 30.0% | |
| ACCATGAATAAAGTTGTGTT+TGG | - | chr5_1:60006968-60006987 | Msa0740800:intron | 30.0% | |
| TCCAAACACAACTTTATTCA+TGG | + | chr5_1:60006972-60006991 | None:intergenic | 30.0% | |
| GCTTAAGCAGTTATCATATA+AGG | - | chr5_1:60007017-60007036 | Msa0740800:intron | 30.0% | |
| AATAAGCCGAAAACAACTTA+TGG | - | chr5_1:60007140-60007159 | Msa0740800:intron | 30.0% | |
| ! | AGTTTGTTTGGAAGAACTTA+CGG | + | chr5_1:60007184-60007203 | None:intergenic | 30.0% |
| ! | TAAGCAATGATGAGTTTGTT+TGG | + | chr5_1:60007196-60007215 | None:intergenic | 30.0% |
| AAGAAAGGTAATGAAAAAGG+AGG | + | chr5_1:60007338-60007357 | None:intergenic | 30.0% | |
| CTAGAAAACTAGTAGAAGAA+AGG | + | chr5_1:60007353-60007372 | None:intergenic | 30.0% | |
| GAAAGAATATACGACAATAG+CGG | - | chr5_1:60007470-60007489 | Msa0740800:CDS | 30.0% | |
| TGGAAAAAATTATATGCCGA+AGG | + | chr5_1:60007676-60007695 | None:intergenic | 30.0% | |
| !!! | GGCATATAATTTTTTCCACA+AGG | - | chr5_1:60007678-60007697 | Msa0740800:intron | 30.0% |
| AAACTAAATATGAGACCTTG+TGG | + | chr5_1:60007696-60007715 | None:intergenic | 30.0% | |
| TTATAGAATAAGACGAAGCT+AGG | + | chr5_1:60007808-60007827 | None:intergenic | 30.0% | |
| GTATTTCCTCAATTAAGGTA+TGG | - | chr5_1:60007996-60008015 | Msa0740800:intron | 30.0% | |
| CTAACAACGTAACCAAATTA+TGG | + | chr5_1:60008106-60008125 | None:intergenic | 30.0% | |
| GTTAGCATTTAGGAAAGAAT+TGG | - | chr5_1:60008121-60008140 | Msa0740800:intron | 30.0% | |
| TGAGTGTATATATGTTTGTC+TGG | - | chr5_1:60008186-60008205 | Msa0740800:intron | 30.0% | |
| GAGAAGAGGATATTCTATAA+AGG | + | chr5_1:60008331-60008350 | None:intergenic | 30.0% | |
| ! | GATATCAAATGAGGTTTTCA+TGG | + | chr5_1:60008353-60008372 | None:intergenic | 30.0% |
| !! | ATATGTTTTTCGATAACGCA+TGG | - | chr5_1:60008654-60008673 | Msa0740800:intron | 30.0% |
| !! | TATGTTTTTCGATAACGCAT+GGG | - | chr5_1:60008655-60008674 | Msa0740800:intron | 30.0% |
| TTGAAAATACTTGGTATGGA+AGG | + | chr5_1:60008756-60008775 | None:intergenic | 30.0% | |
| ! | TGAGTTGAAAATACTTGGTA+TGG | + | chr5_1:60008760-60008779 | None:intergenic | 30.0% |
| ! | ATAGTCTTACTGATACTTTC+AGG | - | chr5_1:60008797-60008816 | Msa0740800:intron | 30.0% |
| TTAGCAATCTGTTTGAAAGT+TGG | - | chr5_1:60008930-60008949 | Msa0740800:intron | 30.0% | |
| ! | TTATCACAGGCTAAATTTTG+GGG | - | chr5_1:60009215-60009234 | Msa0740800:intron | 30.0% |
| AAAGAGATGAAGAAGAAAAC+AGG | + | chr5_1:60009291-60009310 | None:intergenic | 30.0% | |
| ! | TGTTTTATATGCCTTTTTGC+AGG | - | chr5_1:60009324-60009343 | Msa0740800:intron | 30.0% |
| ! | GTTTTATATGCCTTTTTGCA+GGG | - | chr5_1:60009325-60009344 | Msa0740800:intron | 30.0% |
| !! | ATCCTTTTAATCGGTTTCTT+GGG | + | chr5_1:60009691-60009710 | None:intergenic | 30.0% |
| CTCAGAGTTCAAAAAGAAAA+CGG | - | chr5_1:60009798-60009817 | Msa0740800:CDS | 30.0% | |
| TCAGAGTTCAAAAAGAAAAC+GGG | - | chr5_1:60009799-60009818 | Msa0740800:CDS | 30.0% | |
| ATCAGCCAAAACATTATCTA+TGG | + | chr5_1:60009845-60009864 | None:intergenic | 30.0% | |
| !!! | TAGATAATGTTTTGGCTGAT+TGG | - | chr5_1:60009845-60009864 | Msa0740800:CDS | 30.0% |
| !! | ATTATTTCTGAACCTCCTTA+AGG | - | chr5_1:60009906-60009925 | Msa0740800:CDS | 30.0% |
| ! | ATTTGAAACTTCCGATGTAA+AGG | + | chr5_1:60010011-60010030 | None:intergenic | 30.0% |
| TTCAAATCGCTTAATTGTTG+TGG | - | chr5_1:60010024-60010043 | Msa0740800:intron | 30.0% | |
| TCAAATCGCTTAATTGTTGT+GGG | - | chr5_1:60010025-60010044 | Msa0740800:intron | 30.0% | |
| !! | TATGATTTCATGTTGGCTTA+AGG | + | chr5_1:60010170-60010189 | None:intergenic | 30.0% |
| ! | ATCTTTCTTCTTTGTTTGCA+TGG | - | chr5_1:60010343-60010362 | Msa0740800:intron | 30.0% |
| TTATCGATAACATGAAGAAC+GGG | + | chr5_1:60010816-60010835 | None:intergenic | 30.0% | |
| GTTATCGATAACATGAAGAA+CGG | + | chr5_1:60010817-60010836 | None:intergenic | 30.0% | |
| ACTCAACTGTTAAGAAAATG+AGG | - | chr5_1:60010934-60010953 | Msa0740800:intron | 30.0% | |
| CTCAACTGTTAAGAAAATGA+GGG | - | chr5_1:60010935-60010954 | Msa0740800:intron | 30.0% | |
| ATTAAACGATGAATCTCCAA+TGG | - | chr5_1:60010977-60010996 | Msa0740800:intron | 30.0% | |
| GGATTATGATACCTATATAG+AGG | - | chr5_1:60011210-60011229 | Msa0740800:CDS | 30.0% | |
| AGAACTTCGTTGAATCCTAA+CGG | + | chr5_1:60006026-60006045 | None:intergenic | 35.0% | |
| ! | TCAACCATGGAACTAGTTTA+CGG | + | chr5_1:60006091-60006110 | None:intergenic | 35.0% |
| GTGTATGTAATCACATGTGT+CGG | - | chr5_1:60006463-60006482 | Msa0740800:CDS | 35.0% | |
| GTAAGTTGTTGAAAAAGTGG+TGG | + | chr5_1:60006508-60006527 | None:intergenic | 35.0% | |
| ! | CTATTCTTTAGAAGCTATCC+TGG | - | chr5_1:60006659-60006678 | Msa0740800:CDS | 35.0% |
| ATCATATAACAAGAAGCTCC+AGG | + | chr5_1:60006680-60006699 | None:intergenic | 35.0% | |
| CGCTTATGGTATATGTGTTT+AGG | - | chr5_1:60006716-60006735 | Msa0740800:CDS | 35.0% | |
| !! | TATTTTTGCAGATGCTATCC+TGG | - | chr5_1:60006802-60006821 | Msa0740800:CDS | 35.0% |
| TTTACAATAACAAGCTCTCC+AGG | + | chr5_1:60006823-60006842 | None:intergenic | 35.0% | |
| !! | GAGAGCTTGTTATTGTAAAC+TGG | - | chr5_1:60006824-60006843 | Msa0740800:CDS | 35.0% |
| AAATAGTCTCGCTAGTGTTT+AGG | - | chr5_1:60006891-60006910 | Msa0740800:CDS | 35.0% | |
| !! | TTTTGAAGAAGTGATGCAAC+TGG | + | chr5_1:60006917-60006936 | None:intergenic | 35.0% |
| ATGATAACTGCTTAAGCTAC+AGG | + | chr5_1:60007014-60007033 | None:intergenic | 35.0% | |
| ! | TTTTCACAAGTTAACCTCGA+AGG | - | chr5_1:60007109-60007128 | Msa0740800:intron | 35.0% |
| !! | CTTATTTTCAAAAGCCTTCG+AGG | + | chr5_1:60007126-60007145 | None:intergenic | 35.0% |
| !! | ACACGTCCATAAGTTGTTTT+CGG | + | chr5_1:60007149-60007168 | None:intergenic | 35.0% |
| AGACAGGATCTATCAAATGA+TGG | - | chr5_1:60007255-60007274 | Msa0740800:intron | 35.0% | |
| TGTTAGAAGAGTCATCAACA+AGG | + | chr5_1:60007379-60007398 | None:intergenic | 35.0% | |
| AACAGCATTCACAATCCTTT+CGG | + | chr5_1:60007424-60007443 | None:intergenic | 35.0% | |
| !!! | TTGTTGCTTTTGTAGCTAGA+AGG | - | chr5_1:60007778-60007797 | Msa0740800:intron | 35.0% |
| TTGCATGATGCTATGCTAAT+TGG | - | chr5_1:60007850-60007869 | Msa0740800:intron | 35.0% | |
| TGCATGATGCTATGCTAATT+GGG | - | chr5_1:60007851-60007870 | Msa0740800:intron | 35.0% | |
| !! | ACTTATTGCTGCTATTTCAG+AGG | - | chr5_1:60007937-60007956 | Msa0740800:intron | 35.0% |
| TGCTCGTATTTCCTCAATTA+AGG | - | chr5_1:60007991-60008010 | Msa0740800:intron | 35.0% | |
| AATGAGCCATACCTTAATTG+AGG | + | chr5_1:60008005-60008024 | None:intergenic | 35.0% | |
| TGGTTACGTTGTTAGCATTT+AGG | - | chr5_1:60008111-60008130 | Msa0740800:intron | 35.0% | |
| ! | TTCTCTAAAAGTGGCTTATC+AGG | + | chr5_1:60008228-60008247 | None:intergenic | 35.0% |
| ! | CAGATGATCTTCTCTAAAAG+TGG | + | chr5_1:60008237-60008256 | None:intergenic | 35.0% |
| AGGTCCTATGATATCAAATG+AGG | + | chr5_1:60008362-60008381 | None:intergenic | 35.0% | |
| CATTTGATATCATAGGACCT+TGG | - | chr5_1:60008362-60008381 | Msa0740800:CDS | 35.0% | |
| ACAACTTTGATACACAAGCT+AGG | + | chr5_1:60008467-60008486 | None:intergenic | 35.0% | |
| AATAGGTAACCACATGAATG+TGG | + | chr5_1:60008687-60008706 | None:intergenic | 35.0% | |
| ! | AGCAGTGAGTTGAAAATACT+TGG | + | chr5_1:60008765-60008784 | None:intergenic | 35.0% |
| ! | AGCAAAGCAATTCCTTTTCA+TGG | - | chr5_1:60008858-60008877 | Msa0740800:intron | 35.0% |
| TCTAGTACCTTACTTCTCAA+GGG | - | chr5_1:60008966-60008985 | Msa0740800:intron | 35.0% | |
| AGTTCTTTGGCTATTATCAC+AGG | - | chr5_1:60009202-60009221 | Msa0740800:intron | 35.0% | |
| ! | CTTTTACTAGTCCAAAGAGA+GGG | - | chr5_1:60009261-60009280 | Msa0740800:intron | 35.0% |
| TGATTTATAGCCCTGCAAAA+AGG | + | chr5_1:60009338-60009357 | None:intergenic | 35.0% | |
| TAGAGTTCTATCATGCTTAG+AGG | - | chr5_1:60009395-60009414 | Msa0740800:intron | 35.0% | |
| ! | TTGCGGAAAAAGTATAATCC+TGG | + | chr5_1:60009471-60009490 | None:intergenic | 35.0% |
| !! | GATCCTTTTAATCGGTTTCT+TGG | + | chr5_1:60009692-60009711 | None:intergenic | 35.0% |
| GGATCTTGAAATCTCTTCTT+CGG | - | chr5_1:60009707-60009726 | Msa0740800:CDS | 35.0% | |
| ! | CGTTTTCTTTTTGAACTCTG+AGG | + | chr5_1:60009800-60009819 | None:intergenic | 35.0% |
| ! | TCCCACCATAGATAATGTTT+TGG | - | chr5_1:60009837-60009856 | Msa0740800:CDS | 35.0% |
| GCCAAAACATTATCTATGGT+GGG | + | chr5_1:60009841-60009860 | None:intergenic | 35.0% | |
| AGCCAAAACATTATCTATGG+TGG | + | chr5_1:60009842-60009861 | None:intergenic | 35.0% | |
| AGGAGGTTCAGAAATAATTC+TGG | + | chr5_1:60009904-60009923 | None:intergenic | 35.0% | |
| TATGAAGAACTTCCTTAAGG+AGG | + | chr5_1:60009921-60009940 | None:intergenic | 35.0% | |
| TCCTTAAGGAAGTTCTTCAT+AGG | - | chr5_1:60009920-60009939 | Msa0740800:CDS | 35.0% | |
| TCCTATGAAGAACTTCCTTA+AGG | + | chr5_1:60009924-60009943 | None:intergenic | 35.0% | |
| TTCTTCATAGGATTGAAGCT+CGG | - | chr5_1:60009932-60009951 | Msa0740800:intron | 35.0% | |
| GAAGATATGAAGTGTGAAGA+AGG | - | chr5_1:60009955-60009974 | Msa0740800:intron | 35.0% | |
| ATATGAAGTGTGAAGAAGGT+AGG | - | chr5_1:60009959-60009978 | Msa0740800:intron | 35.0% | |
| ATGTAAAGGAGAAATGTGGT+CGG | + | chr5_1:60009997-60010016 | None:intergenic | 35.0% | |
| ACCACATTTCTCCTTTACAT+CGG | - | chr5_1:60009997-60010016 | Msa0740800:intron | 35.0% | |
| !!! | TGCTGATGGGAATGTTTTTT+TGG | - | chr5_1:60010136-60010155 | Msa0740800:intron | 35.0% |
| TTTCCATCCTTTAATTCAGC+TGG | - | chr5_1:60010194-60010213 | Msa0740800:intron | 35.0% | |
| TTCCATCCTTTAATTCAGCT+GGG | - | chr5_1:60010195-60010214 | Msa0740800:intron | 35.0% | |
| TTTGCAGATAACCCAAGTAT+TGG | - | chr5_1:60010282-60010301 | Msa0740800:intron | 35.0% | |
| TTGCAGATAACCCAAGTATT+GGG | - | chr5_1:60010283-60010302 | Msa0740800:intron | 35.0% | |
| AGTATGCAATCCCAATACTT+GGG | + | chr5_1:60010296-60010315 | None:intergenic | 35.0% | |
| !! | ACGCATTGATTCTTCGAATT+GGG | + | chr5_1:60010625-60010644 | None:intergenic | 35.0% |
| AACACAATCAAGCATCAGAA+AGG | - | chr5_1:60010841-60010860 | Msa0740800:intron | 35.0% | |
| AATCAAGCATCAGAAAGGAA+AGG | - | chr5_1:60010846-60010865 | Msa0740800:intron | 35.0% | |
| ATCAAGCATCAGAAAGGAAA+GGG | - | chr5_1:60010847-60010866 | Msa0740800:intron | 35.0% | |
| TGGGATTTGGAAGAAAGTAA+CGG | - | chr5_1:60011049-60011068 | Msa0740800:CDS | 35.0% | |
| ATTCCCGTAAACTAGTTCCA+TGG | - | chr5_1:60006084-60006103 | Msa0740800:three_prime_UTR | 40.0% | |
| ! | CAACCATGGAACTAGTTTAC+GGG | + | chr5_1:60006090-60006109 | None:intergenic | 40.0% |
| AACTAGTTCCATGGTTGAAC+TGG | - | chr5_1:60006093-60006112 | Msa0740800:three_prime_UTR | 40.0% | |
| ! | GGAAAATGAGTTGGGAGAAT+CGG | + | chr5_1:60006153-60006172 | None:intergenic | 40.0% |
| !! | AGAGCATCGGAAAATGAGTT+GGG | + | chr5_1:60006161-60006180 | None:intergenic | 40.0% |
| !! | AAGAGCATCGGAAAATGAGT+TGG | + | chr5_1:60006162-60006181 | None:intergenic | 40.0% |
| TGTAAACTGGAGACAGCTTA+TGG | - | chr5_1:60006837-60006856 | Msa0740800:CDS | 40.0% | |
| ACAGCATTCACAATCCTTTC+GGG | + | chr5_1:60007423-60007442 | None:intergenic | 40.0% | |
| AGAATATACGACAATAGCGG+CGG | - | chr5_1:60007473-60007492 | Msa0740800:CDS | 40.0% | |
| ! | ATGCTGGTTGATATTCGTCA+CGG | - | chr5_1:60007522-60007541 | Msa0740800:CDS | 40.0% |
| !! | ATTTCAGAGGTATCACATCG+TGG | - | chr5_1:60007950-60007969 | Msa0740800:intron | 40.0% |
| !! | TTTCAGAGGTATCACATCGT+GGG | - | chr5_1:60007951-60007970 | Msa0740800:intron | 40.0% |
| TGTGTGTGTGGTCCATAATT+TGG | - | chr5_1:60008091-60008110 | Msa0740800:intron | 40.0% | |
| ! | GGAACAAATTTTCTCTCCTG+AGG | - | chr5_1:60008142-60008161 | Msa0740800:intron | 40.0% |
| TTGTGTTAAACACAGACCTC+AGG | + | chr5_1:60008161-60008180 | None:intergenic | 40.0% | |
| GAATGATGTCTTAACTCCCT+TGG | - | chr5_1:60008291-60008310 | Msa0740800:CDS | 40.0% | |
| ! | ATGAGGTTTTCATGGAGAAG+AGG | + | chr5_1:60008345-60008364 | None:intergenic | 40.0% |
| AAGAGAAGCAGATGTTACCA+AGG | + | chr5_1:60008382-60008401 | None:intergenic | 40.0% | |
| CACATTGAAAATGCCTCTGA+TGG | + | chr5_1:60008405-60008424 | None:intergenic | 40.0% | |
| CTAACACAGCATACTCAAGT+TGG | + | chr5_1:60008428-60008447 | None:intergenic | 40.0% | |
| GAGTATGCTGTGTTAGAAAG+AGG | - | chr5_1:60008432-60008451 | Msa0740800:intron | 40.0% | |
| !! | CTGTGTTAGAAAGAGGCATT+TGG | - | chr5_1:60008439-60008458 | Msa0740800:intron | 40.0% |
| ! | CCAATAAGCTTTGTGCAGTA+CGG | + | chr5_1:60008493-60008512 | None:intergenic | 40.0% |
| CGTACTGCACAAAGCTTATT+GGG | - | chr5_1:60008491-60008510 | Msa0740800:intron | 40.0% | |
| GATACTTTCAGGCACTTGAT+TGG | - | chr5_1:60008808-60008827 | Msa0740800:intron | 40.0% | |
| AAAGGAATTGCTTTGCTCTG+AGG | + | chr5_1:60008855-60008874 | None:intergenic | 40.0% | |
| GCATTGTCTTCACCATGAAA+AGG | + | chr5_1:60008873-60008892 | None:intergenic | 40.0% | |
| GCAATCTGTTTGAAAGTTGG+CGG | - | chr5_1:60008933-60008952 | Msa0740800:intron | 40.0% | |
| CAATCTGTTTGAAAGTTGGC+GGG | - | chr5_1:60008934-60008953 | Msa0740800:intron | 40.0% | |
| ! | AGAAGTAAGGTACTAGACTC+GGG | + | chr5_1:60008963-60008982 | None:intergenic | 40.0% |
| ! | GAGAAGTAAGGTACTAGACT+CGG | + | chr5_1:60008964-60008983 | None:intergenic | 40.0% |
| GTCTAGTACCTTACTTCTCA+AGG | - | chr5_1:60008965-60008984 | Msa0740800:intron | 40.0% | |
| ! | ACGTTTTCCCTTGAGAAGTA+AGG | + | chr5_1:60008976-60008995 | None:intergenic | 40.0% |
| CAGACAAGTGTGTAAGACAT+TGG | + | chr5_1:60009039-60009058 | None:intergenic | 40.0% | |
| ATCGTATCTTAGATCCCATC+TGG | - | chr5_1:60009101-60009120 | Msa0740800:intron | 40.0% | |
| ATCTTAGATCCCATCTGGTT+TGG | - | chr5_1:60009106-60009125 | Msa0740800:intron | 40.0% | |
| TTTGGCATGTGGAAGTTCTT+TGG | - | chr5_1:60009189-60009208 | Msa0740800:intron | 40.0% | |
| ! | GCTTTTACTAGTCCAAAGAG+AGG | - | chr5_1:60009260-60009279 | Msa0740800:intron | 40.0% |
| TTTGCAGGGCTATAAATCAC+AGG | - | chr5_1:60009339-60009358 | Msa0740800:intron | 40.0% | |
| ! | CGGAAAAAGTATAATCCTGG+AGG | + | chr5_1:60009468-60009487 | None:intergenic | 40.0% |
| ! | AGAGCTGGTCTACAAGATAT+TGG | - | chr5_1:60009548-60009567 | Msa0740800:intron | 40.0% |
| CTCCCAAGAAACCGATTAAA+AGG | - | chr5_1:60009686-60009705 | Msa0740800:intron | 40.0% | |
| ! | AGACACAACTTCTGAAGAGA+AGG | + | chr5_1:60009743-60009762 | None:intergenic | 40.0% |
| TCTTCATAGGATTGAAGCTC+GGG | - | chr5_1:60009933-60009952 | Msa0740800:intron | 40.0% | |
| TCCGATGTAAAGGAGAAATG+TGG | + | chr5_1:60010001-60010020 | None:intergenic | 40.0% | |
| ! | TTTTGTACTGCACTGCTGAT+GGG | - | chr5_1:60010123-60010142 | Msa0740800:intron | 40.0% |
| TCCATCCTTTAATTCAGCTG+GGG | - | chr5_1:60010196-60010215 | Msa0740800:intron | 40.0% | |
| AAACACCCCAGCTGAATTAA+AGG | + | chr5_1:60010204-60010223 | None:intergenic | 40.0% | |
| GAGTATGCAATCCCAATACT+TGG | + | chr5_1:60010297-60010316 | None:intergenic | 40.0% | |
| ! | GGCATATTTGCTGCATTAGA+AGG | + | chr5_1:60010393-60010412 | None:intergenic | 40.0% |
| AGTTCATGCAAAACCCTCTT+CGG | + | chr5_1:60010414-60010433 | None:intergenic | 40.0% | |
| CAGAAAGTTCAATTGCTCTC+TGG | - | chr5_1:60010531-60010550 | Msa0740800:intron | 40.0% | |
| !! | CACGCATTGATTCTTCGAAT+TGG | + | chr5_1:60010626-60010645 | None:intergenic | 40.0% |
| TTGTGAGACTGAAGAAACAG+AGG | - | chr5_1:60010713-60010732 | Msa0740800:intron | 40.0% | |
| AGACTGAAGAAACAGAGGTA+TGG | - | chr5_1:60010718-60010737 | Msa0740800:intron | 40.0% | |
| ! | GACTGAAGAAACAGAGGTAT+GGG | - | chr5_1:60010719-60010738 | Msa0740800:intron | 40.0% |
| GCAACATACCAATTGGACAT+GGG | + | chr5_1:60010764-60010783 | None:intergenic | 40.0% | |
| CATCAGAAAGGAAAGGGAAT+TGG | - | chr5_1:60010853-60010872 | Msa0740800:intron | 40.0% | |
| GAGTAGCTGAATATCTGAAG+GGG | + | chr5_1:60010910-60010929 | None:intergenic | 40.0% | |
| CGAGTAGCTGAATATCTGAA+GGG | + | chr5_1:60010911-60010930 | None:intergenic | 40.0% | |
| TCGAGTAGCTGAATATCTGA+AGG | + | chr5_1:60010912-60010931 | None:intergenic | 40.0% | |
| ATGAGGGAGACTGAAGAATT+TGG | - | chr5_1:60010951-60010970 | Msa0740800:intron | 40.0% | |
| GGAGATTTATCCTCTTCCAT+TGG | + | chr5_1:60010996-60011015 | None:intergenic | 40.0% | |
| GGAAGAGGATAAATCTCCAA+CGG | - | chr5_1:60010998-60011017 | Msa0740800:intron | 40.0% | |
| GATAAATCTCCAACGGAAGA+GGG | - | chr5_1:60011005-60011024 | Msa0740800:intron | 40.0% | |
| ATAAATCTCCAACGGAAGAG+GGG | - | chr5_1:60011006-60011025 | Msa0740800:intron | 40.0% | |
| AAAGGATACCTTATGGTAGG+TGG | - | chr5_1:60011029-60011048 | Msa0740800:intron | 40.0% | |
| AAGGATACCTTATGGTAGGT+GGG | - | chr5_1:60011030-60011049 | Msa0740800:intron | 40.0% | |
| GATTTGGAAGAAAGTAACGG+AGG | - | chr5_1:60011052-60011071 | Msa0740800:CDS | 40.0% | |
| !! | GATACCTATATAGAGGTGTC+CGG | - | chr5_1:60011217-60011236 | Msa0740800:CDS | 40.0% |
| AATGTATAACTCAACCAGGC+CGG | + | chr5_1:60011239-60011258 | None:intergenic | 40.0% | |
| GACCAATGTATAACTCAACC+AGG | + | chr5_1:60011243-60011262 | None:intergenic | 40.0% | |
| ATGGAAGTGAAGGTAGTTGC+CGG | + | chr5_1:60005969-60005988 | None:intergenic | 45.0% | |
| ACTTCGTTGAATCCTAACGG+TGG | + | chr5_1:60006023-60006042 | None:intergenic | 45.0% | |
| ! | AGCTACGCGTTTAAGAGCAT+CGG | + | chr5_1:60006174-60006193 | None:intergenic | 45.0% |
| !! | CTGCTTTTCAGATTTCGACG+TGG | - | chr5_1:60006273-60006292 | Msa0740800:CDS | 45.0% |
| AGCAGTGACATCAATGAGCT+CGG | + | chr5_1:60006318-60006337 | None:intergenic | 45.0% | |
| CTACCTTGAAATTCAGCGCA+TGG | - | chr5_1:60006340-60006359 | Msa0740800:CDS | 45.0% | |
| !!! | AGCGCATGGACCCATTTTTT+AGG | - | chr5_1:60006354-60006373 | Msa0740800:CDS | 45.0% |
| TGTATTCCGTAGCGAGTTTG+AGG | - | chr5_1:60007307-60007326 | Msa0740800:CDS | 45.0% | |
| GTCAAACCTCAAACTCGCTA+CGG | + | chr5_1:60007316-60007335 | None:intergenic | 45.0% | |
| ATACGAGCAAGCTTGAGAGA+TGG | + | chr5_1:60007980-60007999 | None:intergenic | 45.0% | |
| TGTAAGCAAGTGTGTGTGTG+TGG | - | chr5_1:60008079-60008098 | Msa0740800:intron | 45.0% | |
| TGATGTCTTAACTCCCTTGG+TGG | - | chr5_1:60008294-60008313 | Msa0740800:CDS | 45.0% | |
| ATCTGCTTCTCTTCCATCAG+AGG | - | chr5_1:60008389-60008408 | Msa0740800:CDS | 45.0% | |
| CCGTACTGCACAAAGCTTAT+TGG | - | chr5_1:60008490-60008509 | Msa0740800:intron | 45.0% | |
| CAAACCAGACCAAACCAGAT+GGG | + | chr5_1:60009118-60009137 | None:intergenic | 45.0% | |
| TACTAGTCCAAAGAGAGGGT+AGG | - | chr5_1:60009265-60009284 | Msa0740800:intron | 45.0% | |
| GTTCTATCATGCTTAGAGGC+TGG | - | chr5_1:60009399-60009418 | Msa0740800:intron | 45.0% | |
| ! | CACAACTTCTGAAGAGAAGG+AGG | + | chr5_1:60009740-60009759 | None:intergenic | 45.0% |
| AGAAGTTGTGTCTGTGCTGT+TGG | - | chr5_1:60009750-60009769 | Msa0740800:CDS | 45.0% | |
| AAAACGGGTGATGCTTCTGT+TGG | - | chr5_1:60009814-60009833 | Msa0740800:CDS | 45.0% | |
| GCTTAATTGTTGTGGGTGCT+TGG | - | chr5_1:60010032-60010051 | Msa0740800:intron | 45.0% | |
| TTAAGCCCTAGACACTTCCA+CGG | - | chr5_1:60010100-60010119 | Msa0740800:intron | 45.0% | |
| !! | CAAAACCGTGGAAGTGTCTA+GGG | + | chr5_1:60010108-60010127 | None:intergenic | 45.0% |
| !! | ACAAAACCGTGGAAGTGTCT+AGG | + | chr5_1:60010109-60010128 | None:intergenic | 45.0% |
| ! | GTTTTGTACTGCACTGCTGA+TGG | - | chr5_1:60010122-60010141 | Msa0740800:intron | 45.0% |
| ACCCCAGCTGAATTAAAGGA+TGG | + | chr5_1:60010200-60010219 | None:intergenic | 45.0% | |
| !! | GCATGGCTTGTTCGAATTCT+TGG | - | chr5_1:60010360-60010379 | Msa0740800:intron | 45.0% |
| ATGCAGCAAATATGCCGAAG+AGG | - | chr5_1:60010397-60010416 | Msa0740800:intron | 45.0% | |
| TGCAGCAAATATGCCGAAGA+GGG | - | chr5_1:60010398-60010417 | Msa0740800:intron | 45.0% | |
| TCATGGAACCCATGTCCAAT+TGG | - | chr5_1:60010753-60010772 | Msa0740800:intron | 45.0% | |
| GGCAACATACCAATTGGACA+TGG | + | chr5_1:60010765-60010784 | None:intergenic | 45.0% | |
| GTCCAATTGGTATGTTGCCT+CGG | - | chr5_1:60010766-60010785 | Msa0740800:intron | 45.0% | |
| TCCAATTGGTATGTTGCCTC+GGG | - | chr5_1:60010767-60010786 | Msa0740800:intron | 45.0% | |
| CGATAACATGAAGAACGGGA+AGG | + | chr5_1:60010812-60010831 | None:intergenic | 45.0% | |
| CGATGAATCTCCAATGGAAG+AGG | - | chr5_1:60010983-60011002 | Msa0740800:intron | 45.0% | |
| GGATAAATCTCCAACGGAAG+AGG | - | chr5_1:60011004-60011023 | Msa0740800:intron | 45.0% | |
| AGAGGGGAAAGGATACCTTA+TGG | - | chr5_1:60011022-60011041 | Msa0740800:intron | 45.0% | |
| GGGAAAGGATACCTTATGGT+AGG | - | chr5_1:60011026-60011045 | Msa0740800:intron | 45.0% | |
| ACCTTATGGTAGGTGGGATT+TGG | - | chr5_1:60011036-60011055 | Msa0740800:intron | 45.0% | |
| TCCAAATCCCACCTACCATA+AGG | + | chr5_1:60011040-60011059 | None:intergenic | 45.0% | |
| GGCCTGGTTGAGTTATACAT+TGG | - | chr5_1:60011238-60011257 | Msa0740800:CDS | 45.0% | |
| CCATGAAAAACCCTCGACAG+TGG | + | chr5_1:60005917-60005936 | None:intergenic | 50.0% | |
| ! | CCACTGTCGAGGGTTTTTCA+TGG | - | chr5_1:60005914-60005933 | Msa0740800:three_prime_UTR | 50.0% |
| AAAGGGGACGATGGAAGTGA+AGG | + | chr5_1:60005979-60005998 | None:intergenic | 50.0% | |
| TCCTCCATCTGAAGGGGAAA+GGG | + | chr5_1:60005996-60006015 | None:intergenic | 50.0% | |
| TGGTTCGTCCTCCATCTGAA+GGG | + | chr5_1:60006003-60006022 | None:intergenic | 50.0% | |
| CACTCGTTCCAGTTCAACCA+TGG | + | chr5_1:60006104-60006123 | None:intergenic | 50.0% | |
| CATGGTTGAACTGGAACGAG+TGG | - | chr5_1:60006102-60006121 | Msa0740800:exon | 50.0% | |
| GCAGTGACATCAATGAGCTC+GGG | + | chr5_1:60006317-60006336 | None:intergenic | 50.0% | |
| GGTCCATGCGCTGAATTTCA+AGG | + | chr5_1:60006346-60006365 | None:intergenic | 50.0% | |
| GGTATTCGTAACACCGACAC+CGG | - | chr5_1:60006375-60006394 | Msa0740800:CDS | 50.0% | |
| GTGCTGTCTTTCTTCCCGAA+AGG | - | chr5_1:60007406-60007425 | Msa0740800:CDS | 50.0% | |
| CGAAGAATGCTGAGAAGTCG+CGG | - | chr5_1:60007445-60007464 | Msa0740800:CDS | 50.0% | |
| TATCAACCAGCATGCGTGGA+AGG | + | chr5_1:60007515-60007534 | None:intergenic | 50.0% | |
| CGAATATCAACCAGCATGCG+TGG | + | chr5_1:60007519-60007538 | None:intergenic | 50.0% | |
| GGATATACCACAGCCACCAA+GGG | + | chr5_1:60008310-60008329 | None:intergenic | 50.0% | |
| AGGATATACCACAGCCACCA+AGG | + | chr5_1:60008311-60008330 | None:intergenic | 50.0% | |
| GGGAATCAGCCACATTCATG+TGG | - | chr5_1:60008675-60008694 | Msa0740800:intron | 50.0% | |
| !! | AGATCCCATCTGGTTTGGTC+TGG | - | chr5_1:60009111-60009130 | Msa0740800:intron | 50.0% |
| CCAAACCAGACCAAACCAGA+TGG | + | chr5_1:60009119-60009138 | None:intergenic | 50.0% | |
| !! | CCATCTGGTTTGGTCTGGTT+TGG | - | chr5_1:60009116-60009135 | Msa0740800:intron | 50.0% |
| AAACAGGCCTACCCTCTCTT+TGG | + | chr5_1:60009275-60009294 | None:intergenic | 50.0% | |
| CTTTGAATTCTCGGTCCTCC+AGG | - | chr5_1:60009450-60009469 | Msa0740800:intron | 50.0% | |
| AGCAGTGCAGTACAAAACCG+TGG | + | chr5_1:60010120-60010139 | None:intergenic | 50.0% | |
| ATCACATCTCTGCGACAAGC+AGG | - | chr5_1:60010455-60010474 | Msa0740800:intron | 50.0% | |
| ! | AGAAACAGAGGTATGGGCTC+TGG | - | chr5_1:60010725-60010744 | Msa0740800:intron | 50.0% |
| ! | TATGGGCTCTGGCAAAGTCA+TGG | - | chr5_1:60010736-60010755 | Msa0740800:intron | 50.0% |
| ACCCGAGGCAACATACCAAT+TGG | + | chr5_1:60010771-60010790 | None:intergenic | 50.0% | |
| TATCCTTTCCCCTCTTCCGT+TGG | + | chr5_1:60011017-60011036 | None:intergenic | 50.0% | |
| GCTAAGTGAAGCTAAGCAGC+AGG | + | chr5_1:60011128-60011147 | None:intergenic | 50.0% | |
| CCTCCATCTGAAGGGGAAAG+GGG | + | chr5_1:60005995-60006014 | None:intergenic | 55.0% | |
| GTCCTCCATCTGAAGGGGAA+AGG | + | chr5_1:60005997-60006016 | None:intergenic | 55.0% | |
| GGTTCGTCCTCCATCTGAAG+GGG | + | chr5_1:60006002-60006021 | None:intergenic | 55.0% | |
| GTGGTTCGTCCTCCATCTGA+AGG | + | chr5_1:60006004-60006023 | None:intergenic | 55.0% | |
| ATGGAGGACGAACCACCGTT+AGG | - | chr5_1:60006008-60006027 | Msa0740800:three_prime_UTR | 55.0% | |
| ATTTCGACGTGGCGAACTCG+AGG | - | chr5_1:60006284-60006303 | Msa0740800:CDS | 55.0% | |
| ACGTGTGTCAGTGTCGTGAC+CGG | + | chr5_1:60006397-60006416 | None:intergenic | 55.0% | |
| AAAAGGCCTTCCACGCATGC+TGG | - | chr5_1:60007506-60007525 | Msa0740800:CDS | 55.0% | |
| ! | CTTAACTCCCTTGGTGGCTG+TGG | - | chr5_1:60008300-60008319 | Msa0740800:CDS | 55.0% |
| TCTCTGCGACAAGCAGGTCA+TGG | - | chr5_1:60010461-60010480 | Msa0740800:intron | 55.0% | |
| GGTATGTTGCCTCGGGTTCT+TGG | - | chr5_1:60010774-60010793 | Msa0740800:intron | 55.0% | |
| CCAGATGAACCAAGAACCCG+AGG | + | chr5_1:60010786-60010805 | None:intergenic | 55.0% | |
| CCTCGGGTTCTTGGTTCATC+TGG | - | chr5_1:60010783-60010802 | Msa0740800:intron | 55.0% | |
| !! | ATCTGAAGGGGCATCTCGCT+TGG | + | chr5_1:60010898-60010917 | None:intergenic | 55.0% |
| TCTCCAACGGAAGAGGGGAA+AGG | - | chr5_1:60011011-60011030 | Msa0740800:intron | 55.0% | |
| CAGGCCGGACACCTCTATAT+AGG | + | chr5_1:60011224-60011243 | None:intergenic | 55.0% | |
| !! | CTATATAGAGGTGTCCGGCC+TGG | - | chr5_1:60011222-60011241 | Msa0740800:CDS | 55.0% |
| CTGAAGGGGAAAGGGGACGA+TGG | + | chr5_1:60005988-60006007 | None:intergenic | 60.0% | |
| CGTCCCCTTTCCCCTTCAGA+TGG | - | chr5_1:60005989-60006008 | Msa0740800:three_prime_UTR | 60.0% | |
| CCCCTTTCCCCTTCAGATGG+AGG | - | chr5_1:60005992-60006011 | Msa0740800:three_prime_UTR | 60.0% | |
| GTCAGTGTCGTGACCGGTGT+CGG | + | chr5_1:60006391-60006410 | None:intergenic | 60.0% | |
| ATCCCCACTTCCACCACCGC+CGG | - | chr5_1:60005941-60005960 | Msa0740800:three_prime_UTR | 65.0% | |
| GTGAAGGTAGTTGCCGGCGC+CGG | + | chr5_1:60005963-60005982 | None:intergenic | 65.0% | |
| GCGGCGGCTGCTGACGAAAA+AGG | - | chr5_1:60007489-60007508 | Msa0740800:CDS | 65.0% | |
| ! | AAGGTAGTTGCCGGCGCCGG+CGG | + | chr5_1:60005960-60005979 | None:intergenic | 70.0% |
| !! | CGCCGGCGGTGGTGGAAGTG+GGG | + | chr5_1:60005946-60005965 | None:intergenic | 75.0% |
| !! | GCGCCGGCGGTGGTGGAAGT+GGG | + | chr5_1:60005947-60005966 | None:intergenic | 75.0% |
| ACTTCCACCACCGCCGGCGC+CGG | - | chr5_1:60005947-60005966 | Msa0740800:three_prime_UTR | 75.0% | |
| !!! | GGCGCCGGCGGTGGTGGAAG+TGG | + | chr5_1:60005948-60005967 | None:intergenic | 80.0% |
| !!! | GTAGTTGCCGGCGCCGGCGG+TGG | + | chr5_1:60005957-60005976 | None:intergenic | 80.0% |
| !!! | GTTGCCGGCGCCGGCGGTGG+TGG | + | chr5_1:60005954-60005973 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 60005908 | 60011325 | 60005908 | ID=Msa0740800;Name=Msa0740800 |
| chr5_1 | mRNA | 60005908 | 60011325 | 60005908 | ID=Msa0740800-mRNA-1;Parent=Msa0740800;Name=Msa0740800-mRNA-1;_AED=0.06;_eAED=0.07;_QI=25|0.8|0.83|1|1|1|6|207|619 |
| chr5_1 | exon | 60005908 | 60006944 | 60005908 | ID=Msa0740800-mRNA-1:exon:17346;Parent=Msa0740800-mRNA-1 |
| chr5_1 | exon | 60007257 | 60007547 | 60007257 | ID=Msa0740800-mRNA-1:exon:17345;Parent=Msa0740800-mRNA-1 |
| chr5_1 | exon | 60008240 | 60008414 | 60008240 | ID=Msa0740800-mRNA-1:exon:17344;Parent=Msa0740800-mRNA-1 |
| chr5_1 | exon | 60009221 | 60009276 | 60009221 | ID=Msa0740800-mRNA-1:exon:17343;Parent=Msa0740800-mRNA-1 |
| chr5_1 | exon | 60009690 | 60009942 | 60009690 | ID=Msa0740800-mRNA-1:exon:17342;Parent=Msa0740800-mRNA-1 |
| chr5_1 | exon | 60011046 | 60011325 | 60011046 | ID=Msa0740800-mRNA-1:exon:17341;Parent=Msa0740800-mRNA-1 |
| chr5_1 | five_prime_UTR | 60011301 | 60011325 | 60011301 | ID=Msa0740800-mRNA-1:five_prime_utr;Parent=Msa0740800-mRNA-1 |
| chr5_1 | CDS | 60011046 | 60011300 | 60011046 | ID=Msa0740800-mRNA-1:cds;Parent=Msa0740800-mRNA-1 |
| chr5_1 | CDS | 60009690 | 60009942 | 60009690 | ID=Msa0740800-mRNA-1:cds;Parent=Msa0740800-mRNA-1 |
| chr5_1 | CDS | 60009221 | 60009276 | 60009221 | ID=Msa0740800-mRNA-1:cds;Parent=Msa0740800-mRNA-1 |
| chr5_1 | CDS | 60008240 | 60008414 | 60008240 | ID=Msa0740800-mRNA-1:cds;Parent=Msa0740800-mRNA-1 |
| chr5_1 | CDS | 60007257 | 60007547 | 60007257 | ID=Msa0740800-mRNA-1:cds;Parent=Msa0740800-mRNA-1 |
| chr5_1 | CDS | 60006115 | 60006944 | 60006115 | ID=Msa0740800-mRNA-1:cds;Parent=Msa0740800-mRNA-1 |
| chr5_1 | three_prime_UTR | 60005908 | 60006114 | 60005908 | ID=Msa0740800-mRNA-1:three_prime_utr;Parent=Msa0740800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
