Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0785560 | XP_003616470.1 | 97.262 | 621 | 17 | 0 | 70 | 690 | 1 | 621 | 0.0 | 1255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0785560 | G7KGV1 | 97.262 | 621 | 17 | 0 | 70 | 690 | 1 | 621 | 0.0 | 1255 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030430 | Msa0785560 | 0.831925 | 1.266220e-55 | -8.615850e-47 |
| Msa0038350 | Msa0785560 | -0.808728 | 2.685619e-50 | -8.615850e-47 |
| Msa0075310 | Msa0785560 | 0.800973 | 1.121039e-48 | -8.615850e-47 |
| Msa0101320 | Msa0785560 | -0.801346 | 9.402230e-49 | -8.615850e-47 |
| Msa0638280 | Msa0785560 | 0.802565 | 5.282725e-49 | -8.615850e-47 |
| Msa0785560 | Msa0789570 | 0.819359 | 1.210631e-52 | -8.615850e-47 |
| Msa0785560 | Msa0824680 | 0.803173 | 3.955962e-49 | -8.615850e-47 |
| Msa0785560 | Msa0936270 | 0.810696 | 1.013850e-50 | -8.615850e-47 |
| Msa0785560 | Msa0981820 | -0.810524 | 1.104601e-50 | -8.615850e-47 |
| Msa0785560 | Msa1000300 | 0.813538 | 2.433720e-51 | -8.615850e-47 |
| Msa0785560 | Msa1111630 | 0.803046 | 4.201394e-49 | -8.615850e-47 |
| Msa0785560 | Msa1323190 | 0.815677 | 8.178899e-52 | -8.615850e-47 |
| Msa0785560 | Msa1324000 | 0.829671 | 4.518853e-55 | -8.615850e-47 |
| Msa0785560 | Msa1335860 | 0.804685 | 1.918392e-49 | -8.615850e-47 |
| Msa0785560 | Msa1362510 | 0.805317 | 1.415301e-49 | -8.615850e-47 |
| Msa0785560 | Msa1382310 | 0.806628 | 7.499258e-50 | -8.615850e-47 |
| Msa0785560 | Msa1390310 | 0.804924 | 1.709857e-49 | -8.615850e-47 |
| Msa0785560 | Msa1398480 | 0.808887 | 2.482774e-50 | -8.615850e-47 |
| Msa0124340 | Msa0785560 | 0.812395 | 4.331232e-51 | -8.615850e-47 |
| Msa0168100 | Msa0785560 | 0.812150 | 4.900567e-51 | -8.615850e-47 |
| Msa0172350 | Msa0785560 | 0.813272 | 2.783820e-51 | -8.615850e-47 |
| Msa0200950 | Msa0785560 | -0.815284 | 1.000532e-51 | -8.615850e-47 |
| Msa0376510 | Msa0785560 | 0.804088 | 2.555024e-49 | -8.615850e-47 |
| Msa0378080 | Msa0785560 | 0.805297 | 1.429153e-49 | -8.615850e-47 |
| Msa0421780 | Msa0785560 | -0.843889 | 1.061606e-58 | -8.615850e-47 |
| Msa0422830 | Msa0785560 | 0.804662 | 1.940026e-49 | -8.615850e-47 |
| Msa0422910 | Msa0785560 | 0.804307 | 2.299833e-49 | -8.615850e-47 |
| Msa0425940 | Msa0785560 | 0.800166 | 1.637368e-48 | -8.615850e-47 |
| Msa0426020 | Msa0785560 | 0.805433 | 1.338320e-49 | -8.615850e-47 |
| Msa0431430 | Msa0785560 | 0.813830 | 2.098858e-51 | -8.615850e-47 |
| Msa0437710 | Msa0785560 | 0.800679 | 1.287226e-48 | -8.615850e-47 |
| Msa0467900 | Msa0785560 | -0.806582 | 7.671941e-50 | -8.615850e-47 |
| Msa0467960 | Msa0785560 | -0.814335 | 1.623245e-51 | -8.615850e-47 |
| Msa0470180 | Msa0785560 | 0.801313 | 9.552117e-49 | -8.615850e-47 |
| Msa0480320 | Msa0785560 | 0.802825 | 4.668466e-49 | -8.615850e-47 |
| Msa0258670 | Msa0785560 | -0.811859 | 5.669708e-51 | -8.615850e-47 |
| Msa0267760 | Msa0785560 | 0.813457 | 2.535320e-51 | -8.615850e-47 |
| Msa0272480 | Msa0785560 | -0.809961 | 1.460674e-50 | -8.615850e-47 |
| Msa0358170 | Msa0785560 | 0.805248 | 1.462698e-49 | -8.615850e-47 |
| Msa0509970 | Msa0785560 | 0.800770 | 1.233175e-48 | -8.615850e-47 |
| Msa0518040 | Msa0785560 | 0.803766 | 2.980390e-49 | -8.615850e-47 |
| Msa0526640 | Msa0785560 | -0.816078 | 6.656324e-52 | -8.615850e-47 |
| Msa0526710 | Msa0785560 | 0.814361 | 1.602463e-51 | -8.615850e-47 |
| Msa0527600 | Msa0785560 | 0.802417 | 5.665736e-49 | -8.615850e-47 |
| Msa0535060 | Msa0785560 | 0.802087 | 6.624952e-49 | -8.615850e-47 |
| Msa0546840 | Msa0785560 | 0.817812 | 2.716137e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0785560 | MtrunA17_Chr5g0435731 | 97.262 | 621 | 17 | 0 | 70 | 690 | 1 | 621 | 0.0 | 1255 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0785560 | AT3G14900.1 | 61.896 | 559 | 197 | 6 | 141 | 690 | 60 | 611 | 0.0 | 657 |
Find 169 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAAATGTCTGCTGATTT+TGG | 0.159922 | 5_2:+70543362 | Msa0785560:CDS |
| AATTTATTGTAAGGTGAAAA+TGG | 0.160932 | 5_2:-70542765 | None:intergenic |
| TTTAACTAGGCATGCAATTT+TGG | 0.167182 | 5_2:+70544534 | Msa0785560:CDS |
| ATGAATGTAACATTTCTTTC+TGG | 0.167718 | 5_2:+70544743 | Msa0785560:three_prime_UTR |
| GTAAGGTGAAAATGGGTTTA+AGG | 0.168800 | 5_2:-70542757 | None:intergenic |
| AGAAACTCCGGCGGCGTTTC+CGG | 0.182326 | 5_2:-70542505 | None:intergenic |
| CACTCTCCGGGTTCGCGTTT+CGG | 0.183839 | 5_2:-70542869 | None:intergenic |
| GCAAGAATTCAGTTGTAAAA+TGG | 0.193149 | 5_2:-70542728 | None:intergenic |
| TGATCGAATGGTGAGGTTTA+TGG | 0.229882 | 5_2:+70543163 | Msa0785560:CDS |
| TTGAAATTTGATTAGGGTTT+GGG | 0.238914 | 5_2:-70542814 | None:intergenic |
| AAAATGTTTGGAGTTTCTTT+TGG | 0.254854 | 5_2:+70543859 | Msa0785560:CDS |
| GTGAAGTTTCTTACTGTTTC+CGG | 0.263801 | 5_2:-70542536 | None:intergenic |
| ACTCTCCGGGTTCGCGTTTC+GGG | 0.265491 | 5_2:-70542868 | None:intergenic |
| TTTGAGACGTGTACTTATTA+TGG | 0.268695 | 5_2:+70543746 | Msa0785560:CDS |
| TGGTATAAGTATGGTGAATA+TGG | 0.271027 | 5_2:+70543221 | Msa0785560:CDS |
| CCAACATATTTCCACTCTTC+TGG | 0.272636 | 5_2:-70544403 | None:intergenic |
| TGTGGGGTTGAAATTTGATT+AGG | 0.275563 | 5_2:-70542821 | None:intergenic |
| GCCTTCCACTCTTTAGTATA+CGG | 0.276792 | 5_2:-70543908 | None:intergenic |
| TGCAGAAGCAATAGAAAATA+TGG | 0.280801 | 5_2:+70544249 | Msa0785560:CDS |
| ACGGGTGGTGCGTCGTCTTC+TGG | 0.288444 | 5_2:+70542969 | Msa0785560:CDS |
| GTGGGGTTGAAATTTGATTA+GGG | 0.314782 | 5_2:-70542820 | None:intergenic |
| GTGAATATGGGCCGTATTCT+TGG | 0.329544 | 5_2:+70543234 | Msa0785560:CDS |
| CGAACCCGGAGAGTGAATTT+AGG | 0.332963 | 5_2:+70542877 | Msa0785560:CDS |
| GAAACTCCGGCGGCGTTTCC+GGG | 0.351103 | 5_2:-70542504 | None:intergenic |
| GATATTGGTAGGAAAGAATA+AGG | 0.356468 | 5_2:+70544562 | Msa0785560:CDS |
| GAAAATGGGTTTAAGGTTCT+AGG | 0.356727 | 5_2:-70542750 | None:intergenic |
| CGCTTGACATACACAATATC+AGG | 0.359861 | 5_2:-70543605 | None:intergenic |
| CCGTATGATTGGTATAAGTA+TGG | 0.362102 | 5_2:+70543212 | Msa0785560:CDS |
| AAGCTTTGAAGTAGTTTCAT+TGG | 0.370566 | 5_2:+70542845 | Msa0785560:CDS |
| ATTTATTGTAAGGTGAAAAT+GGG | 0.378152 | 5_2:-70542764 | None:intergenic |
| TGAATGTAACATTTCTTTCT+GGG | 0.380605 | 5_2:+70544744 | Msa0785560:three_prime_UTR |
| ATTAGATAAGTGGACTTTGA+TGG | 0.381844 | 5_2:+70543526 | Msa0785560:CDS |
| GTTGAAATTTGATTAGGGTT+TGG | 0.396176 | 5_2:-70542815 | None:intergenic |
| CAAGAATTCAGTTGTAAAAT+GGG | 0.397794 | 5_2:-70542727 | None:intergenic |
| AGAGATGGAGGAGGAGGATG+AGG | 0.409186 | 5_2:+70544096 | Msa0785560:CDS |
| TCTTGGCGTGGGATTGTTGT+TGG | 0.413217 | 5_2:+70543251 | Msa0785560:CDS |
| ATTTGAGGCATCCGTATGAT+TGG | 0.416152 | 5_2:+70543201 | Msa0785560:CDS |
| TGAAGGGCTGGAAGGAGTTT+CGG | 0.418077 | 5_2:+70544212 | Msa0785560:CDS |
| CAGAAGAGTGGAAATATGTT+GGG | 0.427096 | 5_2:+70544404 | Msa0785560:CDS |
| TTGTTGCAGCAGATTGGTCT+TGG | 0.435120 | 5_2:+70543137 | Msa0785560:CDS |
| ATGATACTGAGATTATAGAT+TGG | 0.435364 | 5_2:+70543999 | Msa0785560:CDS |
| TCGGTAATCCCACCACTAAC+CGG | 0.438464 | 5_2:-70543278 | None:intergenic |
| TAAAGAGTGGAAGGCTAAGT+TGG | 0.439895 | 5_2:+70543916 | Msa0785560:CDS |
| AAAATCCTAAATTCACTCTC+CGG | 0.447628 | 5_2:-70542882 | None:intergenic |
| GGAGGGTTTCAGAACTTCCT+TGG | 0.449832 | 5_2:+70543453 | Msa0785560:CDS |
| TGATCAAGAGATGGAGGAGG+AGG | 0.454475 | 5_2:+70544090 | Msa0785560:CDS |
| GTAAAATTTGCACCGGATGA+TGG | 0.456673 | 5_2:-70543883 | None:intergenic |
| GTTGTTGGTGAGCCGGTTAG+TGG | 0.456995 | 5_2:+70543266 | Msa0785560:CDS |
| ATATCATCATCTTCTTCATC+AGG | 0.457422 | 5_2:-70543965 | None:intergenic |
| TCATACGGATGCCTCAAATT+CGG | 0.458661 | 5_2:-70543197 | None:intergenic |
| GCCCTTCACATCTTCTTCCA+TGG | 0.464519 | 5_2:-70544197 | None:intergenic |
| TTGTTTGATGGAAATGGAAC+TGG | 0.468409 | 5_2:-70542395 | None:intergenic |
| ACAATCCCACGCCAAGAATA+CGG | 0.469604 | 5_2:-70543245 | None:intergenic |
| CAAATGATGACAGCAGAGGC+AGG | 0.471185 | 5_2:+70544313 | Msa0785560:CDS |
| AGTTCTGAAACCCTCCACTT+TGG | 0.473254 | 5_2:-70543446 | None:intergenic |
| GTCGTCTTCTGGTGGTAGAT+TGG | 0.474291 | 5_2:+70542980 | Msa0785560:CDS |
| AGTTGGATCAAACTAAGTTA+AGG | 0.475032 | 5_2:+70543399 | Msa0785560:CDS |
| CCATGTCCGTAACTAGATCT+TGG | 0.475522 | 5_2:-70544147 | None:intergenic |
| TGGAAGGTAATGCTGAGTTT+CGG | 0.476914 | 5_2:+70543000 | Msa0785560:CDS |
| TGGACTTTGATGGGAAGACT+TGG | 0.488459 | 5_2:+70543536 | Msa0785560:CDS |
| GAAGAAGATGATGATATTGT+TGG | 0.488496 | 5_2:+70543971 | Msa0785560:CDS |
| GAAGGCTAAGTTGGAAGAGA+TGG | 0.489094 | 5_2:+70543925 | Msa0785560:CDS |
| GGATAATTCCCACGTCCCCT+AGG | 0.489615 | 5_2:-70543095 | None:intergenic |
| TGAGTTGAGTTCAGTGTGAC+TGG | 0.490493 | 5_2:-70542477 | None:intergenic |
| TCACATCTTCTTCCATGGCA+TGG | 0.491608 | 5_2:-70544192 | None:intergenic |
| GAGGATTTGTTGCAGCAGAT+TGG | 0.492138 | 5_2:+70543131 | Msa0785560:CDS |
| TTAGATAAGTGGACTTTGAT+GGG | 0.493168 | 5_2:+70543527 | Msa0785560:CDS |
| CCAGAAGAGTGGAAATATGT+TGG | 0.499178 | 5_2:+70544403 | Msa0785560:CDS |
| TATTTCTGCGAGCAGCTGTT+CGG | 0.499505 | 5_2:+70544476 | Msa0785560:CDS |
| AGGGTTTGGGATTTATTGAA+AGG | 0.501241 | 5_2:-70542801 | None:intergenic |
| GAAACAATGCGTTCAGCAGA+TGG | 0.501453 | 5_2:+70544340 | Msa0785560:CDS |
| AATGGTGAGGTTTATGGAGA+AGG | 0.501783 | 5_2:+70543169 | Msa0785560:CDS |
| TGGGATTGTTGTTGGTGAGC+CGG | 0.502603 | 5_2:+70543259 | Msa0785560:CDS |
| TGAGATTATAGATTGGATTG+AGG | 0.502704 | 5_2:+70544006 | Msa0785560:CDS |
| CAGAACTTCCTTGGCAACAA+TGG | 0.503134 | 5_2:+70543462 | Msa0785560:CDS |
| GCTGCTCGCAGAAATAGATC+TGG | 0.503893 | 5_2:-70544469 | None:intergenic |
| AAAATCCTAACACAAAAGTA+AGG | 0.505085 | 5_2:-70544636 | None:intergenic |
| GGTATAAGTATGGTGAATAT+GGG | 0.506400 | 5_2:+70543222 | Msa0785560:CDS |
| TGGAAGAAGATGTGAAGGGC+TGG | 0.506654 | 5_2:+70544200 | Msa0785560:CDS |
| TAGGGGACGTGGGAATTATC+CGG | 0.508295 | 5_2:+70543097 | Msa0785560:CDS |
| TCCGTGCGAGGATCAAGAAA+TGG | 0.508804 | 5_2:-70543683 | None:intergenic |
| TGCTCGCTTTCCTCTCAACA+TGG | 0.510554 | 5_2:-70544371 | None:intergenic |
| ACTTGTGAAGGTGAATCAAA+AGG | 0.514790 | 5_2:+70543781 | Msa0785560:CDS |
| GTAAACAGAGATTAGATAAG+TGG | 0.514937 | 5_2:+70543516 | Msa0785560:CDS |
| TCAAACCTACACTGGAACAC+TGG | 0.515942 | 5_2:-70543629 | None:intergenic |
| AGAGATGTTGGGTGTTATGC+GGG | 0.517362 | 5_2:+70542933 | Msa0785560:CDS |
| AAGTGAAGGATCATGAAGAG+TGG | 0.518155 | 5_2:+70543324 | Msa0785560:CDS |
| AAATCCTAAATTCACTCTCC+GGG | 0.519570 | 5_2:-70542881 | None:intergenic |
| AGAAGGATGATCCGAATTTG+AGG | 0.519641 | 5_2:+70543186 | Msa0785560:CDS |
| AGAAGATGTGAAGGGCTGGA+AGG | 0.524200 | 5_2:+70544204 | Msa0785560:CDS |
| TGTCAGTTAGAAAATGATGA+TGG | 0.526533 | 5_2:+70543719 | Msa0785560:CDS |
| GATGGGAAGACTTGGGAACA+AGG | 0.528269 | 5_2:+70543544 | Msa0785560:CDS |
| ACAAGATTTCTGTAACTGAA+AGG | 0.529435 | 5_2:-70544499 | None:intergenic |
| AATGATGACAGCAGAGGCAG+GGG | 0.532302 | 5_2:+70544315 | Msa0785560:CDS |
| AGTGAAGGATCATGAAGAGT+GGG | 0.533298 | 5_2:+70543325 | Msa0785560:CDS |
| GAAGGATCATGAAGAGTGGG+AGG | 0.533393 | 5_2:+70543328 | Msa0785560:CDS |
| GTGTTGAGTAGAAGAGATGT+TGG | 0.540783 | 5_2:+70542921 | Msa0785560:CDS |
| TATGGGCCGTATTCTTGGCG+TGG | 0.547439 | 5_2:+70543239 | Msa0785560:CDS |
| ATGGGCCGTATTCTTGGCGT+GGG | 0.548779 | 5_2:+70543240 | Msa0785560:CDS |
| ATAGATTGGATTGAGGATGA+AGG | 0.550849 | 5_2:+70544013 | Msa0785560:CDS |
| GATAATTCCCACGTCCCCTA+GGG | 0.552003 | 5_2:-70543094 | None:intergenic |
| GACATGGAAGAAAGCAAAGA+TGG | 0.552660 | 5_2:+70544163 | Msa0785560:CDS |
| CAGTAAGAAACTTCACCGTA+AGG | 0.553253 | 5_2:+70542543 | Msa0785560:CDS |
| AGTGAAGTGGTACTTGAAGC+TGG | 0.554506 | 5_2:+70543494 | Msa0785560:CDS |
| TGATGATCAAGAGATGGAGG+AGG | 0.556072 | 5_2:+70544087 | Msa0785560:CDS |
| AATATGTTGGGGTCGGTCCG+TGG | 0.558392 | 5_2:+70544416 | Msa0785560:CDS |
| ATTGGCCCGAAACGCGAACC+CGG | 0.561273 | 5_2:+70542863 | Msa0785560:CDS |
| AGATGGTAAATTCCATGCCA+TGG | 0.563672 | 5_2:+70544180 | Msa0785560:CDS |
| ACTAATGTCCATTGTTGCCA+AGG | 0.565467 | 5_2:-70543470 | None:intergenic |
| TGCCATGGAAGAAGATGTGA+AGG | 0.565694 | 5_2:+70544195 | Msa0785560:CDS |
| GACGATAATTAATGAAGTGA+AGG | 0.567261 | 5_2:+70543310 | Msa0785560:CDS |
| GTTGGTGAGCCGGTTAGTGG+TGG | 0.568225 | 5_2:+70543269 | Msa0785560:CDS |
| CATTAGGCATCCAAAGTGGA+GGG | 0.569004 | 5_2:+70543436 | Msa0785560:CDS |
| CTGATACTACGAGGGAAAAG+TGG | 0.569615 | 5_2:-70542445 | None:intergenic |
| TACGGATGTAAAATTTGCAC+CGG | 0.570208 | 5_2:-70543890 | None:intergenic |
| AAATGATGACAGCAGAGGCA+GGG | 0.570891 | 5_2:+70544314 | Msa0785560:CDS |
| CTTGTGGCTCAAACCTACAC+TGG | 0.570916 | 5_2:-70543637 | None:intergenic |
| AATTATCGTCACACACTCAT+CGG | 0.573816 | 5_2:-70543297 | None:intergenic |
| AGCGGCCAGTGTTCCAGTGT+AGG | 0.574271 | 5_2:+70543624 | Msa0785560:CDS |
| CTGAACTCAACTCAACTGCC+CGG | 0.574557 | 5_2:+70542486 | Msa0785560:CDS |
| TCATTAGGCATCCAAAGTGG+AGG | 0.578518 | 5_2:+70543435 | Msa0785560:CDS |
| TCCATTTCTTGATCCTCGCA+CGG | 0.582367 | 5_2:+70543682 | Msa0785560:CDS |
| AAGTTGGAAGAGATGGAGCT+TGG | 0.584190 | 5_2:+70543932 | Msa0785560:CDS |
| TCTTCTGGTGGTAGATTGGA+AGG | 0.584210 | 5_2:+70542984 | Msa0785560:CDS |
| CAACTGCCCGGAAACGCCGC+CGG | 0.584721 | 5_2:+70542498 | Msa0785560:CDS |
| CCATACTTATACCAATCATA+CGG | 0.586671 | 5_2:-70543212 | None:intergenic |
| TGGGAACAAGGCGAGGTCGT+TGG | 0.587019 | 5_2:+70543556 | Msa0785560:CDS |
| GAGACGTGTACTTATTATGG+TGG | 0.587110 | 5_2:+70543749 | Msa0785560:CDS |
| TGTTGAGTAGAAGAGATGTT+GGG | 0.587174 | 5_2:+70542922 | Msa0785560:CDS |
| TCCGTATACTAAAGAGTGGA+AGG | 0.588283 | 5_2:+70543907 | Msa0785560:CDS |
| TGCAGACCAAGATCTAGTTA+CGG | 0.589324 | 5_2:+70544141 | Msa0785560:CDS |
| TGCGGGTCGTAGTAAGAAGA+CGG | 0.591662 | 5_2:+70542950 | Msa0785560:CDS |
| CCAAGATCTAGTTACGGACA+TGG | 0.594116 | 5_2:+70544147 | Msa0785560:CDS |
| GACGGATGAAGCGTAATGCG+AGG | 0.596363 | 5_2:+70543024 | Msa0785560:CDS |
| CAAAGGTTAGTCCAGAAGAG+TGG | 0.597981 | 5_2:+70544392 | Msa0785560:CDS |
| TTGGTGAGCCGGTTAGTGGT+GGG | 0.598420 | 5_2:+70543270 | Msa0785560:CDS |
| TACATCCGTATACTAAAGAG+TGG | 0.605532 | 5_2:+70543903 | Msa0785560:CDS |
| AAGAGATGTTGGGTGTTATG+CGG | 0.609130 | 5_2:+70542932 | Msa0785560:CDS |
| TGATGATGATCAAGAGATGG+AGG | 0.609821 | 5_2:+70544084 | Msa0785560:CDS |
| GCGGGTCGTAGTAAGAAGAC+GGG | 0.610634 | 5_2:+70542951 | Msa0785560:CDS |
| GGACTTTGATGGGAAGACTT+GGG | 0.612268 | 5_2:+70543537 | Msa0785560:CDS |
| ATTGAGGATGAAGGTAGTGA+CGG | 0.612279 | 5_2:+70544022 | Msa0785560:CDS |
| CTGATATTGTGTATGTCAAG+CGG | 0.614017 | 5_2:+70543606 | Msa0785560:CDS |
| AGGTAATCTTGTTCCGTGCG+AGG | 0.617139 | 5_2:-70543695 | None:intergenic |
| GAGTGGAAATATGTTGGGGT+CGG | 0.617989 | 5_2:+70544409 | Msa0785560:CDS |
| CTACGAGGGAAAAGTGGTAG+CGG | 0.620621 | 5_2:-70542439 | None:intergenic |
| AAGCAATAGAAAATATGGCA+AGG | 0.622667 | 5_2:+70544254 | Msa0785560:CDS |
| ATGGACATTAGTTAGTGAAG+TGG | 0.630502 | 5_2:+70543481 | Msa0785560:CDS |
| TGATGATGATGATCAAGAGA+TGG | 0.630876 | 5_2:+70544081 | Msa0785560:CDS |
| GAAGACTTGGGAACAAGGCG+AGG | 0.631730 | 5_2:+70543549 | Msa0785560:CDS |
| GGAGATGCTGAATTTGATGA+TGG | 0.631971 | 5_2:+70544043 | Msa0785560:CDS |
| CCGGCGACTGATAGAAACTC+CGG | 0.632396 | 5_2:-70542517 | None:intergenic |
| GTAATGCTGAGTTTCGGAGA+CGG | 0.637110 | 5_2:+70543006 | Msa0785560:CDS |
| ACGGATGAAGCGTAATGCGA+GGG | 0.640017 | 5_2:+70543025 | Msa0785560:CDS |
| GGTGGTGCGTCGTCTTCTGG+TGG | 0.646886 | 5_2:+70542972 | Msa0785560:CDS |
| GTTGAGAGGAAAGCGAGCAA+AGG | 0.647062 | 5_2:+70544375 | Msa0785560:CDS |
| GGAGACGAAACCATGTTGAG+AGG | 0.649640 | 5_2:+70544361 | Msa0785560:CDS |
| AGAAGAGTGGAAATATGTTG+GGG | 0.650568 | 5_2:+70544405 | Msa0785560:CDS |
| GCTCGCAGAAATAGATCTGG+AGG | 0.651520 | 5_2:-70544466 | None:intergenic |
| TGGATTGTGTAAACTTGTGA+AGG | 0.667346 | 5_2:+70543769 | Msa0785560:CDS |
| TGGTCTTGGATATGATCGAA+TGG | 0.675588 | 5_2:+70543151 | Msa0785560:CDS |
| TTGGATATGATCGAATGGTG+AGG | 0.678613 | 5_2:+70543156 | Msa0785560:CDS |
| GGTCGTAGTAAGAAGACGGG+TGG | 0.679738 | 5_2:+70542954 | Msa0785560:CDS |
| GAAGCAAATGATGACAGCAG+AGG | 0.690214 | 5_2:+70544309 | Msa0785560:CDS |
| ACTTGTGACTGATACTACGA+GGG | 0.702917 | 5_2:-70542453 | None:intergenic |
| TGGTAGCGCAATGTGCAGCG+TGG | 0.717995 | 5_2:+70543576 | Msa0785560:CDS |
| AACTTGTGACTGATACTACG+AGG | 0.725162 | 5_2:-70542454 | None:intergenic |
| GCGACTGATAGAAACTCCGG+CGG | 0.732611 | 5_2:-70542514 | None:intergenic |
| GCCATGGAAGAAGATGTGAA+GGG | 0.771952 | 5_2:+70544196 | Msa0785560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGTTTAAATATGTTTT+TGG | - | chr5_2:70541720-70541739 | None:intergenic | 10.0% |
| !!! | ATTTTTAATGTTTTATTTGA+AGG | + | chr5_2:70542670-70542689 | Msa0785560:intron | 10.0% |
| !!! | GAACTAATTTTTTTTAAACT+CGG | - | chr5_2:70542052-70542071 | None:intergenic | 15.0% |
| !! | TTCATATTAATCGTATAAAA+CGG | - | chr5_2:70542182-70542201 | None:intergenic | 15.0% |
| !! | AAAAAGGAAAATTTATTGTA+AGG | - | chr5_2:70542777-70542796 | None:intergenic | 15.0% |
| !! | TTTATTGAAAGGTTTAAAAA+AGG | - | chr5_2:70542793-70542812 | None:intergenic | 15.0% |
| !!! | CATGGTTTTTTTTTTTTTGA+CGG | + | chr5_2:70541419-70541438 | Msa0785560:intron | 20.0% |
| !! | ATTAGACATCAAAAAACTAA+CGG | + | chr5_2:70541559-70541578 | Msa0785560:intron | 20.0% |
| !! | TGAAAACCAAAAATAAGTTA+AGG | + | chr5_2:70541655-70541674 | Msa0785560:intron | 20.0% |
| !! | GAAAACCAAAAATAAGTTAA+GGG | + | chr5_2:70541656-70541675 | Msa0785560:intron | 20.0% |
| !! | AGATTTGTATTTAGCATATT+AGG | - | chr5_2:70541768-70541787 | None:intergenic | 20.0% |
| !! | CAAATTCACTAAAAACAAAA+AGG | - | chr5_2:70542231-70542250 | None:intergenic | 20.0% |
| !!! | TTTGTTTTTCTTTTGTTTGA+TGG | - | chr5_2:70542410-70542429 | None:intergenic | 20.0% |
| !!! | CTTTTGAATTTTTAGTTTAC+TGG | + | chr5_2:70542573-70542592 | Msa0785560:intron | 20.0% |
| !! | ATTTATTGTAAGGTGAAAAT+GGG | - | chr5_2:70542767-70542786 | None:intergenic | 20.0% |
| !! | AATTTATTGTAAGGTGAAAA+TGG | - | chr5_2:70542768-70542787 | None:intergenic | 20.0% |
| !!! | TGAATTTAGGATTTTTAGTA+AGG | + | chr5_2:70542890-70542909 | Msa0785560:CDS | 20.0% |
| !!! | AAACTAAGTTAAGGTATTTT+TGG | + | chr5_2:70543408-70543427 | Msa0785560:CDS | 20.0% |
| !!! | AACTAAGTTAAGGTATTTTT+GGG | + | chr5_2:70543409-70543428 | Msa0785560:CDS | 20.0% |
| !! | TGAAAAAAAGTCAAAATGTT+TGG | + | chr5_2:70543847-70543866 | Msa0785560:CDS | 20.0% |
| !!! | TTAAAGAGATTGTTTTAACT+AGG | + | chr5_2:70544521-70544540 | Msa0785560:CDS | 20.0% |
| !!! | CATAATTTTTTTCAGAAACT+AGG | - | chr5_2:70544671-70544690 | None:intergenic | 20.0% |
| ! | TAATTCTCAATTTGTGTCTT+GGG | - | chr5_2:70541091-70541110 | None:intergenic | 25.0% |
| ! | TTAATTCTCAATTTGTGTCT+TGG | - | chr5_2:70541092-70541111 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTGACGGAAGA+AGG | + | chr5_2:70541426-70541445 | Msa0785560:intron | 25.0% |
| ! | TTAGACATCAAAAAACTAAC+GGG | + | chr5_2:70541560-70541579 | Msa0785560:intron | 25.0% |
| !! | TTTGAGACACTTTATAGTTA+AGG | + | chr5_2:70541624-70541643 | Msa0785560:intron | 25.0% |
| ! | TTGAGACACTTTATAGTTAA+GGG | + | chr5_2:70541625-70541644 | Msa0785560:intron | 25.0% |
| !!! | CTTATTTTTGGTTTTCAGTT+TGG | - | chr5_2:70541652-70541671 | None:intergenic | 25.0% |
| ! | TTAAGGCTTAATACATCATT+TGG | - | chr5_2:70541683-70541702 | None:intergenic | 25.0% |
| ! | TGGCTCTTAAAGATAATTTA+AGG | - | chr5_2:70541700-70541719 | None:intergenic | 25.0% |
| !! | AGAAATAACCCATTTAAAGT+TGG | + | chr5_2:70541836-70541855 | Msa0785560:intron | 25.0% |
| !!! | TTTCTTTTGTTTGATGGAAA+TGG | - | chr5_2:70542404-70542423 | None:intergenic | 25.0% |
| ! | TTCAAAAGAGAAAAACCTTA+CGG | - | chr5_2:70542561-70542580 | None:intergenic | 25.0% |
| !!! | GCTGAATATTTTTGTTGAAA+TGG | + | chr5_2:70542698-70542717 | Msa0785560:CDS | 25.0% |
| ! | CAAGAATTCAGTTGTAAAAT+GGG | - | chr5_2:70542730-70542749 | None:intergenic | 25.0% |
| ! | TTGAAATTTGATTAGGGTTT+GGG | - | chr5_2:70542817-70542836 | None:intergenic | 25.0% |
| !! | GAATTATCCGGATAATTTTT+CGG | + | chr5_2:70543109-70543128 | Msa0785560:CDS | 25.0% |
| ! | GCATTAAAAAAGTTATCTTG+TGG | - | chr5_2:70543656-70543675 | None:intergenic | 25.0% |
| !!! | AAAATGTTTGGAGTTTCTTT+TGG | + | chr5_2:70543859-70543878 | Msa0785560:CDS | 25.0% |
| !!! | AAATGTTTGGAGTTTCTTTT+GGG | + | chr5_2:70543860-70543879 | Msa0785560:CDS | 25.0% |
| ! | ATGATACTGAGATTATAGAT+TGG | + | chr5_2:70543999-70544018 | Msa0785560:CDS | 25.0% |
| !!! | TTCTTAATCTTTTTTCTCCA+CGG | - | chr5_2:70544436-70544455 | None:intergenic | 25.0% |
| !!! | ATTTTCCTTACTTTTGTGTT+AGG | + | chr5_2:70544631-70544650 | Msa0785560:three_prime_UTR | 25.0% |
| ! | AAAATCCTAACACAAAAGTA+AGG | - | chr5_2:70544639-70544658 | None:intergenic | 25.0% |
| ! | ATGAATGTAACATTTCTTTC+TGG | + | chr5_2:70544743-70544762 | Msa0785560:three_prime_UTR | 25.0% |
| ! | TGAATGTAACATTTCTTTCT+GGG | + | chr5_2:70544744-70544763 | Msa0785560:three_prime_UTR | 25.0% |
| ! | CATGTGAATATCAATTTTGC+AGG | + | chr5_2:70541045-70541064 | Msa0785560:intron | 30.0% |
| AATTTGTGTCTTGGGTTAAT+GGG | - | chr5_2:70541083-70541102 | None:intergenic | 30.0% | |
| AGAAGGAAAAAAATCAGATG+TGG | + | chr5_2:70541478-70541497 | Msa0785560:intron | 30.0% | |
| TAGACATCAAAAAACTAACG+GGG | + | chr5_2:70541561-70541580 | Msa0785560:intron | 30.0% | |
| ! | AACTATAAAGTGTCTCAAAC+TGG | - | chr5_2:70541623-70541642 | None:intergenic | 30.0% |
| !! | TTGGTCCCTTAACTTATTTT+TGG | - | chr5_2:70541664-70541683 | None:intergenic | 30.0% |
| TGCTAAATACAAATCTCCAA+TGG | + | chr5_2:70541772-70541791 | Msa0785560:intron | 30.0% | |
| ! | TTTTCAAAACCATCGTTTGA+AGG | + | chr5_2:70542104-70542123 | Msa0785560:intron | 30.0% |
| ATTATCTTTCCTTCAAACGA+TGG | - | chr5_2:70542116-70542135 | None:intergenic | 30.0% | |
| GCAAGAATTCAGTTGTAAAA+TGG | - | chr5_2:70542731-70542750 | None:intergenic | 30.0% | |
| GTTGAAATTTGATTAGGGTT+TGG | - | chr5_2:70542818-70542837 | None:intergenic | 30.0% | |
| ! | AACTACTTCAAAGCTTTTGT+GGG | - | chr5_2:70542841-70542860 | None:intergenic | 30.0% |
| ! | AAACTACTTCAAAGCTTTTG+TGG | - | chr5_2:70542842-70542861 | None:intergenic | 30.0% |
| !! | AAGCTTTGAAGTAGTTTCAT+TGG | + | chr5_2:70542845-70542864 | Msa0785560:CDS | 30.0% |
| AAAATCCTAAATTCACTCTC+CGG | - | chr5_2:70542885-70542904 | None:intergenic | 30.0% | |
| !!! | TTGCTGAGAGTTTGTTTTAT+AGG | + | chr5_2:70543063-70543082 | Msa0785560:CDS | 30.0% |
| ! | TTTATAGGTTGAAAAACCCT+AGG | + | chr5_2:70543078-70543097 | Msa0785560:CDS | 30.0% |
| ! | TTATAGGTTGAAAAACCCTA+GGG | + | chr5_2:70543079-70543098 | Msa0785560:CDS | 30.0% |
| AAATCCTCCGAAAAATTATC+CGG | - | chr5_2:70543119-70543138 | None:intergenic | 30.0% | |
| CCATACTTATACCAATCATA+CGG | - | chr5_2:70543215-70543234 | None:intergenic | 30.0% | |
| TGGTATAAGTATGGTGAATA+TGG | + | chr5_2:70543221-70543240 | Msa0785560:CDS | 30.0% | |
| GGTATAAGTATGGTGAATAT+GGG | + | chr5_2:70543222-70543241 | Msa0785560:CDS | 30.0% | |
| GACGATAATTAATGAAGTGA+AGG | + | chr5_2:70543310-70543329 | Msa0785560:CDS | 30.0% | |
| AGTTGGATCAAACTAAGTTA+AGG | + | chr5_2:70543399-70543418 | Msa0785560:CDS | 30.0% | |
| !!! | GGTATTTTTGGGTTTTCATT+AGG | + | chr5_2:70543420-70543439 | Msa0785560:CDS | 30.0% |
| GTAAACAGAGATTAGATAAG+TGG | + | chr5_2:70543516-70543535 | Msa0785560:CDS | 30.0% | |
| ! | ATTAGATAAGTGGACTTTGA+TGG | + | chr5_2:70543526-70543545 | Msa0785560:CDS | 30.0% |
| ! | TTAGATAAGTGGACTTTGAT+GGG | + | chr5_2:70543527-70543546 | Msa0785560:CDS | 30.0% |
| ! | CATCATTTTCTAACTGACAA+AGG | - | chr5_2:70543718-70543737 | None:intergenic | 30.0% |
| TGTCAGTTAGAAAATGATGA+TGG | + | chr5_2:70543719-70543738 | Msa0785560:CDS | 30.0% | |
| ! | TTTGAGACGTGTACTTATTA+TGG | + | chr5_2:70543746-70543765 | Msa0785560:CDS | 30.0% |
| ATATCATCATCTTCTTCATC+AGG | - | chr5_2:70543968-70543987 | None:intergenic | 30.0% | |
| GAAGAAGATGATGATATTGT+TGG | + | chr5_2:70543971-70543990 | Msa0785560:CDS | 30.0% | |
| TGAGATTATAGATTGGATTG+AGG | + | chr5_2:70544006-70544025 | Msa0785560:CDS | 30.0% | |
| TGCAGAAGCAATAGAAAATA+TGG | + | chr5_2:70544249-70544268 | Msa0785560:CDS | 30.0% | |
| AAGCAATAGAAAATATGGCA+AGG | + | chr5_2:70544254-70544273 | Msa0785560:CDS | 30.0% | |
| ACAAGATTTCTGTAACTGAA+AGG | - | chr5_2:70544502-70544521 | None:intergenic | 30.0% | |
| ! | TTTAACTAGGCATGCAATTT+TGG | + | chr5_2:70544534-70544553 | Msa0785560:CDS | 30.0% |
| GATATTGGTAGGAAAGAATA+AGG | + | chr5_2:70544562-70544581 | Msa0785560:CDS | 30.0% | |
| ! | GTGAATATCAATTTTGCAGG+TGG | + | chr5_2:70541048-70541067 | Msa0785560:intron | 35.0% |
| CAATTTGTGTCTTGGGTTAA+TGG | - | chr5_2:70541084-70541103 | None:intergenic | 35.0% | |
| ! | TGAATTTTGCAGAGAAAGAG+AGG | + | chr5_2:70541293-70541312 | Msa0785560:intron | 35.0% |
| AGGAGGAATTCAGATTCAAT+TGG | + | chr5_2:70541381-70541400 | Msa0785560:intron | 35.0% | |
| AGGAATTCAGATTCAATTGG+TGG | + | chr5_2:70541384-70541403 | Msa0785560:intron | 35.0% | |
| AATTCAGATTCAATTGGTGG+TGG | + | chr5_2:70541387-70541406 | Msa0785560:intron | 35.0% | |
| !!! | TTTTTTTGACGGAAGAAGGA+AGG | + | chr5_2:70541430-70541449 | Msa0785560:intron | 35.0% |
| AGGAAAAAAATCAGATGTGG+TGG | + | chr5_2:70541481-70541500 | Msa0785560:intron | 35.0% | |
| TGGTTCACAGTAGTATACTA+TGG | + | chr5_2:70541501-70541520 | Msa0785560:intron | 35.0% | |
| !! | CGATTTTGTTATCGTTCCAT+TGG | - | chr5_2:70541791-70541810 | None:intergenic | 35.0% |
| ! | TAACCCATTTAAAGTTGGTC+TGG | + | chr5_2:70541841-70541860 | Msa0785560:intron | 35.0% |
| ATTCCTTATGGAGCCAATTT+CGG | + | chr5_2:70541926-70541945 | Msa0785560:intron | 35.0% | |
| ! | AGATTAGTCGATCCTTAGAT+CGG | + | chr5_2:70542023-70542042 | Msa0785560:intron | 35.0% |
| ACTTTCAAATACAACGACGT+AGG | + | chr5_2:70542143-70542162 | Msa0785560:intron | 35.0% | |
| TTGTTTGATGGAAATGGAAC+TGG | - | chr5_2:70542398-70542417 | None:intergenic | 35.0% | |
| GTGAAGTTTCTTACTGTTTC+CGG | - | chr5_2:70542539-70542558 | None:intergenic | 35.0% | |
| ! | GAAAATGGGTTTAAGGTTCT+AGG | - | chr5_2:70542753-70542772 | None:intergenic | 35.0% |
| ! | GTAAGGTGAAAATGGGTTTA+AGG | - | chr5_2:70542760-70542779 | None:intergenic | 35.0% |
| ! | AGGGTTTGGGATTTATTGAA+AGG | - | chr5_2:70542804-70542823 | None:intergenic | 35.0% |
| GTGGGGTTGAAATTTGATTA+GGG | - | chr5_2:70542823-70542842 | None:intergenic | 35.0% | |
| TGTGGGGTTGAAATTTGATT+AGG | - | chr5_2:70542824-70542843 | None:intergenic | 35.0% | |
| ! | ACTACTTCAAAGCTTTTGTG+GGG | - | chr5_2:70542840-70542859 | None:intergenic | 35.0% |
| AAATCCTAAATTCACTCTCC+GGG | - | chr5_2:70542884-70542903 | None:intergenic | 35.0% | |
| TGTTGAGTAGAAGAGATGTT+GGG | + | chr5_2:70542922-70542941 | Msa0785560:CDS | 35.0% | |
| ! | TATAGGTTGAAAAACCCTAG+GGG | + | chr5_2:70543080-70543099 | Msa0785560:CDS | 35.0% |
| !! | TTATCCGGATAATTTTTCGG+AGG | + | chr5_2:70543112-70543131 | Msa0785560:CDS | 35.0% |
| CCGTATGATTGGTATAAGTA+TGG | + | chr5_2:70543212-70543231 | Msa0785560:CDS | 35.0% | |
| AATTATCGTCACACACTCAT+CGG | - | chr5_2:70543300-70543319 | None:intergenic | 35.0% | |
| !!! | TCTGAAATGTCTGCTGATTT+TGG | + | chr5_2:70543362-70543381 | Msa0785560:CDS | 35.0% |
| !!! | CTGAAATGTCTGCTGATTTT+GGG | + | chr5_2:70543363-70543382 | Msa0785560:CDS | 35.0% |
| ! | TTTTCATTAGGCATCCAAAG+TGG | + | chr5_2:70543432-70543451 | Msa0785560:CDS | 35.0% |
| ATGGACATTAGTTAGTGAAG+TGG | + | chr5_2:70543481-70543500 | Msa0785560:CDS | 35.0% | |
| CTGATATTGTGTATGTCAAG+CGG | + | chr5_2:70543606-70543625 | Msa0785560:CDS | 35.0% | |
| TGGATTGTGTAAACTTGTGA+AGG | + | chr5_2:70543769-70543788 | Msa0785560:CDS | 35.0% | |
| ACTTGTGAAGGTGAATCAAA+AGG | + | chr5_2:70543781-70543800 | Msa0785560:CDS | 35.0% | |
| !!! | AAAGGCTTTTGTTGATGATG+TGG | + | chr5_2:70543799-70543818 | Msa0785560:CDS | 35.0% |
| TACGGATGTAAAATTTGCAC+CGG | - | chr5_2:70543893-70543912 | None:intergenic | 35.0% | |
| TACATCCGTATACTAAAGAG+TGG | + | chr5_2:70543903-70543922 | Msa0785560:CDS | 35.0% | |
| ATAGATTGGATTGAGGATGA+AGG | + | chr5_2:70544013-70544032 | Msa0785560:CDS | 35.0% | |
| ! | TGATGATGATGATCAAGAGA+TGG | + | chr5_2:70544081-70544100 | Msa0785560:CDS | 35.0% |
| CAGAAGAGTGGAAATATGTT+GGG | + | chr5_2:70544404-70544423 | Msa0785560:CDS | 35.0% | |
| AGAAGAGTGGAAATATGTTG+GGG | + | chr5_2:70544405-70544424 | Msa0785560:CDS | 35.0% | |
| ! | GCAATTTTGGATGGTGATAT+TGG | + | chr5_2:70544547-70544566 | Msa0785560:CDS | 35.0% |
| ! | TTTTGGATGGTGATATTGGT+AGG | + | chr5_2:70544551-70544570 | Msa0785560:CDS | 35.0% |
| ATGGTATGTTGGATGTAGCT+TGG | + | chr5_2:70540886-70540905 | Msa0785560:intron | 40.0% | |
| AATTCACGATCCCATTGAAC+CGG | - | chr5_2:70541279-70541298 | None:intergenic | 40.0% | |
| GAGAGAGAGAGAAAAGAAGA+AGG | + | chr5_2:70541336-70541355 | Msa0785560:intron | 40.0% | |
| GAGAGAGAAAAGAAGAAGGA+AGG | + | chr5_2:70541340-70541359 | Msa0785560:intron | 40.0% | |
| AGAAGAAGGAAGGAAGAAGA+AGG | + | chr5_2:70541350-70541369 | Msa0785560:intron | 40.0% | |
| AGAAGGAAGGAAAAGGAAGA+AGG | + | chr5_2:70541443-70541462 | Msa0785560:intron | 40.0% | |
| ACTATGGACCTGCAATCAAA+CGG | + | chr5_2:70541517-70541536 | Msa0785560:intron | 40.0% | |
| GATTACAACCGTTTGATTGC+AGG | - | chr5_2:70541528-70541547 | None:intergenic | 40.0% | |
| ACATCAAAAAACTAACGGGG+AGG | + | chr5_2:70541564-70541583 | Msa0785560:intron | 40.0% | |
| GTAAACGGCAGAAGAGATAA+GGG | + | chr5_2:70541596-70541615 | Msa0785560:intron | 40.0% | |
| CCACCAGACCAACTTTAAAT+GGG | - | chr5_2:70541847-70541866 | None:intergenic | 40.0% | |
| ACCACCAGACCAACTTTAAA+TGG | - | chr5_2:70541848-70541867 | None:intergenic | 40.0% | |
| ! | GTTGGTTTAGTGGTTGACTT+GGG | + | chr5_2:70541872-70541891 | Msa0785560:intron | 40.0% |
| !!! | TAGTGGTTGACTTGGGATTT+TGG | + | chr5_2:70541879-70541898 | Msa0785560:intron | 40.0% |
| ! | TCAAGGTGCTAGATTCCTTA+TGG | + | chr5_2:70541914-70541933 | Msa0785560:intron | 40.0% |
| TCTAAGGATCGACTAATCTG+AGG | - | chr5_2:70542022-70542041 | None:intergenic | 40.0% | |
| TAAACTCGGTATCCGATCTA+AGG | - | chr5_2:70542038-70542057 | None:intergenic | 40.0% | |
| ACTTGTGACTGATACTACGA+GGG | - | chr5_2:70542456-70542475 | None:intergenic | 40.0% | |
| AACTTGTGACTGATACTACG+AGG | - | chr5_2:70542457-70542476 | None:intergenic | 40.0% | |
| CAGTAAGAAACTTCACCGTA+AGG | + | chr5_2:70542543-70542562 | Msa0785560:CDS | 40.0% | |
| GTGTTGAGTAGAAGAGATGT+TGG | + | chr5_2:70542921-70542940 | Msa0785560:CDS | 40.0% | |
| ! | AAGAGATGTTGGGTGTTATG+CGG | + | chr5_2:70542932-70542951 | Msa0785560:CDS | 40.0% |
| TGGAAGGTAATGCTGAGTTT+CGG | + | chr5_2:70543000-70543019 | Msa0785560:CDS | 40.0% | |
| ! | TGGTCTTGGATATGATCGAA+TGG | + | chr5_2:70543151-70543170 | Msa0785560:CDS | 40.0% |
| TTGGATATGATCGAATGGTG+AGG | + | chr5_2:70543156-70543175 | Msa0785560:CDS | 40.0% | |
| TGATCGAATGGTGAGGTTTA+TGG | + | chr5_2:70543163-70543182 | Msa0785560:CDS | 40.0% | |
| AATGGTGAGGTTTATGGAGA+AGG | + | chr5_2:70543169-70543188 | Msa0785560:CDS | 40.0% | |
| AGAAGGATGATCCGAATTTG+AGG | + | chr5_2:70543186-70543205 | Msa0785560:CDS | 40.0% | |
| TCATACGGATGCCTCAAATT+CGG | - | chr5_2:70543200-70543219 | None:intergenic | 40.0% | |
| ! | ATTTGAGGCATCCGTATGAT+TGG | + | chr5_2:70543201-70543220 | Msa0785560:CDS | 40.0% |
| AAGTGAAGGATCATGAAGAG+TGG | + | chr5_2:70543324-70543343 | Msa0785560:CDS | 40.0% | |
| AGTGAAGGATCATGAAGAGT+GGG | + | chr5_2:70543325-70543344 | Msa0785560:CDS | 40.0% | |
| TGGGAAAAAAGTGAAGCAGT+TGG | + | chr5_2:70543382-70543401 | Msa0785560:CDS | 40.0% | |
| ACTAATGTCCATTGTTGCCA+AGG | - | chr5_2:70543473-70543492 | None:intergenic | 40.0% | |
| CGCTTGACATACACAATATC+AGG | - | chr5_2:70543608-70543627 | None:intergenic | 40.0% | |
| GAGACGTGTACTTATTATGG+TGG | + | chr5_2:70543749-70543768 | Msa0785560:CDS | 40.0% | |
| GTAAAATTTGCACCGGATGA+TGG | - | chr5_2:70543886-70543905 | None:intergenic | 40.0% | |
| TCCGTATACTAAAGAGTGGA+AGG | + | chr5_2:70543907-70543926 | Msa0785560:CDS | 40.0% | |
| GCCTTCCACTCTTTAGTATA+CGG | - | chr5_2:70543911-70543930 | None:intergenic | 40.0% | |
| TAAAGAGTGGAAGGCTAAGT+TGG | + | chr5_2:70543916-70543935 | Msa0785560:CDS | 40.0% | |
| ATTGAGGATGAAGGTAGTGA+CGG | + | chr5_2:70544022-70544041 | Msa0785560:CDS | 40.0% | |
| GGAGATGCTGAATTTGATGA+TGG | + | chr5_2:70544043-70544062 | Msa0785560:CDS | 40.0% | |
| ! | TGATGATGATCAAGAGATGG+AGG | + | chr5_2:70544084-70544103 | Msa0785560:CDS | 40.0% |
| TGCAGACCAAGATCTAGTTA+CGG | + | chr5_2:70544141-70544160 | Msa0785560:CDS | 40.0% | |
| GACATGGAAGAAAGCAAAGA+TGG | + | chr5_2:70544163-70544182 | Msa0785560:CDS | 40.0% | |
| AGATGGTAAATTCCATGCCA+TGG | + | chr5_2:70544180-70544199 | Msa0785560:CDS | 40.0% | |
| CCAACATATTTCCACTCTTC+TGG | - | chr5_2:70544406-70544425 | None:intergenic | 40.0% | |
| CCAGAAGAGTGGAAATATGT+TGG | + | chr5_2:70544403-70544422 | Msa0785560:CDS | 40.0% | |
| ! | ACTAGGCATGCAATTTTGGA+TGG | + | chr5_2:70544538-70544557 | Msa0785560:CDS | 40.0% |
| TTGCAGAGAAAGAGAGGAAG+AGG | + | chr5_2:70541299-70541318 | Msa0785560:intron | 45.0% | |
| GGAAGGAAGAAGAAGGAACA+AGG | + | chr5_2:70541357-70541376 | Msa0785560:intron | 45.0% | |
| GGAAGAAGAAGGAACAAGGA+AGG | + | chr5_2:70541361-70541380 | Msa0785560:intron | 45.0% | |
| AGAAGAAGGAACAAGGAAGG+AGG | + | chr5_2:70541364-70541383 | Msa0785560:intron | 45.0% | |
| !! | TCAGATTCAATTGGTGGTGG+TGG | + | chr5_2:70541390-70541409 | Msa0785560:intron | 45.0% |
| TGACGGAAGAAGGAAGGAAA+AGG | + | chr5_2:70541436-70541455 | Msa0785560:intron | 45.0% | |
| GGAAGGAAAAGGAAGAAGGA+AGG | + | chr5_2:70541447-70541466 | Msa0785560:intron | 45.0% | |
| GAAGGAAGGAGAAGAAGAGA+AGG | + | chr5_2:70541461-70541480 | Msa0785560:intron | 45.0% | |
| !! | TCTTCTGCCGTTTACCGTTT+TGG | - | chr5_2:70541591-70541610 | None:intergenic | 45.0% |
| GGTAAACGGCAGAAGAGATA+AGG | + | chr5_2:70541595-70541614 | Msa0785560:intron | 45.0% | |
| ! | CCCATTTAAAGTTGGTCTGG+TGG | + | chr5_2:70541844-70541863 | Msa0785560:intron | 45.0% |
| !! | GGTGGTTAACGTTGGTTTAG+TGG | + | chr5_2:70541862-70541881 | Msa0785560:intron | 45.0% |
| !! | CGTTGGTTTAGTGGTTGACT+TGG | + | chr5_2:70541871-70541890 | Msa0785560:intron | 45.0% |
| ! | TTTGGAGTGTGTTCCTCTCA+AGG | + | chr5_2:70541897-70541916 | Msa0785560:intron | 45.0% |
| AAGGAATCTAGCACCTTGAG+AGG | - | chr5_2:70541913-70541932 | None:intergenic | 45.0% | |
| CTTATGGAGCCAATTTCGGT+GGG | + | chr5_2:70541930-70541949 | Msa0785560:intron | 45.0% | |
| ! | AGCTTTGCTCTGGCTTAGAA+CGG | + | chr5_2:70541966-70541985 | Msa0785560:intron | 45.0% |
| CTGATACTACGAGGGAAAAG+TGG | - | chr5_2:70542448-70542467 | None:intergenic | 45.0% | |
| ! | TGAGTTGAGTTCAGTGTGAC+TGG | - | chr5_2:70542480-70542499 | None:intergenic | 45.0% |
| ! | AGAGATGTTGGGTGTTATGC+GGG | + | chr5_2:70542933-70542952 | Msa0785560:CDS | 45.0% |
| TCTTCTGGTGGTAGATTGGA+AGG | + | chr5_2:70542984-70543003 | Msa0785560:CDS | 45.0% | |
| GTAATGCTGAGTTTCGGAGA+CGG | + | chr5_2:70543006-70543025 | Msa0785560:CDS | 45.0% | |
| !! | GAGGATTTGTTGCAGCAGAT+TGG | + | chr5_2:70543131-70543150 | Msa0785560:CDS | 45.0% |
| !! | TTGTTGCAGCAGATTGGTCT+TGG | + | chr5_2:70543137-70543156 | Msa0785560:CDS | 45.0% |
| GTGAATATGGGCCGTATTCT+TGG | + | chr5_2:70543234-70543253 | Msa0785560:CDS | 45.0% | |
| ACAATCCCACGCCAAGAATA+CGG | - | chr5_2:70543248-70543267 | None:intergenic | 45.0% | |
| TCATTAGGCATCCAAAGTGG+AGG | + | chr5_2:70543435-70543454 | Msa0785560:CDS | 45.0% | |
| CATTAGGCATCCAAAGTGGA+GGG | + | chr5_2:70543436-70543455 | Msa0785560:CDS | 45.0% | |
| !! | AGTTCTGAAACCCTCCACTT+TGG | - | chr5_2:70543449-70543468 | None:intergenic | 45.0% |
| CAGAACTTCCTTGGCAACAA+TGG | + | chr5_2:70543462-70543481 | Msa0785560:CDS | 45.0% | |
| AGTGAAGTGGTACTTGAAGC+TGG | + | chr5_2:70543494-70543513 | Msa0785560:CDS | 45.0% | |
| TGGACTTTGATGGGAAGACT+TGG | + | chr5_2:70543536-70543555 | Msa0785560:CDS | 45.0% | |
| GGACTTTGATGGGAAGACTT+GGG | + | chr5_2:70543537-70543556 | Msa0785560:CDS | 45.0% | |
| TCAAACCTACACTGGAACAC+TGG | - | chr5_2:70543632-70543651 | None:intergenic | 45.0% | |
| TCCATTTCTTGATCCTCGCA+CGG | + | chr5_2:70543682-70543701 | Msa0785560:CDS | 45.0% | |
| ! | GTTTCTTTTGGGCCATCATC+CGG | + | chr5_2:70543871-70543890 | Msa0785560:CDS | 45.0% |
| ! | GAAGGCTAAGTTGGAAGAGA+TGG | + | chr5_2:70543925-70543944 | Msa0785560:CDS | 45.0% |
| AAGTTGGAAGAGATGGAGCT+TGG | + | chr5_2:70543932-70543951 | Msa0785560:CDS | 45.0% | |
| TGATGATCAAGAGATGGAGG+AGG | + | chr5_2:70544087-70544106 | Msa0785560:CDS | 45.0% | |
| CCATGTCCGTAACTAGATCT+TGG | - | chr5_2:70544150-70544169 | None:intergenic | 45.0% | |
| CCAAGATCTAGTTACGGACA+TGG | + | chr5_2:70544147-70544166 | Msa0785560:CDS | 45.0% | |
| TCACATCTTCTTCCATGGCA+TGG | - | chr5_2:70544195-70544214 | None:intergenic | 45.0% | |
| TGCCATGGAAGAAGATGTGA+AGG | + | chr5_2:70544195-70544214 | Msa0785560:CDS | 45.0% | |
| GCCATGGAAGAAGATGTGAA+GGG | + | chr5_2:70544196-70544215 | Msa0785560:CDS | 45.0% | |
| GAAGCAAATGATGACAGCAG+AGG | + | chr5_2:70544309-70544328 | Msa0785560:CDS | 45.0% | |
| AAATGATGACAGCAGAGGCA+GGG | + | chr5_2:70544314-70544333 | Msa0785560:CDS | 45.0% | |
| GAAACAATGCGTTCAGCAGA+TGG | + | chr5_2:70544340-70544359 | Msa0785560:CDS | 45.0% | |
| ! | CAAAGGTTAGTCCAGAAGAG+TGG | + | chr5_2:70544392-70544411 | Msa0785560:CDS | 45.0% |
| GAGTGGAAATATGTTGGGGT+CGG | + | chr5_2:70544409-70544428 | Msa0785560:CDS | 45.0% | |
| ! | TATTTCTGCGAGCAGCTGTT+CGG | + | chr5_2:70544476-70544495 | Msa0785560:CDS | 45.0% |
| CTAGTGAGTGTGAGCTGAGA+CGG | + | chr5_2:70541158-70541177 | Msa0785560:intron | 50.0% | |
| TAGTGAGTGTGAGCTGAGAC+GGG | + | chr5_2:70541159-70541178 | Msa0785560:intron | 50.0% | |
| TGCCAGAAAGCTATCCACGA+CGG | + | chr5_2:70541202-70541221 | Msa0785560:intron | 50.0% | |
| ACTAACGGGGAGGACCAAAA+CGG | + | chr5_2:70541574-70541593 | Msa0785560:intron | 50.0% | |
| GGGAGGACCAAAACGGTAAA+CGG | + | chr5_2:70541581-70541600 | Msa0785560:intron | 50.0% | |
| ! | GTTGGTCTGGTGGTTAACGT+TGG | + | chr5_2:70541854-70541873 | Msa0785560:intron | 50.0% |
| ! | CCACCGAAATTGGCTCCATA+AGG | - | chr5_2:70541932-70541951 | None:intergenic | 50.0% |
| CCTTATGGAGCCAATTTCGG+TGG | + | chr5_2:70541929-70541948 | Msa0785560:intron | 50.0% | |
| ATGGACTTGCCCACCGAAAT+TGG | - | chr5_2:70541942-70541961 | None:intergenic | 50.0% | |
| GTCCATACAGAGCTTTGCTC+TGG | + | chr5_2:70541956-70541975 | Msa0785560:intron | 50.0% | |
| AGCCAGAGCAAAGCTCTGTA+TGG | - | chr5_2:70541961-70541980 | None:intergenic | 50.0% | |
| ! | GCTTTGCTCTGGCTTAGAAC+GGG | + | chr5_2:70541967-70541986 | Msa0785560:intron | 50.0% |
| ! | CTTTGCTCTGGCTTAGAACG+GGG | + | chr5_2:70541968-70541987 | Msa0785560:intron | 50.0% |
| TAGAACGGGGTCTGACAAGT+AGG | + | chr5_2:70541981-70542000 | Msa0785560:intron | 50.0% | |
| CTACGAGGGAAAAGTGGTAG+CGG | - | chr5_2:70542442-70542461 | None:intergenic | 50.0% | |
| CTGAACTCAACTCAACTGCC+CGG | + | chr5_2:70542486-70542505 | Msa0785560:CDS | 50.0% | |
| CGAACCCGGAGAGTGAATTT+AGG | + | chr5_2:70542877-70542896 | Msa0785560:CDS | 50.0% | |
| TGCGGGTCGTAGTAAGAAGA+CGG | + | chr5_2:70542950-70542969 | Msa0785560:CDS | 50.0% | |
| GTCGTCTTCTGGTGGTAGAT+TGG | + | chr5_2:70542980-70542999 | Msa0785560:CDS | 50.0% | |
| ACGGATGAAGCGTAATGCGA+GGG | + | chr5_2:70543025-70543044 | Msa0785560:CDS | 50.0% | |
| TTGAAAAACCCTAGGGGACG+TGG | + | chr5_2:70543086-70543105 | Msa0785560:CDS | 50.0% | |
| TGAAAAACCCTAGGGGACGT+GGG | + | chr5_2:70543087-70543106 | Msa0785560:CDS | 50.0% | |
| GATAATTCCCACGTCCCCTA+GGG | - | chr5_2:70543097-70543116 | None:intergenic | 50.0% | |
| TAGGGGACGTGGGAATTATC+CGG | + | chr5_2:70543097-70543116 | Msa0785560:CDS | 50.0% | |
| TCTTGGCGTGGGATTGTTGT+TGG | + | chr5_2:70543251-70543270 | Msa0785560:CDS | 50.0% | |
| ! | TGGGATTGTTGTTGGTGAGC+CGG | + | chr5_2:70543259-70543278 | Msa0785560:CDS | 50.0% |
| TCGGTAATCCCACCACTAAC+CGG | - | chr5_2:70543281-70543300 | None:intergenic | 50.0% | |
| GAAGGATCATGAAGAGTGGG+AGG | + | chr5_2:70543328-70543347 | Msa0785560:CDS | 50.0% | |
| GGAGGGTTTCAGAACTTCCT+TGG | + | chr5_2:70543453-70543472 | Msa0785560:CDS | 50.0% | |
| GATGGGAAGACTTGGGAACA+AGG | + | chr5_2:70543544-70543563 | Msa0785560:CDS | 50.0% | |
| CTTGTGGCTCAAACCTACAC+TGG | - | chr5_2:70543640-70543659 | None:intergenic | 50.0% | |
| TCCGTGCGAGGATCAAGAAA+TGG | - | chr5_2:70543686-70543705 | None:intergenic | 50.0% | |
| AGGTAATCTTGTTCCGTGCG+AGG | - | chr5_2:70543698-70543717 | None:intergenic | 50.0% | |
| TGATCAAGAGATGGAGGAGG+AGG | + | chr5_2:70544090-70544109 | Msa0785560:CDS | 50.0% | |
| GCCCTTCACATCTTCTTCCA+TGG | - | chr5_2:70544200-70544219 | None:intergenic | 50.0% | |
| TGGAAGAAGATGTGAAGGGC+TGG | + | chr5_2:70544200-70544219 | Msa0785560:CDS | 50.0% | |
| AGAAGATGTGAAGGGCTGGA+AGG | + | chr5_2:70544204-70544223 | Msa0785560:CDS | 50.0% | |
| TGAAGGGCTGGAAGGAGTTT+CGG | + | chr5_2:70544212-70544231 | Msa0785560:CDS | 50.0% | |
| CAAATGATGACAGCAGAGGC+AGG | + | chr5_2:70544313-70544332 | Msa0785560:CDS | 50.0% | |
| AATGATGACAGCAGAGGCAG+GGG | + | chr5_2:70544315-70544334 | Msa0785560:CDS | 50.0% | |
| GGAGACGAAACCATGTTGAG+AGG | + | chr5_2:70544361-70544380 | Msa0785560:CDS | 50.0% | |
| TGCTCGCTTTCCTCTCAACA+TGG | - | chr5_2:70544374-70544393 | None:intergenic | 50.0% | |
| GTTGAGAGGAAAGCGAGCAA+AGG | + | chr5_2:70544375-70544394 | Msa0785560:CDS | 50.0% | |
| GCTCGCAGAAATAGATCTGG+AGG | - | chr5_2:70544469-70544488 | None:intergenic | 50.0% | |
| GCTGCTCGCAGAAATAGATC+TGG | - | chr5_2:70544472-70544491 | None:intergenic | 50.0% | |
| CAGAAAGCTATCCACGACGG+CGG | + | chr5_2:70541205-70541224 | Msa0785560:intron | 55.0% | |
| !! | TGGTGGTGGTGGATCTGTCA+TGG | + | chr5_2:70541401-70541420 | Msa0785560:intron | 55.0% |
| AACGGGGTCTGACAAGTAGG+CGG | + | chr5_2:70541984-70542003 | Msa0785560:intron | 55.0% | |
| GCGACTGATAGAAACTCCGG+CGG | - | chr5_2:70542517-70542536 | None:intergenic | 55.0% | |
| CCGGCGACTGATAGAAACTC+CGG | - | chr5_2:70542520-70542539 | None:intergenic | 55.0% | |
| CCGGAGTTTCTATCAGTCGC+CGG | + | chr5_2:70542517-70542536 | Msa0785560:CDS | 55.0% | |
| GCGGGTCGTAGTAAGAAGAC+GGG | + | chr5_2:70542951-70542970 | Msa0785560:CDS | 55.0% | |
| GGTCGTAGTAAGAAGACGGG+TGG | + | chr5_2:70542954-70542973 | Msa0785560:CDS | 55.0% | |
| GACGGATGAAGCGTAATGCG+AGG | + | chr5_2:70543024-70543043 | Msa0785560:CDS | 55.0% | |
| GGATAATTCCCACGTCCCCT+AGG | - | chr5_2:70543098-70543117 | None:intergenic | 55.0% | |
| TATGGGCCGTATTCTTGGCG+TGG | + | chr5_2:70543239-70543258 | Msa0785560:CDS | 55.0% | |
| ATGGGCCGTATTCTTGGCGT+GGG | + | chr5_2:70543240-70543259 | Msa0785560:CDS | 55.0% | |
| ! | GTTGTTGGTGAGCCGGTTAG+TGG | + | chr5_2:70543266-70543285 | Msa0785560:CDS | 55.0% |
| TTGGTGAGCCGGTTAGTGGT+GGG | + | chr5_2:70543270-70543289 | Msa0785560:CDS | 55.0% | |
| GAAGACTTGGGAACAAGGCG+AGG | + | chr5_2:70543549-70543568 | Msa0785560:CDS | 55.0% | |
| AGAGATGGAGGAGGAGGATG+AGG | + | chr5_2:70544096-70544115 | Msa0785560:CDS | 55.0% | |
| AATATGTTGGGGTCGGTCCG+TGG | + | chr5_2:70544416-70544435 | Msa0785560:CDS | 55.0% | |
| CGCCGTCGTGGATAGCTTTC+TGG | - | chr5_2:70541207-70541226 | None:intergenic | 60.0% | |
| AAAGCTATCCACGACGGCGG+TGG | + | chr5_2:70541208-70541227 | Msa0785560:intron | 60.0% | |
| ! | GTGGTGGAAGCAACGGTGGT+GGG | + | chr5_2:70541227-70541246 | Msa0785560:intron | 60.0% |
| AGAAACTCCGGCGGCGTTTC+CGG | - | chr5_2:70542508-70542527 | None:intergenic | 60.0% | |
| ATTGGCCCGAAACGCGAACC+CGG | + | chr5_2:70542863-70542882 | Msa0785560:CDS | 60.0% | |
| ACTCTCCGGGTTCGCGTTTC+GGG | - | chr5_2:70542871-70542890 | None:intergenic | 60.0% | |
| CACTCTCCGGGTTCGCGTTT+CGG | - | chr5_2:70542872-70542891 | None:intergenic | 60.0% | |
| ! | GTTGGTGAGCCGGTTAGTGG+TGG | + | chr5_2:70543269-70543288 | Msa0785560:CDS | 60.0% |
| TGGGAACAAGGCGAGGTCGT+TGG | + | chr5_2:70543556-70543575 | Msa0785560:CDS | 60.0% | |
| ! | TGGTAGCGCAATGTGCAGCG+TGG | + | chr5_2:70543576-70543595 | Msa0785560:CDS | 60.0% |
| AGCGGCCAGTGTTCCAGTGT+AGG | + | chr5_2:70543624-70543643 | Msa0785560:CDS | 60.0% | |
| !! | GACGGCGGTGGTGGAAGCAA+CGG | + | chr5_2:70541220-70541239 | Msa0785560:intron | 65.0% |
| !! | GGTGGTGGAAGCAACGGTGG+TGG | + | chr5_2:70541226-70541245 | Msa0785560:intron | 65.0% |
| !! | GTGGAAGCAACGGTGGTGGG+TGG | + | chr5_2:70541230-70541249 | Msa0785560:intron | 65.0% |
| GAAACTCCGGCGGCGTTTCC+GGG | - | chr5_2:70542507-70542526 | None:intergenic | 65.0% | |
| ACGGGTGGTGCGTCGTCTTC+TGG | + | chr5_2:70542969-70542988 | Msa0785560:CDS | 65.0% | |
| GGTGGTGCGTCGTCTTCTGG+TGG | + | chr5_2:70542972-70542991 | Msa0785560:CDS | 65.0% | |
| GCTATCCACGACGGCGGTGG+TGG | + | chr5_2:70541211-70541230 | Msa0785560:intron | 70.0% | |
| TGCTTCCACCACCGCCGTCG+TGG | - | chr5_2:70541219-70541238 | None:intergenic | 70.0% | |
| !! | GGCGGTGGTGGAAGCAACGG+TGG | + | chr5_2:70541223-70541242 | Msa0785560:intron | 70.0% |
| !! | CGGTGGTGGGTGGAGAGCGA+CGG | + | chr5_2:70541240-70541259 | Msa0785560:intron | 70.0% |
| GGTGGGTGGAGAGCGACGGA+CGG | + | chr5_2:70541244-70541263 | Msa0785560:intron | 70.0% | |
| !! | GCGGCGGACGCCGGTTCAAT+GGG | + | chr5_2:70541266-70541285 | Msa0785560:intron | 70.0% |
| CAACTGCCCGGAAACGCCGC+CGG | + | chr5_2:70542498-70542517 | Msa0785560:CDS | 70.0% | |
| GGGTGGAGAGCGACGGACGG+CGG | + | chr5_2:70541247-70541266 | Msa0785560:intron | 75.0% | |
| TGGAGAGCGACGGACGGCGG+CGG | + | chr5_2:70541250-70541269 | Msa0785560:intron | 75.0% | |
| !! | GGCGGCGGACGCCGGTTCAA+TGG | + | chr5_2:70541265-70541284 | Msa0785560:intron | 75.0% |
| ! | CGACGGACGGCGGCGGACGC+CGG | + | chr5_2:70541257-70541276 | Msa0785560:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 70540886 | 70544779 | 70540886 | ID=Msa0785560;Name=Msa0785560 |
| chr5_2 | mRNA | 70540886 | 70544779 | 70540886 | ID=Msa0785560-mRNA-1;Parent=Msa0785560;Name=Msa0785560-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0.5|0.33|0.66|0|0.66|3|197|690 |
| chr5_2 | exon | 70540886 | 70540888 | 70540886 | ID=Msa0785560-mRNA-1:exon:21261;Parent=Msa0785560-mRNA-1 |
| chr5_2 | exon | 70542386 | 70542564 | 70542386 | ID=Msa0785560-mRNA-1:exon:21262;Parent=Msa0785560-mRNA-1 |
| chr5_2 | exon | 70542692 | 70544779 | 70542692 | ID=Msa0785560-mRNA-1:exon:21263;Parent=Msa0785560-mRNA-1 |
| chr5_2 | CDS | 70540886 | 70540888 | 70540886 | ID=Msa0785560-mRNA-1:cds;Parent=Msa0785560-mRNA-1 |
| chr5_2 | CDS | 70542386 | 70542564 | 70542386 | ID=Msa0785560-mRNA-1:cds;Parent=Msa0785560-mRNA-1 |
| chr5_2 | CDS | 70542692 | 70544582 | 70542692 | ID=Msa0785560-mRNA-1:cds;Parent=Msa0785560-mRNA-1 |
| chr5_2 | three_prime_UTR | 70544583 | 70544779 | 70544583 | ID=Msa0785560-mRNA-1:three_prime_utr;Parent=Msa0785560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
