Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387300 | XP_013461985.1 | 98.472 | 458 | 4 | 1 | 1 | 455 | 1 | 458 | 0.0 | 923 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387300 | sp|P28011|AAT1_MEDSA | 99.761 | 418 | 1 | 0 | 38 | 455 | 1 | 418 | 0.0 | 855 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387300 | A0A072VCX2 | 98.472 | 458 | 4 | 1 | 1 | 455 | 1 | 458 | 0.0 | 923 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033970 | Msa0387300 | 0.830072 | 3.608823e-55 | -8.615850e-47 |
| Msa0036560 | Msa0387300 | -0.811477 | 6.865930e-51 | -8.615850e-47 |
| Msa0073970 | Msa0387300 | 0.813216 | 2.863087e-51 | -8.615850e-47 |
| Msa0081920 | Msa0387300 | 0.841500 | 4.576771e-58 | -8.615850e-47 |
| Msa0121970 | Msa0387300 | 0.816810 | 4.564683e-52 | -8.615850e-47 |
| Msa0128030 | Msa0387300 | 0.841938 | 3.506840e-58 | -8.615850e-47 |
| Msa0130340 | Msa0387300 | -0.804818 | 1.799726e-49 | -8.615850e-47 |
| Msa0166620 | Msa0387300 | 0.825607 | 4.275533e-54 | -8.615850e-47 |
| Msa0174810 | Msa0387300 | 0.820862 | 5.479792e-53 | -8.615850e-47 |
| Msa0181140 | Msa0387300 | 0.801312 | 9.555839e-49 | -8.615850e-47 |
| Msa0369660 | Msa0387300 | 0.818069 | 2.375888e-52 | -8.615850e-47 |
| Msa0381470 | Msa0387300 | 0.812320 | 4.499404e-51 | -8.615850e-47 |
| Msa0387300 | Msa0434140 | 0.969816 | 1.109094e-130 | -8.615850e-47 |
| Msa0387300 | Msa0437460 | 0.803603 | 3.222219e-49 | -8.615850e-47 |
| Msa0387300 | Msa0455830 | 0.834424 | 3.020794e-56 | -8.615850e-47 |
| Msa0387300 | Msa0463890 | 0.806869 | 6.672183e-50 | -8.615850e-47 |
| Msa0387300 | Msa0477660 | 0.982182 | 1.937018e-154 | -8.615850e-47 |
| Msa0387300 | Msa0480770 | 0.805988 | 1.023035e-49 | -8.615850e-47 |
| Msa0387300 | Msa0521720 | 0.981627 | 4.724922e-153 | -8.615850e-47 |
| Msa0387300 | Msa0611300 | -0.805550 | 1.264434e-49 | -8.615850e-47 |
| Msa0387300 | Msa0622070 | 0.804837 | 1.783234e-49 | -8.615850e-47 |
| Msa0387300 | Msa0651600 | -0.801948 | 7.075553e-49 | -8.615850e-47 |
| Msa0387300 | Msa0652700 | 0.807749 | 4.341658e-50 | -8.615850e-47 |
| Msa0387300 | Msa0667240 | 0.804124 | 2.510913e-49 | -8.615850e-47 |
| Msa0387300 | Msa0677590 | -0.800583 | 1.346291e-48 | -8.615850e-47 |
| Msa0387300 | Msa0721260 | 0.800676 | 1.289131e-48 | -8.615850e-47 |
| Msa0387300 | Msa0749500 | 0.845703 | 3.442704e-59 | -8.615850e-47 |
| Msa0387300 | Msa0749510 | 0.850828 | 1.319538e-60 | -8.615850e-47 |
| Msa0387300 | Msa0753410 | 0.800784 | 1.225023e-48 | -8.615850e-47 |
| Msa0387300 | Msa0793910 | 0.837888 | 3.984931e-57 | -8.615850e-47 |
| Msa0387300 | Msa0831430 | 0.843090 | 1.734669e-58 | -8.615850e-47 |
| Msa0387300 | Msa0833150 | -0.824182 | 9.269550e-54 | -8.615850e-47 |
| Msa0387300 | Msa0945230 | 0.805063 | 1.599801e-49 | -8.615850e-47 |
| Msa0387300 | Msa0962260 | 0.803355 | 3.627328e-49 | -8.615850e-47 |
| Msa0387300 | Msa0974570 | -0.814788 | 1.289119e-51 | -8.615850e-47 |
| Msa0387300 | Msa1039650 | 0.815541 | 8.767225e-52 | -8.615850e-47 |
| Msa0387300 | Msa1106760 | -0.811948 | 5.422801e-51 | -8.615850e-47 |
| Msa0387300 | Msa1120320 | 0.831237 | 1.871011e-55 | -8.615850e-47 |
| Msa0387300 | Msa1174450 | 0.830291 | 3.189648e-55 | -8.615850e-47 |
| Msa0387300 | Msa1314810 | 0.831146 | 1.969643e-55 | -8.615850e-47 |
| Msa0274890 | Msa0387300 | -0.805954 | 1.040267e-49 | -8.615850e-47 |
| Msa0319060 | Msa0387300 | -0.816528 | 5.278687e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387300 | MtrunA17_Chr3g0139821 | 98.472 | 458 | 4 | 1 | 1 | 455 | 1 | 458 | 0.0 | 923 |
| Msa0387300 | MtrunA17_Chr1g0149721 | 54.436 | 417 | 188 | 2 | 32 | 447 | 42 | 457 | 1.73e-164 | 471 |
| Msa0387300 | MtrunA17_Chr4g0041371 | 51.005 | 398 | 193 | 1 | 53 | 450 | 25 | 420 | 6.26e-146 | 423 |
| Msa0387300 | MtrunA17_Chr4g0041351 | 53.448 | 232 | 108 | 0 | 219 | 450 | 3 | 234 | 2.64e-88 | 269 |
| Msa0387300 | MtrunA17_Chr4g0041361 | 41.481 | 135 | 76 | 2 | 53 | 186 | 20 | 152 | 4.19e-26 | 103 |
| Msa0387300 | MtrunA17_Chr4g0005811 | 50.000 | 54 | 27 | 0 | 325 | 378 | 23 | 76 | 4.46e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387300 | AT5G11520.1 | 79.310 | 435 | 90 | 0 | 19 | 453 | 13 | 447 | 0.0 | 743 |
| Msa0387300 | AT5G19550.1 | 82.921 | 404 | 69 | 0 | 52 | 455 | 2 | 405 | 0.0 | 717 |
| Msa0387300 | AT1G62800.2 | 72.772 | 404 | 110 | 0 | 52 | 455 | 2 | 405 | 0.0 | 641 |
| Msa0387300 | AT1G62800.1 | 72.277 | 404 | 110 | 1 | 52 | 455 | 2 | 403 | 0.0 | 633 |
| Msa0387300 | AT1G62800.3 | 70.710 | 338 | 99 | 0 | 52 | 389 | 2 | 339 | 0.0 | 526 |
| Msa0387300 | AT4G31990.1 | 54.545 | 396 | 178 | 2 | 53 | 447 | 51 | 445 | 1.12e-160 | 462 |
| Msa0387300 | AT4G31990.2 | 54.545 | 396 | 178 | 2 | 53 | 447 | 51 | 445 | 1.12e-160 | 462 |
| Msa0387300 | AT4G31990.4 | 54.545 | 396 | 178 | 2 | 53 | 447 | 46 | 440 | 1.22e-160 | 461 |
| Msa0387300 | AT4G31990.3 | 54.545 | 396 | 178 | 2 | 53 | 447 | 51 | 445 | 2.30e-160 | 461 |
| Msa0387300 | AT2G30970.1 | 52.174 | 391 | 185 | 1 | 61 | 451 | 39 | 427 | 2.61e-147 | 427 |
| Msa0387300 | AT2G30970.2 | 52.174 | 391 | 185 | 1 | 61 | 451 | 39 | 427 | 2.61e-147 | 427 |
Find 158 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAAATCTTTGTATGGTTT+TGG | 0.106318 | 3_1:+91195834 | Msa0387300:three_prime_UTR |
| AGGAATGTATTCTTAATTTA+AGG | 0.133082 | 3_1:+91195927 | Msa0387300:three_prime_UTR |
| ACACCCAAGTTGAGCTTAAT+TGG | 0.150989 | 3_1:-91191725 | None:intergenic |
| GCGAAGAACATGGGTCTTTA+TGG | 0.189310 | 3_1:+91193904 | Msa0387300:CDS |
| CAAGAAAGAAAGAAACTTTA+TGG | 0.229625 | 3_1:-91190941 | None:intergenic |
| ATGTATTATTTCCTTGGTTT+TGG | 0.230843 | 3_1:-91191035 | None:intergenic |
| TTTCTTTGACAGTGCTTATC+AGG | 0.256759 | 3_1:+91193545 | Msa0387300:CDS |
| AGTCACATTATCAAGCAAAT+TGG | 0.295698 | 3_1:+91194734 | Msa0387300:CDS |
| ACCACTGTTCAAGGCTTATC+TGG | 0.296478 | 3_1:+91192953 | Msa0387300:CDS |
| TTGAAAACTCTCTCTATATA+TGG | 0.304585 | 3_1:-91190916 | None:intergenic |
| AGCCAGATGTGGGACTGTTT+TGG | 0.314178 | 3_1:-91195493 | None:intergenic |
| AACGACTCTGTCGTAGGATT+TGG | 0.314966 | 3_1:+91195778 | Msa0387300:three_prime_UTR |
| TTTCCTTGTACATCTGTTGC+AGG | 0.318165 | 3_1:+91195713 | Msa0387300:three_prime_UTR |
| GCCCTGCTATTCAAGAGAAC+AGG | 0.323064 | 3_1:+91192927 | Msa0387300:intron |
| AAGTCAAGCCCTCGTGTTGC+TGG | 0.342959 | 3_1:-91193224 | None:intergenic |
| CATCAGATGTCAGGTATATA+TGG | 0.350575 | 3_1:-91194814 | None:intergenic |
| TATTCTATGTATTATTTCCT+TGG | 0.356130 | 3_1:-91191041 | None:intergenic |
| GATCTTGGTTCTGCCCCATC+TGG | 0.359579 | 3_1:+91193414 | Msa0387300:CDS |
| AATAAAGGTTTCATTGTTGA+TGG | 0.361569 | 3_1:-91195614 | None:intergenic |
| TACTCAAGTCCTCCTATTCA+TGG | 0.370617 | 3_1:+91194270 | Msa0387300:CDS |
| AAGGAGTATATTCCAATTGT+TGG | 0.372264 | 3_1:+91192643 | Msa0387300:CDS |
| TGTACAAGGAAAGTTCTCTA+TGG | 0.378140 | 3_1:-91195702 | None:intergenic |
| TGCTGATGGTGGAGAATTGC+TGG | 0.380748 | 3_1:+91193867 | Msa0387300:CDS |
| ACAGGACTTCTTGAGGATCT+TGG | 0.382872 | 3_1:+91193399 | Msa0387300:intron |
| TATACTTGCCAACACCTACT+TGG | 0.385684 | 3_1:+91193138 | Msa0387300:CDS |
| GTACTGGTTCGCTAAGAGTT+GGG | 0.400671 | 3_1:+91192975 | Msa0387300:CDS |
| AAGAGTCTCAAATCTTTGTA+TGG | 0.405439 | 3_1:+91195828 | Msa0387300:three_prime_UTR |
| CACCCAAGTTGAGCTTAATT+GGG | 0.413455 | 3_1:-91191724 | None:intergenic |
| GGAATGTATTCTTAATTTAA+GGG | 0.415133 | 3_1:+91195928 | Msa0387300:three_prime_UTR |
| TATTTCCTATGAGAACTTAA+CGG | 0.421876 | 3_1:-91195742 | None:intergenic |
| TATGGAGTAATGAATTTGTT+TGG | 0.425873 | 3_1:-91190898 | None:intergenic |
| CTCCAAAACAGTCCCACATC+TGG | 0.425931 | 3_1:+91195491 | Msa0387300:CDS |
| ATTGGAATGTTTACTTTCAC+AGG | 0.428060 | 3_1:+91194752 | Msa0387300:CDS |
| ATCTTATCGCATTCTTACCT+TGG | 0.428749 | 3_1:-91190763 | None:intergenic |
| GTTCAAGGCTTATCTGGTAC+TGG | 0.432196 | 3_1:+91192959 | Msa0387300:CDS |
| ACACCGAGGATAGGATCTTC+AGG | 0.432488 | 3_1:-91191255 | None:intergenic |
| ATACTTGCCAACACCTACTT+GGG | 0.432758 | 3_1:+91193139 | Msa0387300:CDS |
| AAGTTGAGCTTAATTGGGCT+TGG | 0.436518 | 3_1:-91191719 | None:intergenic |
| AGGAGTATATTCCAATTGTT+GGG | 0.451682 | 3_1:+91192644 | Msa0387300:CDS |
| TGCAGGAGGATTAGCATGGC+TGG | 0.453349 | 3_1:+91195462 | Msa0387300:intron |
| AACAGGGTTACCACTGTTCA+AGG | 0.453722 | 3_1:+91192944 | Msa0387300:CDS |
| GTAATGAATTTGTTTGGTTG+TGG | 0.455458 | 3_1:-91190892 | None:intergenic |
| GTTGTTGATTCGAGAATAAC+CGG | 0.456808 | 3_1:-91191081 | None:intergenic |
| ACCCTGTTCTCTTGAATAGC+AGG | 0.458243 | 3_1:-91192929 | None:intergenic |
| GTTCGTTTGTTTGTTGCTGA+TGG | 0.463816 | 3_1:+91193853 | Msa0387300:CDS |
| GTTTCCTCTTACAAAAGAAA+AGG | 0.465093 | 3_1:+91195865 | Msa0387300:three_prime_UTR |
| TGATCCAACGCTTGAACAAT+GGG | 0.468112 | 3_1:+91193482 | Msa0387300:CDS |
| CCATGTTCTTCGCATAACTC+TGG | 0.469261 | 3_1:-91193894 | None:intergenic |
| AAATCAGCGAGCCCAACAAT+TGG | 0.471038 | 3_1:-91192655 | None:intergenic |
| ACACGAGGGCTTGACTTTCA+AGG | 0.475131 | 3_1:+91193230 | Msa0387300:CDS |
| CATATATACCTGACATCTGA+TGG | 0.476268 | 3_1:+91194815 | Msa0387300:CDS |
| TGACTGGACTATTGAGTTGA+AGG | 0.476617 | 3_1:+91194416 | Msa0387300:CDS |
| ACAATGGATGCACCATGAAT+AGG | 0.476661 | 3_1:-91194282 | None:intergenic |
| CATTGAAATTTAAGCAACTC+GGG | 0.476742 | 3_1:-91195538 | None:intergenic |
| TGCTCCCATTGTTCAAGCGT+TGG | 0.479098 | 3_1:-91193486 | None:intergenic |
| GGTACTGGTTCGCTAAGAGT+TGG | 0.481361 | 3_1:+91192974 | Msa0387300:CDS |
| GTCAAGATGGAAACTTGCTC+AGG | 0.481636 | 3_1:-91194782 | None:intergenic |
| AATAGGAGGACTTGAGTACA+TGG | 0.483790 | 3_1:-91194265 | None:intergenic |
| GCCAACTGAAACTTGTGATT+AGG | 0.484457 | 3_1:+91194241 | Msa0387300:CDS |
| AATTTAAGGGTTTGACATTG+TGG | 0.484882 | 3_1:+91195941 | Msa0387300:three_prime_UTR |
| TCAGGGATTTGTACAATGAC+TGG | 0.487365 | 3_1:+91194400 | Msa0387300:intron |
| ATGGTACTCTTTAGTCAAGA+TGG | 0.489731 | 3_1:-91194795 | None:intergenic |
| CGTTAACGATCAAAATCAAA+TGG | 0.490670 | 3_1:+91191164 | Msa0387300:CDS |
| TTGATCCAACGCTTGAACAA+TGG | 0.495724 | 3_1:+91193481 | Msa0387300:CDS |
| CTAACATGTCATTCAATAGT+TGG | 0.496646 | 3_1:-91192419 | None:intergenic |
| GTACAAGGAAAGTTCTCTAT+GGG | 0.497001 | 3_1:-91195701 | None:intergenic |
| GAATAGGTACACCAGGTGAT+TGG | 0.497772 | 3_1:+91194711 | Msa0387300:intron |
| TCAGCAACAAACAAACGAAC+AGG | 0.500179 | 3_1:-91193850 | None:intergenic |
| TCAGAAGAAGCGGTTGGAGA+AGG | 0.502905 | 3_1:-91191204 | None:intergenic |
| TACTGGTTCGCTAAGAGTTG+GGG | 0.504319 | 3_1:+91192976 | Msa0387300:CDS |
| GAGAGCCGTTAAGTTCTCAT+AGG | 0.505623 | 3_1:+91195737 | Msa0387300:three_prime_UTR |
| TGTCTTACCCATCAGATGTC+AGG | 0.505685 | 3_1:-91194823 | None:intergenic |
| TCACTACCTGTCCTTGAGAA+TGG | 0.510089 | 3_1:-91194310 | None:intergenic |
| GACACGTGATAACAATAAGA+AGG | 0.512866 | 3_1:+91190856 | Msa0387300:five_prime_UTR |
| ATTCTTCTTCACCTGATCGC+AGG | 0.513737 | 3_1:+91191112 | Msa0387300:CDS |
| ATAAAGGTTTCATTGTTGAT+GGG | 0.514495 | 3_1:-91195613 | None:intergenic |
| TTCCTTGTACATCTGTTGCA+GGG | 0.516268 | 3_1:+91195714 | Msa0387300:three_prime_UTR |
| AAGCCCAATTAAGCTCAACT+TGG | 0.516784 | 3_1:+91191721 | Msa0387300:CDS |
| CGTTTGTTTGTTGCTGATGG+TGG | 0.521870 | 3_1:+91193856 | Msa0387300:CDS |
| CCAGAGTTATGCGAAGAACA+TGG | 0.522554 | 3_1:+91193894 | Msa0387300:CDS |
| CTTGAGAATGGCGGCCACAA+TGG | 0.525791 | 3_1:-91194298 | None:intergenic |
| ATTAAGCTCAACTTGGGTGT+TGG | 0.529955 | 3_1:+91191728 | Msa0387300:CDS |
| ATAGTGTTTAGCCTGCGATC+AGG | 0.535819 | 3_1:-91191123 | None:intergenic |
| ACGAACGAGATGAGCGAAGA+CGG | 0.543404 | 3_1:-91191229 | None:intergenic |
| ATCTGCATCTAGACTTCCAC+TGG | 0.543479 | 3_1:-91193821 | None:intergenic |
| TTATCAATTCATCCCCGTGA+TGG | 0.545641 | 3_1:+91195565 | Msa0387300:three_prime_UTR |
| CATGTTCTTCGCATAACTCT+GGG | 0.545873 | 3_1:-91193893 | None:intergenic |
| TGGCCGCCATTCTCAAGGAC+AGG | 0.547950 | 3_1:+91194304 | Msa0387300:CDS |
| ATAAGATTCTAACCTCAGTT+CGG | 0.549064 | 3_1:-91191757 | None:intergenic |
| TGATAAGCACTGTCAAAGAA+AGG | 0.550216 | 3_1:-91193543 | None:intergenic |
| TTTGTATGATTGCCCCAAGT+AGG | 0.551425 | 3_1:-91193152 | None:intergenic |
| AGTCAGCGGATGTTTCAAGC+AGG | 0.552000 | 3_1:+91194211 | Msa0387300:CDS |
| GTTCCTTACAGGACTTCTTG+AGG | 0.552621 | 3_1:+91193392 | Msa0387300:intron |
| ATACTCTCGTGAACTTTATG+CGG | 0.553386 | 3_1:-91190971 | None:intergenic |
| ACATTGAAATTTAAGCAACT+CGG | 0.554651 | 3_1:-91195539 | None:intergenic |
| GCCTAATCACAAGTTTCAGT+TGG | 0.558972 | 3_1:-91194242 | None:intergenic |
| TCAATTCATCCCCGTGATGG+TGG | 0.561810 | 3_1:+91195568 | Msa0387300:three_prime_UTR |
| GCAAAACAACAGATCCAGAT+GGG | 0.564621 | 3_1:-91193428 | None:intergenic |
| ATGTACTAGTAGTAGTCGGC+GGG | 0.565587 | 3_1:-91190796 | None:intergenic |
| ACACGTGATAACAATAAGAA+GGG | 0.569930 | 3_1:+91190857 | Msa0387300:five_prime_UTR |
| TTTGATGCTTTACGTGCTAG+AGG | 0.574452 | 3_1:+91194477 | Msa0387300:CDS |
| ACGGAATCAGAAGAAGCGGT+TGG | 0.574811 | 3_1:-91191210 | None:intergenic |
| TGAAATGCTTACAATGCTCA+AGG | 0.575001 | 3_1:-91193941 | None:intergenic |
| TATATACAGCATGCGCCCAC+CGG | 0.578843 | 3_1:+91191062 | Msa0387300:exon |
| CATTGTGGCCGCCATTCTCA+AGG | 0.579863 | 3_1:+91194299 | Msa0387300:CDS |
| GGAAGGTAAACCCCTTGTGT+TGG | 0.582281 | 3_1:+91192374 | Msa0387300:intron |
| GCTCCTGAAGATCCTATCCT+CGG | 0.583735 | 3_1:+91191252 | Msa0387300:CDS |
| TGCAATTGAATAGGTACACC+AGG | 0.584729 | 3_1:+91194704 | Msa0387300:intron |
| CCCTGCTATTCAAGAGAACA+GGG | 0.585827 | 3_1:+91192928 | Msa0387300:CDS |
| TACTATGCTCCAGCAACACG+AGG | 0.591280 | 3_1:+91193215 | Msa0387300:CDS |
| AGCGTTGGATCAACACCAGT+AGG | 0.595444 | 3_1:-91193471 | None:intergenic |
| GGTCTTTATGGTGAACGTGT+TGG | 0.597249 | 3_1:+91193916 | Msa0387300:CDS |
| AGCCCAATTAAGCTCAACTT+GGG | 0.600473 | 3_1:+91191722 | Msa0387300:CDS |
| TCCTTGTACATCTGTTGCAG+GGG | 0.601080 | 3_1:+91195715 | Msa0387300:three_prime_UTR |
| CCCTGTTCTCTTGAATAGCA+GGG | 0.601948 | 3_1:-91192928 | None:intergenic |
| GCCTCACAACATCCAACACA+AGG | 0.602594 | 3_1:-91192386 | None:intergenic |
| ATATATACCTGACATCTGAT+GGG | 0.603581 | 3_1:+91194816 | Msa0387300:CDS |
| TCCCCTGCAACAGATGTACA+AGG | 0.603932 | 3_1:-91195716 | None:intergenic |
| GCATGTGCACATAACCCTAC+TGG | 0.605334 | 3_1:+91193456 | Msa0387300:CDS |
| AACAAACATACACCGAGGAT+AGG | 0.605565 | 3_1:-91191264 | None:intergenic |
| ACCAGATAAGCCTTGAACAG+TGG | 0.611040 | 3_1:-91192954 | None:intergenic |
| GTCAGCGGATGTTTCAAGCA+GGG | 0.615517 | 3_1:+91194212 | Msa0387300:CDS |
| TATTCATGGTGCATCCATTG+TGG | 0.615918 | 3_1:+91194284 | Msa0387300:CDS |
| AGCAAAACAACAGATCCAGA+TGG | 0.618409 | 3_1:-91193429 | None:intergenic |
| GACTATTGAGTTGAAGGCAA+TGG | 0.618768 | 3_1:+91194422 | Msa0387300:CDS |
| CAGAGTTATGCGAAGAACAT+GGG | 0.621421 | 3_1:+91193895 | Msa0387300:CDS |
| ATGGATGCACCATGAATAGG+AGG | 0.622449 | 3_1:-91194279 | None:intergenic |
| TTGGAATGTTTACTTTCACA+GGG | 0.622534 | 3_1:+91194753 | Msa0387300:CDS |
| GCGTTGGATCAACACCAGTA+GGG | 0.625083 | 3_1:-91193470 | None:intergenic |
| TATCATGTACTAGTAGTAGT+CGG | 0.626705 | 3_1:-91190800 | None:intergenic |
| TGTATTGCATCAGCCAGATG+TGG | 0.629141 | 3_1:-91195504 | None:intergenic |
| ATTGTGCAGGAGGATTAGCA+TGG | 0.631015 | 3_1:+91195458 | Msa0387300:intron |
| TCCCCAGGTCAGCAAGTCAG+CGG | 0.637569 | 3_1:+91194197 | Msa0387300:intron |
| ACAAGGAAAGTTCTCTATGG+GGG | 0.640003 | 3_1:-91195699 | None:intergenic |
| GTATTGCATCAGCCAGATGT+GGG | 0.644231 | 3_1:-91195503 | None:intergenic |
| CATGTACTAGTAGTAGTCGG+CGG | 0.644931 | 3_1:-91190797 | None:intergenic |
| GAAGACGGAATCAGAAGAAG+CGG | 0.647565 | 3_1:-91191214 | None:intergenic |
| CCCTTGTGTTGGATGTTGTG+AGG | 0.649198 | 3_1:+91192385 | Msa0387300:CDS |
| CAAGGAAAGTTCTCTATGGG+GGG | 0.649471 | 3_1:-91195698 | None:intergenic |
| GGTAACTGTCGCTTACAACA+AGG | 0.650998 | 3_1:+91191694 | Msa0387300:intron |
| TTGATTCGAGAATAACCGGT+GGG | 0.652226 | 3_1:-91191077 | None:intergenic |
| TACTTGGGGCAATCATACAA+AGG | 0.652701 | 3_1:+91193154 | Msa0387300:CDS |
| CTCACAACATCCAACACAAG+GGG | 0.662888 | 3_1:-91192384 | None:intergenic |
| TGATTGCCCCAAGTAGGTGT+TGG | 0.664181 | 3_1:-91193146 | None:intergenic |
| TACAAGGAAAGTTCTCTATG+GGG | 0.668083 | 3_1:-91195700 | None:intergenic |
| TACTTGCCAACACCTACTTG+GGG | 0.669923 | 3_1:+91193140 | Msa0387300:CDS |
| TGTTGGTGCTTACCGAACTG+AGG | 0.670501 | 3_1:+91191745 | Msa0387300:CDS |
| CACGTGATAACAATAAGAAG+GGG | 0.677453 | 3_1:+91190858 | Msa0387300:five_prime_UTR |
| TTAAATAGGAACCAAAACCA+AGG | 0.677482 | 3_1:+91191024 | Msa0387300:five_prime_UTR |
| ATAATGTGACTCCAATCACC+TGG | 0.679037 | 3_1:-91194722 | None:intergenic |
| CCTCACAACATCCAACACAA+GGG | 0.691571 | 3_1:-91192385 | None:intergenic |
| ACTGGTTCGCTAAGAGTTGG+GGG | 0.694356 | 3_1:+91192977 | Msa0387300:CDS |
| CTACCTGTCCTTGAGAATGG+CGG | 0.699592 | 3_1:-91194307 | None:intergenic |
| GTTGATTCGAGAATAACCGG+TGG | 0.704516 | 3_1:-91191078 | None:intergenic |
| ACTATGCTCCAGCAACACGA+GGG | 0.711939 | 3_1:+91193216 | Msa0387300:CDS |
| CAAAACAACAGATCCAGATG+GGG | 0.713598 | 3_1:-91193427 | None:intergenic |
| ATAGGAGGACTTGAGTACAT+GGG | 0.714033 | 3_1:-91194264 | None:intergenic |
| AGAGAGAAGAACGAAAACCA+AGG | 0.718446 | 3_1:+91190746 | Msa0387300:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAAATTAAATTTAAAT+AGG | + | chr3_1:91191010-91191029 | Msa0387300:five_prime_UTR | 0.0% |
| !!! | TAATTTTAAAATATGTAGAA+AGG | - | chr3_1:91191001-91191020 | None:intergenic | 10.0% |
| !!! | TTTTTTAAATTATTATGCAT+TGG | - | chr3_1:91191862-91191881 | None:intergenic | 10.0% |
| !! | ATGCATAATAATTTAAAAAA+TGG | + | chr3_1:91191862-91191881 | Msa0387300:intron | 10.0% |
| !!! | AATTTTTTTTTTTTTTTTGG+TGG | - | chr3_1:91192859-91192878 | None:intergenic | 10.0% |
| !! | TTAGTTAAAAAAATATAAAG+GGG | - | chr3_1:91193059-91193078 | None:intergenic | 10.0% |
| !!! | AAGAATTTATTTTGTTATTA+AGG | + | chr3_1:91195102-91195121 | Msa0387300:intron | 10.0% |
| !! | AATAGACAAAAAAAAAAAAG+AGG | - | chr3_1:91191650-91191669 | None:intergenic | 15.0% |
| !! | NNNNNNNNNTATAGTGAATC+AGG | - | chr3_1:91192447-91192466 | None:intergenic | 15.0% |
| !!! | ATTAAATGGAGATAATTTTA+TGG | + | chr3_1:91193968-91193987 | Msa0387300:intron | 15.0% |
| !!! | TTAAATGGAGATAATTTTAT+GGG | + | chr3_1:91193969-91193988 | Msa0387300:intron | 15.0% |
| !!! | CATTTTTTTGACAAAAAATA+AGG | + | chr3_1:91195891-91195910 | Msa0387300:three_prime_UTR | 15.0% |
| !!! | TTTTAAAATATGTAGAAAGG+TGG | - | chr3_1:91190998-91191017 | None:intergenic | 20.0% |
| !! | TATTCTATGTATTATTTCCT+TGG | - | chr3_1:91191044-91191063 | None:intergenic | 20.0% |
| !!! | AATCATCAGTAACAAAATTT+TGG | - | chr3_1:91191613-91191632 | None:intergenic | 20.0% |
| !!! | AGGTTAGAATCTTATTTATT+TGG | + | chr3_1:91191765-91191784 | Msa0387300:intron | 20.0% |
| !!! | GGTTAGAATCTTATTTATTT+GGG | + | chr3_1:91191766-91191785 | Msa0387300:intron | 20.0% |
| !!! | TGTTTTCTCATAAACTATTT+TGG | + | chr3_1:91192047-91192066 | Msa0387300:intron | 20.0% |
| !!! | GTTTTCTCATAAACTATTTT+GGG | + | chr3_1:91192048-91192067 | Msa0387300:intron | 20.0% |
| !!! | TTTTCTCATAAACTATTTTG+GGG | + | chr3_1:91192049-91192068 | Msa0387300:intron | 20.0% |
| !! | AATATCACAAATCTTATGTT+AGG | + | chr3_1:91192143-91192162 | Msa0387300:intron | 20.0% |
| !!! | TAATCATCTTTTGCATAATT+TGG | + | chr3_1:91192208-91192227 | Msa0387300:intron | 20.0% |
| !! | TCAATACTCAATAACATAAT+TGG | + | chr3_1:91193340-91193359 | Msa0387300:intron | 20.0% |
| !! | CATAATTGGATTTCATTTAA+TGG | + | chr3_1:91193354-91193373 | Msa0387300:intron | 20.0% |
| !! | TTCAATAAAAGAATATGCAT+TGG | - | chr3_1:91193758-91193777 | None:intergenic | 20.0% |
| !! | TTATTAACAGCAAAAGAAAT+TGG | - | chr3_1:91194967-91194986 | None:intergenic | 20.0% |
| !!! | ATTTATTTTGTTATTAAGGC+TGG | + | chr3_1:91195106-91195125 | Msa0387300:intron | 20.0% |
| !! | TACATACTTTCAAAAATCTT+TGG | - | chr3_1:91195224-91195243 | None:intergenic | 20.0% |
| !! | AAATGAATGATTACACATAA+GGG | - | chr3_1:91195399-91195418 | None:intergenic | 20.0% |
| !! | TAAATGAATGATTACACATA+AGG | - | chr3_1:91195400-91195419 | None:intergenic | 20.0% |
| !! | AGGAATGTATTCTTAATTTA+AGG | + | chr3_1:91195927-91195946 | Msa0387300:three_prime_UTR | 20.0% |
| !! | GGAATGTATTCTTAATTTAA+GGG | + | chr3_1:91195928-91195947 | Msa0387300:three_prime_UTR | 20.0% |
| !! | TATGGAGTAATGAATTTGTT+TGG | - | chr3_1:91190901-91190920 | None:intergenic | 25.0% |
| ! | TTGAAAACTCTCTCTATATA+TGG | - | chr3_1:91190919-91190938 | None:intergenic | 25.0% |
| ! | CAAGAAAGAAAGAAACTTTA+TGG | - | chr3_1:91190944-91190963 | None:intergenic | 25.0% |
| !! | ATGTATTATTTCCTTGGTTT+TGG | - | chr3_1:91191038-91191057 | None:intergenic | 25.0% |
| !! | AATCTTATTTATTTGGGATG+TGG | + | chr3_1:91191772-91191791 | Msa0387300:intron | 25.0% |
| !!! | GTCTTCATTCTGAAATATAT+AGG | + | chr3_1:91191931-91191950 | Msa0387300:intron | 25.0% |
| !! | TGAAATATATAGGCATTGTT+TGG | + | chr3_1:91191941-91191960 | Msa0387300:intron | 25.0% |
| ! | ACTCTTTCTTTACTATCAAA+TGG | - | chr3_1:91192022-91192041 | None:intergenic | 25.0% |
| ! | AAAAGATGATTATGCAGTAT+AGG | - | chr3_1:91192200-91192219 | None:intergenic | 25.0% |
| ! | AGTTATGCATAATTTATGCA+AGG | + | chr3_1:91192822-91192841 | Msa0387300:intron | 25.0% |
| ! | TAATATTGCTGTATATCGTT+GGG | + | chr3_1:91193076-91193095 | Msa0387300:intron | 25.0% |
| ! | TTGATACAAATGCGAAAATA+AGG | - | chr3_1:91193292-91193311 | None:intergenic | 25.0% |
| ! | TATTGATCATGATGCATATT+GGG | - | chr3_1:91193326-91193345 | None:intergenic | 25.0% |
| ! | AAGATTCAAGAGATTAGAAA+TGG | - | chr3_1:91193665-91193684 | None:intergenic | 25.0% |
| !!! | ACATCTATTTTTGTTCAACA+GGG | + | chr3_1:91193793-91193812 | Msa0387300:intron | 25.0% |
| !! | AAGCATTTCAAAGCATTAAA+TGG | + | chr3_1:91193954-91193973 | Msa0387300:intron | 25.0% |
| ! | GGGAAAAAATCATATTGAAT+GGG | - | chr3_1:91194035-91194054 | None:intergenic | 25.0% |
| ! | AGGGAAAAAATCATATTGAA+TGG | - | chr3_1:91194036-91194055 | None:intergenic | 25.0% |
| !! | TTTTTCTACATAAAGAAGCT+TGG | + | chr3_1:91194115-91194134 | Msa0387300:intron | 25.0% |
| ! | ATTGTAGAAAAGGAAAATCA+GGG | - | chr3_1:91194171-91194190 | None:intergenic | 25.0% |
| ! | TATTGTAGAAAAGGAAAATC+AGG | - | chr3_1:91194172-91194191 | None:intergenic | 25.0% |
| ! | CAACTCAAATAAATGTTTCA+TGG | - | chr3_1:91194671-91194690 | None:intergenic | 25.0% |
| ! | TGACTTGATTAAGAGAATAA+TGG | - | chr3_1:91195036-91195055 | None:intergenic | 25.0% |
| !!! | GTTGCATTCTTTTTAGTTTA+AGG | + | chr3_1:91195280-91195299 | Msa0387300:intron | 25.0% |
| ! | ACATTGAAATTTAAGCAACT+CGG | - | chr3_1:91195542-91195561 | None:intergenic | 25.0% |
| ! | ATAAAGGTTTCATTGTTGAT+GGG | - | chr3_1:91195616-91195635 | None:intergenic | 25.0% |
| ! | AATAAAGGTTTCATTGTTGA+TGG | - | chr3_1:91195617-91195636 | None:intergenic | 25.0% |
| !!! | TGATCGTTTTTGACAAATAA+AGG | - | chr3_1:91195632-91195651 | None:intergenic | 25.0% |
| ! | TATTTCCTATGAGAACTTAA+CGG | - | chr3_1:91195745-91195764 | None:intergenic | 25.0% |
| !! | TCAAATCTTTGTATGGTTTT+GGG | + | chr3_1:91195835-91195854 | Msa0387300:three_prime_UTR | 25.0% |
| TATCATGTACTAGTAGTAGT+CGG | - | chr3_1:91190803-91190822 | None:intergenic | 30.0% | |
| ACACGTGATAACAATAAGAA+GGG | + | chr3_1:91190857-91190876 | Msa0387300:five_prime_UTR | 30.0% | |
| ! | GTAATGAATTTGTTTGGTTG+TGG | - | chr3_1:91190895-91190914 | None:intergenic | 30.0% |
| TTAAATAGGAACCAAAACCA+AGG | + | chr3_1:91191024-91191043 | Msa0387300:five_prime_UTR | 30.0% | |
| AGGTGAAGAAGAATAAAAAG+TGG | - | chr3_1:91191106-91191125 | None:intergenic | 30.0% | |
| CGTTAACGATCAAAATCAAA+TGG | + | chr3_1:91191164-91191183 | Msa0387300:CDS | 30.0% | |
| TCTTAATGAGATGACGAAAT+TGG | - | chr3_1:91191364-91191383 | None:intergenic | 30.0% | |
| GATTGAATTTCAAAGCGATA+CGG | + | chr3_1:91191483-91191502 | Msa0387300:intron | 30.0% | |
| TGTGTCTGTGTTTGAAAAAT+AGG | + | chr3_1:91191673-91191692 | Msa0387300:intron | 30.0% | |
| ATAAGATTCTAACCTCAGTT+CGG | - | chr3_1:91191760-91191779 | None:intergenic | 30.0% | |
| GTCATTGAAAATGCATGTTA+AGG | + | chr3_1:91192230-91192249 | Msa0387300:intron | 30.0% | |
| TAAGGAATGATAGATCGATA+AGG | + | chr3_1:91192248-91192267 | Msa0387300:intron | 30.0% | |
| !! | TGACTTGTGAGTTTTACTAA+TGG | + | chr3_1:91192335-91192354 | Msa0387300:intron | 30.0% |
| CTAACATGTCATTCAATAGT+TGG | - | chr3_1:91192422-91192441 | None:intergenic | 30.0% | |
| !! | TTCTGTTCTGCATTGTTTTT+AGG | + | chr3_1:91192611-91192630 | Msa0387300:intron | 30.0% |
| ! | AAGGAGTATATTCCAATTGT+TGG | + | chr3_1:91192643-91192662 | Msa0387300:CDS | 30.0% |
| ! | AGGAGTATATTCCAATTGTT+GGG | + | chr3_1:91192644-91192663 | Msa0387300:CDS | 30.0% |
| !! | TTGAGTGCTAAGCTTATTTT+TGG | + | chr3_1:91192685-91192704 | Msa0387300:CDS | 30.0% |
| ATAAAGGGGATAGAAAGTTA+AGG | - | chr3_1:91193045-91193064 | None:intergenic | 30.0% | |
| CTAATATTGCTGTATATCGT+TGG | + | chr3_1:91193075-91193094 | Msa0387300:intron | 30.0% | |
| ! | TCATACAAAGGTTTTCAACT+TGG | + | chr3_1:91193166-91193185 | Msa0387300:CDS | 30.0% |
| ! | GTATTGATCATGATGCATAT+TGG | - | chr3_1:91193327-91193346 | None:intergenic | 30.0% |
| TTCAAGAGATTAGAAATGGT+TGG | - | chr3_1:91193661-91193680 | None:intergenic | 30.0% | |
| AAGAATATGCATTGGAGATA+TGG | - | chr3_1:91193750-91193769 | None:intergenic | 30.0% | |
| CTGTTGAACAAAAATAGATG+TGG | - | chr3_1:91193794-91193813 | None:intergenic | 30.0% | |
| !!! | CACATCTATTTTTGTTCAAC+AGG | + | chr3_1:91193792-91193811 | Msa0387300:intron | 30.0% |
| ATTGAATGGGATGAAATACA+AGG | - | chr3_1:91194022-91194041 | None:intergenic | 30.0% | |
| CATGATTCAAATCATAAGCA+GGG | - | chr3_1:91194055-91194074 | None:intergenic | 30.0% | |
| ACATGATTCAAATCATAAGC+AGG | - | chr3_1:91194056-91194075 | None:intergenic | 30.0% | |
| ! | TCAAAAACACATGTTACTTG+TGG | - | chr3_1:91194141-91194160 | None:intergenic | 30.0% |
| ! | GTAAAGCATCAAAAAGTTGT+TGG | - | chr3_1:91194470-91194489 | None:intergenic | 30.0% |
| ! | AGAATCTTTTGCAATTCCTT+TGG | + | chr3_1:91194513-91194532 | Msa0387300:intron | 30.0% |
| TGATAAAGAACTGTACAGAA+AGG | - | chr3_1:91194544-91194563 | None:intergenic | 30.0% | |
| TATTTCTCCTGCAATTGAAT+AGG | + | chr3_1:91194695-91194714 | Msa0387300:intron | 30.0% | |
| ATTGGAATGTTTACTTTCAC+AGG | + | chr3_1:91194752-91194771 | Msa0387300:CDS | 30.0% | |
| TTGGAATGTTTACTTTCACA+GGG | + | chr3_1:91194753-91194772 | Msa0387300:CDS | 30.0% | |
| ATATATACCTGACATCTGAT+GGG | + | chr3_1:91194816-91194835 | Msa0387300:CDS | 30.0% | |
| AAAGTATGTACTGTTTGATG+TGG | + | chr3_1:91195234-91195253 | Msa0387300:intron | 30.0% | |
| GAAATATATATCCATGCTGT+AGG | - | chr3_1:91195370-91195389 | None:intergenic | 30.0% | |
| !!! | CATGCATTTTTTTATTGTGC+AGG | + | chr3_1:91195445-91195464 | Msa0387300:intron | 30.0% |
| CATTGAAATTTAAGCAACTC+GGG | - | chr3_1:91195541-91195560 | None:intergenic | 30.0% | |
| ACAAAAAATATCCACCATCA+CGG | - | chr3_1:91195582-91195601 | None:intergenic | 30.0% | |
| AAGAGTCTCAAATCTTTGTA+TGG | + | chr3_1:91195828-91195847 | Msa0387300:three_prime_UTR | 30.0% | |
| ! | CTCAAATCTTTGTATGGTTT+TGG | + | chr3_1:91195834-91195853 | Msa0387300:three_prime_UTR | 30.0% |
| !! | CAAATCTTTGTATGGTTTTG+GGG | + | chr3_1:91195836-91195855 | Msa0387300:three_prime_UTR | 30.0% |
| !!! | AAATCTTTGTATGGTTTTGG+GGG | + | chr3_1:91195837-91195856 | Msa0387300:three_prime_UTR | 30.0% |
| GTTTCCTCTTACAAAAGAAA+AGG | + | chr3_1:91195865-91195884 | Msa0387300:three_prime_UTR | 30.0% | |
| ! | GATACCTTTTCTTTTGTAAG+AGG | - | chr3_1:91195872-91195891 | None:intergenic | 30.0% |
| ! | AATAAGGAATGATTTTGAGC+AGG | + | chr3_1:91195907-91195926 | Msa0387300:three_prime_UTR | 30.0% |
| AATTTAAGGGTTTGACATTG+TGG | + | chr3_1:91195941-91195960 | Msa0387300:three_prime_UTR | 30.0% | |
| ATCTTATCGCATTCTTACCT+TGG | - | chr3_1:91190766-91190785 | None:intergenic | 35.0% | |
| GACACGTGATAACAATAAGA+AGG | + | chr3_1:91190856-91190875 | Msa0387300:five_prime_UTR | 35.0% | |
| CACGTGATAACAATAAGAAG+GGG | + | chr3_1:91190858-91190877 | Msa0387300:five_prime_UTR | 35.0% | |
| ATACTCTCGTGAACTTTATG+CGG | - | chr3_1:91190974-91190993 | None:intergenic | 35.0% | |
| !! | GTTGTTGATTCGAGAATAAC+CGG | - | chr3_1:91191084-91191103 | None:intergenic | 35.0% |
| AAGAAAACAAACATACACCG+AGG | - | chr3_1:91191272-91191291 | None:intergenic | 35.0% | |
| TTATGCAGTATAGGTCTGTT+TGG | - | chr3_1:91192191-91192210 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTGGTGGTGAACCT+CGG | - | chr3_1:91192849-91192868 | None:intergenic | 35.0% |
| AGGGCTATGTTCAAAAAAGT+GGG | - | chr3_1:91192912-91192931 | None:intergenic | 35.0% | |
| AAGATCAAGGCAAACAAACA+CGG | - | chr3_1:91193106-91193125 | None:intergenic | 35.0% | |
| ATAATGCGCTGAAAAGATCA+AGG | - | chr3_1:91193119-91193138 | None:intergenic | 35.0% | |
| ! | TGATAAGCACTGTCAAAGAA+AGG | - | chr3_1:91193546-91193565 | None:intergenic | 35.0% |
| TTTCTTTGACAGTGCTTATC+AGG | + | chr3_1:91193545-91193564 | Msa0387300:CDS | 35.0% | |
| ! | TTTCTACCATAACTTGTGTG+TGG | + | chr3_1:91193599-91193618 | Msa0387300:intron | 35.0% |
| TTATGTCCACACACAAGTTA+TGG | - | chr3_1:91193608-91193627 | None:intergenic | 35.0% | |
| ! | CATGGATTATCCCAAGAAAT+GGG | - | chr3_1:91193695-91193714 | None:intergenic | 35.0% |
| ! | GGTAGAAGTATATTCTTGTG+TGG | - | chr3_1:91193729-91193748 | None:intergenic | 35.0% |
| TGAAATGCTTACAATGCTCA+AGG | - | chr3_1:91193944-91193963 | None:intergenic | 35.0% | |
| ATCTGTAGTGATTAGTGATC+TGG | + | chr3_1:91193996-91194015 | Msa0387300:intron | 35.0% | |
| !! | GGGAGCATTTATTGTAGAAA+AGG | - | chr3_1:91194181-91194200 | None:intergenic | 35.0% |
| ATTGTACAAATCCCTGAAAG+AGG | - | chr3_1:91194397-91194416 | None:intergenic | 35.0% | |
| ATGGTACTCTTTAGTCAAGA+TGG | - | chr3_1:91194798-91194817 | None:intergenic | 35.0% | |
| CATCAGATGTCAGGTATATA+TGG | - | chr3_1:91194817-91194836 | None:intergenic | 35.0% | |
| CATATATACCTGACATCTGA+TGG | + | chr3_1:91194815-91194834 | Msa0387300:CDS | 35.0% | |
| TTCAATTAGTTCAGACGAGT+AGG | + | chr3_1:91194863-91194882 | Msa0387300:intron | 35.0% | |
| AAAGAAATTGGACAACAGCA+TGG | - | chr3_1:91194955-91194974 | None:intergenic | 35.0% | |
| AATGCATGTCTTGAGTTATG+TGG | - | chr3_1:91195433-91195452 | None:intergenic | 35.0% | |
| !!! | GCATTTTTTTATTGTGCAGG+AGG | + | chr3_1:91195448-91195467 | Msa0387300:intron | 35.0% |
| AAAAAATATCCACCATCACG+GGG | - | chr3_1:91195580-91195599 | None:intergenic | 35.0% | |
| CAAAAAATATCCACCATCAC+GGG | - | chr3_1:91195581-91195600 | None:intergenic | 35.0% | |
| TACAAGGAAAGTTCTCTATG+GGG | - | chr3_1:91195703-91195722 | None:intergenic | 35.0% | |
| GTACAAGGAAAGTTCTCTAT+GGG | - | chr3_1:91195704-91195723 | None:intergenic | 35.0% | |
| TGTACAAGGAAAGTTCTCTA+TGG | - | chr3_1:91195705-91195724 | None:intergenic | 35.0% | |
| AGAGAGAAGAACGAAAACCA+AGG | + | chr3_1:91190746-91190765 | Msa0387300:five_prime_UTR | 40.0% | |
| ! | TTGATTCGAGAATAACCGGT+GGG | - | chr3_1:91191080-91191099 | None:intergenic | 40.0% |
| AACAAACATACACCGAGGAT+AGG | - | chr3_1:91191267-91191286 | None:intergenic | 40.0% | |
| AAGTTGAGCTTAATTGGGCT+TGG | - | chr3_1:91191722-91191741 | None:intergenic | 40.0% | |
| AAGCCCAATTAAGCTCAACT+TGG | + | chr3_1:91191721-91191740 | Msa0387300:CDS | 40.0% | |
| AGCCCAATTAAGCTCAACTT+GGG | + | chr3_1:91191722-91191741 | Msa0387300:CDS | 40.0% | |
| ! | CACCCAAGTTGAGCTTAATT+GGG | - | chr3_1:91191727-91191746 | None:intergenic | 40.0% |
| ! | ACACCCAAGTTGAGCTTAAT+TGG | - | chr3_1:91191728-91191747 | None:intergenic | 40.0% |
| ATTAAGCTCAACTTGGGTGT+TGG | + | chr3_1:91191728-91191747 | Msa0387300:CDS | 40.0% | |
| CAAATCACATGTGTCAGTGT+TGG | + | chr3_1:91191898-91191917 | Msa0387300:intron | 40.0% | |
| !!! | TGTTTTTAGGTCACGCAACA+AGG | + | chr3_1:91192624-91192643 | Msa0387300:intron | 40.0% |
| !!! | AGCTTATTTTTGGTGCAGAC+AGG | + | chr3_1:91192695-91192714 | Msa0387300:CDS | 40.0% |
| CATAATTTATGCAAGGTCCG+AGG | + | chr3_1:91192829-91192848 | Msa0387300:intron | 40.0% | |
| AAGTGGGCAAAAGAACAGTT+AGG | - | chr3_1:91192896-91192915 | None:intergenic | 40.0% | |
| CAGGGCTATGTTCAAAAAAG+TGG | - | chr3_1:91192913-91192932 | None:intergenic | 40.0% | |
| TATACTTGCCAACACCTACT+TGG | + | chr3_1:91193138-91193157 | Msa0387300:CDS | 40.0% | |
| ATACTTGCCAACACCTACTT+GGG | + | chr3_1:91193139-91193158 | Msa0387300:CDS | 40.0% | |
| TTTGTATGATTGCCCCAAGT+AGG | - | chr3_1:91193155-91193174 | None:intergenic | 40.0% | |
| TACTTGGGGCAATCATACAA+AGG | + | chr3_1:91193154-91193173 | Msa0387300:CDS | 40.0% | |
| ! | ACAAAGGTTTTCAACTTGGC+AGG | + | chr3_1:91193170-91193189 | Msa0387300:CDS | 40.0% |
| AAGAAGTCCTGTAAGGAACA+AGG | - | chr3_1:91193391-91193410 | None:intergenic | 40.0% | |
| CAAAACAACAGATCCAGATG+GGG | - | chr3_1:91193430-91193449 | None:intergenic | 40.0% | |
| GCAAAACAACAGATCCAGAT+GGG | - | chr3_1:91193431-91193450 | None:intergenic | 40.0% | |
| AGCAAAACAACAGATCCAGA+TGG | - | chr3_1:91193432-91193451 | None:intergenic | 40.0% | |
| TTGATCCAACGCTTGAACAA+TGG | + | chr3_1:91193481-91193500 | Msa0387300:CDS | 40.0% | |
| TGATCCAACGCTTGAACAAT+GGG | + | chr3_1:91193482-91193501 | Msa0387300:CDS | 40.0% | |
| TCTTGAAGCTTCCCATTTCT+TGG | + | chr3_1:91193681-91193700 | Msa0387300:intron | 40.0% | |
| CTTGAAGCTTCCCATTTCTT+GGG | + | chr3_1:91193682-91193701 | Msa0387300:intron | 40.0% | |
| ! | CCATGGATTATCCCAAGAAA+TGG | - | chr3_1:91193696-91193715 | None:intergenic | 40.0% |
| CCATTTCTTGGGATAATCCA+TGG | + | chr3_1:91193693-91193712 | Msa0387300:intron | 40.0% | |
| TGTGTGGACATTATTCACCA+TGG | - | chr3_1:91193713-91193732 | None:intergenic | 40.0% | |
| TCAGCAACAAACAAACGAAC+AGG | - | chr3_1:91193853-91193872 | None:intergenic | 40.0% | |
| ! | GTTCGTTTGTTTGTTGCTGA+TGG | + | chr3_1:91193853-91193872 | Msa0387300:CDS | 40.0% |
| CATGTTCTTCGCATAACTCT+GGG | - | chr3_1:91193896-91193915 | None:intergenic | 40.0% | |
| CAGAGTTATGCGAAGAACAT+GGG | + | chr3_1:91193895-91193914 | Msa0387300:CDS | 40.0% | |
| TTCTACAATAAATGCTCCCC+AGG | + | chr3_1:91194182-91194201 | Msa0387300:intron | 40.0% | |
| GCCAACTGAAACTTGTGATT+AGG | + | chr3_1:91194241-91194260 | Msa0387300:CDS | 40.0% | |
| GCCTAATCACAAGTTTCAGT+TGG | - | chr3_1:91194245-91194264 | None:intergenic | 40.0% | |
| ATAGGAGGACTTGAGTACAT+GGG | - | chr3_1:91194267-91194286 | None:intergenic | 40.0% | |
| AATAGGAGGACTTGAGTACA+TGG | - | chr3_1:91194268-91194287 | None:intergenic | 40.0% | |
| TACTCAAGTCCTCCTATTCA+TGG | + | chr3_1:91194270-91194289 | Msa0387300:CDS | 40.0% | |
| ACAATGGATGCACCATGAAT+AGG | - | chr3_1:91194285-91194304 | None:intergenic | 40.0% | |
| TATTCATGGTGCATCCATTG+TGG | + | chr3_1:91194284-91194303 | Msa0387300:CDS | 40.0% | |
| CAATATACTTCTGCTTCCCT+TGG | + | chr3_1:91194335-91194354 | Msa0387300:intron | 40.0% | |
| !!! | ACTTGTTTTGCTCCTCTTTC+AGG | + | chr3_1:91194382-91194401 | Msa0387300:intron | 40.0% |
| !!! | CTTGTTTTGCTCCTCTTTCA+GGG | + | chr3_1:91194383-91194402 | Msa0387300:intron | 40.0% |
| TCAGGGATTTGTACAATGAC+TGG | + | chr3_1:91194400-91194419 | Msa0387300:intron | 40.0% | |
| !! | TGACTGGACTATTGAGTTGA+AGG | + | chr3_1:91194416-91194435 | Msa0387300:CDS | 40.0% |
| !! | GACTATTGAGTTGAAGGCAA+TGG | + | chr3_1:91194422-91194441 | Msa0387300:CDS | 40.0% |
| TTTGATGCTTTACGTGCTAG+AGG | + | chr3_1:91194477-91194496 | Msa0387300:CDS | 40.0% | |
| AATCCTTGAAAGATTCTCGC+AGG | - | chr3_1:91194642-91194661 | None:intergenic | 40.0% | |
| TGGTGTACCTATTCAATTGC+AGG | - | chr3_1:91194705-91194724 | None:intergenic | 40.0% | |
| TGCAATTGAATAGGTACACC+AGG | + | chr3_1:91194704-91194723 | Msa0387300:intron | 40.0% | |
| GTTCCAGTTAAGTGTGAACA+TGG | + | chr3_1:91194912-91194931 | Msa0387300:intron | 40.0% | |
| AGTTGCAATGTGCAACATGT+TGG | + | chr3_1:91194993-91195012 | Msa0387300:intron | 40.0% | |
| GTTGCAATGTGCAACATGTT+GGG | + | chr3_1:91194994-91195013 | Msa0387300:intron | 40.0% | |
| TTGCAATGTGCAACATGTTG+GGG | + | chr3_1:91194995-91195014 | Msa0387300:intron | 40.0% | |
| TATGAGAGATGATGCTGTCT+CGG | + | chr3_1:91195305-91195324 | Msa0387300:intron | 40.0% | |
| GTTTATCTCTACCTACAGCA+TGG | + | chr3_1:91195356-91195375 | Msa0387300:intron | 40.0% | |
| TTATCAATTCATCCCCGTGA+TGG | + | chr3_1:91195565-91195584 | Msa0387300:three_prime_UTR | 40.0% | |
| ACAAGGAAAGTTCTCTATGG+GGG | - | chr3_1:91195702-91195721 | None:intergenic | 40.0% | |
| TTTCCTTGTACATCTGTTGC+AGG | + | chr3_1:91195713-91195732 | Msa0387300:three_prime_UTR | 40.0% | |
| TTCCTTGTACATCTGTTGCA+GGG | + | chr3_1:91195714-91195733 | Msa0387300:three_prime_UTR | 40.0% | |
| AGAAAAAACGACTCTGTCGT+AGG | + | chr3_1:91195772-91195791 | Msa0387300:three_prime_UTR | 40.0% | |
| ATGTACTAGTAGTAGTCGGC+GGG | - | chr3_1:91190799-91190818 | None:intergenic | 45.0% | |
| CATGTACTAGTAGTAGTCGG+CGG | - | chr3_1:91190800-91190819 | None:intergenic | 45.0% | |
| !! | GTTGATTCGAGAATAACCGG+TGG | - | chr3_1:91191081-91191100 | None:intergenic | 45.0% |
| ATTCTTCTTCACCTGATCGC+AGG | + | chr3_1:91191112-91191131 | Msa0387300:CDS | 45.0% | |
| ATAGTGTTTAGCCTGCGATC+AGG | - | chr3_1:91191126-91191145 | None:intergenic | 45.0% | |
| GAAGACGGAATCAGAAGAAG+CGG | - | chr3_1:91191217-91191236 | None:intergenic | 45.0% | |
| ! | GGTAACTGTCGCTTACAACA+AGG | + | chr3_1:91191694-91191713 | Msa0387300:intron | 45.0% |
| AATGGCCTGTGATACTTACC+AGG | + | chr3_1:91192353-91192372 | Msa0387300:intron | 45.0% | |
| ACCTTCCTGGTAAGTATCAC+AGG | - | chr3_1:91192361-91192380 | None:intergenic | 45.0% | |
| CTCACAACATCCAACACAAG+GGG | - | chr3_1:91192387-91192406 | None:intergenic | 45.0% | |
| CCTCACAACATCCAACACAA+GGG | - | chr3_1:91192388-91192407 | None:intergenic | 45.0% | |
| AAATCAGCGAGCCCAACAAT+TGG | - | chr3_1:91192658-91192677 | None:intergenic | 45.0% | |
| ATAACTGAGCTAAGCTCACG+GGG | - | chr3_1:91192808-91192827 | None:intergenic | 45.0% | |
| CATAACTGAGCTAAGCTCAC+GGG | - | chr3_1:91192809-91192828 | None:intergenic | 45.0% | |
| GCATAACTGAGCTAAGCTCA+CGG | - | chr3_1:91192810-91192829 | None:intergenic | 45.0% | |
| CCCTGTTCTCTTGAATAGCA+GGG | - | chr3_1:91192931-91192950 | None:intergenic | 45.0% | |
| CCCTGCTATTCAAGAGAACA+GGG | + | chr3_1:91192928-91192947 | Msa0387300:CDS | 45.0% | |
| ACCCTGTTCTCTTGAATAGC+AGG | - | chr3_1:91192932-91192951 | None:intergenic | 45.0% | |
| AACAGGGTTACCACTGTTCA+AGG | + | chr3_1:91192944-91192963 | Msa0387300:CDS | 45.0% | |
| ACCACTGTTCAAGGCTTATC+TGG | + | chr3_1:91192953-91192972 | Msa0387300:CDS | 45.0% | |
| ACCAGATAAGCCTTGAACAG+TGG | - | chr3_1:91192957-91192976 | None:intergenic | 45.0% | |
| GTTCAAGGCTTATCTGGTAC+TGG | + | chr3_1:91192959-91192978 | Msa0387300:CDS | 45.0% | |
| !! | GTACTGGTTCGCTAAGAGTT+GGG | + | chr3_1:91192975-91192994 | Msa0387300:CDS | 45.0% |
| !! | TACTGGTTCGCTAAGAGTTG+GGG | + | chr3_1:91192976-91192995 | Msa0387300:CDS | 45.0% |
| TACTTGCCAACACCTACTTG+GGG | + | chr3_1:91193140-91193159 | Msa0387300:CDS | 45.0% | |
| AGTCCTGTAAGGAACAAGGA+GGG | - | chr3_1:91193387-91193406 | None:intergenic | 45.0% | |
| AAGTCCTGTAAGGAACAAGG+AGG | - | chr3_1:91193388-91193407 | None:intergenic | 45.0% | |
| GTTCCTTACAGGACTTCTTG+AGG | + | chr3_1:91193392-91193411 | Msa0387300:intron | 45.0% | |
| GATCCTCAAGAAGTCCTGTA+AGG | - | chr3_1:91193398-91193417 | None:intergenic | 45.0% | |
| ACAGGACTTCTTGAGGATCT+TGG | + | chr3_1:91193399-91193418 | Msa0387300:intron | 45.0% | |
| ATCTGCATCTAGACTTCCAC+TGG | - | chr3_1:91193824-91193843 | None:intergenic | 45.0% | |
| ! | CGTTTGTTTGTTGCTGATGG+TGG | + | chr3_1:91193856-91193875 | Msa0387300:CDS | 45.0% |
| CCATGTTCTTCGCATAACTC+TGG | - | chr3_1:91193897-91193916 | None:intergenic | 45.0% | |
| CCAGAGTTATGCGAAGAACA+TGG | + | chr3_1:91193894-91193913 | Msa0387300:CDS | 45.0% | |
| GCGAAGAACATGGGTCTTTA+TGG | + | chr3_1:91193904-91193923 | Msa0387300:CDS | 45.0% | |
| GGTCTTTATGGTGAACGTGT+TGG | + | chr3_1:91193916-91193935 | Msa0387300:CDS | 45.0% | |
| ATGGATGCACCATGAATAGG+AGG | - | chr3_1:91194282-91194301 | None:intergenic | 45.0% | |
| TCACTACCTGTCCTTGAGAA+TGG | - | chr3_1:91194313-91194332 | None:intergenic | 45.0% | |
| ATATGTCCAAGTCCAGCCAA+GGG | - | chr3_1:91194354-91194373 | None:intergenic | 45.0% | |
| ATGCTTTACGTGCTAGAGGT+TGG | + | chr3_1:91194481-91194500 | Msa0387300:intron | 45.0% | |
| GTACAGAAAGGACAAGCCAA+AGG | - | chr3_1:91194532-91194551 | None:intergenic | 45.0% | |
| TCTCCTGCGAGAATCTTTCA+AGG | + | chr3_1:91194636-91194655 | Msa0387300:intron | 45.0% | |
| GAATAGGTACACCAGGTGAT+TGG | + | chr3_1:91194711-91194730 | Msa0387300:intron | 45.0% | |
| ! | GTCAAGATGGAAACTTGCTC+AGG | - | chr3_1:91194785-91194804 | None:intergenic | 45.0% |
| TGTCTTACCCATCAGATGTC+AGG | - | chr3_1:91194826-91194845 | None:intergenic | 45.0% | |
| GCACCATGTTCACACTTAAC+TGG | - | chr3_1:91194918-91194937 | None:intergenic | 45.0% | |
| TGCAATGTGCAACATGTTGG+GGG | + | chr3_1:91194996-91195015 | Msa0387300:intron | 45.0% | |
| ! | ATTGTGCAGGAGGATTAGCA+TGG | + | chr3_1:91195458-91195477 | Msa0387300:intron | 45.0% |
| GTATTGCATCAGCCAGATGT+GGG | - | chr3_1:91195506-91195525 | None:intergenic | 45.0% | |
| TGTATTGCATCAGCCAGATG+TGG | - | chr3_1:91195507-91195526 | None:intergenic | 45.0% | |
| CAAGGAAAGTTCTCTATGGG+GGG | - | chr3_1:91195701-91195720 | None:intergenic | 45.0% | |
| TCCTTGTACATCTGTTGCAG+GGG | + | chr3_1:91195715-91195734 | Msa0387300:three_prime_UTR | 45.0% | |
| GAGAGCCGTTAAGTTCTCAT+AGG | + | chr3_1:91195737-91195756 | Msa0387300:three_prime_UTR | 45.0% | |
| AACGACTCTGTCGTAGGATT+TGG | + | chr3_1:91195778-91195797 | Msa0387300:three_prime_UTR | 45.0% | |
| !!! | AAGAATTTTTTTTTTTTTTT+TGG | - | chr3_1:91192862-91192881 | None:intergenic | 5.0% |
| !! | ATTAGTTAAAAAAATATAAA+GGG | - | chr3_1:91193060-91193079 | None:intergenic | 5.0% |
| !! | TATTAGTTAAAAAAATATAA+AGG | - | chr3_1:91193061-91193080 | None:intergenic | 5.0% |
| TATATACAGCATGCGCCCAC+CGG | + | chr3_1:91191062-91191081 | Msa0387300:exon | 50.0% | |
| TCAGAAGAAGCGGTTGGAGA+AGG | - | chr3_1:91191207-91191226 | None:intergenic | 50.0% | |
| ACGGAATCAGAAGAAGCGGT+TGG | - | chr3_1:91191213-91191232 | None:intergenic | 50.0% | |
| ACGAACGAGATGAGCGAAGA+CGG | - | chr3_1:91191232-91191251 | None:intergenic | 50.0% | |
| GCTCCTGAAGATCCTATCCT+CGG | + | chr3_1:91191252-91191271 | Msa0387300:CDS | 50.0% | |
| ACACCGAGGATAGGATCTTC+AGG | - | chr3_1:91191258-91191277 | None:intergenic | 50.0% | |
| ! | CGATACGGTTCTGATGCTGA+TGG | + | chr3_1:91191498-91191517 | Msa0387300:intron | 50.0% |
| ! | TGTTGGTGCTTACCGAACTG+AGG | + | chr3_1:91191745-91191764 | Msa0387300:CDS | 50.0% |
| GCCTGTGATACTTACCAGGA+AGG | + | chr3_1:91192357-91192376 | Msa0387300:intron | 50.0% | |
| ACACAAGGGGTTTACCTTCC+TGG | - | chr3_1:91192374-91192393 | None:intergenic | 50.0% | |
| GGAAGGTAAACCCCTTGTGT+TGG | + | chr3_1:91192374-91192393 | Msa0387300:intron | 50.0% | |
| CCCTTGTGTTGGATGTTGTG+AGG | + | chr3_1:91192385-91192404 | Msa0387300:CDS | 50.0% | |
| GCCTCACAACATCCAACACA+AGG | - | chr3_1:91192389-91192408 | None:intergenic | 50.0% | |
| GCCCTGCTATTCAAGAGAAC+AGG | + | chr3_1:91192927-91192946 | Msa0387300:intron | 50.0% | |
| !! | GGTACTGGTTCGCTAAGAGT+TGG | + | chr3_1:91192974-91192993 | Msa0387300:CDS | 50.0% |
| !! | ACTGGTTCGCTAAGAGTTGG+GGG | + | chr3_1:91192977-91192996 | Msa0387300:CDS | 50.0% |
| TGATTGCCCCAAGTAGGTGT+TGG | - | chr3_1:91193149-91193168 | None:intergenic | 50.0% | |
| TACTATGCTCCAGCAACACG+AGG | + | chr3_1:91193215-91193234 | Msa0387300:CDS | 50.0% | |
| ACTATGCTCCAGCAACACGA+GGG | + | chr3_1:91193216-91193235 | Msa0387300:CDS | 50.0% | |
| ACACGAGGGCTTGACTTTCA+AGG | + | chr3_1:91193230-91193249 | Msa0387300:CDS | 50.0% | |
| TCCTGTAAGGAACAAGGAGG+GGG | - | chr3_1:91193385-91193404 | None:intergenic | 50.0% | |
| GTCCTGTAAGGAACAAGGAG+GGG | - | chr3_1:91193386-91193405 | None:intergenic | 50.0% | |
| GCATGTGCACATAACCCTAC+TGG | + | chr3_1:91193456-91193475 | Msa0387300:CDS | 50.0% | |
| GCGTTGGATCAACACCAGTA+GGG | - | chr3_1:91193473-91193492 | None:intergenic | 50.0% | |
| ! | AGCGTTGGATCAACACCAGT+AGG | - | chr3_1:91193474-91193493 | None:intergenic | 50.0% |
| TGCTCCCATTGTTCAAGCGT+TGG | - | chr3_1:91193489-91193508 | None:intergenic | 50.0% | |
| ! | GTTCAACAGGGTTTTGCCAG+TGG | + | chr3_1:91193805-91193824 | Msa0387300:intron | 50.0% |
| !! | TGCTGATGGTGGAGAATTGC+TGG | + | chr3_1:91193867-91193886 | Msa0387300:CDS | 50.0% |
| AGTCAGCGGATGTTTCAAGC+AGG | + | chr3_1:91194211-91194230 | Msa0387300:CDS | 50.0% | |
| GTCAGCGGATGTTTCAAGCA+GGG | + | chr3_1:91194212-91194231 | Msa0387300:CDS | 50.0% | |
| CTACCTGTCCTTGAGAATGG+CGG | - | chr3_1:91194310-91194329 | None:intergenic | 50.0% | |
| ATACTTCTGCTTCCCTTGGC+TGG | + | chr3_1:91194339-91194358 | Msa0387300:intron | 50.0% | |
| CATATGTCCAAGTCCAGCCA+AGG | - | chr3_1:91194355-91194374 | None:intergenic | 50.0% | |
| CAGCATGGTACGCAAGCTAT+AGG | - | chr3_1:91194940-91194959 | None:intergenic | 50.0% | |
| CTCCAAAACAGTCCCACATC+TGG | + | chr3_1:91195491-91195510 | Msa0387300:CDS | 50.0% | |
| ! | AGCCAGATGTGGGACTGTTT+TGG | - | chr3_1:91195496-91195515 | None:intergenic | 50.0% |
| TCAATTCATCCCCGTGATGG+TGG | + | chr3_1:91195568-91195587 | Msa0387300:three_prime_UTR | 50.0% | |
| GAAAGTTCTCTATGGGGGGA+AGG | - | chr3_1:91195697-91195716 | None:intergenic | 50.0% | |
| TCCCCTGCAACAGATGTACA+AGG | - | chr3_1:91195719-91195738 | None:intergenic | 50.0% | |
| AAGTCAAGCCCTCGTGTTGC+TGG | - | chr3_1:91193227-91193246 | None:intergenic | 55.0% | |
| TCCCCCTCCTTGTTCCTTAC+AGG | + | chr3_1:91193381-91193400 | Msa0387300:intron | 55.0% | |
| !! | GATCTTGGTTCTGCCCCATC+TGG | + | chr3_1:91193414-91193433 | Msa0387300:CDS | 55.0% |
| !! | ATCCGCTGACTTGCTGACCT+GGG | - | chr3_1:91194202-91194221 | None:intergenic | 55.0% |
| CTTGAGAATGGCGGCCACAA+TGG | - | chr3_1:91194301-91194320 | None:intergenic | 55.0% | |
| CATTGTGGCCGCCATTCTCA+AGG | + | chr3_1:91194299-91194318 | Msa0387300:CDS | 55.0% | |
| ! | TGCAGGAGGATTAGCATGGC+TGG | + | chr3_1:91195462-91195481 | Msa0387300:intron | 55.0% |
| TCCCCAGGTCAGCAAGTCAG+CGG | + | chr3_1:91194197-91194216 | Msa0387300:intron | 60.0% | |
| !! | TCCGCTGACTTGCTGACCTG+GGG | - | chr3_1:91194201-91194220 | None:intergenic | 60.0% |
| !! | CATCCGCTGACTTGCTGACC+TGG | - | chr3_1:91194203-91194222 | None:intergenic | 60.0% |
| TGGCCGCCATTCTCAAGGAC+AGG | + | chr3_1:91194304-91194323 | Msa0387300:CDS | 60.0% | |
| CTGCTTCCCTTGGCTGGACT+TGG | + | chr3_1:91194345-91194364 | Msa0387300:intron | 60.0% | |
| !! | CTCTATGGGGGGAAGGCATC+AGG | - | chr3_1:91195690-91195709 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 91190741 | 91195989 | 91190741 | ID=Msa0387300;Name=Msa0387300 |
| chr3_1 | mRNA | 91190741 | 91195989 | 91190741 | ID=Msa0387300-mRNA-1;Parent=Msa0387300;Name=Msa0387300-mRNA-1;_AED=0.06;_eAED=0.06;_QI=331|1|1|1|1|1|12|438|455 |
| chr3_1 | exon | 91190741 | 91191275 | 91190741 | ID=Msa0387300-mRNA-1:exon:25375;Parent=Msa0387300-mRNA-1 |
| chr3_1 | exon | 91191695 | 91191766 | 91191695 | ID=Msa0387300-mRNA-1:exon:25376;Parent=Msa0387300-mRNA-1 |
| chr3_1 | exon | 91192375 | 91192436 | 91192375 | ID=Msa0387300-mRNA-1:exon:25377;Parent=Msa0387300-mRNA-1 |
| chr3_1 | exon | 91192633 | 91192716 | 91192633 | ID=Msa0387300-mRNA-1:exon:25378;Parent=Msa0387300-mRNA-1 |
| chr3_1 | exon | 91192928 | 91193027 | 91192928 | ID=Msa0387300-mRNA-1:exon:25379;Parent=Msa0387300-mRNA-1 |
| chr3_1 | exon | 91193131 | 91193251 | 91193131 | ID=Msa0387300-mRNA-1:exon:25380;Parent=Msa0387300-mRNA-1 |
| chr3_1 | exon | 91193403 | 91193566 | 91193403 | ID=Msa0387300-mRNA-1:exon:25381;Parent=Msa0387300-mRNA-1 |
| chr3_1 | exon | 91193814 | 91193951 | 91193814 | ID=Msa0387300-mRNA-1:exon:25382;Parent=Msa0387300-mRNA-1 |
| chr3_1 | exon | 91194204 | 91194325 | 91194204 | ID=Msa0387300-mRNA-1:exon:25383;Parent=Msa0387300-mRNA-1 |
| chr3_1 | exon | 91194404 | 91194498 | 91194404 | ID=Msa0387300-mRNA-1:exon:25384;Parent=Msa0387300-mRNA-1 |
| chr3_1 | exon | 91194717 | 91194837 | 91194717 | ID=Msa0387300-mRNA-1:exon:25385;Parent=Msa0387300-mRNA-1 |
| chr3_1 | exon | 91195467 | 91195989 | 91195467 | ID=Msa0387300-mRNA-1:exon:25386;Parent=Msa0387300-mRNA-1 |
| chr3_1 | five_prime_UTR | 91190741 | 91191071 | 91190741 | ID=Msa0387300-mRNA-1:five_prime_utr;Parent=Msa0387300-mRNA-1 |
| chr3_1 | CDS | 91191072 | 91191275 | 91191072 | ID=Msa0387300-mRNA-1:cds;Parent=Msa0387300-mRNA-1 |
| chr3_1 | CDS | 91191695 | 91191766 | 91191695 | ID=Msa0387300-mRNA-1:cds;Parent=Msa0387300-mRNA-1 |
| chr3_1 | CDS | 91192375 | 91192436 | 91192375 | ID=Msa0387300-mRNA-1:cds;Parent=Msa0387300-mRNA-1 |
| chr3_1 | CDS | 91192633 | 91192716 | 91192633 | ID=Msa0387300-mRNA-1:cds;Parent=Msa0387300-mRNA-1 |
| chr3_1 | CDS | 91192928 | 91193027 | 91192928 | ID=Msa0387300-mRNA-1:cds;Parent=Msa0387300-mRNA-1 |
| chr3_1 | CDS | 91193131 | 91193251 | 91193131 | ID=Msa0387300-mRNA-1:cds;Parent=Msa0387300-mRNA-1 |
| chr3_1 | CDS | 91193403 | 91193566 | 91193403 | ID=Msa0387300-mRNA-1:cds;Parent=Msa0387300-mRNA-1 |
| chr3_1 | CDS | 91193814 | 91193951 | 91193814 | ID=Msa0387300-mRNA-1:cds;Parent=Msa0387300-mRNA-1 |
| chr3_1 | CDS | 91194204 | 91194325 | 91194204 | ID=Msa0387300-mRNA-1:cds;Parent=Msa0387300-mRNA-1 |
| chr3_1 | CDS | 91194404 | 91194498 | 91194404 | ID=Msa0387300-mRNA-1:cds;Parent=Msa0387300-mRNA-1 |
| chr3_1 | CDS | 91194717 | 91194837 | 91194717 | ID=Msa0387300-mRNA-1:cds;Parent=Msa0387300-mRNA-1 |
| chr3_1 | CDS | 91195467 | 91195551 | 91195467 | ID=Msa0387300-mRNA-1:cds;Parent=Msa0387300-mRNA-1 |
| chr3_1 | three_prime_UTR | 91195552 | 91195989 | 91195552 | ID=Msa0387300-mRNA-1:three_prime_utr;Parent=Msa0387300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
