AlfalfaGEDB | Msa1039650

M. sativa cultivar zhongmu-4 / Msa1039650

KEGG: K08726
GO: GO:0000287 GO:0001676 GO:0003008 GO:0003013 GO:0003018 GO:0003674 GO:0003824 GO:0004301 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005782 GO:0005829 GO:0006082 GO:0006605 GO:0006625 GO:0006629 GO:0006631 GO:0006633 GO:0006690 GO:0006725 GO:0006793 GO:0006796 GO:0006805 GO:0006810 GO:0006873 GO:0006874 GO:0006875 GO:0006886 GO:0006950 GO:0006952 GO:0006954 GO:0006996 GO:0007031 GO:0008015 GO:0008104 GO:0008150 GO:0008152 GO:0008217 GO:0008610 GO:0009056 GO:0009058 GO:0009410 GO:0009636 GO:0009810 GO:0009893 GO:0009987 GO:0010468 GO:0010604 GO:0010628 GO:0015031 GO:0015643 GO:0015833 GO:0016043 GO:0016053 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0016801 GO:0016803 GO:0017144 GO:0018904 GO:0019216 GO:0019218 GO:0019222 GO:0019369 GO:0019373 GO:0019439 GO:0019725 GO:0019752 GO:0030003 GO:0030258 GO:0031907 GO:0031974 GO:0032501 GO:0032787 GO:0033036 GO:0033365 GO:0033559 GO:0034613 GO:0035150 GO:0035296 GO:0042221 GO:0042577 GO:0042578 GO:0042579 GO:0042592 GO:0042632 GO:0042759 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043574 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046272 GO:0046394 GO:0046483 GO:0046839 GO:0046872 GO:0046907 GO:0046983 GO:0048518 GO:0048878 GO:0050789 GO:0050801 GO:0050880 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055088 GO:0055092 GO:0060255 GO:0062012 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0070887 GO:0071466 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072330 GO:0072503 GO:0072507 GO:0072593 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0090066 GO:0090181 GO:0097176 GO:0097746 GO:0097755 GO:0098771 GO:1900673 GO:1901360 GO:1901361 GO:1901568 GO:1901575 GO:1901576
PFAM: PF00561.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1039650	XP_003626244.1	97.179	319	9	0	1	319	1	319	0.0	649

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1039650	sp\|I6YGS0\|EPHA_MYCTU	34.146	328	192	8	1	316	1	316	3.28e-62	203

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1039650	A2Q321	97.179	319	9	0	1	319	1	319	0.0	649

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000180	Msa1039650	-0.830899	2.263873e-55	-8.615850e-47
Msa0000610	Msa1039650	-0.809452	1.879142e-50	-8.615850e-47
Msa0029010	Msa1039650	0.831325	1.779864e-55	-8.615850e-47
Msa0037720	Msa1039650	0.811318	7.434130e-51	-8.615850e-47
Msa0060740	Msa1039650	-0.802373	5.786956e-49	-8.615850e-47
Msa0077920	Msa1039650	-0.809327	1.998539e-50	-8.615850e-47
Msa0605020	Msa1039650	0.844787	6.089609e-59	-8.615850e-47
Msa0617470	Msa1039650	-0.802566	5.279681e-49	-8.615850e-47
Msa0619460	Msa1039650	-0.806766	7.015212e-50	-8.615850e-47
Msa0622070	Msa1039650	0.838350	3.030686e-57	-8.615850e-47
Msa0625310	Msa1039650	-0.801227	9.945294e-49	-8.615850e-47
Msa0638820	Msa1039650	0.807443	5.041858e-50	-8.615850e-47
Msa0639880	Msa1039650	-0.805017	1.635537e-49	-8.615850e-47
Msa0646670	Msa1039650	0.840748	7.214315e-58	-8.615850e-47
Msa0659590	Msa1039650	-0.804469	2.128326e-49	-8.615850e-47
Msa0667240	Msa1039650	0.807570	4.739555e-50	-8.615850e-47
Msa0697520	Msa1039650	0.804693	1.911208e-49	-8.615850e-47
Msa0700250	Msa1039650	-0.808513	2.984934e-50	-8.615850e-47
Msa0747500	Msa1039650	0.803063	4.168704e-49	-8.615850e-47
Msa0749500	Msa1039650	0.849705	2.724168e-60	-8.615850e-47
Msa0749510	Msa1039650	0.852917	3.368998e-61	-8.615850e-47
Msa0793910	Msa1039650	0.831246	1.860758e-55	-8.615850e-47
Msa0826360	Msa1039650	0.806375	8.482401e-50	-8.615850e-47
Msa0831430	Msa1039650	0.850598	1.530839e-60	-8.615850e-47
Msa0125810	Msa1039650	-0.810449	1.146459e-50	-8.615850e-47
Msa0151810	Msa1039650	-0.831821	1.343497e-55	-8.615850e-47
Msa0169050	Msa1039650	0.842960	1.878748e-58	-8.615850e-47
Msa0192890	Msa1039650	0.812726	3.667332e-51	-8.615850e-47
Msa0194370	Msa1039650	-0.808235	3.421300e-50	-8.615850e-47
Msa0224210	Msa1039650	0.808993	2.357042e-50	-8.615850e-47
Msa0231850	Msa1039650	0.802799	4.726804e-49	-8.615850e-47
Msa0235020	Msa1039650	0.805912	1.061386e-49	-8.615850e-47
Msa0368620	Msa1039650	0.815135	1.079676e-51	-8.615850e-47
Msa0381470	Msa1039650	0.809316	2.009253e-50	-8.615850e-47
Msa0387300	Msa1039650	0.815541	8.767225e-52	-8.615850e-47
Msa0389570	Msa1039650	-0.809376	1.951241e-50	-8.615850e-47
Msa0389710	Msa1039650	0.815656	8.267980e-52	-8.615850e-47
Msa0390790	Msa1039650	0.802998	4.298355e-49	-8.615850e-47
Msa0416040	Msa1039650	0.815820	7.600546e-52	-8.615850e-47
Msa0434140	Msa1039650	0.805560	1.258736e-49	-8.615850e-47
Msa0455830	Msa1039650	0.856133	3.953216e-62	-8.615850e-47
Msa0466850	Msa1039650	0.801372	9.288965e-49	-8.615850e-47
Msa0477660	Msa1039650	0.818654	1.750901e-52	-8.615850e-47
Msa0480260	Msa1039650	0.816727	4.764905e-52	-8.615850e-47
Msa0986160	Msa1039650	0.861959	7.108811e-64	-8.615850e-47
Msa0998900	Msa1039650	-0.804322	2.283570e-49	-8.615850e-47
Msa1024120	Msa1039650	-0.820331	7.256597e-53	-8.615850e-47
Msa1039650	Msa1081650	-0.805462	1.319672e-49	-8.615850e-47
Msa1039650	Msa1107950	-0.817763	2.786314e-52	-8.615850e-47
Msa1039650	Msa1112040	0.800086	1.699721e-48	-8.615850e-47
Msa1039650	Msa1174450	0.803600	3.225795e-49	-8.615850e-47
Msa1039650	Msa1177360	-0.817256	3.623561e-52	-8.615850e-47
Msa1039650	Msa1192790	-0.831489	1.621351e-55	-8.615850e-47
Msa1039650	Msa1236740	-0.817759	2.792009e-52	-8.615850e-47
Msa1039650	Msa1304980	0.858202	9.682486e-63	-8.615850e-47
Msa1039650	Msa1314810	0.806789	6.935868e-50	-8.615850e-47
Msa1039650	Msa1327400	-0.832728	8.012002e-56	-8.615850e-47
Msa1039650	Msa1327420	-0.830444	2.927428e-55	-8.615850e-47
Msa1039650	Msa1344870	-0.811776	5.910666e-51	-8.615850e-47
Msa1039650	Msa1437650	-0.800286	1.547740e-48	-8.615850e-47
Msa0273420	Msa1039650	0.807329	5.332113e-50	-8.615850e-47
Msa0275570	Msa1039650	0.804014	2.647144e-49	-8.615850e-47
Msa0291920	Msa1039650	0.825785	3.878991e-54	-8.615850e-47
Msa0313680	Msa1039650	0.808019	3.804527e-50	-8.615850e-47
Msa0315010	Msa1039650	-0.801157	1.027978e-48	-8.615850e-47
Msa0508160	Msa1039650	0.814274	1.674488e-51	-8.615850e-47
Msa0512430	Msa1039650	-0.810587	1.070094e-50	-8.615850e-47
Msa0513670	Msa1039650	0.802198	6.285813e-49	-8.615850e-47
Msa0521720	Msa1039650	0.817364	3.426761e-52	-8.615850e-47
Msa0543310	Msa1039650	-0.800142	1.656035e-48	-8.615850e-47
Msa0560280	Msa1039650	0.814458	1.524984e-51	-8.615850e-47
Msa0563230	Msa1039650	-0.802412	5.680772e-49	-8.615850e-47
Msa0865810	Msa1039650	0.804454	2.144133e-49	-8.615850e-47
Msa0882070	Msa1039650	0.846593	1.969895e-59	-8.615850e-47
Msa0935830	Msa1039650	0.800270	1.559658e-48	-8.615850e-47
Msa0949410	Msa1039650	0.846669	1.878537e-59	-8.615850e-47
Msa0973000	Msa1039650	0.802289	6.019528e-49	-8.615850e-47
Msa0979050	Msa1039650	0.823904	1.077621e-53	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1039650	MtrunA17_Chr7g0272501	97.179	319	9	0	1	319	1	319	0.0	649
Msa1039650	MtrunA17_Chr7g0272531	94.357	319	18	0	1	319	31	349	0.0	634
Msa1039650	MtrunA17_Chr7g0272171	91.850	319	26	0	1	319	1	319	0.0	616
Msa1039650	MtrunA17_Chr7g0272181	86.834	319	42	0	1	319	1	319	0.0	589
Msa1039650	MtrunA17_Chr7g0272481	86.207	319	44	0	1	319	1	319	0.0	587
Msa1039650	MtrunA17_Chr7g0272431	75.862	319	77	0	1	319	1	319	0.0	520
Msa1039650	MtrunA17_Chr7g0272441	76.176	319	76	0	1	319	1	319	0.0	513
Msa1039650	MtrunA17_Chr7g0272451	75.549	319	75	1	1	319	1	316	0.0	511
Msa1039650	MtrunA17_Chr4g0000111	73.684	323	80	3	1	319	1	322	0.0	508
Msa1039650	MtrunA17_Chr4g0067581	61.059	321	121	3	1	319	37	355	5.61e-145	412
Msa1039650	MtrunA17_Chr7g0269471	60.815	319	123	2	1	319	1	317	6.36e-141	400
Msa1039650	MtrunA17_Chr8g0372491	48.297	323	155	4	1	319	3	317	1.87e-106	313
Msa1039650	MtrunA17_Chr7g0272471	84.615	156	24	0	1	156	1	156	3.66e-100	291
Msa1039650	MtrunA17_Chr1g0192291	78.616	159	30	2	1	156	1	158	1.45e-90	267
Msa1039650	MtrunA17_Chr2g0324141	36.760	321	189	6	1	318	1	310	8.31e-67	212
Msa1039650	MtrunA17_Chr4g0047701	36.760	321	188	6	1	318	1	309	1.59e-65	208
Msa1039650	MtrunA17_Chr2g0324161	35.826	321	192	7	1	318	1	310	5.20e-63	202
Msa1039650	MtrunA17_Chr4g0047681	36.137	321	190	6	1	318	1	309	5.30e-63	202
Msa1039650	MtrunA17_Chr3g0086531	89.041	73	8	0	80	152	1	73	3.80e-45	149
Msa1039650	MtrunA17_Chr7g0272461	59.615	104	42	0	178	281	2	105	2.99e-37	130
Msa1039650	MtrunA17_Chr7g0272391	59.829	117	25	2	161	276	1	96	4.84e-37	129
Msa1039650	MtrunA17_Chr7g0272511	86.842	38	5	0	278	315	29	66	3.58e-16	72.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1039650	AT3G05600.1	60.185	324	124	4	1	319	1	324	2.53e-147	417
Msa1039650	AT4G02340.1	57.188	320	132	3	1	319	1	316	6.23e-138	394
Msa1039650	AT2G26740.1	61.180	322	118	4	4	319	1	321	8.37e-130	373
Msa1039650	AT4G15960.1	52.615	325	147	3	1	319	51	374	1.41e-124	362
Msa1039650	AT2G26750.1	58.567	321	127	4	4	319	1	320	2.60e-124	359
Msa1039650	AT4G15955.3	50.613	326	123	4	5	319	6	304	1.03e-109	321
Msa1039650	AT3G05600.2	61.157	242	89	4	1	237	1	242	7.01e-108	314
Msa1039650	AT3G51000.1	48.428	318	159	5	4	319	5	319	4.13e-103	305
Msa1039650	AT4G15955.2	60.920	174	58	2	5	168	6	179	9.05e-72	220
Msa1039650	AT4G15955.1	61.212	165	54	2	5	159	6	170	1.30e-67	209

Find 99 sgRNAs with CRISPR-Local

Find 213 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACATAAGCTTTGATTCTTTC+AGG	0.126719	7_1:+76877989	None:intergenic
GGCATCAACGGTCCTGATTT+TGG	0.162298	7_1:+76877934	None:intergenic
CCTCTTGTCTTGTTCCTTCA+TGG	0.187509	7_1:-76878259	Msa1039650:CDS
TAAACAGGGTCAATGAAATT+TGG	0.224606	7_1:-76875550	Msa1039650:three_prime_UTR
AAATACTAGATGTATCTTTC+TGG	0.253896	7_1:-76875697	Msa1039650:three_prime_UTR
TTATTACATATGTAGATTTC+AGG	0.264776	7_1:-76877888	Msa1039650:intron
AAAATGCATATTGCTGAAAA+AGG	0.266560	7_1:-76878292	Msa1039650:CDS
TATGTATGTTGTGTATTATT+AGG	0.276657	7_1:+76875634	None:intergenic
AACTCTCCCTTGGGAAATAT+TGG	0.280214	7_1:+76876546	None:intergenic
ATATTTCCCAAGGGAGAGTT+TGG	0.305783	7_1:-76876543	Msa1039650:CDS
CGCCATGAATACCACAGTTC+GGG	0.324950	7_1:+76878232	None:intergenic
CACAGAACAGTGGAAGTAAA+TGG	0.328559	7_1:-76878319	Msa1039650:CDS
ATTTCTTGTGGCTCATGATT+GGG	0.336317	7_1:-76878047	Msa1039650:CDS
AGCTGATGGCACCATGGAAT+GGG	0.338259	7_1:-76876047	Msa1039650:CDS
TATTTCTTGTGGCTCATGAT+TGG	0.353373	7_1:-76878048	Msa1039650:CDS
GTCTCCAAATTTGAGAAAAC+AGG	0.355343	7_1:-76876450	Msa1039650:CDS
TTGCCGCAAAGTCTATTTCC+TGG	0.359991	7_1:-76875785	Msa1039650:three_prime_UTR
GATAATCACTTCTTCCAGAT+TGG	0.362380	7_1:+76875915	None:intergenic
CATGATTGGGGTGCCATCAT+TGG	0.372270	7_1:-76878034	Msa1039650:CDS
AAAAGACTTGCTACAACAAC+GGG	0.375220	7_1:+76875577	None:intergenic
GATGCCATGCATGCTGCTTA+TGG	0.379998	7_1:-76877917	Msa1039650:CDS
ACCCTCACAACTCGGAAAAC+TGG	0.389484	7_1:-76876573	Msa1039650:CDS
CCCAAGGGAGAGTTTGGAAC+TGG	0.389949	7_1:-76876537	Msa1039650:CDS
AGCCAAGAGGGTAAGGTGTC+AGG	0.390169	7_1:+76876498	None:intergenic
ATCACAGGAACCAGGCAAAA+TGG	0.395142	7_1:-76876640	Msa1039650:intron
GCTCCGGATCTCCGTGGTTA+TGG	0.399328	7_1:-76878166	Msa1039650:CDS
TTACTTGTATTGTAGAAATT+GGG	0.399713	7_1:-76876070	Msa1039650:intron
TCCCCGAACTGTGGTATTCA+TGG	0.400391	7_1:-76878234	Msa1039650:CDS
GAAGAAGTGATTATCCAAAA+AGG	0.403789	7_1:-76875907	Msa1039650:CDS
CATAATAGTAACGTGCTTAA+CGG	0.404805	7_1:-76875512	Msa1039650:three_prime_UTR
CTCCTGACACCTTACCCTCT+TGG	0.407073	7_1:-76876500	Msa1039650:CDS
CATAAGCTTTGATTCTTTCA+GGG	0.418162	7_1:+76877990	None:intergenic
GTGCCTGTGAAATTCATTAC+AGG	0.432209	7_1:-76876012	Msa1039650:CDS
CAAGGAAGATGTGCCCAATC+TGG	0.434486	7_1:-76875929	Msa1039650:CDS
TCCGTAGAAACCCCAAAATC+AGG	0.443771	7_1:-76877946	Msa1039650:CDS
ATAATCACTTCTTCCAGATT+GGG	0.447163	7_1:+76875916	None:intergenic
TCCAGTTCCAAACTCTCCCT+TGG	0.447351	7_1:+76876536	None:intergenic
CGGCTACCGTGCTGTTGCTC+CGG	0.456232	7_1:-76878182	Msa1039650:CDS
TTCTGTAAGCCAAGAGGGTA+AGG	0.457253	7_1:+76876491	None:intergenic
GAAAATCTATAAGTGCAATA+AGG	0.461083	7_1:+76878086	None:intergenic
GCGCCATGAATACCACAGTT+CGG	0.461173	7_1:+76878231	None:intergenic
GAGCTGATGGCACCATGGAA+TGG	0.461653	7_1:-76876048	Msa1039650:CDS
TCACCATAACCACGGAGATC+CGG	0.490155	7_1:+76878163	None:intergenic
CCAGTTCCAAACTCTCCCTT+GGG	0.501905	7_1:+76876537	None:intergenic
AGCTACAATTTCTGCTGCTA+CGG	0.506530	7_1:+76875432	None:intergenic
ACAAAGATACCAACCAATGA+TGG	0.534758	7_1:+76878021	None:intergenic
GAACCAGGAAATAGACTTTG+CGG	0.538287	7_1:+76875782	None:intergenic
AGGCAAAATGGAAGCTGAGA+TGG	0.540634	7_1:-76876628	Msa1039650:CDS
ATGGAATGGGGTGAAAATCA+AGG	0.540835	7_1:-76876034	Msa1039650:CDS
TTTCTTGTGGCTCATGATTG+GGG	0.543062	7_1:-76878046	Msa1039650:CDS
TCTCCCTTGGGAAATATTGG+AGG	0.546141	7_1:+76876549	None:intergenic
TTGGGGTTTCTACGGAGTAG+TGG	0.547389	7_1:+76877953	None:intergenic
ATTGTAGCTCTCAGCTCCCT+CGG	0.548619	7_1:-76878202	Msa1039650:CDS
ATCTCCATAAGCAGCATGCA+TGG	0.554133	7_1:+76877913	None:intergenic
CAAAAGACTTGCTACAACAA+CGG	0.556334	7_1:+76875576	None:intergenic
TCTTCTTCTGTAAGCCAAGA+GGG	0.563661	7_1:+76876486	None:intergenic
GAGCAACAGCACGGTAGCCG+AGG	0.563671	7_1:+76878185	None:intergenic
TCACCTGTAATGAATTTCAC+AGG	0.570947	7_1:+76876009	None:intergenic
AGCAACAGCACGGTAGCCGA+GGG	0.572130	7_1:+76878186	None:intergenic
ATTGGGGTGCCATCATTGGT+TGG	0.574625	7_1:-76878030	Msa1039650:CDS
ACAGTTCGGGGAAGCCATGA+AGG	0.577839	7_1:+76878245	None:intergenic
GAAGGAGTATATCCATGGTG+GGG	0.578871	7_1:-76875956	Msa1039650:CDS
TGAAGGAGTATATCCATGGT+GGG	0.583874	7_1:-76875957	Msa1039650:CDS
TGGTCCTCCAATATTTCCCA+AGG	0.588717	7_1:-76876553	Msa1039650:CDS
GAAGCTGAGATGGCTGAAGT+TGG	0.590883	7_1:-76876618	Msa1039650:CDS
AGCTGAGAGCTACAATCTGA+TGG	0.590990	7_1:+76878209	None:intergenic
AGCAGCATGCATGGCATCAA+CGG	0.592010	7_1:+76877922	None:intergenic
TGGTCCGCATCACAGGAACC+AGG	0.594410	7_1:-76876648	Msa1039650:intron
TCTTCAGTTAGTAGCTACAC+AGG	0.594878	7_1:-76878127	Msa1039650:CDS
AAGGAGTATATCCATGGTGG+GGG	0.600787	7_1:-76875955	Msa1039650:CDS
TTCATGGCTTCCCCGAACTG+TGG	0.605850	7_1:-76878243	Msa1039650:CDS
TGTTGATCAAGTATTTCTTG+TGG	0.608957	7_1:-76878059	Msa1039650:CDS
CAACAATCAAGAAGCAGCAG+AGG	0.610084	7_1:-76875872	Msa1039650:CDS
ACTAACTGAAGACGGAGCAT+CGG	0.615174	7_1:+76878138	None:intergenic
GTTATTATTAGTGACCCTTG+TGG	0.618384	7_1:+76875660	None:intergenic
CCATGAAGGAACAAGACAAG+AGG	0.618716	7_1:+76878259	None:intergenic
TTGTAGAAATTGGGAGCTGA+TGG	0.619295	7_1:-76876061	Msa1039650:intron
AACATGAAGGAGTATATCCA+TGG	0.620148	7_1:-76875961	Msa1039650:CDS
ATACTCCTTCATGTTTAGTG+AGG	0.623538	7_1:+76875969	None:intergenic
ACACGCAACTACTAAGAACC+AGG	0.628462	7_1:+76875767	None:intergenic
GCTGATGGCACCATGGAATG+GGG	0.628565	7_1:-76876046	Msa1039650:CDS
GTTTGGAACTGGATTCAACT+CGG	0.629425	7_1:-76876526	Msa1039650:CDS
TACGGTCTCATATACTCAGA+TGG	0.632430	7_1:+76875450	None:intergenic
ATTTGGAGACAAAATAAGCA+AGG	0.634682	7_1:+76876463	None:intergenic
ATGAAGGAGTATATCCATGG+TGG	0.640343	7_1:-76875958	Msa1039650:CDS
TGAAAAGTACCCTCACAACT+CGG	0.640586	7_1:-76876581	Msa1039650:CDS
ATTGGGAGCTGATGGCACCA+TGG	0.649732	7_1:-76876053	Msa1039650:CDS
GTCTTCTTCTGTAAGCCAAG+AGG	0.650739	7_1:+76876485	None:intergenic
GTGTAGCTACTAACTGAAGA+CGG	0.652352	7_1:+76878130	None:intergenic
ATACACCTCACTAAACATGA+AGG	0.662683	7_1:-76875974	Msa1039650:CDS
GGAGATCCGGAGCAACAGCA+CGG	0.668358	7_1:+76878176	None:intergenic
CTCAAAATAGCTCTCCACAA+GGG	0.671360	7_1:-76875674	Msa1039650:three_prime_UTR
AGGAATAGAACACAGAACAG+TGG	0.676997	7_1:-76878329	Msa1039650:CDS
GGTCTCATATACTCAGATGG+AGG	0.678651	7_1:+76875453	None:intergenic
GCTCAAAATAGCTCTCCACA+AGG	0.683118	7_1:-76875675	Msa1039650:three_prime_UTR
GCCATGAATACCACAGTTCG+GGG	0.692309	7_1:+76878233	None:intergenic
GGTCCTCCAATATTTCCCAA+GGG	0.706108	7_1:-76876552	Msa1039650:CDS
GCTGTTGCTCCGGATCTCCG+TGG	0.713696	7_1:-76878172	Msa1039650:CDS
CATCGGTGTCACCATAACCA+CGG	0.714613	7_1:+76878155	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAATGTTATTTTATTTTGT+AGG	-	chr7_1:76876188-76876207	Msa1039650:intron	10.0%
!!!	AAATGTTATTTTATTTTGTA+GGG	-	chr7_1:76876189-76876208	Msa1039650:intron	10.0%
!!	TAACAAAAAAAAAAAACAAT+GGG	+	chr7_1:76878138-76878157	None:intergenic	10.0%
!!	TTATGAGTCATAAAATATTA+GGG	+	chr7_1:76875949-76875968	None:intergenic	15.0%
!!	TTTATGAGTCATAAAATATT+AGG	+	chr7_1:76875950-76875969	None:intergenic	15.0%
!!	TTTATGACTCATAAAATATA+TGG	-	chr7_1:76875955-76875974	Msa1039650:CDS	15.0%
!!	TTATGACTCATAAAATATAT+GGG	-	chr7_1:76875956-76875975	Msa1039650:CDS	15.0%
!!	CAAAATTCTAAATATTTAGA+TGG	+	chr7_1:76876000-76876019	None:intergenic	15.0%
!!	AATACTTAATAACTAAATTC+AGG	-	chr7_1:76876278-76876297	Msa1039650:intron	15.0%
!!	ATACTTAATAACTAAATTCA+GGG	-	chr7_1:76876279-76876298	Msa1039650:intron	15.0%
!!	GAGATTGTTTAATATAATTA+AGG	-	chr7_1:76876405-76876424	Msa1039650:intron	15.0%
!!	ATTGTTTAATATAATTAAGG+AGG	-	chr7_1:76876408-76876427	Msa1039650:intron	15.0%
!!	GTAACAAAAAAAAAAAACAA+TGG	+	chr7_1:76878139-76878158	None:intergenic	15.0%
!!	TTATTACATATGTAGATTTC+AGG	-	chr7_1:76875856-76875875	Msa1039650:CDS	20.0%
!!	TATGACTCATAAAATATATG+GGG	-	chr7_1:76875957-76875976	Msa1039650:CDS	20.0%
!!!	TGTTGATGGAAAATTTTATA+GGG	+	chr7_1:76876060-76876079	None:intergenic	20.0%
!!!	ATGTTGATGGAAAATTTTAT+AGG	+	chr7_1:76876061-76876080	None:intergenic	20.0%
!!!	TGTTGATGGAAAATTTTTAT+AGG	+	chr7_1:76876092-76876111	None:intergenic	20.0%
!!!	AAAATATCCATCAACATTTT+TGG	-	chr7_1:76876128-76876147	Msa1039650:intron	20.0%
!!	ACAAAACTGTGAATATTTAT+AGG	-	chr7_1:76876219-76876238	Msa1039650:intron	20.0%
!!	CAAAACTGTGAATATTTATA+GGG	-	chr7_1:76876220-76876239	Msa1039650:intron	20.0%
!!	AAACTTAATTATATAGATGC+AGG	-	chr7_1:76876248-76876267	Msa1039650:intron	20.0%
!!!	TATTGATTATTGAATACGTT+AGG	-	chr7_1:76876830-76876849	Msa1039650:intron	20.0%
!!	ATTGATTATTGAATACGTTA+GGG	-	chr7_1:76876831-76876850	Msa1039650:intron	20.0%
!!	TCTGTTTCAAAACATTATAT+TGG	+	chr7_1:76877008-76877027	None:intergenic	20.0%
!!!	TTTGTTTATCTAAAATGAAG+TGG	-	chr7_1:76877032-76877051	Msa1039650:intron	20.0%
!!!	TATATGTTGACAATTCTTTT+TGG	-	chr7_1:76877401-76877420	Msa1039650:intron	20.0%
!!!	TCCATTTTTAAAACTGTTAT+TGG	-	chr7_1:76877545-76877564	Msa1039650:intron	20.0%
!!!	ACCAATAACAGTTTTAAAAA+TGG	+	chr7_1:76877549-76877568	None:intergenic	20.0%
!!	ATTACTTGTATTGTAGAAAT+TGG	-	chr7_1:76877673-76877692	Msa1039650:intron	20.0%
!!	TTACTTGTATTGTAGAAATT+GGG	-	chr7_1:76877674-76877693	Msa1039650:intron	20.0%
!!	TATGTATGTTGTGTATTATT+AGG	+	chr7_1:76878113-76878132	None:intergenic	20.0%
!	AAAATGCATATTGCTGAAAA+AGG	-	chr7_1:76875452-76875471	Msa1039650:three_prime_UTR	25.0%
!	GAAAATCTATAAGTGCAATA+AGG	+	chr7_1:76875661-76875680	None:intergenic	25.0%
!!	TATTGCACTTATAGATTTTC+TGG	-	chr7_1:76875661-76875680	Msa1039650:three_prime_UTR	25.0%
!!	ATTGCACTTATAGATTTTCT+GGG	-	chr7_1:76875662-76875681	Msa1039650:three_prime_UTR	25.0%
!	GATTGCTTAAAGTAAATTAG+GGG	+	chr7_1:76875927-76875946	None:intergenic	25.0%
!	GGATTGCTTAAAGTAAATTA+GGG	+	chr7_1:76875928-76875947	None:intergenic	25.0%
!	TATGGGGTTAATTAAGTAAA+TGG	-	chr7_1:76875973-76875992	Msa1039650:CDS	25.0%
!	ATAGGAACTAAAAATGTTGA+TGG	+	chr7_1:76876074-76876093	None:intergenic	25.0%
!	ACAATGACTAAAAATGTTGA+TGG	+	chr7_1:76876106-76876125	None:intergenic	25.0%
!!	CATTTTCCTTAAGCATTTTA+GGG	+	chr7_1:76876155-76876174	None:intergenic	25.0%
!!	ACATTTTCCTTAAGCATTTT+AGG	+	chr7_1:76876156-76876175	None:intergenic	25.0%
!!!	TCTTATGATTTTAGTTTGAG+TGG	-	chr7_1:76876307-76876326	Msa1039650:intron	25.0%
!	TCAAATAAATCTATCCAAAC+AGG	+	chr7_1:76876368-76876387	None:intergenic	25.0%
!	TTTGGATAGATTTATTTGAG+AGG	-	chr7_1:76876369-76876388	Msa1039650:intron	25.0%
!	GATTTATTTGAGAGGATTTA+CGG	-	chr7_1:76876377-76876396	Msa1039650:intron	25.0%
!	ATTTATTTGAGAGGATTTAC+GGG	-	chr7_1:76876378-76876397	Msa1039650:intron	25.0%
!!!	CTTAATCAAGTGCTTTTTTA+AGG	+	chr7_1:76876552-76876571	None:intergenic	25.0%
!!!	CTTAAAAAAGCACTTGATTA+AGG	-	chr7_1:76876550-76876569	Msa1039650:CDS	25.0%
!	AGAATTGTATGACATCATAA+TGG	-	chr7_1:76876888-76876907	Msa1039650:intron	25.0%
!	ATGATATGTAGCTAAAAGAA+AGG	+	chr7_1:76876941-76876960	None:intergenic	25.0%
!!	CTGAATAACATAATTGCTTT+TGG	-	chr7_1:76877076-76877095	Msa1039650:intron	25.0%
!!!	TTGATTTTTTGTGTTATCTC+TGG	-	chr7_1:76877364-76877383	Msa1039650:intron	25.0%
!	GAATTGTCAACATATATTTG+TGG	+	chr7_1:76877397-76877416	None:intergenic	25.0%
!	TTGAATATAACAACATGTGT+CGG	+	chr7_1:76877520-76877539	None:intergenic	25.0%
!	ATGCATCTTTCATTAGAATT+GGG	+	chr7_1:76877652-76877671	None:intergenic	25.0%
!	AATGCATCTTTCATTAGAAT+TGG	+	chr7_1:76877653-76877672	None:intergenic	25.0%
!	AAATACTAGATGTATCTTTC+TGG	-	chr7_1:76878047-76878066	Msa1039650:CDS	25.0%
!!	CAAGTCTTTTGAATTAAACA+GGG	-	chr7_1:76878180-76878199	Msa1039650:CDS	25.0%
	ATTGCTGAAAAAGGAAAAGA+AGG	-	chr7_1:76875461-76875480	Msa1039650:three_prime_UTR	30.0%
!	TACACAGGTTTTCATATAGT+AGG	-	chr7_1:76875632-76875651	Msa1039650:three_prime_UTR	30.0%
	TGTTGATCAAGTATTTCTTG+TGG	-	chr7_1:76875685-76875704	Msa1039650:three_prime_UTR	30.0%
!	CATAAGCTTTGATTCTTTCA+GGG	+	chr7_1:76875757-76875776	None:intergenic	30.0%
!	ACATAAGCTTTGATTCTTTC+AGG	+	chr7_1:76875758-76875777	None:intergenic	30.0%
	GGGATTGCTTAAAGTAAATT+AGG	+	chr7_1:76875929-76875948	None:intergenic	30.0%
	AATGCTTAAGGAAAATGTCA+CGG	-	chr7_1:76876158-76876177	Msa1039650:intron	30.0%
	ATCAAGTGTTAAATCCACTT+GGG	+	chr7_1:76876684-76876703	None:intergenic	30.0%
	AATCAAGTGTTAAATCCACT+TGG	+	chr7_1:76876685-76876704	None:intergenic	30.0%
	AGTAGAGTCTAAATCAAAAG+AGG	-	chr7_1:76876719-76876738	Msa1039650:intron	30.0%
	AATCAAAAGAGGAAACCTTA+TGG	-	chr7_1:76876730-76876749	Msa1039650:intron	30.0%
	GAATTAACTGATCAACCATA+AGG	+	chr7_1:76876748-76876767	None:intergenic	30.0%
!	ACATGTTGTGCATTTTGTTA+GGG	-	chr7_1:76876802-76876821	Msa1039650:intron	30.0%
	ATTTGGAGACAAAATAAGCA+AGG	+	chr7_1:76877284-76877303	None:intergenic	30.0%
	CAACATGACAATAATCTATG+CGG	-	chr7_1:76877437-76877456	Msa1039650:intron	30.0%
	ATAATCACTTCTTCCAGATT+GGG	+	chr7_1:76877831-76877850	None:intergenic	30.0%
	GAAGAAGTGATTATCCAAAA+AGG	-	chr7_1:76877837-76877856	Msa1039650:intron	30.0%
!	GCAAGTCTTTTGAATTAAAC+AGG	-	chr7_1:76878179-76878198	Msa1039650:CDS	30.0%
	TAAACAGGGTCAATGAAATT+TGG	-	chr7_1:76878194-76878213	Msa1039650:CDS	30.0%
	CATAATAGTAACGTGCTTAA+CGG	-	chr7_1:76878232-76878251	Msa1039650:CDS	30.0%
	TATTTCTTGTGGCTCATGAT+TGG	-	chr7_1:76875696-76875715	Msa1039650:three_prime_UTR	35.0%
	ATTTCTTGTGGCTCATGATT+GGG	-	chr7_1:76875697-76875716	Msa1039650:three_prime_UTR	35.0%
	ACAAAGATACCAACCAATGA+TGG	+	chr7_1:76875726-76875745	None:intergenic	35.0%
	CAGAGACAAAAGTAGAAAAG+TGG	+	chr7_1:76875901-76875920	None:intergenic	35.0%
	TTAGGGACCAAAAATGTTGA+TGG	+	chr7_1:76876138-76876157	None:intergenic	35.0%
	TTTGGTCCCTAAAATGCTTA+AGG	-	chr7_1:76876146-76876165	Msa1039650:intron	35.0%
	ATGCTTAAGGAAAATGTCAC+GGG	-	chr7_1:76876159-76876178	Msa1039650:intron	35.0%
	TTGATCTATCCCACTGAAAT+TGG	-	chr7_1:76876590-76876609	Msa1039650:CDS	35.0%
!	GACATGTTGTGCATTTTGTT+AGG	-	chr7_1:76876801-76876820	Msa1039650:intron	35.0%
!!	AGGGTGAAGTTCTCTTATTT+TGG	-	chr7_1:76876850-76876869	Msa1039650:intron	35.0%
!!!	GGGTGAAGTTCTCTTATTTT+GGG	-	chr7_1:76876851-76876870	Msa1039650:intron	35.0%
	TCTGAGTAGGGTAATACTTT+AGG	+	chr7_1:76876965-76876984	None:intergenic	35.0%
	GTCTCCAAATTTGAGAAAAC+AGG	-	chr7_1:76877294-76877313	Msa1039650:intron	35.0%
!	GAAGCCTGTTTTCTCAAATT+TGG	+	chr7_1:76877301-76877320	None:intergenic	35.0%
	ACAACGCTAAACACAAACAT+TGG	+	chr7_1:76877593-76877612	None:intergenic	35.0%
	TCACCTGTAATGAATTTCAC+AGG	+	chr7_1:76877738-76877757	None:intergenic	35.0%
	ATACACCTCACTAAACATGA+AGG	-	chr7_1:76877770-76877789	Msa1039650:intron	35.0%
	ATACTCCTTCATGTTTAGTG+AGG	+	chr7_1:76877778-76877797	None:intergenic	35.0%
!	AACATGAAGGAGTATATCCA+TGG	-	chr7_1:76877783-76877802	Msa1039650:intron	35.0%
	GATAATCACTTCTTCCAGAT+TGG	+	chr7_1:76877832-76877851	None:intergenic	35.0%
	AGTGATTATCCAAAAAGGAG+TGG	-	chr7_1:76877842-76877861	Msa1039650:intron	35.0%
	GTTATTATTAGTGACCCTTG+TGG	+	chr7_1:76878087-76878106	None:intergenic	35.0%
!!	AAAAGACTTGCTACAACAAC+GGG	+	chr7_1:76878170-76878189	None:intergenic	35.0%
!!	CAAAAGACTTGCTACAACAA+CGG	+	chr7_1:76878171-76878190	None:intergenic	35.0%
	AGGAATAGAACACAGAACAG+TGG	-	chr7_1:76875415-76875434	Msa1039650:three_prime_UTR	40.0%
	CACAGAACAGTGGAAGTAAA+TGG	-	chr7_1:76875425-76875444	Msa1039650:three_prime_UTR	40.0%
	GTGTAGCTACTAACTGAAGA+CGG	+	chr7_1:76875617-76875636	None:intergenic	40.0%
	TCTTCAGTTAGTAGCTACAC+AGG	-	chr7_1:76875617-76875636	Msa1039650:three_prime_UTR	40.0%
	TTTCTTGTGGCTCATGATTG+GGG	-	chr7_1:76875698-76875717	Msa1039650:three_prime_UTR	40.0%
!!!	TCCTGATTTTGGGGTTTCTA+CGG	+	chr7_1:76875802-76875821	None:intergenic	40.0%
	TGCTTAAGGAAAATGTCACG+GGG	-	chr7_1:76876160-76876179	Msa1039650:intron	40.0%
	AGTTTGAGTGGTGTTTGATG+TGG	-	chr7_1:76876319-76876338	Msa1039650:intron	40.0%
	GTTTGAGTGGTGTTTGATGT+GGG	-	chr7_1:76876320-76876339	Msa1039650:intron	40.0%
	ATGATACTGATACGCCTGTT+TGG	-	chr7_1:76876351-76876370	Msa1039650:intron	40.0%
	AGTATCTCTCTTAAGGTGAC+AGG	+	chr7_1:76876632-76876651	None:intergenic	40.0%
!	AGACTGGAGTATCTCTCTTA+AGG	+	chr7_1:76876639-76876658	None:intergenic	40.0%
	AGTGTTAAATCCACTTGGGA+TGG	+	chr7_1:76876680-76876699	None:intergenic	40.0%
	GAGACGATTCAATCTGAGTA+GGG	+	chr7_1:76876977-76876996	None:intergenic	40.0%
!!	TGAAAAGTACCCTCACAACT+CGG	-	chr7_1:76877163-76877182	Msa1039650:intron	40.0%
	AACTCTCCCTTGGGAAATAT+TGG	+	chr7_1:76877201-76877220	None:intergenic	40.0%
	ATATTTCCCAAGGGAGAGTT+TGG	-	chr7_1:76877201-76877220	Msa1039650:intron	40.0%
!	GTTTGGAACTGGATTCAACT+CGG	-	chr7_1:76877218-76877237	Msa1039650:intron	40.0%
	TCTTCTTCTGTAAGCCAAGA+GGG	+	chr7_1:76877261-76877280	None:intergenic	40.0%
	TATCAACGCGTATCAAACAC+CGG	+	chr7_1:76877490-76877509	None:intergenic	40.0%
!	ATAACAACATGTGTCGGTGT+CGG	+	chr7_1:76877514-76877533	None:intergenic	40.0%
	TTGTAGAAATTGGGAGCTGA+TGG	-	chr7_1:76877683-76877702	Msa1039650:intron	40.0%
!	TTGATTTTCACCCCATTCCA+TGG	+	chr7_1:76877711-76877730	None:intergenic	40.0%
	ATGGAATGGGGTGAAAATCA+AGG	-	chr7_1:76877710-76877729	Msa1039650:intron	40.0%
	GTGCCTGTGAAATTCATTAC+AGG	-	chr7_1:76877732-76877751	Msa1039650:intron	40.0%
!	ATGAAGGAGTATATCCATGG+TGG	-	chr7_1:76877786-76877805	Msa1039650:intron	40.0%
!	TGAAGGAGTATATCCATGGT+GGG	-	chr7_1:76877787-76877806	Msa1039650:intron	40.0%
	GAACCAGGAAATAGACTTTG+CGG	+	chr7_1:76877965-76877984	None:intergenic	40.0%
	CTCAAAATAGCTCTCCACAA+GGG	-	chr7_1:76878070-76878089	Msa1039650:CDS	40.0%
	TACGGTCTCATATACTCAGA+TGG	+	chr7_1:76878297-76878316	None:intergenic	40.0%
	AGCTACAATTTCTGCTGCTA+CGG	+	chr7_1:76878315-76878334	None:intergenic	40.0%
	CCATGAAGGAACAAGACAAG+AGG	+	chr7_1:76875488-76875507	None:intergenic	45.0%
!	CCTCTTGTCTTGTTCCTTCA+TGG	-	chr7_1:76875485-76875504	Msa1039650:three_prime_UTR	45.0%
	AGCTGAGAGCTACAATCTGA+TGG	+	chr7_1:76875538-76875557	None:intergenic	45.0%
	ACTAACTGAAGACGGAGCAT+CGG	+	chr7_1:76875609-76875628	None:intergenic	45.0%
	TCCGTAGAAACCCCAAAATC+AGG	-	chr7_1:76875798-76875817	Msa1039650:three_prime_UTR	45.0%
!	CATCAACGGTCCTGATTTTG+GGG	+	chr7_1:76875811-76875830	None:intergenic	45.0%
!	GCATCAACGGTCCTGATTTT+GGG	+	chr7_1:76875812-76875831	None:intergenic	45.0%
	ATCTCCATAAGCAGCATGCA+TGG	+	chr7_1:76875834-76875853	None:intergenic	45.0%
	TATCCCACTGAAATTGGCAC+AGG	-	chr7_1:76876596-76876615	Msa1039650:CDS	45.0%
	ATCCCACTGAAATTGGCACA+GGG	-	chr7_1:76876597-76876616	Msa1039650:CDS	45.0%
	TTCCCTGTGCCAATTTCAGT+GGG	+	chr7_1:76876602-76876621	None:intergenic	45.0%
	TTTCCCTGTGCCAATTTCAG+TGG	+	chr7_1:76876603-76876622	None:intergenic	45.0%
	CGAGACGATTCAATCTGAGT+AGG	+	chr7_1:76876978-76876997	None:intergenic	45.0%
	ATCACAGGAACCAGGCAAAA+TGG	-	chr7_1:76877104-76877123	Msa1039650:intron	45.0%
!	ATCTCAGCTTCCATTTTGCC+TGG	+	chr7_1:76877117-76877136	None:intergenic	45.0%
	AGGCAAAATGGAAGCTGAGA+TGG	-	chr7_1:76877116-76877135	Msa1039650:intron	45.0%
!	ACCAGTTTTCCGAGTTGTGA+GGG	+	chr7_1:76877175-76877194	None:intergenic	45.0%
	TGGTCCTCCAATATTTCCCA+AGG	-	chr7_1:76877191-76877210	Msa1039650:intron	45.0%
	GGTCCTCCAATATTTCCCAA+GGG	-	chr7_1:76877192-76877211	Msa1039650:intron	45.0%
	TCTCCCTTGGGAAATATTGG+AGG	+	chr7_1:76877198-76877217	None:intergenic	45.0%
	TTCTGTAAGCCAAGAGGGTA+AGG	+	chr7_1:76877256-76877275	None:intergenic	45.0%
	GTCTTCTTCTGTAAGCCAAG+AGG	+	chr7_1:76877262-76877281	None:intergenic	45.0%
	TTTCAGTTTGAAGACGTGCC+CGG	-	chr7_1:76877468-76877487	Msa1039650:intron	45.0%
	ATCAACGCGTATCAAACACC+GGG	+	chr7_1:76877489-76877508	None:intergenic	45.0%
!	GAAGGAGTATATCCATGGTG+GGG	-	chr7_1:76877788-76877807	Msa1039650:intron	45.0%
!	AAGGAGTATATCCATGGTGG+GGG	-	chr7_1:76877789-76877808	Msa1039650:intron	45.0%
	CAACAATCAAGAAGCAGCAG+AGG	-	chr7_1:76877872-76877891	Msa1039650:intron	45.0%
	TTGCCGCAAAGTCTATTTCC+TGG	-	chr7_1:76877959-76877978	Msa1039650:CDS	45.0%
	ACACGCAACTACTAAGAACC+AGG	+	chr7_1:76877980-76877999	None:intergenic	45.0%
	GCTCAAAATAGCTCTCCACA+AGG	-	chr7_1:76878069-76878088	Msa1039650:CDS	45.0%
	GGTCTCATATACTCAGATGG+AGG	+	chr7_1:76878294-76878313	None:intergenic	45.0%
!!!	AAAATATGATTTTATTTTAT+AGG	+	chr7_1:76876032-76876051	None:intergenic	5.0%
	TCCCCGAACTGTGGTATTCA+TGG	-	chr7_1:76875510-76875529	Msa1039650:three_prime_UTR	50.0%
	GCCATGAATACCACAGTTCG+GGG	+	chr7_1:76875514-76875533	None:intergenic	50.0%
	CGCCATGAATACCACAGTTC+GGG	+	chr7_1:76875515-76875534	None:intergenic	50.0%
	GCGCCATGAATACCACAGTT+CGG	+	chr7_1:76875516-76875535	None:intergenic	50.0%
	ATTGTAGCTCTCAGCTCCCT+CGG	-	chr7_1:76875542-76875561	Msa1039650:three_prime_UTR	50.0%
	TCACCATAACCACGGAGATC+CGG	+	chr7_1:76875584-76875603	None:intergenic	50.0%
!!	CATCGGTGTCACCATAACCA+CGG	+	chr7_1:76875592-76875611	None:intergenic	50.0%
!	CATGATTGGGGTGCCATCAT+TGG	-	chr7_1:76875710-76875729	Msa1039650:three_prime_UTR	50.0%
!	ATTGGGGTGCCATCATTGGT+TGG	-	chr7_1:76875714-76875733	Msa1039650:three_prime_UTR	50.0%
	TTGGGGTTTCTACGGAGTAG+TGG	+	chr7_1:76875794-76875813	None:intergenic	50.0%
!	GGCATCAACGGTCCTGATTT+TGG	+	chr7_1:76875813-76875832	None:intergenic	50.0%
	AGCAGCATGCATGGCATCAA+CGG	+	chr7_1:76875825-76875844	None:intergenic	50.0%
!	GATGCCATGCATGCTGCTTA+TGG	-	chr7_1:76875827-76875846	Msa1039650:exon	50.0%
	TAAATCCACTTGGGATGGCC+TGG	+	chr7_1:76876675-76876694	None:intergenic	50.0%
!!	TTGCTTTTGGTCCGCATCAC+AGG	-	chr7_1:76877089-76877108	Msa1039650:intron	50.0%
	TTTGCCTGGTTCCTGTGATG+CGG	+	chr7_1:76877103-76877122	None:intergenic	50.0%
	GAAGCTGAGATGGCTGAAGT+TGG	-	chr7_1:76877126-76877145	Msa1039650:intron	50.0%
	ACCCTCACAACTCGGAAAAC+TGG	-	chr7_1:76877171-76877190	Msa1039650:intron	50.0%
!	GACCAGTTTTCCGAGTTGTG+AGG	+	chr7_1:76877176-76877195	None:intergenic	50.0%
	CCAGTTCCAAACTCTCCCTT+GGG	+	chr7_1:76877210-76877229	None:intergenic	50.0%
	TCCAGTTCCAAACTCTCCCT+TGG	+	chr7_1:76877211-76877230	None:intergenic	50.0%
	AGCTGATGGCACCATGGAAT+GGG	-	chr7_1:76877697-76877716	Msa1039650:intron	50.0%
!	TATCCATGGTGGGGGATTCA+AGG	-	chr7_1:76877797-76877816	Msa1039650:intron	50.0%
	CAAGGAAGATGTGCCCAATC+TGG	-	chr7_1:76877815-76877834	Msa1039650:intron	50.0%
!	TGAAGTGCGCCACTCCTTTT+TGG	+	chr7_1:76877854-76877873	None:intergenic	50.0%
	ACAGTTCGGGGAAGCCATGA+AGG	+	chr7_1:76875502-76875521	None:intergenic	55.0%
	TTCATGGCTTCCCCGAACTG+TGG	-	chr7_1:76875501-76875520	Msa1039650:three_prime_UTR	55.0%
!!	TGGTGGTGGTGTCTTGAGAC+TGG	+	chr7_1:76876655-76876674	None:intergenic	55.0%
	AGTCTCAAGACACCACCACC+AGG	-	chr7_1:76876654-76876673	Msa1039650:intron	55.0%
!	CCCAAGGGAGAGTTTGGAAC+TGG	-	chr7_1:76877207-76877226	Msa1039650:intron	55.0%
	CTCCTGACACCTTACCCTCT+TGG	-	chr7_1:76877244-76877263	Msa1039650:intron	55.0%
!	AGCCAAGAGGGTAAGGTGTC+AGG	+	chr7_1:76877249-76877268	None:intergenic	55.0%
	ATTGGGAGCTGATGGCACCA+TGG	-	chr7_1:76877691-76877710	Msa1039650:intron	55.0%
	GAGCTGATGGCACCATGGAA+TGG	-	chr7_1:76877696-76877715	Msa1039650:intron	55.0%
	GCTGATGGCACCATGGAATG+GGG	-	chr7_1:76877698-76877717	Msa1039650:intron	55.0%
	CTTCCTTGAATCCCCCACCA+TGG	+	chr7_1:76877803-76877822	None:intergenic	55.0%
	AGCAACAGCACGGTAGCCGA+GGG	+	chr7_1:76875561-76875580	None:intergenic	60.0%
	GGAGATCCGGAGCAACAGCA+CGG	+	chr7_1:76875571-76875590	None:intergenic	60.0%
	GCTCCGGATCTCCGTGGTTA+TGG	-	chr7_1:76875578-76875597	Msa1039650:three_prime_UTR	60.0%
	ATCCACTTGGGATGGCCTGG+TGG	+	chr7_1:76876672-76876691	None:intergenic	60.0%
	TGGTCCGCATCACAGGAACC+AGG	-	chr7_1:76877096-76877115	Msa1039650:intron	60.0%
	GAGCAACAGCACGGTAGCCG+AGG	+	chr7_1:76875562-76875581	None:intergenic	65.0%
!	CGGCTACCGTGCTGTTGCTC+CGG	-	chr7_1:76875562-76875581	Msa1039650:three_prime_UTR	65.0%
	GCTGTTGCTCCGGATCTCCG+TGG	-	chr7_1:76875572-76875591	Msa1039650:three_prime_UTR	65.0%
	CACTTGGGATGGCCTGGTGG+TGG	+	chr7_1:76876669-76876688	None:intergenic	65.0%
	CACCACCAGGCCATCCCAAG+TGG	-	chr7_1:76876667-76876686	Msa1039650:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_1	gene	76875410	76878356	76875410	ID=Msa1039650;Name=Msa1039650
chr7_1	mRNA	76875410	76878356	76875410	ID=Msa1039650-mRNA-1;Parent=Msa1039650;Name=Msa1039650-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0\|0.5\|0.66\|1\|1\|1\|3\|421\|319
chr7_1	exon	76875410	76876077	76875410	ID=Msa1039650-mRNA-1:exon:20085;Parent=Msa1039650-mRNA-1
chr7_1	exon	76876411	76876655	76876411	ID=Msa1039650-mRNA-1:exon:20084;Parent=Msa1039650-mRNA-1
chr7_1	exon	76877889	76878356	76877889	ID=Msa1039650-mRNA-1:exon:20083;Parent=Msa1039650-mRNA-1
chr7_1	CDS	76877889	76878356	76877889	ID=Msa1039650-mRNA-1:cds;Parent=Msa1039650-mRNA-1
chr7_1	CDS	76876411	76876655	76876411	ID=Msa1039650-mRNA-1:cds;Parent=Msa1039650-mRNA-1
chr7_1	CDS	76875831	76876077	76875831	ID=Msa1039650-mRNA-1:cds;Parent=Msa1039650-mRNA-1
chr7_1	three_prime_UTR	76875410	76875830	76875410	ID=Msa1039650-mRNA-1:three_prime_utr;Parent=Msa1039650-mRNA-1

Gene Sequence

>Msa1039650

ATGGAAGGAATAGAACACAGAACAGTGGAAGTAAATGGAATCAAAATGCATATTGCTGAAAAAGGAAAAGAAGGTCCTCTTGTCTTGTTCCTTCATGGCTTCCCCGAACTGTGGTATTCATGGCGCCATCAGATTGTAGCTCTCAGCTCCCTCGGCTACCGTGCTGTTGCTCCGGATCTCCGTGGTTATGGTGACACCGATGCTCCGTCTTCAGTTAGTAGCTACACAGGTTTTCATATAGTAGGTGACCTTATTGCACTTATAGATTTTCTGGGTGTTGATCAAGTATTTCTTGTGGCTCATGATTGGGGTGCCATCATTGGTTGGTATCTTTGTATGTTTCGCCCTGAAAGAATCAAAGCTTATGTTTGTCTCAGTGTTCCACTACTCCGTAGAAACCCCAAAATCAGGACCGTTGATGCCATGCATGCTGCTTATGGAGATGATTATTACATATGTAGATTTCAGGAACCAGGCAAAATGGAAGCTGAGATGGCTGAAGTTGGCACTGCATATGTGATGAAAAGTACCCTCACAACTCGGAAAACTGGTCCTCCAATATTTCCCAAGGGAGAGTTTGGAACTGGATTCAACTCGGATACTCCTGACACCTTACCCTCTTGGCTTACAGAAGAAGACCTTGCTTATTTTGTCTCCAAATTTGAGAAAACAGGCTTCACTGCAGCATTGAACTACTATAGAAACTTGAACTCAAATTGGGAGCTGATGGCACCATGGAATGGGGTGAAAATCAAGGTGCCTGTGAAATTCATTACAGGTGATTTAGACAGTGTATACACCTCACTAAACATGAAGGAGTATATCCATGGTGGGGGATTCAAGGAAGATGTGCCCAATCTGGAAGAAGTGATTATCCAAAAAGGAGTGGCGCACTTCAACAATCAAGAAGCAGCAGAGGAAATAAGTAATCACATTTATGAATTCATCAAAAAGTTCTGA

Protein sequence

>Msa1039650

MEGIEHRTVEVNGIKMHIAEKGKEGPLVLFLHGFPELWYSWRHQIVALSSLGYRAVAPDLRGYGDTDAPSSVSSYTGFHIVGDLIALIDFLGVDQVFLVAHDWGAIIGWYLCMFRPERIKAYVCLSVPLLRRNPKIRTVDAMHAAYGDDYYICRFQEPGKMEAEMAEVGTAYVMKSTLTTRKTGPPIFPKGEFGTGFNSDTPDTLPSWLTEEDLAYFVSKFEKTGFTAALNYYRNLNSNWELMAPWNGVKIKVPVKFITGDLDSVYTSLNMKEYIHGGGFKEDVPNLEEVIIQKGVAHFNNQEAAEEISNHIYEFIKKF*