Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979050 | XP_003618769.1 | 93.840 | 487 | 9 | 3 | 1 | 467 | 1 | 486 | 0.0 | 923 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979050 | sp|Q9LY87|RGLG2_ARATH | 67.788 | 416 | 114 | 5 | 58 | 467 | 67 | 468 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979050 | G7KN55 | 93.840 | 487 | 9 | 3 | 1 | 467 | 1 | 486 | 0.0 | 923 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0979050 | -0.811440 | 6.992509e-51 | -8.615850e-47 |
| Msa0028940 | Msa0979050 | -0.804483 | 2.114219e-49 | -8.615850e-47 |
| Msa0030320 | Msa0979050 | -0.800826 | 1.201323e-48 | -8.615850e-47 |
| Msa0033970 | Msa0979050 | 0.818223 | 2.193157e-52 | -8.615850e-47 |
| Msa0036250 | Msa0979050 | -0.814978 | 1.169599e-51 | -8.615850e-47 |
| Msa0036620 | Msa0979050 | -0.816279 | 6.001294e-52 | -8.615850e-47 |
| Msa0038910 | Msa0979050 | -0.813080 | 3.067668e-51 | -8.615850e-47 |
| Msa0039890 | Msa0979050 | 0.834386 | 3.088412e-56 | -8.615850e-47 |
| Msa0045530 | Msa0979050 | -0.805899 | 1.068218e-49 | -8.615850e-47 |
| Msa0067750 | Msa0979050 | -0.813024 | 3.155064e-51 | -8.615850e-47 |
| Msa0069150 | Msa0979050 | -0.806166 | 9.387178e-50 | -8.615850e-47 |
| Msa0074860 | Msa0979050 | -0.816253 | 6.083577e-52 | -8.615850e-47 |
| Msa0081920 | Msa0979050 | 0.806323 | 8.697089e-50 | -8.615850e-47 |
| Msa0087550 | Msa0979050 | 0.833973 | 3.920043e-56 | -8.615850e-47 |
| Msa0093830 | Msa0979050 | -0.820788 | 5.700878e-53 | -8.615850e-47 |
| Msa0604690 | Msa0979050 | -0.806522 | 7.896137e-50 | -8.615850e-47 |
| Msa0614060 | Msa0979050 | -0.802099 | 6.589035e-49 | -8.615850e-47 |
| Msa0614290 | Msa0979050 | 0.824248 | 8.944722e-54 | -8.615850e-47 |
| Msa0621870 | Msa0979050 | -0.830827 | 2.358095e-55 | -8.615850e-47 |
| Msa0625820 | Msa0979050 | -0.803637 | 3.169748e-49 | -8.615850e-47 |
| Msa0625900 | Msa0979050 | -0.808720 | 2.696114e-50 | -8.615850e-47 |
| Msa0632040 | Msa0979050 | -0.804937 | 1.699868e-49 | -8.615850e-47 |
| Msa0638810 | Msa0979050 | 0.836267 | 1.034295e-56 | -8.615850e-47 |
| Msa0638820 | Msa0979050 | 0.825206 | 5.318461e-54 | -8.615850e-47 |
| Msa0639530 | Msa0979050 | -0.816595 | 5.098980e-52 | -8.615850e-47 |
| Msa0644610 | Msa0979050 | -0.816206 | 6.232015e-52 | -8.615850e-47 |
| Msa0649140 | Msa0979050 | -0.800569 | 1.355035e-48 | -8.615850e-47 |
| Msa0652700 | Msa0979050 | 0.827710 | 1.346272e-54 | -8.615850e-47 |
| Msa0660160 | Msa0979050 | -0.821920 | 3.123634e-53 | -8.615850e-47 |
| Msa0662670 | Msa0979050 | -0.803962 | 2.714061e-49 | -8.615850e-47 |
| Msa0663540 | Msa0979050 | -0.805243 | 1.466281e-49 | -8.615850e-47 |
| Msa0663580 | Msa0979050 | -0.804022 | 2.636641e-49 | -8.615850e-47 |
| Msa0663630 | Msa0979050 | -0.815131 | 1.081958e-51 | -8.615850e-47 |
| Msa0663690 | Msa0979050 | -0.806775 | 6.981772e-50 | -8.615850e-47 |
| Msa0666380 | Msa0979050 | -0.824035 | 1.003817e-53 | -8.615850e-47 |
| Msa0692710 | Msa0979050 | -0.842768 | 2.113274e-58 | -8.615850e-47 |
| Msa0697510 | Msa0979050 | 0.838189 | 3.334606e-57 | -8.615850e-47 |
| Msa0697520 | Msa0979050 | 0.819879 | 9.208581e-53 | -8.615850e-47 |
| Msa0703620 | Msa0979050 | -0.832010 | 1.206453e-55 | -8.615850e-47 |
| Msa0704790 | Msa0979050 | -0.829008 | 6.544996e-55 | -8.615850e-47 |
| Msa0708450 | Msa0979050 | -0.834905 | 2.287480e-56 | -8.615850e-47 |
| Msa0708870 | Msa0979050 | -0.804620 | 1.978964e-49 | -8.615850e-47 |
| Msa0719160 | Msa0979050 | -0.813485 | 2.499154e-51 | -8.615850e-47 |
| Msa0721650 | Msa0979050 | -0.809632 | 1.719239e-50 | -8.615850e-47 |
| Msa0738400 | Msa0979050 | 0.816852 | 4.465511e-52 | -8.615850e-47 |
| Msa0749500 | Msa0979050 | 0.842227 | 2.941879e-58 | -8.615850e-47 |
| Msa0749510 | Msa0979050 | 0.833817 | 4.289516e-56 | -8.615850e-47 |
| Msa0793910 | Msa0979050 | 0.830390 | 3.016831e-55 | -8.615850e-47 |
| Msa0802270 | Msa0979050 | -0.803899 | 2.797335e-49 | -8.615850e-47 |
| Msa0831430 | Msa0979050 | 0.839006 | 2.050953e-57 | -8.615850e-47 |
| Msa0840450 | Msa0979050 | -0.806663 | 7.372960e-50 | -8.615850e-47 |
| Msa0128030 | Msa0979050 | 0.836277 | 1.028353e-56 | -8.615850e-47 |
| Msa0129640 | Msa0979050 | 0.814772 | 1.299642e-51 | -8.615850e-47 |
| Msa0134270 | Msa0979050 | 0.832050 | 1.178864e-55 | -8.615850e-47 |
| Msa0138340 | Msa0979050 | -0.831425 | 1.681154e-55 | -8.615850e-47 |
| Msa0147960 | Msa0979050 | -0.831245 | 1.861697e-55 | -8.615850e-47 |
| Msa0163170 | Msa0979050 | -0.800532 | 1.378866e-48 | -8.615850e-47 |
| Msa0164580 | Msa0979050 | -0.804423 | 2.175921e-49 | -8.615850e-47 |
| Msa0172310 | Msa0979050 | -0.823465 | 1.364869e-53 | -8.615850e-47 |
| Msa0172820 | Msa0979050 | -0.815357 | 9.634574e-52 | -8.615850e-47 |
| Msa0180820 | Msa0979050 | 0.826923 | 2.077589e-54 | -8.615850e-47 |
| Msa0207150 | Msa0979050 | -0.806873 | 6.658257e-50 | -8.615850e-47 |
| Msa0224980 | Msa0979050 | -0.807277 | 5.467793e-50 | -8.615850e-47 |
| Msa0225030 | Msa0979050 | -0.808021 | 3.799938e-50 | -8.615850e-47 |
| Msa0232160 | Msa0979050 | -0.820031 | 8.501309e-53 | -8.615850e-47 |
| Msa0232170 | Msa0979050 | -0.810233 | 1.276499e-50 | -8.615850e-47 |
| Msa0236690 | Msa0979050 | -0.803404 | 3.543318e-49 | -8.615850e-47 |
| Msa0368620 | Msa0979050 | 0.808736 | 2.674404e-50 | -8.615850e-47 |
| Msa0381470 | Msa0979050 | 0.809468 | 1.864574e-50 | -8.615850e-47 |
| Msa0383110 | Msa0979050 | -0.819588 | 1.073500e-52 | -8.615850e-47 |
| Msa0388000 | Msa0979050 | -0.827151 | 1.833197e-54 | -8.615850e-47 |
| Msa0389710 | Msa0979050 | 0.812723 | 3.673007e-51 | -8.615850e-47 |
| Msa0404900 | Msa0979050 | -0.823438 | 1.385105e-53 | -8.615850e-47 |
| Msa0415860 | Msa0979050 | -0.809825 | 1.562618e-50 | -8.615850e-47 |
| Msa0450920 | Msa0979050 | -0.809954 | 1.465519e-50 | -8.615850e-47 |
| Msa0455830 | Msa0979050 | 0.857101 | 2.052605e-62 | -8.615850e-47 |
| Msa0475080 | Msa0979050 | -0.801748 | 7.778704e-49 | -8.615850e-47 |
| Msa0477660 | Msa0979050 | 0.808259 | 3.381579e-50 | -8.615850e-47 |
| Msa0480260 | Msa0979050 | 0.811121 | 8.201681e-51 | -8.615850e-47 |
| Msa0480770 | Msa0979050 | 0.814871 | 1.235219e-51 | -8.615850e-47 |
| Msa0481770 | Msa0979050 | 0.802413 | 5.678060e-49 | -8.615850e-47 |
| Msa0246470 | Msa0979050 | -0.810988 | 8.764230e-51 | -8.615850e-47 |
| Msa0246510 | Msa0979050 | -0.806977 | 6.327523e-50 | -8.615850e-47 |
| Msa0269660 | Msa0979050 | -0.810030 | 1.411625e-50 | -8.615850e-47 |
| Msa0274890 | Msa0979050 | -0.817211 | 3.708901e-52 | -8.615850e-47 |
| Msa0281310 | Msa0979050 | -0.802951 | 4.395924e-49 | -8.615850e-47 |
| Msa0291920 | Msa0979050 | 0.801524 | 8.644573e-49 | -8.615850e-47 |
| Msa0304070 | Msa0979050 | -0.800394 | 1.471546e-48 | -8.615850e-47 |
| Msa0305810 | Msa0979050 | -0.823978 | 1.035359e-53 | -8.615850e-47 |
| Msa0310260 | Msa0979050 | -0.813813 | 2.116399e-51 | -8.615850e-47 |
| Msa0310270 | Msa0979050 | -0.804248 | 2.366694e-49 | -8.615850e-47 |
| Msa0323790 | Msa0979050 | -0.801506 | 8.719398e-49 | -8.615850e-47 |
| Msa0341710 | Msa0979050 | -0.824033 | 1.005115e-53 | -8.615850e-47 |
| Msa0355630 | Msa0979050 | -0.806808 | 6.871413e-50 | -8.615850e-47 |
| Msa0358750 | Msa0979050 | -0.807103 | 5.952648e-50 | -8.615850e-47 |
| Msa0498250 | Msa0979050 | -0.804971 | 1.672268e-49 | -8.615850e-47 |
| Msa0508160 | Msa0979050 | 0.806802 | 6.892250e-50 | -8.615850e-47 |
| Msa0511930 | Msa0979050 | -0.803438 | 3.485545e-49 | -8.615850e-47 |
| Msa0516330 | Msa0979050 | -0.819612 | 1.060084e-52 | -8.615850e-47 |
| Msa0520480 | Msa0979050 | -0.807910 | 4.012855e-50 | -8.615850e-47 |
| Msa0521720 | Msa0979050 | 0.808746 | 2.661247e-50 | -8.615850e-47 |
| Msa0524570 | Msa0979050 | -0.820008 | 8.603468e-53 | -8.615850e-47 |
| Msa0527210 | Msa0979050 | -0.826904 | 2.099916e-54 | -8.615850e-47 |
| Msa0527420 | Msa0979050 | -0.809212 | 2.115149e-50 | -8.615850e-47 |
| Msa0538050 | Msa0979050 | -0.804662 | 1.939833e-49 | -8.615850e-47 |
| Msa0538100 | Msa0979050 | -0.813124 | 2.999554e-51 | -8.615850e-47 |
| Msa0548230 | Msa0979050 | -0.833178 | 6.192532e-56 | -8.615850e-47 |
| Msa0554700 | Msa0979050 | -0.823621 | 1.255349e-53 | -8.615850e-47 |
| Msa0560010 | Msa0979050 | -0.809404 | 1.924112e-50 | -8.615850e-47 |
| Msa0560280 | Msa0979050 | 0.820656 | 6.111640e-53 | -8.615850e-47 |
| Msa0562680 | Msa0979050 | -0.810217 | 1.286376e-50 | -8.615850e-47 |
| Msa0562740 | Msa0979050 | -0.800288 | 1.546110e-48 | -8.615850e-47 |
| Msa0563230 | Msa0979050 | -0.800277 | 1.554515e-48 | -8.615850e-47 |
| Msa0565930 | Msa0979050 | -0.808293 | 3.325711e-50 | -8.615850e-47 |
| Msa0567190 | Msa0979050 | -0.831156 | 1.958591e-55 | -8.615850e-47 |
| Msa0568300 | Msa0979050 | -0.833737 | 4.489870e-56 | -8.615850e-47 |
| Msa0572730 | Msa0979050 | -0.802576 | 5.253543e-49 | -8.615850e-47 |
| Msa0578400 | Msa0979050 | -0.827294 | 1.694184e-54 | -8.615850e-47 |
| Msa0585770 | Msa0979050 | -0.811335 | 7.372308e-51 | -8.615850e-47 |
| Msa0585810 | Msa0979050 | -0.819004 | 1.458487e-52 | -8.615850e-47 |
| Msa0876790 | Msa0979050 | 0.915221 | 7.615340e-85 | -8.615850e-47 |
| Msa0879820 | Msa0979050 | -0.805559 | 1.259274e-49 | -8.615850e-47 |
| Msa0917630 | Msa0979050 | -0.801215 | 1.000374e-48 | -8.615850e-47 |
| Msa0929440 | Msa0979050 | -0.822260 | 2.605328e-53 | -8.615850e-47 |
| Msa0930850 | Msa0979050 | -0.805321 | 1.412609e-49 | -8.615850e-47 |
| Msa0933050 | Msa0979050 | -0.802445 | 5.591188e-49 | -8.615850e-47 |
| Msa0935830 | Msa0979050 | 0.801839 | 7.451919e-49 | -8.615850e-47 |
| Msa0945230 | Msa0979050 | 0.815686 | 8.139964e-52 | -8.615850e-47 |
| Msa0967940 | Msa0979050 | -0.802245 | 6.148966e-49 | -8.615850e-47 |
| Msa0973000 | Msa0979050 | 0.804208 | 2.412081e-49 | -8.615850e-47 |
| Msa0979050 | Msa1014530 | -0.801586 | 8.395543e-49 | -8.615850e-47 |
| Msa0979050 | Msa1015020 | -0.831848 | 1.322392e-55 | -8.615850e-47 |
| Msa0979050 | Msa1015220 | -0.805264 | 1.451769e-49 | -8.615850e-47 |
| Msa0979050 | Msa1031620 | -0.803457 | 3.454257e-49 | -8.615850e-47 |
| Msa0979050 | Msa1037360 | 0.805284 | 1.437592e-49 | -8.615850e-47 |
| Msa0979050 | Msa1039650 | 0.823904 | 1.077621e-53 | -8.615850e-47 |
| Msa0979050 | Msa1055490 | -0.806154 | 9.442471e-50 | -8.615850e-47 |
| Msa0979050 | Msa1056590 | -0.828839 | 7.192716e-55 | -8.615850e-47 |
| Msa0979050 | Msa1056790 | -0.802615 | 5.157034e-49 | -8.615850e-47 |
| Msa0979050 | Msa1069770 | 0.800207 | 1.605796e-48 | -8.615850e-47 |
| Msa0979050 | Msa1085580 | -0.805069 | 1.594918e-49 | -8.615850e-47 |
| Msa0979050 | Msa1092770 | -0.808479 | 3.034678e-50 | -8.615850e-47 |
| Msa0979050 | Msa1118870 | -0.803722 | 3.043518e-49 | -8.615850e-47 |
| Msa0979050 | Msa1118890 | -0.803052 | 4.190553e-49 | -8.615850e-47 |
| Msa0979050 | Msa1127530 | -0.801209 | 1.003236e-48 | -8.615850e-47 |
| Msa0979050 | Msa1128230 | -0.802929 | 4.442803e-49 | -8.615850e-47 |
| Msa0979050 | Msa1130850 | -0.800331 | 1.515553e-48 | -8.615850e-47 |
| Msa0979050 | Msa1136770 | -0.801512 | 8.695430e-49 | -8.615850e-47 |
| Msa0979050 | Msa1143820 | -0.816240 | 6.123150e-52 | -8.615850e-47 |
| Msa0979050 | Msa1161060 | -0.811192 | 7.915799e-51 | -8.615850e-47 |
| Msa0979050 | Msa1164230 | 0.801014 | 1.099409e-48 | -8.615850e-47 |
| Msa0979050 | Msa1165330 | -0.801976 | 6.981426e-49 | -8.615850e-47 |
| Msa0979050 | Msa1174450 | 0.807087 | 5.997887e-50 | -8.615850e-47 |
| Msa0979050 | Msa1177300 | -0.804039 | 2.616052e-49 | -8.615850e-47 |
| Msa0979050 | Msa1184100 | -0.815003 | 1.154643e-51 | -8.615850e-47 |
| Msa0979050 | Msa1223520 | -0.802545 | 5.332669e-49 | -8.615850e-47 |
| Msa0979050 | Msa1223600 | -0.805641 | 1.210285e-49 | -8.615850e-47 |
| Msa0979050 | Msa1228260 | -0.800748 | 1.246231e-48 | -8.615850e-47 |
| Msa0979050 | Msa1229880 | -0.806932 | 6.468758e-50 | -8.615850e-47 |
| Msa0979050 | Msa1235960 | -0.815177 | 1.056793e-51 | -8.615850e-47 |
| Msa0979050 | Msa1235990 | -0.817252 | 3.630886e-52 | -8.615850e-47 |
| Msa0979050 | Msa1265990 | -0.820369 | 7.114759e-53 | -8.615850e-47 |
| Msa0979050 | Msa1267390 | -0.820677 | 6.044056e-53 | -8.615850e-47 |
| Msa0979050 | Msa1269370 | -0.816817 | 4.547619e-52 | -8.615850e-47 |
| Msa0979050 | Msa1271220 | -0.802900 | 4.504455e-49 | -8.615850e-47 |
| Msa0979050 | Msa1302340 | 0.812928 | 3.311381e-51 | -8.615850e-47 |
| Msa0979050 | Msa1303030 | -0.805368 | 1.380603e-49 | -8.615850e-47 |
| Msa0979050 | Msa1308430 | -0.807626 | 4.610040e-50 | -8.615850e-47 |
| Msa0979050 | Msa1315990 | -0.806531 | 7.862474e-50 | -8.615850e-47 |
| Msa0979050 | Msa1316090 | -0.823247 | 1.535150e-53 | -8.615850e-47 |
| Msa0979050 | Msa1317090 | -0.810966 | 8.863664e-51 | -8.615850e-47 |
| Msa0979050 | Msa1339520 | -0.825734 | 3.988186e-54 | -8.615850e-47 |
| Msa0979050 | Msa1348340 | -0.801526 | 8.637897e-49 | -8.615850e-47 |
| Msa0979050 | Msa1357090 | -0.806172 | 9.358564e-50 | -8.615850e-47 |
| Msa0979050 | Msa1368800 | -0.813814 | 2.115634e-51 | -8.615850e-47 |
| Msa0979050 | Msa1369220 | -0.805589 | 1.241018e-49 | -8.615850e-47 |
| Msa0979050 | Msa1371540 | -0.825235 | 5.235004e-54 | -8.615850e-47 |
| Msa0979050 | Msa1371690 | -0.804995 | 1.653037e-49 | -8.615850e-47 |
| Msa0979050 | Msa1372470 | -0.823885 | 1.088451e-53 | -8.615850e-47 |
| Msa0979050 | Msa1376230 | -0.811641 | 6.323220e-51 | -8.615850e-47 |
| Msa0979050 | Msa1377980 | -0.809835 | 1.555035e-50 | -8.615850e-47 |
| Msa0979050 | Msa1382100 | -0.808943 | 2.415819e-50 | -8.615850e-47 |
| Msa0979050 | Msa1405990 | -0.830148 | 3.456521e-55 | -8.615850e-47 |
| Msa0979050 | Msa1408280 | -0.808784 | 2.612210e-50 | -8.615850e-47 |
| Msa0979050 | Msa1412410 | 0.812200 | 4.779285e-51 | -8.615850e-47 |
| Msa0979050 | Msa1412830 | -0.806427 | 8.271870e-50 | -8.615850e-47 |
| Msa0979050 | Msa1427860 | 0.817770 | 2.775919e-52 | -8.615850e-47 |
| Msa0979050 | Msa1434850 | -0.812575 | 3.956692e-51 | -8.615850e-47 |
| Msa0979050 | Msa1434860 | -0.807277 | 5.468870e-50 | -8.615850e-47 |
| Msa0979050 | Msa1449510 | -0.800594 | 1.339337e-48 | -8.615850e-47 |
| Msa0979050 | Msa1452800 | -0.828643 | 8.021687e-55 | -8.615850e-47 |
| Msa0979050 | Msa1465950 | -0.808878 | 2.494533e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979050 | MtrunA17_Chr6g0458051 | 93.840 | 487 | 9 | 3 | 1 | 467 | 1 | 486 | 0.0 | 923 |
| Msa0979050 | MtrunA17_Chr7g0226791 | 67.078 | 486 | 100 | 8 | 1 | 467 | 1 | 445 | 0.0 | 605 |
| Msa0979050 | MtrunA17_Chr3g0123481 | 61.765 | 476 | 141 | 9 | 1 | 467 | 27 | 470 | 0.0 | 550 |
| Msa0979050 | MtrunA17_Chr8g0381321 | 61.297 | 478 | 145 | 7 | 1 | 467 | 27 | 475 | 0.0 | 548 |
| Msa0979050 | MtrunA17_Chr3g0116661 | 65.174 | 402 | 132 | 3 | 67 | 467 | 41 | 435 | 0.0 | 531 |
| Msa0979050 | MtrunA17_Chr3g0130411 | 58.556 | 374 | 136 | 3 | 98 | 467 | 79 | 437 | 5.96e-155 | 447 |
| Msa0979050 | MtrunA17_Chr2g0309791 | 56.216 | 370 | 140 | 4 | 99 | 467 | 67 | 415 | 8.41e-146 | 423 |
| Msa0979050 | MtrunA17_Chr2g0309781 | 56.098 | 369 | 136 | 4 | 99 | 467 | 59 | 401 | 1.37e-142 | 414 |
| Msa0979050 | MtrunA17_Chr8g0356381 | 57.373 | 373 | 134 | 5 | 100 | 467 | 53 | 405 | 3.86e-138 | 403 |
| Msa0979050 | MtrunA17_Chr6g0488261 | 66.429 | 280 | 92 | 1 | 100 | 379 | 2 | 279 | 5.73e-136 | 394 |
| Msa0979050 | MtrunA17_Chr2g0309821 | 65.125 | 281 | 98 | 0 | 99 | 379 | 53 | 333 | 1.60e-132 | 387 |
| Msa0979050 | MtrunA17_Chr6g0488251 | 54.799 | 323 | 120 | 4 | 145 | 467 | 9 | 305 | 2.12e-118 | 349 |
| Msa0979050 | MtrunA17_Chr7g0250181 | 72.000 | 175 | 33 | 2 | 159 | 317 | 11 | 185 | 6.44e-83 | 253 |
| Msa0979050 | MtrunA17_Chr7g0250151 | 70.248 | 121 | 36 | 0 | 141 | 261 | 4 | 124 | 1.77e-54 | 178 |
| Msa0979050 | MtrunA17_Chr8g0385701 | 32.867 | 286 | 147 | 10 | 91 | 356 | 308 | 568 | 1.26e-24 | 107 |
| Msa0979050 | MtrunA17_Chr7g0250161 | 67.647 | 68 | 20 | 1 | 259 | 324 | 17 | 84 | 4.58e-23 | 94.7 |
| Msa0979050 | MtrunA17_Chr1g0170101 | 30.000 | 250 | 132 | 7 | 127 | 356 | 298 | 524 | 1.13e-19 | 91.7 |
| Msa0979050 | MtrunA17_Chr7g0273401 | 30.303 | 198 | 103 | 7 | 129 | 308 | 1 | 181 | 3.45e-18 | 82.4 |
| Msa0979050 | MtrunA17_Chr7g0273481 | 28.000 | 275 | 147 | 10 | 127 | 380 | 338 | 582 | 1.63e-17 | 85.1 |
| Msa0979050 | MtrunA17_Chr7g0250171 | 46.774 | 124 | 40 | 5 | 330 | 450 | 4 | 104 | 3.28e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979050 | AT5G14420.3 | 67.788 | 416 | 114 | 5 | 58 | 467 | 67 | 468 | 0.0 | 546 |
| Msa0979050 | AT5G14420.2 | 67.788 | 416 | 114 | 5 | 58 | 467 | 67 | 468 | 0.0 | 546 |
| Msa0979050 | AT5G14420.4 | 67.788 | 416 | 114 | 5 | 58 | 467 | 67 | 468 | 0.0 | 546 |
| Msa0979050 | AT5G14420.1 | 67.788 | 416 | 114 | 5 | 58 | 467 | 67 | 468 | 0.0 | 546 |
| Msa0979050 | AT3G01650.2 | 65.802 | 424 | 104 | 7 | 56 | 467 | 95 | 489 | 0.0 | 543 |
| Msa0979050 | AT3G01650.1 | 65.802 | 424 | 104 | 7 | 56 | 467 | 95 | 489 | 0.0 | 543 |
| Msa0979050 | AT1G67800.4 | 65.873 | 378 | 119 | 2 | 95 | 467 | 61 | 433 | 0.0 | 517 |
| Msa0979050 | AT1G67800.1 | 65.873 | 378 | 119 | 2 | 95 | 467 | 61 | 433 | 0.0 | 517 |
| Msa0979050 | AT1G67800.3 | 65.873 | 378 | 119 | 2 | 95 | 467 | 61 | 433 | 0.0 | 517 |
| Msa0979050 | AT1G67800.6 | 65.873 | 378 | 119 | 2 | 95 | 467 | 61 | 433 | 0.0 | 517 |
| Msa0979050 | AT1G67800.2 | 65.873 | 378 | 119 | 2 | 95 | 467 | 81 | 453 | 0.0 | 515 |
| Msa0979050 | AT1G67800.5 | 70.370 | 324 | 91 | 1 | 95 | 418 | 81 | 399 | 2.89e-169 | 482 |
| Msa0979050 | AT5G63970.2 | 56.568 | 373 | 149 | 3 | 96 | 467 | 6 | 366 | 2.76e-145 | 420 |
| Msa0979050 | AT5G63970.1 | 56.568 | 373 | 149 | 3 | 96 | 467 | 6 | 366 | 2.76e-145 | 420 |
| Msa0979050 | AT1G79380.1 | 53.191 | 376 | 157 | 3 | 92 | 467 | 44 | 400 | 3.64e-139 | 405 |
| Msa0979050 | AT1G24545.1 | 53.211 | 109 | 13 | 1 | 142 | 250 | 46 | 116 | 7.99e-29 | 112 |
| Msa0979050 | AT5G61910.4 | 30.627 | 271 | 136 | 11 | 111 | 354 | 1087 | 1332 | 1.29e-21 | 99.0 |
| Msa0979050 | AT5G07300.1 | 30.216 | 278 | 144 | 11 | 103 | 354 | 314 | 567 | 3.58e-21 | 97.1 |
| Msa0979050 | AT5G61900.3 | 31.111 | 270 | 136 | 11 | 111 | 354 | 319 | 564 | 4.06e-20 | 93.6 |
| Msa0979050 | AT5G61900.1 | 31.111 | 270 | 136 | 11 | 111 | 354 | 319 | 564 | 4.06e-20 | 93.6 |
| Msa0979050 | AT1G08860.1 | 29.299 | 314 | 163 | 12 | 77 | 369 | 302 | 577 | 5.21e-20 | 93.6 |
Find 157 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTCTGCTTCTTCTTCT+TGG | 0.074743 | 6_4:+15377112 | Msa0979050:CDS |
| TTTCTCTTTCTGGTGGATTT+TGG | 0.107041 | 6_4:+15376924 | Msa0979050:five_prime_UTR |
| AAGACGGAATTTCCAGATTT+TGG | 0.147640 | 6_4:+15380858 | Msa0979050:three_prime_UTR |
| CCTCAAATTATTATCCTCTT+TGG | 0.233549 | 6_4:-15377064 | None:intergenic |
| GAACAGGCAATATCCATTAT+TGG | 0.248847 | 6_4:+15377936 | Msa0979050:CDS |
| TATATGGTTGTATAAAATAT+TGG | 0.253489 | 6_4:+15380627 | Msa0979050:three_prime_UTR |
| GTTCCTAATATTAAACTTGC+AGG | 0.259940 | 6_4:+15378204 | Msa0979050:CDS |
| GAGTCTTCCAATCTTATTCT+TGG | 0.276878 | 6_4:+15377723 | Msa0979050:CDS |
| AGACCTGCAAGTTTAATATT+AGG | 0.284619 | 6_4:-15378207 | None:intergenic |
| TTTGGTACTTCAAAACCTTA+TGG | 0.290222 | 6_4:+15379456 | Msa0979050:CDS |
| TCTTATGGTTCGGCGTCTTT+TGG | 0.304213 | 6_4:+15379438 | Msa0979050:CDS |
| GATAACTTGATTCCTTGTTT+TGG | 0.309163 | 6_4:+15377984 | Msa0979050:CDS |
| AATGGATATTGCCTGTTCAT+AGG | 0.310815 | 6_4:-15377931 | None:intergenic |
| CTTTGCACCCATTGTTGAAA+TGG | 0.321773 | 6_4:+15378338 | Msa0979050:CDS |
| CCTCCTCCTCCGCAAAACTA+TGG | 0.332154 | 6_4:+15377261 | Msa0979050:CDS |
| GGAAATTCCTTCTCAGTATA+AGG | 0.336846 | 6_4:+15379233 | Msa0979050:CDS |
| TACTGAGCAGCATCTTCTAT+TGG | 0.344380 | 6_4:+15380570 | Msa0979050:exon |
| AAGGAGATAAGTGGGGTGTT+AGG | 0.345247 | 6_4:+15376950 | Msa0979050:five_prime_UTR |
| CAGAGAATTGAGTTGATTGA+TGG | 0.354662 | 6_4:+15377029 | Msa0979050:exon |
| ATAAGTGGGGTGTTAGGAAT+TGG | 0.363717 | 6_4:+15376956 | Msa0979050:five_prime_UTR |
| ATTTCCTCTTTCGATCATAT+TGG | 0.366765 | 6_4:+15378937 | Msa0979050:CDS |
| TTCATATCCGGACCCTCATT+CGG | 0.368752 | 6_4:+15377137 | Msa0979050:CDS |
| GTCATTCATCTTCCACAATC+AGG | 0.371807 | 6_4:+15375960 | Msa0979050:five_prime_UTR |
| AACAGGCAATATCCATTATT+GGG | 0.375499 | 6_4:+15377937 | Msa0979050:CDS |
| GGGTGTTAGGAATTGGAATT+CGG | 0.376712 | 6_4:+15376963 | Msa0979050:five_prime_UTR |
| ATTTGCTCTCGCAGCATTGA+TGG | 0.382499 | 6_4:+15379212 | Msa0979050:CDS |
| TTGAAAACGTGAAAAGTTGC+TGG | 0.384082 | 6_4:-15375861 | None:intergenic |
| GGAGGTCGGGCATCATAATA+TGG | 0.386227 | 6_4:-15377240 | None:intergenic |
| TTGGTTTGACAGCTTAGCTT+AGG | 0.394826 | 6_4:+15380755 | Msa0979050:three_prime_UTR |
| ATCAATTCCAAGAATAAGAT+TGG | 0.395299 | 6_4:-15377730 | None:intergenic |
| TGTTGTGAATCATAAGTATA+AGG | 0.399777 | 6_4:-15377183 | None:intergenic |
| TTCTTCTTGGAATTCATATC+CGG | 0.401443 | 6_4:+15377125 | Msa0979050:CDS |
| TGGAGGCCAATACCATGTTT+TGG | 0.401526 | 6_4:+15378383 | Msa0979050:CDS |
| CCATTGCAAAATCTTTCATC+TGG | 0.405804 | 6_4:-15378147 | None:intergenic |
| TCATATCCGGACCCTCATTC+GGG | 0.412709 | 6_4:+15377138 | Msa0979050:CDS |
| GCCCTCCCAACACCCTCTTA+TGG | 0.418141 | 6_4:+15379423 | Msa0979050:CDS |
| CAATGGATGTTGGAATATAC+TGG | 0.423090 | 6_4:-15375938 | None:intergenic |
| TTGTTGTAATTGTTGTGATT+TGG | 0.425525 | 6_4:+15376999 | Msa0979050:five_prime_UTR |
| GTTAATGGGGCTCCTGCAGA+TGG | 0.427280 | 6_4:-15380532 | None:intergenic |
| TACTTCAAAACCTTATGGTT+CGG | 0.427815 | 6_4:+15379461 | Msa0979050:CDS |
| TTGTCAGAAACCAAAATGAA+TGG | 0.429471 | 6_4:-15380730 | None:intergenic |
| TTGCGGAGGAGGAGGAGGTC+GGG | 0.429594 | 6_4:-15377253 | None:intergenic |
| GTCATGGCCATTTCAACAAT+GGG | 0.437074 | 6_4:-15378345 | None:intergenic |
| AAGTTCTACTTATGAAAATC+AGG | 0.441934 | 6_4:+15379602 | Msa0979050:CDS |
| TGTCAGAAACCAAAATGAAT+GGG | 0.442037 | 6_4:-15380729 | None:intergenic |
| AAAAGACGCCGAACCATAAG+AGG | 0.442693 | 6_4:-15379436 | None:intergenic |
| TGGTGTTGGAGATGGACCTT+GGG | 0.447860 | 6_4:+15378961 | Msa0979050:CDS |
| GCAATAGAGCTTAATCTACT+TGG | 0.451020 | 6_4:+15379258 | Msa0979050:CDS |
| TAGGAATTGGAATTCGGATT+GGG | 0.451380 | 6_4:+15376969 | Msa0979050:five_prime_UTR |
| TCTTTAGTTTGTGAATTTCA+CGG | 0.452739 | 6_4:+15379146 | Msa0979050:intron |
| CCGGACCCTCATTCGGGTTA+CGG | 0.455689 | 6_4:+15377144 | Msa0979050:CDS |
| GTTGGGAGGGCGACTCTAGT+TGG | 0.462329 | 6_4:-15379411 | None:intergenic |
| ACCTGTCCACTCGTTGCTCT+TGG | 0.464264 | 6_4:-15377757 | None:intergenic |
| TTCAAACGTGTCCCATCTGC+AGG | 0.464621 | 6_4:+15380520 | Msa0979050:CDS |
| TTATCACCAAAACATGGTAT+TGG | 0.464748 | 6_4:-15378389 | None:intergenic |
| ATGGATATTGCCTGTTCATA+GGG | 0.464896 | 6_4:-15377930 | None:intergenic |
| TTGGTGTTGGAGATGGACCT+TGG | 0.465147 | 6_4:+15378960 | Msa0979050:CDS |
| CATTCCTCCTTCACGAAAAG+AGG | 0.466144 | 6_4:+15379185 | Msa0979050:CDS |
| ATTGCCTGTTCATAGGGATT+CGG | 0.466672 | 6_4:-15377924 | None:intergenic |
| ACGATCAGAGAAAGTTAGAT+AGG | 0.468557 | 6_4:+15377322 | Msa0979050:CDS |
| TCGATCATATTGGTTGGTGT+TGG | 0.471572 | 6_4:+15378947 | Msa0979050:CDS |
| CCCAACACCCTCTTATGGTT+CGG | 0.473927 | 6_4:+15379428 | Msa0979050:CDS |
| CCGAACCATAAGAGGGTGTT+GGG | 0.476496 | 6_4:-15379428 | None:intergenic |
| ACAATGGGTGCAAAGGATGT+AGG | 0.479320 | 6_4:-15378330 | None:intergenic |
| CCTCATTCGGGTTACGGTCA+GGG | 0.480031 | 6_4:+15377150 | Msa0979050:CDS |
| GGTTTGATTTGTATTAATTG+TGG | 0.480765 | 6_4:+15380811 | Msa0979050:three_prime_UTR |
| GGCACTCTGCCACTAGTTTG+AGG | 0.484672 | 6_4:-15377291 | None:intergenic |
| CTTTCTCTGATCGTCATGAC+GGG | 0.486062 | 6_4:-15377313 | None:intergenic |
| TGGTTTGACAGCTTAGCTTA+GGG | 0.486436 | 6_4:+15380756 | Msa0979050:three_prime_UTR |
| TTAGGAATTGGAATTCGGAT+TGG | 0.490480 | 6_4:+15376968 | Msa0979050:five_prime_UTR |
| TCATAATATGGTTGATAAGA+AGG | 0.493839 | 6_4:-15377228 | None:intergenic |
| TGGTCCGAATCCCTATGAAC+AGG | 0.495929 | 6_4:+15377920 | Msa0979050:CDS |
| ACTGAAGCTCTTGCACGTGC+AGG | 0.500884 | 6_4:+15377696 | Msa0979050:CDS |
| GGTGATAATTGCAGATGGCC+AGG | 0.501144 | 6_4:+15378404 | Msa0979050:CDS |
| CCGTAACCCGAATGAGGGTC+CGG | 0.501311 | 6_4:-15377144 | None:intergenic |
| CAACTTGTTTGACGACGTCT+TGG | 0.503494 | 6_4:-15379557 | None:intergenic |
| ACAGAAGATGCCGAACCATA+AGG | 0.504642 | 6_4:-15379471 | None:intergenic |
| CAATGGGTGCAAAGGATGTA+GGG | 0.505612 | 6_4:-15378329 | None:intergenic |
| TTTGCGGAGGAGGAGGAGGT+CGG | 0.506457 | 6_4:-15377254 | None:intergenic |
| TGGATGCCATTGTCGAGGCC+AGG | 0.508765 | 6_4:+15378834 | Msa0979050:CDS |
| CCAACCAATATGATCGAAAG+AGG | 0.511733 | 6_4:-15378941 | None:intergenic |
| TGGTACGAAGGTGGGTAAGA+AGG | 0.512902 | 6_4:-15379537 | None:intergenic |
| ACATGGGAGGCTCAGTCCAC+AGG | 0.514845 | 6_4:+15378799 | Msa0979050:CDS |
| AGATGAATGACAATGGATGT+TGG | 0.516119 | 6_4:-15375948 | None:intergenic |
| AAATTATCGAAGGCCCTAGC+TGG | 0.518132 | 6_4:-15379013 | None:intergenic |
| TTTGGATCAAGGAGATAAGT+GGG | 0.520534 | 6_4:+15376942 | Msa0979050:five_prime_UTR |
| GACGTCGTCAAACAAGTTGT+TGG | 0.522388 | 6_4:+15379561 | Msa0979050:CDS |
| CCTCTTTCGATCATATTGGT+TGG | 0.522830 | 6_4:+15378941 | Msa0979050:CDS |
| TCCACGGTCTTCTGCTCCTG+TGG | 0.524421 | 6_4:-15378815 | None:intergenic |
| ACTTTCTCTGATCGTCATGA+CGG | 0.526481 | 6_4:-15377314 | None:intergenic |
| ATATTGGTTGGTGTTGGAGA+TGG | 0.526977 | 6_4:+15378953 | Msa0979050:CDS |
| ACCAAGAGCAACGAGTGGAC+AGG | 0.529829 | 6_4:+15377756 | Msa0979050:CDS |
| AGAGAATTGAGTTGATTGAT+GGG | 0.532205 | 6_4:+15377030 | Msa0979050:exon |
| GGCCTCGACAATGGCATCCA+CGG | 0.533160 | 6_4:-15378831 | None:intergenic |
| CCAAAGAGGATAATAATTTG+AGG | 0.533593 | 6_4:+15377064 | Msa0979050:CDS |
| AGAGGATAATAATTTGAGGC+GGG | 0.534520 | 6_4:+15377068 | Msa0979050:CDS |
| TTGATGACAATATGCCAGCT+AGG | 0.536974 | 6_4:+15378999 | Msa0979050:CDS |
| TGTCATGGCCATTTCAACAA+TGG | 0.538180 | 6_4:-15378346 | None:intergenic |
| CCCTGACCGTAACCCGAATG+AGG | 0.541654 | 6_4:-15377150 | None:intergenic |
| TAAGTAGAACTTGGGGCAGA+AGG | 0.541739 | 6_4:-15379591 | None:intergenic |
| AGCTTGCATCACATCGGGAA+TGG | 0.543450 | 6_4:+15377900 | Msa0979050:CDS |
| ATCCATTATTGGGAAAACCT+TGG | 0.543835 | 6_4:+15377947 | Msa0979050:CDS |
| GGCGACTCTAGTTGGAGCAT+TGG | 0.544251 | 6_4:-15379403 | None:intergenic |
| AGAAGTATTGACACTGAACA+TGG | 0.549006 | 6_4:+15378782 | Msa0979050:CDS |
| CATTTCAACAATGGGTGCAA+AGG | 0.552326 | 6_4:-15378337 | None:intergenic |
| TGGACCTTGGGACATGATGA+AGG | 0.552430 | 6_4:+15378973 | Msa0979050:CDS |
| GCCGAACCATAAGAGGGTGT+TGG | 0.555869 | 6_4:-15379429 | None:intergenic |
| GAGAATTGAGTTGATTGATG+GGG | 0.556882 | 6_4:+15377031 | Msa0979050:exon |
| ATCCTCATCAAATGCAGCCA+AGG | 0.564689 | 6_4:-15377964 | None:intergenic |
| CAATAGAGCTTAATCTACTT+GGG | 0.567533 | 6_4:+15379259 | Msa0979050:CDS |
| GTGGAAGAAAGAGAGATAAG+TGG | 0.575508 | 6_4:-15375888 | None:intergenic |
| ACCATAAGAGGGTGTTGGGA+GGG | 0.576369 | 6_4:-15379424 | None:intergenic |
| GAGCAGCATCTTCTATTGGA+AGG | 0.576411 | 6_4:+15380574 | Msa0979050:exon |
| TTATCACCTGGCCTCGACAA+TGG | 0.576692 | 6_4:-15378840 | None:intergenic |
| ATTGCAGCCTTATACTGAGA+AGG | 0.585676 | 6_4:-15379240 | None:intergenic |
| TTTGACAGCTTAGCTTAGGG+TGG | 0.586490 | 6_4:+15380759 | Msa0979050:three_prime_UTR |
| AACCTTGGCTGCATTTGATG+AGG | 0.588955 | 6_4:+15377962 | Msa0979050:CDS |
| TTGGATCAAGGAGATAAGTG+GGG | 0.590776 | 6_4:+15376943 | Msa0979050:five_prime_UTR |
| GAATAAGATTGGAAGACTCA+AGG | 0.592639 | 6_4:-15377719 | None:intergenic |
| CGACGTCTTGGTACGAAGGT+GGG | 0.594009 | 6_4:-15379545 | None:intergenic |
| TGATGACAATATGCCAGCTA+GGG | 0.594660 | 6_4:+15379000 | Msa0979050:CDS |
| AACTCCTTCATCATGTCCCA+AGG | 0.595718 | 6_4:-15378977 | None:intergenic |
| AGAATTGAGTTGATTGATGG+GGG | 0.596183 | 6_4:+15377032 | Msa0979050:exon |
| AACCATAAGAGGGTGTTGGG+AGG | 0.605542 | 6_4:-15379425 | None:intergenic |
| CCTGACCGTAACCCGAATGA+GGG | 0.607945 | 6_4:-15377149 | None:intergenic |
| TTGACGACGTCTTGGTACGA+AGG | 0.611236 | 6_4:-15379549 | None:intergenic |
| GTTTACCTGAAAATTATCGA+AGG | 0.611679 | 6_4:-15379023 | None:intergenic |
| AATCTTAAACAGTAGTCGGA+AGG | 0.612928 | 6_4:+15379380 | Msa0979050:intron |
| TGACAGACATGTTGCGAATG+CGG | 0.613284 | 6_4:+15380489 | Msa0979050:intron |
| GGATATGAGCCTCAAACTAG+TGG | 0.613808 | 6_4:+15377282 | Msa0979050:CDS |
| TTAATGGGGCTCCTGCAGAT+GGG | 0.618309 | 6_4:-15380531 | None:intergenic |
| GACCGTGGATGCCATTGTCG+AGG | 0.620761 | 6_4:+15378829 | Msa0979050:CDS |
| CCATCCCCGAATCCAAAACA+AGG | 0.621252 | 6_4:-15377996 | None:intergenic |
| AAGAGGATAATAATTTGAGG+CGG | 0.623971 | 6_4:+15377067 | Msa0979050:CDS |
| TCAAAACTAGCAGCATGAGA+AGG | 0.631711 | 6_4:-15379504 | None:intergenic |
| CTGCAATTATCACCAAAACA+TGG | 0.636469 | 6_4:-15378395 | None:intergenic |
| TTTGTTTCTACAGTGAAACA+TGG | 0.636736 | 6_4:+15380658 | Msa0979050:three_prime_UTR |
| GTTGGAATATACTGGAATCG+TGG | 0.637989 | 6_4:-15375930 | None:intergenic |
| GTCAGAAACCAAAATGAATG+GGG | 0.643911 | 6_4:-15380728 | None:intergenic |
| ACTCTGCTCAACGATTGTCA+TGG | 0.648042 | 6_4:-15378361 | None:intergenic |
| GGTTGTTGTGACTCGTGCGT+AGG | 0.650682 | 6_4:-15377207 | None:intergenic |
| TGTGAATTTCGAATACAAGA+CGG | 0.655197 | 6_4:+15380842 | Msa0979050:three_prime_UTR |
| ACAATCGTTGAGCAGAGTGG+AGG | 0.656204 | 6_4:+15378366 | Msa0979050:CDS |
| ATGACAATCGTTGAGCAGAG+TGG | 0.657140 | 6_4:+15378363 | Msa0979050:CDS |
| AGTTAGATAGGAAATACTCA+AGG | 0.660548 | 6_4:+15377334 | Msa0979050:CDS |
| TGTGAATCATAAGTATAAGG+AGG | 0.665030 | 6_4:-15377180 | None:intergenic |
| AAAGTGAAGATACCTGATTG+TGG | 0.672441 | 6_4:-15375972 | None:intergenic |
| GAATTGAGTTGATTGATGGG+GGG | 0.672957 | 6_4:+15377033 | Msa0979050:exon |
| AAAGACGCCGAACCATAAGA+GGG | 0.674020 | 6_4:-15379435 | None:intergenic |
| TTGTGGAAGATGAATGACAA+TGG | 0.677166 | 6_4:-15375955 | None:intergenic |
| ATTTCACCAAGAGCAACGAG+TGG | 0.683170 | 6_4:+15377751 | Msa0979050:CDS |
| TCCACAGGAGCAGAAGACCG+TGG | 0.684259 | 6_4:+15378814 | Msa0979050:CDS |
| GAAGTATTGACACTGAACAT+GGG | 0.689699 | 6_4:+15378783 | Msa0979050:CDS |
| GTATTGACACTGAACATGGG+AGG | 0.694374 | 6_4:+15378786 | Msa0979050:CDS |
| TTTCTCTGATCGTCATGACG+GGG | 0.719608 | 6_4:-15377312 | None:intergenic |
| CATTCGGGTTACGGTCAGGG+CGG | 0.722179 | 6_4:+15377153 | Msa0979050:CDS |
| TAATTACAACTCCATAGACG+AGG | 0.735332 | 6_4:+15377365 | Msa0979050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTATATGTTTAATATA+GGG | + | chr6_4:15379994-15380013 | Msa0979050:intron | 10.0% |
| !! | AAAAACAAGATTACTAAAAA+TGG | - | chr6_4:15376178-15376197 | None:intergenic | 15.0% |
| !! | CATTTGTTTGATATATTTAA+AGG | + | chr6_4:15376470-15376489 | Msa0979050:intron | 15.0% |
| !! | AGATAAAAACTATACAAAAT+CGG | - | chr6_4:15377409-15377428 | None:intergenic | 15.0% |
| !!! | TTATTCATCTTTTTTCTTTT+GGG | + | chr6_4:15377595-15377614 | Msa0979050:intron | 15.0% |
| !! | AAACTATAAATGTATAGATA+TGG | - | chr6_4:15377787-15377806 | None:intergenic | 15.0% |
| !! | ACTTGTATTTATAATTACAA+TGG | + | chr6_4:15378596-15378615 | Msa0979050:intron | 15.0% |
| !!! | GTTAAAATGTTCTAAAATTT+TGG | + | chr6_4:15379084-15379103 | Msa0979050:intron | 15.0% |
| !! | CTTTCAGATATATATTAAAT+AGG | - | chr6_4:15379897-15379916 | None:intergenic | 15.0% |
| !! | CTATTTAATATATATCTGAA+AGG | + | chr6_4:15379895-15379914 | Msa0979050:intron | 15.0% |
| !!! | ATTTGCATAATTTTATTGTT+CGG | + | chr6_4:15379959-15379978 | Msa0979050:intron | 15.0% |
| !!! | GCATTTTATATGTTTAATAT+AGG | + | chr6_4:15379993-15380012 | Msa0979050:intron | 15.0% |
| !! | AATAGAGTATATAACTAAAT+TGG | - | chr6_4:15380401-15380420 | None:intergenic | 15.0% |
| !! | TATATGGTTGTATAAAATAT+TGG | + | chr6_4:15380627-15380646 | Msa0979050:three_prime_UTR | 15.0% |
| !! | TTTGTGTTTATCAATTAACA+CGG | - | chr6_4:15376096-15376115 | None:intergenic | 20.0% |
| !!! | TGGAAATTGAATTGTTATTT+TGG | + | chr6_4:15376136-15376155 | Msa0979050:intron | 20.0% |
| !!! | GGAAATTGAATTGTTATTTT+GGG | + | chr6_4:15376137-15376156 | Msa0979050:intron | 20.0% |
| !!! | TAGAAATTGAATTGCTATTT+AGG | + | chr6_4:15376262-15376281 | Msa0979050:intron | 20.0% |
| !!! | AGAAATTGAATTGCTATTTA+GGG | + | chr6_4:15376263-15376282 | Msa0979050:intron | 20.0% |
| !!! | TTTGAAAGTTTGTTTTTTTG+CGG | + | chr6_4:15376405-15376424 | Msa0979050:intron | 20.0% |
| !!! | TTTGAGTTTAATTTGATTGT+TGG | + | chr6_4:15376646-15376665 | Msa0979050:intron | 20.0% |
| !!! | TTGAGTTTAATTTGATTGTT+GGG | + | chr6_4:15376647-15376666 | Msa0979050:intron | 20.0% |
| !!! | TATTGTGGTAAATTTTGTTA+AGG | + | chr6_4:15376780-15376799 | Msa0979050:intron | 20.0% |
| !!! | TTTGAATTCAATTTTGTAGT+TGG | + | chr6_4:15376881-15376900 | Msa0979050:intron | 20.0% |
| !!! | TTGAATTCAATTTTGTAGTT+GGG | + | chr6_4:15376882-15376901 | Msa0979050:intron | 20.0% |
| !!! | GTATTGATATTTATGTGATT+TGG | + | chr6_4:15377507-15377526 | Msa0979050:intron | 20.0% |
| !!! | CTTATTCATCTTTTTTCTTT+TGG | + | chr6_4:15377594-15377613 | Msa0979050:intron | 20.0% |
| !! | TTATACTTATATCTCATTAC+AGG | + | chr6_4:15377671-15377690 | Msa0979050:intron | 20.0% |
| !!! | TATTGTAGAATTTTTGTTTG+TGG | + | chr6_4:15378048-15378067 | Msa0979050:intron | 20.0% |
| !! | ATGAATAGAAAGATAAATGA+AGG | - | chr6_4:15378506-15378525 | None:intergenic | 20.0% |
| !! | TTATCTTTCTATTCATTCAA+AGG | + | chr6_4:15378510-15378529 | Msa0979050:intron | 20.0% |
| !! | AAAAGAGATAATAATACTGA+AGG | - | chr6_4:15379303-15379322 | None:intergenic | 20.0% |
| !! | TATTAATCTTAAACAGTAGT+CGG | + | chr6_4:15379376-15379395 | Msa0979050:intron | 20.0% |
| !! | ATTAAACATATAAAATGCAC+CGG | - | chr6_4:15379991-15380010 | None:intergenic | 20.0% |
| !!! | AATTTGTTAATTTTGCTGTA+AGG | - | chr6_4:15380067-15380086 | None:intergenic | 20.0% |
| !!! | CAGTTTTAATTGATTCAATT+TGG | + | chr6_4:15380790-15380809 | Msa0979050:three_prime_UTR | 20.0% |
| ! | GGTCAATTATGATCTTAATA+AGG | - | chr6_4:15376038-15376057 | None:intergenic | 25.0% |
| !!! | AATTGCTATTTAGGGTTAAT+TGG | + | chr6_4:15376271-15376290 | Msa0979050:intron | 25.0% |
| !!! | ATTGCTATTTAGGGTTAATT+GGG | + | chr6_4:15376272-15376291 | Msa0979050:intron | 25.0% |
| !! | AACGAGATTTTGTACATTTT+TGG | + | chr6_4:15376343-15376362 | Msa0979050:intron | 25.0% |
| !!! | TTTTGTACATTTTTGGCTTT+TGG | + | chr6_4:15376350-15376369 | Msa0979050:intron | 25.0% |
| !! | TTTTGCATTCAAACTTTACT+TGG | + | chr6_4:15376438-15376457 | Msa0979050:intron | 25.0% |
| !! | TCATAAATTCAGAATTTGCT+TGG | + | chr6_4:15376553-15376572 | Msa0979050:intron | 25.0% |
| !!! | TTGGGTTTTTGATTTTGAAT+TGG | + | chr6_4:15376665-15376684 | Msa0979050:intron | 25.0% |
| !!! | TTGATTTTGAATTGGTTTTG+TGG | + | chr6_4:15376673-15376692 | Msa0979050:intron | 25.0% |
| !!! | TTTTGTGGTGAATTTTGTTT+AGG | + | chr6_4:15376688-15376707 | Msa0979050:intron | 25.0% |
| !! | ATAAGTGAGGTATTAGAAAT+TGG | + | chr6_4:15376713-15376732 | Msa0979050:intron | 25.0% |
| !! | TTTGAGTTCAATTTCATTGT+TGG | + | chr6_4:15376738-15376757 | Msa0979050:intron | 25.0% |
| ! | TTGAGTTCAATTTCATTGTT+GGG | + | chr6_4:15376739-15376758 | Msa0979050:intron | 25.0% |
| !! | TTAAGATCTAGAATTTGGAT+TGG | + | chr6_4:15376817-15376836 | Msa0979050:intron | 25.0% |
| ! | TTGTTGTAATTGTTGTGATT+TGG | + | chr6_4:15376999-15377018 | Msa0979050:five_prime_UTR | 25.0% |
| ! | TGTTGTGAATCATAAGTATA+AGG | - | chr6_4:15377186-15377205 | None:intergenic | 25.0% |
| !!! | TCATAATATGGTTGATAAGA+AGG | - | chr6_4:15377231-15377250 | None:intergenic | 25.0% |
| ! | ATCAATTCCAAGAATAAGAT+TGG | - | chr6_4:15377733-15377752 | None:intergenic | 25.0% |
| !!! | AATACTTATGTTTTAACGTC+AGG | + | chr6_4:15378306-15378325 | Msa0979050:intron | 25.0% |
| ! | CATTCAAAGGATTAAGTAAT+TGG | + | chr6_4:15378523-15378542 | Msa0979050:intron | 25.0% |
| ! | TATTGTTTAGGAATATTGAC+AGG | + | chr6_4:15378711-15378730 | Msa0979050:intron | 25.0% |
| ! | CTTAATTCTAACAATGTAGA+TGG | + | chr6_4:15378738-15378757 | Msa0979050:intron | 25.0% |
| ! | ATTCATCATCTGAATTATTG+TGG | + | chr6_4:15379108-15379127 | Msa0979050:intron | 25.0% |
| !!! | TCTTTAGTTTGTGAATTTCA+CGG | + | chr6_4:15379146-15379165 | Msa0979050:intron | 25.0% |
| !! | ATTTTCATAAGTAGAACTTG+GGG | - | chr6_4:15379601-15379620 | None:intergenic | 25.0% |
| !! | GATTTTCATAAGTAGAACTT+GGG | - | chr6_4:15379602-15379621 | None:intergenic | 25.0% |
| !! | TGATTTTCATAAGTAGAACT+TGG | - | chr6_4:15379603-15379622 | None:intergenic | 25.0% |
| ! | AAGTTCTACTTATGAAAATC+AGG | + | chr6_4:15379602-15379621 | Msa0979050:CDS | 25.0% |
| ! | TTTCATTGGTCAAACATATA+GGG | - | chr6_4:15380112-15380131 | None:intergenic | 25.0% |
| !! | TTTTCATTGGTCAAACATAT+AGG | - | chr6_4:15380113-15380132 | None:intergenic | 25.0% |
| ! | TTTGACCAATGAAAAAGATA+TGG | + | chr6_4:15380118-15380137 | Msa0979050:intron | 25.0% |
| !!! | AATAGGTCTGTGTTTTTTTA+GGG | - | chr6_4:15380204-15380223 | None:intergenic | 25.0% |
| !!! | TCTGTATTTTTTATTGCTCA+TGG | - | chr6_4:15380230-15380249 | None:intergenic | 25.0% |
| ! | AGCAATAAAAAATACAGATC+TGG | + | chr6_4:15380232-15380251 | Msa0979050:intron | 25.0% |
| !!! | GATCTGGTTTATAAGTATTT+TGG | + | chr6_4:15380248-15380267 | Msa0979050:intron | 25.0% |
| !!! | AAATAACACCAAGACTTTTT+TGG | - | chr6_4:15380365-15380384 | None:intergenic | 25.0% |
| !!! | TTGGTGTTATTTATTTAGCA+TGG | + | chr6_4:15380373-15380392 | Msa0979050:intron | 25.0% |
| !!! | TGGTGTTATTTATTTAGCAT+GGG | + | chr6_4:15380374-15380393 | Msa0979050:intron | 25.0% |
| ! | ATTGTTTACCTCAGAAATAT+GGG | - | chr6_4:15380435-15380454 | None:intergenic | 25.0% |
| ! | TATTGTTTACCTCAGAAATA+TGG | - | chr6_4:15380436-15380455 | None:intergenic | 25.0% |
| !!! | AGTTTTATTCTGGTGTTAAT+GGG | - | chr6_4:15380549-15380568 | None:intergenic | 25.0% |
| !!! | AAGTTTTATTCTGGTGTTAA+TGG | - | chr6_4:15380550-15380569 | None:intergenic | 25.0% |
| !!! | ATTTTGGTTTCTGACAATAT+TGG | + | chr6_4:15380736-15380755 | Msa0979050:three_prime_UTR | 25.0% |
| !!! | GGTTTGATTTGTATTAATTG+TGG | + | chr6_4:15380811-15380830 | Msa0979050:three_prime_UTR | 25.0% |
| AAGCAAGATTGCTAAAAATG+TGG | - | chr6_4:15376059-15376078 | None:intergenic | 30.0% | |
| TGTTTATCAATTAACACGGT+TGG | - | chr6_4:15376092-15376111 | None:intergenic | 30.0% | |
| CATTCAAACTTTACTTGGTA+GGG | + | chr6_4:15376443-15376462 | Msa0979050:intron | 30.0% | |
| ! | TAAAGTTTGCTTCTTTGAGT+CGG | + | chr6_4:15376502-15376521 | Msa0979050:intron | 30.0% |
| CTTTATCCATTTATAGTGTG+TGG | + | chr6_4:15376615-15376634 | Msa0979050:intron | 30.0% | |
| !! | TTTTGTTTAGGAGATAAGTG+AGG | + | chr6_4:15376700-15376719 | Msa0979050:intron | 30.0% |
| ! | TTGGGTTTCTGATTTTGAAT+TGG | + | chr6_4:15376757-15376776 | Msa0979050:intron | 30.0% |
| ! | CTGATTTTGAATTGGTATTG+TGG | + | chr6_4:15376765-15376784 | Msa0979050:intron | 30.0% |
| ! | TTTTGTTAAGGAGATAAGTG+AGG | + | chr6_4:15376792-15376811 | Msa0979050:intron | 30.0% |
| ! | AGGTGTTAAGATCTAGAATT+TGG | + | chr6_4:15376812-15376831 | Msa0979050:intron | 30.0% |
| ! | CTAGTTATAGTGTCTGAAAT+TGG | + | chr6_4:15376856-15376875 | Msa0979050:intron | 30.0% |
| !! | AGAGAATTGAGTTGATTGAT+GGG | + | chr6_4:15377030-15377049 | Msa0979050:exon | 30.0% |
| CCTCAAATTATTATCCTCTT+TGG | - | chr6_4:15377067-15377086 | None:intergenic | 30.0% | |
| CCAAAGAGGATAATAATTTG+AGG | + | chr6_4:15377064-15377083 | Msa0979050:CDS | 30.0% | |
| AAGAGGATAATAATTTGAGG+CGG | + | chr6_4:15377067-15377086 | Msa0979050:CDS | 30.0% | |
| TTCTTCTTGGAATTCATATC+CGG | + | chr6_4:15377125-15377144 | Msa0979050:CDS | 30.0% | |
| TGTGAATCATAAGTATAAGG+AGG | - | chr6_4:15377183-15377202 | None:intergenic | 30.0% | |
| AGTTAGATAGGAAATACTCA+AGG | + | chr6_4:15377334-15377353 | Msa0979050:CDS | 30.0% | |
| !! | TGTAGAGCTTTAAATTCATC+AGG | - | chr6_4:15377474-15377493 | None:intergenic | 30.0% |
| ! | GATATTTATGTGATTTGGCA+TGG | + | chr6_4:15377512-15377531 | Msa0979050:intron | 30.0% |
| AGATGAATAAGTAGCATTGT+CGG | - | chr6_4:15377585-15377604 | None:intergenic | 30.0% | |
| AACAGGCAATATCCATTATT+GGG | + | chr6_4:15377937-15377956 | Msa0979050:CDS | 30.0% | |
| !! | GATAACTTGATTCCTTGTTT+TGG | + | chr6_4:15377984-15378003 | Msa0979050:CDS | 30.0% |
| !!! | TTGATTCCTTGTTTTGGATT+CGG | + | chr6_4:15377990-15378009 | Msa0979050:CDS | 30.0% |
| ! | TGTGGTTTAAAATGTGCTAA+TGG | + | chr6_4:15378066-15378085 | Msa0979050:intron | 30.0% |
| ! | GTGGTTTAAAATGTGCTAAT+GGG | + | chr6_4:15378067-15378086 | Msa0979050:intron | 30.0% |
| !!! | GATTTGAAGAAGTTTTGAGT+CGG | + | chr6_4:15378169-15378188 | Msa0979050:CDS | 30.0% |
| GTTCCTAATATTAAACTTGC+AGG | + | chr6_4:15378204-15378223 | Msa0979050:CDS | 30.0% | |
| AGACCTGCAAGTTTAATATT+AGG | - | chr6_4:15378210-15378229 | None:intergenic | 30.0% | |
| TTATCACCAAAACATGGTAT+TGG | - | chr6_4:15378392-15378411 | None:intergenic | 30.0% | |
| AAGATAACCCTAAACATACT+GGG | - | chr6_4:15378444-15378463 | None:intergenic | 30.0% | |
| AAAGATAACCCTAAACATAC+TGG | - | chr6_4:15378445-15378464 | None:intergenic | 30.0% | |
| TAGGTTAGTGCTAATCAATT+GGG | - | chr6_4:15378645-15378664 | None:intergenic | 30.0% | |
| GGAATATTAGCAAGTAATGA+AGG | + | chr6_4:15378682-15378701 | Msa0979050:intron | 30.0% | |
| TGAAGGAAGTTGTATTGTTT+AGG | + | chr6_4:15378699-15378718 | Msa0979050:intron | 30.0% | |
| AGACAAGATGTTCGTAAAAA+CGG | - | chr6_4:15378893-15378912 | None:intergenic | 30.0% | |
| ATTTCCTCTTTCGATCATAT+TGG | + | chr6_4:15378937-15378956 | Msa0979050:CDS | 30.0% | |
| GTTTACCTGAAAATTATCGA+AGG | - | chr6_4:15379026-15379045 | None:intergenic | 30.0% | |
| CAATAGAGCTTAATCTACTT+GGG | + | chr6_4:15379259-15379278 | Msa0979050:CDS | 30.0% | |
| TTTGGTACTTCAAAACCTTA+TGG | + | chr6_4:15379456-15379475 | Msa0979050:CDS | 30.0% | |
| TACTTCAAAACCTTATGGTT+CGG | + | chr6_4:15379461-15379480 | Msa0979050:CDS | 30.0% | |
| GTAATCTAATTAGTCAACTG+AGG | - | chr6_4:15379780-15379799 | None:intergenic | 30.0% | |
| !! | CATTATGCTGCATAGTTTTA+TGG | + | chr6_4:15379862-15379881 | Msa0979050:intron | 30.0% |
| ATTATGCAAATAATACAGCC+TGG | - | chr6_4:15379950-15379969 | None:intergenic | 30.0% | |
| TATAGGGATTGAGTATGAAA+TGG | + | chr6_4:15380010-15380029 | Msa0979050:intron | 30.0% | |
| AATGAAAAAGATATGGCCTT+CGG | + | chr6_4:15380125-15380144 | Msa0979050:intron | 30.0% | |
| !!! | ATAGGTCTGTGTTTTTTTAG+GGG | - | chr6_4:15380203-15380222 | None:intergenic | 30.0% |
| !!! | CAATAGGTCTGTGTTTTTTT+AGG | - | chr6_4:15380205-15380224 | None:intergenic | 30.0% |
| CTAAAAAAACACAGACCTAT+TGG | + | chr6_4:15380203-15380222 | Msa0979050:intron | 30.0% | |
| ! | ATTCACATCTGAGATTCTTA+AGG | + | chr6_4:15380307-15380326 | Msa0979050:intron | 30.0% |
| ! | AATTTCTTCCCATATTTCTG+AGG | + | chr6_4:15380424-15380443 | Msa0979050:intron | 30.0% |
| !! | TTCTGAGGTAAACAATAGAT+TGG | + | chr6_4:15380439-15380458 | Msa0979050:intron | 30.0% |
| ! | TCTGAGGTAAACAATAGATT+GGG | + | chr6_4:15380440-15380459 | Msa0979050:intron | 30.0% |
| !! | GTTTTATTCTGGTGTTAATG+GGG | - | chr6_4:15380548-15380567 | None:intergenic | 30.0% |
| !!! | TGCTCAGTAAAGTTTTATTC+TGG | - | chr6_4:15380559-15380578 | None:intergenic | 30.0% |
| !! | TTTGTTTCTACAGTGAAACA+TGG | + | chr6_4:15380658-15380677 | Msa0979050:three_prime_UTR | 30.0% |
| !!! | TTTTTTTGCCCCATTCATTT+TGG | + | chr6_4:15380720-15380739 | Msa0979050:three_prime_UTR | 30.0% |
| TGTCAGAAACCAAAATGAAT+GGG | - | chr6_4:15380732-15380751 | None:intergenic | 30.0% | |
| TTGTCAGAAACCAAAATGAA+TGG | - | chr6_4:15380733-15380752 | None:intergenic | 30.0% | |
| TGTGAATTTCGAATACAAGA+CGG | + | chr6_4:15380842-15380861 | Msa0979050:three_prime_UTR | 30.0% | |
| TTGAAAACGTGAAAAGTTGC+TGG | - | chr6_4:15375864-15375883 | None:intergenic | 35.0% | |
| CAATGGATGTTGGAATATAC+TGG | - | chr6_4:15375941-15375960 | None:intergenic | 35.0% | |
| AGATGAATGACAATGGATGT+TGG | - | chr6_4:15375951-15375970 | None:intergenic | 35.0% | |
| TTGTGGAAGATGAATGACAA+TGG | - | chr6_4:15375958-15375977 | None:intergenic | 35.0% | |
| AAAGTGAAGATACCTGATTG+TGG | - | chr6_4:15375975-15375994 | None:intergenic | 35.0% | |
| TCCATCATTGAGTAATTCAG+TGG | + | chr6_4:15376116-15376135 | Msa0979050:intron | 35.0% | |
| TCCACTGAATTACTCAATGA+TGG | - | chr6_4:15376120-15376139 | None:intergenic | 35.0% | |
| ! | GGCTTTTGGATACCTAATAA+AGG | + | chr6_4:15376364-15376383 | Msa0979050:intron | 35.0% |
| CAACACACGTAACCTTTATT+AGG | - | chr6_4:15376379-15376398 | None:intergenic | 35.0% | |
| GCATTCAAACTTTACTTGGT+AGG | + | chr6_4:15376442-15376461 | Msa0979050:intron | 35.0% | |
| ! | TTCAGAATTTGCTTGGAAAC+TGG | + | chr6_4:15376560-15376579 | Msa0979050:intron | 35.0% |
| ! | TCAGAATTTGCTTGGAAACT+GGG | + | chr6_4:15376561-15376580 | Msa0979050:intron | 35.0% |
| CCAATTCCACACACTATAAA+TGG | - | chr6_4:15376624-15376643 | None:intergenic | 35.0% | |
| CCATTTATAGTGTGTGGAAT+TGG | + | chr6_4:15376621-15376640 | Msa0979050:intron | 35.0% | |
| !!! | TGTAGTTGGGTTTTTGAGTT+TGG | + | chr6_4:15376895-15376914 | Msa0979050:intron | 35.0% |
| !!! | TTGGGTTTTTGAGTTTGGAT+TGG | + | chr6_4:15376900-15376919 | Msa0979050:five_prime_UTR | 35.0% |
| !!! | TTGGATTGGTTTTCTCTTTC+TGG | + | chr6_4:15376914-15376933 | Msa0979050:five_prime_UTR | 35.0% |
| !!! | TTTCTCTTTCTGGTGGATTT+TGG | + | chr6_4:15376924-15376943 | Msa0979050:five_prime_UTR | 35.0% |
| ! | TTTTGGATCAAGGAGATAAG+TGG | + | chr6_4:15376941-15376960 | Msa0979050:five_prime_UTR | 35.0% |
| TTTGGATCAAGGAGATAAGT+GGG | + | chr6_4:15376942-15376961 | Msa0979050:five_prime_UTR | 35.0% | |
| TTAGGAATTGGAATTCGGAT+TGG | + | chr6_4:15376968-15376987 | Msa0979050:five_prime_UTR | 35.0% | |
| TAGGAATTGGAATTCGGATT+GGG | + | chr6_4:15376969-15376988 | Msa0979050:five_prime_UTR | 35.0% | |
| !! | CAGAGAATTGAGTTGATTGA+TGG | + | chr6_4:15377029-15377048 | Msa0979050:exon | 35.0% |
| !! | GAGAATTGAGTTGATTGATG+GGG | + | chr6_4:15377031-15377050 | Msa0979050:exon | 35.0% |
| !! | AGAATTGAGTTGATTGATGG+GGG | + | chr6_4:15377032-15377051 | Msa0979050:exon | 35.0% |
| ! | AGAGGATAATAATTTGAGGC+GGG | + | chr6_4:15377068-15377087 | Msa0979050:CDS | 35.0% |
| ACGATCAGAGAAAGTTAGAT+AGG | + | chr6_4:15377322-15377341 | Msa0979050:CDS | 35.0% | |
| TAATTACAACTCCATAGACG+AGG | + | chr6_4:15377365-15377384 | Msa0979050:CDS | 35.0% | |
| !!! | AGCATTTTTTACCTCGTCTA+TGG | - | chr6_4:15377379-15377398 | None:intergenic | 35.0% |
| GAAGAAAAAGATAGCAGCAT+GGG | - | chr6_4:15377452-15377471 | None:intergenic | 35.0% | |
| ! | AGACAACATCATTTTCAACC+AGG | - | chr6_4:15377538-15377557 | None:intergenic | 35.0% |
| GAATAAGATTGGAAGACTCA+AGG | - | chr6_4:15377722-15377741 | None:intergenic | 35.0% | |
| GAGTCTTCCAATCTTATTCT+TGG | + | chr6_4:15377723-15377742 | Msa0979050:CDS | 35.0% | |
| AGAAAAAGCTTGCATCACAT+CGG | + | chr6_4:15377894-15377913 | Msa0979050:CDS | 35.0% | |
| ATGGATATTGCCTGTTCATA+GGG | - | chr6_4:15377933-15377952 | None:intergenic | 35.0% | |
| AATGGATATTGCCTGTTCAT+AGG | - | chr6_4:15377934-15377953 | None:intergenic | 35.0% | |
| GAACAGGCAATATCCATTAT+TGG | + | chr6_4:15377936-15377955 | Msa0979050:CDS | 35.0% | |
| ATCCATTATTGGGAAAACCT+TGG | + | chr6_4:15377947-15377966 | Msa0979050:CDS | 35.0% | |
| !!! | TGATTCCTTGTTTTGGATTC+GGG | + | chr6_4:15377991-15378010 | Msa0979050:CDS | 35.0% |
| TTGATGCTGCCATAATATCA+CGG | - | chr6_4:15378098-15378117 | None:intergenic | 35.0% | |
| CCATTGCAAAATCTTTCATC+TGG | - | chr6_4:15378150-15378169 | None:intergenic | 35.0% | |
| ! | CCAGATGAAAGATTTTGCAA+TGG | + | chr6_4:15378147-15378166 | Msa0979050:CDS | 35.0% |
| !!! | AAGAAGTTTTGAGTCGGTAT+AGG | + | chr6_4:15378175-15378194 | Msa0979050:CDS | 35.0% |
| !!! | AGAAGTTTTGAGTCGGTATA+GGG | + | chr6_4:15378176-15378195 | Msa0979050:CDS | 35.0% |
| ATAAGAGCAACAAGACAAGT+AGG | - | chr6_4:15378239-15378258 | None:intergenic | 35.0% | |
| CTGCAATTATCACCAAAACA+TGG | - | chr6_4:15378398-15378417 | None:intergenic | 35.0% | |
| !! | GTTTTGGTGATAATTGCAGA+TGG | + | chr6_4:15378399-15378418 | Msa0979050:CDS | 35.0% |
| ATTCGTTACCCAGTATGTTT+AGG | + | chr6_4:15378433-15378452 | Msa0979050:intron | 35.0% | |
| TTCGTTACCCAGTATGTTTA+GGG | + | chr6_4:15378434-15378453 | Msa0979050:intron | 35.0% | |
| CTAGGTTAGTGCTAATCAAT+TGG | - | chr6_4:15378646-15378665 | None:intergenic | 35.0% | |
| CAATTGATTAGCACTAACCT+AGG | + | chr6_4:15378644-15378663 | Msa0979050:intron | 35.0% | |
| !! | ACAATGTAGATGGCTTTGTT+TGG | + | chr6_4:15378748-15378767 | Msa0979050:intron | 35.0% |
| !! | AGAAGTATTGACACTGAACA+TGG | + | chr6_4:15378782-15378801 | Msa0979050:CDS | 35.0% |
| !! | GAAGTATTGACACTGAACAT+GGG | + | chr6_4:15378783-15378802 | Msa0979050:CDS | 35.0% |
| GGAAATTCCTTCTCAGTATA+AGG | + | chr6_4:15379233-15379252 | Msa0979050:CDS | 35.0% | |
| GCAATAGAGCTTAATCTACT+TGG | + | chr6_4:15379258-15379277 | Msa0979050:CDS | 35.0% | |
| AATCTTAAACAGTAGTCGGA+AGG | + | chr6_4:15379380-15379399 | Msa0979050:intron | 35.0% | |
| !! | TTGCTTTTCCTTGTAGCTTT+TGG | + | chr6_4:15379739-15379758 | Msa0979050:intron | 35.0% |
| ! | TGCTTTTCCTTGTAGCTTTT+GGG | + | chr6_4:15379740-15379759 | Msa0979050:intron | 35.0% |
| AGACAGAGTATATGCTTTGT+TGG | - | chr6_4:15379807-15379826 | None:intergenic | 35.0% | |
| AGCATATACTCTGTCTAATG+TGG | + | chr6_4:15379811-15379830 | Msa0979050:intron | 35.0% | |
| AATAATACAGCCTGGATGAA+TGG | - | chr6_4:15379942-15379961 | None:intergenic | 35.0% | |
| ! | TTTTATTGTTCGGTTGCTTC+CGG | + | chr6_4:15379969-15379988 | Msa0979050:intron | 35.0% |
| !! | GAAGGCCATATCTTTTTCAT+TGG | - | chr6_4:15380126-15380145 | None:intergenic | 35.0% |
| TCAAGAGCAAATGTCCTAAT+TGG | + | chr6_4:15380176-15380195 | Msa0979050:intron | 35.0% | |
| !!! | GTTTTTTTAGGGGACCAATT+AGG | - | chr6_4:15380193-15380212 | None:intergenic | 35.0% |
| TTTATTGCTCATGGACCAAT+AGG | - | chr6_4:15380221-15380240 | None:intergenic | 35.0% | |
| GAATGGGGCAAAAAAAATCA+AGG | - | chr6_4:15380716-15380735 | None:intergenic | 35.0% | |
| GTCAGAAACCAAAATGAATG+GGG | - | chr6_4:15380731-15380750 | None:intergenic | 35.0% | |
| GTGGAAGAAAGAGAGATAAG+TGG | - | chr6_4:15375891-15375910 | None:intergenic | 40.0% | |
| !!! | TGGTTTTGAGTTGAAAAGCG+CGG | - | chr6_4:15375913-15375932 | None:intergenic | 40.0% |
| GTTGGAATATACTGGAATCG+TGG | - | chr6_4:15375933-15375952 | None:intergenic | 40.0% | |
| GTCATTCATCTTCCACAATC+AGG | + | chr6_4:15375960-15375979 | Msa0979050:five_prime_UTR | 40.0% | |
| !!! | GATTGGTTTTCTCTTTCTGG+TGG | + | chr6_4:15376917-15376936 | Msa0979050:five_prime_UTR | 40.0% |
| !!! | TTCTGGTGGATTTTGGATCA+AGG | + | chr6_4:15376931-15376950 | Msa0979050:five_prime_UTR | 40.0% |
| TTGGATCAAGGAGATAAGTG+GGG | + | chr6_4:15376943-15376962 | Msa0979050:five_prime_UTR | 40.0% | |
| ! | ATAAGTGGGGTGTTAGGAAT+TGG | + | chr6_4:15376956-15376975 | Msa0979050:five_prime_UTR | 40.0% |
| GGGTGTTAGGAATTGGAATT+CGG | + | chr6_4:15376963-15376982 | Msa0979050:five_prime_UTR | 40.0% | |
| !! | GAATTGAGTTGATTGATGGG+GGG | + | chr6_4:15377033-15377052 | Msa0979050:exon | 40.0% |
| !! | TCATATCCATAGTTTTGCGG+AGG | - | chr6_4:15377270-15377289 | None:intergenic | 40.0% |
| !! | GGCTCATATCCATAGTTTTG+CGG | - | chr6_4:15377273-15377292 | None:intergenic | 40.0% |
| ACTTTCTCTGATCGTCATGA+CGG | - | chr6_4:15377317-15377336 | None:intergenic | 40.0% | |
| GGAAGAAAAAGATAGCAGCA+TGG | - | chr6_4:15377453-15377472 | None:intergenic | 40.0% | |
| GAAAAAGCTTGCATCACATC+GGG | + | chr6_4:15377895-15377914 | Msa0979050:CDS | 40.0% | |
| ATTGCCTGTTCATAGGGATT+CGG | - | chr6_4:15377927-15377946 | None:intergenic | 40.0% | |
| ! | AGCCAAGGTTTTCCCAATAA+TGG | - | chr6_4:15377952-15377971 | None:intergenic | 40.0% |
| !!! | GATTCCTTGTTTTGGATTCG+GGG | + | chr6_4:15377992-15378011 | Msa0979050:CDS | 40.0% |
| TGGGCATTACCGTGATATTA+TGG | + | chr6_4:15378086-15378105 | Msa0979050:intron | 40.0% | |
| CATTTCAACAATGGGTGCAA+AGG | - | chr6_4:15378340-15378359 | None:intergenic | 40.0% | |
| CTTTGCACCCATTGTTGAAA+TGG | + | chr6_4:15378338-15378357 | Msa0979050:CDS | 40.0% | |
| GTCATGGCCATTTCAACAAT+GGG | - | chr6_4:15378348-15378367 | None:intergenic | 40.0% | |
| TGTCATGGCCATTTCAACAA+TGG | - | chr6_4:15378349-15378368 | None:intergenic | 40.0% | |
| TGGGTAACGAATAGAATACC+TGG | - | chr6_4:15378425-15378444 | None:intergenic | 40.0% | |
| TTGAGCAAATCAGAGAAGAC+TGG | + | chr6_4:15378463-15378482 | Msa0979050:intron | 40.0% | |
| ATGAAGGAGAAAGCAAGAAG+CGG | - | chr6_4:15378490-15378509 | None:intergenic | 40.0% | |
| CCTAGACTATACAGTTTCCT+AGG | - | chr6_4:15378664-15378683 | None:intergenic | 40.0% | |
| CCTAGGAAACTGTATAGTCT+AGG | + | chr6_4:15378661-15378680 | Msa0979050:intron | 40.0% | |
| AACTTTGCAGCATTATCACC+TGG | - | chr6_4:15378855-15378874 | None:intergenic | 40.0% | |
| CCAACCAATATGATCGAAAG+AGG | - | chr6_4:15378944-15378963 | None:intergenic | 40.0% | |
| CCTCTTTCGATCATATTGGT+TGG | + | chr6_4:15378941-15378960 | Msa0979050:CDS | 40.0% | |
| ! | TCGATCATATTGGTTGGTGT+TGG | + | chr6_4:15378947-15378966 | Msa0979050:CDS | 40.0% |
| !! | ATATTGGTTGGTGTTGGAGA+TGG | + | chr6_4:15378953-15378972 | Msa0979050:CDS | 40.0% |
| ! | TTGATGACAATATGCCAGCT+AGG | + | chr6_4:15378999-15379018 | Msa0979050:CDS | 40.0% |
| TGATGACAATATGCCAGCTA+GGG | + | chr6_4:15379000-15379019 | Msa0979050:CDS | 40.0% | |
| ! | TAGGGCCTTCGATAATTTTC+AGG | + | chr6_4:15379018-15379037 | Msa0979050:CDS | 40.0% |
| ! | ATTGCAGCCTTATACTGAGA+AGG | - | chr6_4:15379243-15379262 | None:intergenic | 40.0% |
| !!! | CAGCATGAGAAGGTTTTGAA+GGG | - | chr6_4:15379497-15379516 | None:intergenic | 40.0% |
| TCAAAACTAGCAGCATGAGA+AGG | - | chr6_4:15379507-15379526 | None:intergenic | 40.0% | |
| ! | GCTTTTCCTTGTAGCTTTTG+GGG | + | chr6_4:15379741-15379760 | Msa0979050:intron | 40.0% |
| GTCTAATGTGGAGAGATGAA+TGG | + | chr6_4:15379823-15379842 | Msa0979050:intron | 40.0% | |
| TACTGAGCAGCATCTTCTAT+TGG | + | chr6_4:15380570-15380589 | Msa0979050:exon | 40.0% | |
| ! | TTGGTTTGACAGCTTAGCTT+AGG | + | chr6_4:15380755-15380774 | Msa0979050:three_prime_UTR | 40.0% |
| TGGTTTGACAGCTTAGCTTA+GGG | + | chr6_4:15380756-15380775 | Msa0979050:three_prime_UTR | 40.0% | |
| !!! | TTTTGAGTTGAAAAGCGCGG+TGG | - | chr6_4:15375910-15375929 | None:intergenic | 45.0% |
| ! | AAGGAGATAAGTGGGGTGTT+AGG | + | chr6_4:15376950-15376969 | Msa0979050:five_prime_UTR | 45.0% |
| CTGCTTCTGCTTCTTCTTCT+TGG | + | chr6_4:15377112-15377131 | Msa0979050:CDS | 45.0% | |
| TTCATATCCGGACCCTCATT+CGG | + | chr6_4:15377137-15377156 | Msa0979050:CDS | 45.0% | |
| !! | TATCCATAGTTTTGCGGAGG+AGG | - | chr6_4:15377267-15377286 | None:intergenic | 45.0% |
| GGATATGAGCCTCAAACTAG+TGG | + | chr6_4:15377282-15377301 | Msa0979050:CDS | 45.0% | |
| TTTCTCTGATCGTCATGACG+GGG | - | chr6_4:15377315-15377334 | None:intergenic | 45.0% | |
| CTTTCTCTGATCGTCATGAC+GGG | - | chr6_4:15377316-15377335 | None:intergenic | 45.0% | |
| ! | TTATGTGATTTGGCATGGCC+TGG | + | chr6_4:15377517-15377536 | Msa0979050:intron | 45.0% |
| AAGTAGCATTGTCGGTGAGA+AGG | - | chr6_4:15377577-15377596 | None:intergenic | 45.0% | |
| ATTTCACCAAGAGCAACGAG+TGG | + | chr6_4:15377751-15377770 | Msa0979050:CDS | 45.0% | |
| AACCTTGGCTGCATTTGATG+AGG | + | chr6_4:15377962-15377981 | Msa0979050:CDS | 45.0% | |
| ATCCTCATCAAATGCAGCCA+AGG | - | chr6_4:15377967-15377986 | None:intergenic | 45.0% | |
| CAATGGGTGCAAAGGATGTA+GGG | - | chr6_4:15378332-15378351 | None:intergenic | 45.0% | |
| ACAATGGGTGCAAAGGATGT+AGG | - | chr6_4:15378333-15378352 | None:intergenic | 45.0% | |
| ACTCTGCTCAACGATTGTCA+TGG | - | chr6_4:15378364-15378383 | None:intergenic | 45.0% | |
| ATGACAATCGTTGAGCAGAG+TGG | + | chr6_4:15378363-15378382 | Msa0979050:CDS | 45.0% | |
| ! | TGGAGGCCAATACCATGTTT+TGG | + | chr6_4:15378383-15378402 | Msa0979050:CDS | 45.0% |
| !! | TAGATGGCTTTGTTTGGTGC+AGG | + | chr6_4:15378754-15378773 | Msa0979050:intron | 45.0% |
| ! | GTATTGACACTGAACATGGG+AGG | + | chr6_4:15378786-15378805 | Msa0979050:CDS | 45.0% |
| AACTCCTTCATCATGTCCCA+AGG | - | chr6_4:15378980-15378999 | None:intergenic | 45.0% | |
| AAATTATCGAAGGCCCTAGC+TGG | - | chr6_4:15379016-15379035 | None:intergenic | 45.0% | |
| CATTCCTCCTTCACGAAAAG+AGG | + | chr6_4:15379185-15379204 | Msa0979050:CDS | 45.0% | |
| ! | AATGCTGCCTCTTTTCGTGA+AGG | - | chr6_4:15379195-15379214 | None:intergenic | 45.0% |
| ! | ATTTGCTCTCGCAGCATTGA+TGG | + | chr6_4:15379212-15379231 | Msa0979050:CDS | 45.0% |
| AAAGACGCCGAACCATAAGA+GGG | - | chr6_4:15379438-15379457 | None:intergenic | 45.0% | |
| AAAAGACGCCGAACCATAAG+AGG | - | chr6_4:15379439-15379458 | None:intergenic | 45.0% | |
| !! | TCTTATGGTTCGGCGTCTTT+TGG | + | chr6_4:15379438-15379457 | Msa0979050:CDS | 45.0% |
| ACAGAAGATGCCGAACCATA+AGG | - | chr6_4:15379474-15379493 | None:intergenic | 45.0% | |
| !! | GCAGCATGAGAAGGTTTTGA+AGG | - | chr6_4:15379498-15379517 | None:intergenic | 45.0% |
| !!! | CTCATGCTGCTAGTTTTGAG+CGG | + | chr6_4:15379508-15379527 | Msa0979050:CDS | 45.0% |
| ! | CAACTTGTTTGACGACGTCT+TGG | - | chr6_4:15379560-15379579 | None:intergenic | 45.0% |
| GACGTCGTCAAACAAGTTGT+TGG | + | chr6_4:15379561-15379580 | Msa0979050:CDS | 45.0% | |
| TAAGTAGAACTTGGGGCAGA+AGG | - | chr6_4:15379594-15379613 | None:intergenic | 45.0% | |
| AGATAGCCCCAAAAGCTACA+AGG | - | chr6_4:15379750-15379769 | None:intergenic | 45.0% | |
| TTGTCAACTGCCATTCATCC+AGG | + | chr6_4:15379929-15379948 | Msa0979050:intron | 45.0% | |
| AAAGATATGGCCTTCGGATG+TGG | + | chr6_4:15380131-15380150 | Msa0979050:intron | 45.0% | |
| AAGATATGGCCTTCGGATGT+GGG | + | chr6_4:15380132-15380151 | Msa0979050:intron | 45.0% | |
| TGACAGACATGTTGCGAATG+CGG | + | chr6_4:15380489-15380508 | Msa0979050:intron | 45.0% | |
| GAGCAGCATCTTCTATTGGA+AGG | + | chr6_4:15380574-15380593 | Msa0979050:exon | 45.0% | |
| TTTGACAGCTTAGCTTAGGG+TGG | + | chr6_4:15380759-15380778 | Msa0979050:three_prime_UTR | 45.0% | |
| !!! | ATTCTTTAATTTTTTTTATA+TGG | + | chr6_4:15380611-15380630 | Msa0979050:three_prime_UTR | 5.0% |
| TCATATCCGGACCCTCATTC+GGG | + | chr6_4:15377138-15377157 | Msa0979050:CDS | 50.0% | |
| GGAGGTCGGGCATCATAATA+TGG | - | chr6_4:15377243-15377262 | None:intergenic | 50.0% | |
| !! | CTGAGCTCGATGTTGCTTTC+AGG | + | chr6_4:15377855-15377874 | Msa0979050:intron | 50.0% |
| AGCTTGCATCACATCGGGAA+TGG | + | chr6_4:15377900-15377919 | Msa0979050:CDS | 50.0% | |
| TGGTCCGAATCCCTATGAAC+AGG | + | chr6_4:15377920-15377939 | Msa0979050:CDS | 50.0% | |
| CCATCCCCGAATCCAAAACA+AGG | - | chr6_4:15377999-15378018 | None:intergenic | 50.0% | |
| !!! | CCTTGTTTTGGATTCGGGGA+TGG | + | chr6_4:15377996-15378015 | Msa0979050:CDS | 50.0% |
| ACAATCGTTGAGCAGAGTGG+AGG | + | chr6_4:15378366-15378385 | Msa0979050:CDS | 50.0% | |
| GGTGATAATTGCAGATGGCC+AGG | + | chr6_4:15378404-15378423 | Msa0979050:CDS | 50.0% | |
| TTATCACCTGGCCTCGACAA+TGG | - | chr6_4:15378843-15378862 | None:intergenic | 50.0% | |
| !! | TTGGTGTTGGAGATGGACCT+TGG | + | chr6_4:15378960-15378979 | Msa0979050:CDS | 50.0% |
| ! | TGGTGTTGGAGATGGACCTT+GGG | + | chr6_4:15378961-15378980 | Msa0979050:CDS | 50.0% |
| TGGACCTTGGGACATGATGA+AGG | + | chr6_4:15378973-15378992 | Msa0979050:CDS | 50.0% | |
| !! | ACCATAAGAGGGTGTTGGGA+GGG | - | chr6_4:15379427-15379446 | None:intergenic | 50.0% |
| !! | AACCATAAGAGGGTGTTGGG+AGG | - | chr6_4:15379428-15379447 | None:intergenic | 50.0% |
| !! | CCGAACCATAAGAGGGTGTT+GGG | - | chr6_4:15379431-15379450 | None:intergenic | 50.0% |
| CCCAACACCCTCTTATGGTT+CGG | + | chr6_4:15379428-15379447 | Msa0979050:CDS | 50.0% | |
| TGGTACGAAGGTGGGTAAGA+AGG | - | chr6_4:15379540-15379559 | None:intergenic | 50.0% | |
| TTGACGACGTCTTGGTACGA+AGG | - | chr6_4:15379552-15379571 | None:intergenic | 50.0% | |
| GCCATGTTCTCGATCTCGAT+CGG | + | chr6_4:15379657-15379676 | Msa0979050:intron | 50.0% | |
| CCATGTTCTCGATCTCGATC+GGG | + | chr6_4:15379658-15379677 | Msa0979050:intron | 50.0% | |
| TTCAAACGTGTCCCATCTGC+AGG | + | chr6_4:15380520-15380539 | Msa0979050:CDS | 50.0% | |
| TTAATGGGGCTCCTGCAGAT+GGG | - | chr6_4:15380534-15380553 | None:intergenic | 50.0% | |
| GGGGGGTCAAAGTTCCAAAG+AGG | + | chr6_4:15377050-15377069 | Msa0979050:CDS | 55.0% | |
| CCTGACCGTAACCCGAATGA+GGG | - | chr6_4:15377152-15377171 | None:intergenic | 55.0% | |
| ! | CCTCATTCGGGTTACGGTCA+GGG | + | chr6_4:15377150-15377169 | Msa0979050:CDS | 55.0% |
| GGTTGTTGTGACTCGTGCGT+AGG | - | chr6_4:15377210-15377229 | None:intergenic | 55.0% | |
| !! | TAGTTTTGCGGAGGAGGAGG+AGG | - | chr6_4:15377261-15377280 | None:intergenic | 55.0% |
| !! | CCATAGTTTTGCGGAGGAGG+AGG | - | chr6_4:15377264-15377283 | None:intergenic | 55.0% |
| CCTCCTCCTCCGCAAAACTA+TGG | + | chr6_4:15377261-15377280 | Msa0979050:CDS | 55.0% | |
| ! | GGCACTCTGCCACTAGTTTG+AGG | - | chr6_4:15377294-15377313 | None:intergenic | 55.0% |
| ACTGAAGCTCTTGCACGTGC+AGG | + | chr6_4:15377696-15377715 | Msa0979050:CDS | 55.0% | |
| ACCAAGAGCAACGAGTGGAC+AGG | + | chr6_4:15377756-15377775 | Msa0979050:CDS | 55.0% | |
| ACCTGTCCACTCGTTGCTCT+TGG | - | chr6_4:15377760-15377779 | None:intergenic | 55.0% | |
| GAGCAACGAGTGGACAGGTT+AGG | + | chr6_4:15377761-15377780 | Msa0979050:intron | 55.0% | |
| ! | GCTGCCTCTTTTCGTGAAGG+AGG | - | chr6_4:15379192-15379211 | None:intergenic | 55.0% |
| GGCGACTCTAGTTGGAGCAT+TGG | - | chr6_4:15379406-15379425 | None:intergenic | 55.0% | |
| ! | GCCGAACCATAAGAGGGTGT+TGG | - | chr6_4:15379432-15379451 | None:intergenic | 55.0% |
| CGACGTCTTGGTACGAAGGT+GGG | - | chr6_4:15379548-15379567 | None:intergenic | 55.0% | |
| ACGACGTCTTGGTACGAAGG+TGG | - | chr6_4:15379549-15379568 | None:intergenic | 55.0% | |
| CCCGATCGAGATCGAGAACA+TGG | - | chr6_4:15379661-15379680 | None:intergenic | 55.0% | |
| TCGATCTCGATCGGGCATGT+TGG | + | chr6_4:15379666-15379685 | Msa0979050:intron | 55.0% | |
| TACCTGATGCCCACATCCGA+AGG | - | chr6_4:15380144-15380163 | None:intergenic | 55.0% | |
| GTTAATGGGGCTCCTGCAGA+TGG | - | chr6_4:15380535-15380554 | None:intergenic | 55.0% | |
| CCGTAACCCGAATGAGGGTC+CGG | - | chr6_4:15377147-15377166 | None:intergenic | 60.0% | |
| ! | CCGGACCCTCATTCGGGTTA+CGG | + | chr6_4:15377144-15377163 | Msa0979050:CDS | 60.0% |
| ! | CCCTCATTCGGGTTACGGTC+AGG | + | chr6_4:15377149-15377168 | Msa0979050:CDS | 60.0% |
| CCCTGACCGTAACCCGAATG+AGG | - | chr6_4:15377153-15377172 | None:intergenic | 60.0% | |
| ! | CATTCGGGTTACGGTCAGGG+CGG | + | chr6_4:15377153-15377172 | Msa0979050:CDS | 60.0% |
| TTTGCGGAGGAGGAGGAGGT+CGG | - | chr6_4:15377257-15377276 | None:intergenic | 60.0% | |
| ACATGGGAGGCTCAGTCCAC+AGG | + | chr6_4:15378799-15378818 | Msa0979050:CDS | 60.0% | |
| TCCACAGGAGCAGAAGACCG+TGG | + | chr6_4:15378814-15378833 | Msa0979050:CDS | 60.0% | |
| TCCACGGTCTTCTGCTCCTG+TGG | - | chr6_4:15378818-15378837 | None:intergenic | 60.0% | |
| GACCGTGGATGCCATTGTCG+AGG | + | chr6_4:15378829-15378848 | Msa0979050:CDS | 60.0% | |
| GGCCTCGACAATGGCATCCA+CGG | - | chr6_4:15378834-15378853 | None:intergenic | 60.0% | |
| TGGATGCCATTGTCGAGGCC+AGG | + | chr6_4:15378834-15378853 | Msa0979050:CDS | 60.0% | |
| GTTGGGAGGGCGACTCTAGT+TGG | - | chr6_4:15379414-15379433 | None:intergenic | 60.0% | |
| GCCCTCCCAACACCCTCTTA+TGG | + | chr6_4:15379423-15379442 | Msa0979050:CDS | 60.0% | |
| TTGCGGAGGAGGAGGAGGTC+GGG | - | chr6_4:15377256-15377275 | None:intergenic | 65.0% | |
| GGCCTTCGGATGTGGGCATC+AGG | + | chr6_4:15380139-15380158 | Msa0979050:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 15375856 | 15380879 | 15375856 | ID=Msa0979050;Name=Msa0979050 |
| chr6_4 | mRNA | 15375856 | 15380879 | 15375856 | ID=Msa0979050-mRNA-1;Parent=Msa0979050;Name=Msa0979050-mRNA-1;_AED=0.18;_eAED=0.18;_QI=274|0.9|1|1|0.8|0.72|11|304|467 |
| chr6_4 | exon | 15375856 | 15375981 | 15375856 | ID=Msa0979050-mRNA-1:exon:5038;Parent=Msa0979050-mRNA-1 |
| chr6_4 | exon | 15376900 | 15377386 | 15376900 | ID=Msa0979050-mRNA-1:exon:5039;Parent=Msa0979050-mRNA-1 |
| chr6_4 | exon | 15377693 | 15377777 | 15377693 | ID=Msa0979050-mRNA-1:exon:5040;Parent=Msa0979050-mRNA-1 |
| chr6_4 | exon | 15377877 | 15378017 | 15377877 | ID=Msa0979050-mRNA-1:exon:5041;Parent=Msa0979050-mRNA-1 |
| chr6_4 | exon | 15378112 | 15378225 | 15378112 | ID=Msa0979050-mRNA-1:exon:5042;Parent=Msa0979050-mRNA-1 |
| chr6_4 | exon | 15378328 | 15378425 | 15378328 | ID=Msa0979050-mRNA-1:exon:5043;Parent=Msa0979050-mRNA-1 |
| chr6_4 | exon | 15378776 | 15378855 | 15378776 | ID=Msa0979050-mRNA-1:exon:5044;Parent=Msa0979050-mRNA-1 |
| chr6_4 | exon | 15378934 | 15379039 | 15378934 | ID=Msa0979050-mRNA-1:exon:5045;Parent=Msa0979050-mRNA-1 |
| chr6_4 | exon | 15379153 | 15379280 | 15379153 | ID=Msa0979050-mRNA-1:exon:5046;Parent=Msa0979050-mRNA-1 |
| chr6_4 | exon | 15379392 | 15379623 | 15379392 | ID=Msa0979050-mRNA-1:exon:5047;Parent=Msa0979050-mRNA-1 |
| chr6_4 | exon | 15380495 | 15380879 | 15380495 | ID=Msa0979050-mRNA-1:exon:5048;Parent=Msa0979050-mRNA-1 |
| chr6_4 | five_prime_UTR | 15375856 | 15375981 | 15375856 | ID=Msa0979050-mRNA-1:five_prime_utr;Parent=Msa0979050-mRNA-1 |
| chr6_4 | five_prime_UTR | 15376900 | 15377047 | 15376900 | ID=Msa0979050-mRNA-1:five_prime_utr;Parent=Msa0979050-mRNA-1 |
| chr6_4 | CDS | 15377048 | 15377386 | 15377048 | ID=Msa0979050-mRNA-1:cds;Parent=Msa0979050-mRNA-1 |
| chr6_4 | CDS | 15377693 | 15377777 | 15377693 | ID=Msa0979050-mRNA-1:cds;Parent=Msa0979050-mRNA-1 |
| chr6_4 | CDS | 15377877 | 15378017 | 15377877 | ID=Msa0979050-mRNA-1:cds;Parent=Msa0979050-mRNA-1 |
| chr6_4 | CDS | 15378112 | 15378225 | 15378112 | ID=Msa0979050-mRNA-1:cds;Parent=Msa0979050-mRNA-1 |
| chr6_4 | CDS | 15378328 | 15378425 | 15378328 | ID=Msa0979050-mRNA-1:cds;Parent=Msa0979050-mRNA-1 |
| chr6_4 | CDS | 15378776 | 15378855 | 15378776 | ID=Msa0979050-mRNA-1:cds;Parent=Msa0979050-mRNA-1 |
| chr6_4 | CDS | 15378934 | 15379039 | 15378934 | ID=Msa0979050-mRNA-1:cds;Parent=Msa0979050-mRNA-1 |
| chr6_4 | CDS | 15379153 | 15379280 | 15379153 | ID=Msa0979050-mRNA-1:cds;Parent=Msa0979050-mRNA-1 |
| chr6_4 | CDS | 15379392 | 15379623 | 15379392 | ID=Msa0979050-mRNA-1:cds;Parent=Msa0979050-mRNA-1 |
| chr6_4 | CDS | 15380495 | 15380575 | 15380495 | ID=Msa0979050-mRNA-1:cds;Parent=Msa0979050-mRNA-1 |
| chr6_4 | three_prime_UTR | 15380576 | 15380879 | 15380576 | ID=Msa0979050-mRNA-1:three_prime_utr;Parent=Msa0979050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
