Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422830 | XP_003601876.2 | 94.626 | 428 | 21 | 2 | 1 | 428 | 1 | 426 | 0.0 | 831 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422830 | sp|A1L4V7|DCYD2_ARATH | 58.134 | 418 | 159 | 6 | 8 | 421 | 22 | 427 | 1.97e-170 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422830 | G7J2M0 | 94.626 | 428 | 21 | 2 | 1 | 428 | 1 | 426 | 0.0 | 831 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0422830 | 0.808500 | 3.004823e-50 | -8.615850e-47 |
| Msa0002540 | Msa0422830 | 0.805282 | 1.439382e-49 | -8.615850e-47 |
| Msa0016670 | Msa0422830 | 0.803091 | 4.113347e-49 | -8.615850e-47 |
| Msa0032840 | Msa0422830 | -0.811116 | 8.223658e-51 | -8.615850e-47 |
| Msa0041620 | Msa0422830 | 0.802087 | 6.626004e-49 | -8.615850e-47 |
| Msa0046750 | Msa0422830 | 0.800022 | 1.751710e-48 | -8.615850e-47 |
| Msa0053110 | Msa0422830 | 0.816845 | 4.483277e-52 | -8.615850e-47 |
| Msa0072810 | Msa0422830 | 0.805031 | 1.624255e-49 | -8.615850e-47 |
| Msa0073670 | Msa0422830 | 0.810765 | 9.796090e-51 | -8.615850e-47 |
| Msa0090590 | Msa0422830 | 0.807622 | 4.619635e-50 | -8.615850e-47 |
| Msa0095380 | Msa0422830 | 0.800573 | 1.352435e-48 | -8.615850e-47 |
| Msa0096670 | Msa0422830 | 0.805204 | 1.494449e-49 | -8.615850e-47 |
| Msa0103000 | Msa0422830 | 0.810680 | 1.021963e-50 | -8.615850e-47 |
| Msa0109950 | Msa0422830 | 0.812547 | 4.013968e-51 | -8.615850e-47 |
| Msa0143080 | Msa0422830 | 0.824245 | 8.959276e-54 | -8.615850e-47 |
| Msa0143430 | Msa0422830 | 0.805451 | 1.326794e-49 | -8.615850e-47 |
| Msa0172350 | Msa0422830 | 0.814405 | 1.566948e-51 | -8.615850e-47 |
| Msa0183620 | Msa0422830 | 0.810419 | 1.163460e-50 | -8.615850e-47 |
| Msa0183830 | Msa0422830 | 0.810707 | 1.008269e-50 | -8.615850e-47 |
| Msa0194970 | Msa0422830 | 0.805178 | 1.513341e-49 | -8.615850e-47 |
| Msa0230550 | Msa0422830 | -0.803014 | 4.265747e-49 | -8.615850e-47 |
| Msa0236980 | Msa0422830 | 0.829408 | 5.235003e-55 | -8.615850e-47 |
| Msa0369570 | Msa0422830 | 0.802337 | 5.886053e-49 | -8.615850e-47 |
| Msa0378080 | Msa0422830 | 0.805817 | 1.111731e-49 | -8.615850e-47 |
| Msa0393950 | Msa0422830 | 0.800325 | 1.519330e-48 | -8.615850e-47 |
| Msa0419820 | Msa0422830 | 0.800824 | 1.202209e-48 | -8.615850e-47 |
| Msa0422830 | Msa0422850 | 0.805641 | 1.209956e-49 | -8.615850e-47 |
| Msa0422830 | Msa0422910 | 0.997225 | 6.632177e-239 | -8.615850e-47 |
| Msa0422830 | Msa0436280 | -0.818053 | 2.395344e-52 | -8.615850e-47 |
| Msa0422830 | Msa0441800 | 0.800934 | 1.141796e-48 | -8.615850e-47 |
| Msa0422830 | Msa0521880 | 0.834206 | 3.426896e-56 | -8.615850e-47 |
| Msa0422830 | Msa0525340 | 0.800054 | 1.725066e-48 | -8.615850e-47 |
| Msa0422830 | Msa0526710 | 0.807160 | 5.789280e-50 | -8.615850e-47 |
| Msa0422830 | Msa0532330 | 0.806212 | 9.181041e-50 | -8.615850e-47 |
| Msa0422830 | Msa0546840 | 0.802261 | 6.100773e-49 | -8.615850e-47 |
| Msa0422830 | Msa0547140 | 0.800842 | 1.191896e-48 | -8.615850e-47 |
| Msa0422830 | Msa0560470 | 0.800139 | 1.658237e-48 | -8.615850e-47 |
| Msa0422830 | Msa0574890 | 0.800582 | 1.346823e-48 | -8.615850e-47 |
| Msa0422830 | Msa0590680 | 0.828159 | 1.049501e-54 | -8.615850e-47 |
| Msa0422830 | Msa0591060 | 0.803954 | 2.724307e-49 | -8.615850e-47 |
| Msa0422830 | Msa0591770 | 0.839129 | 1.906126e-57 | -8.615850e-47 |
| Msa0422830 | Msa0654540 | 0.802414 | 5.673715e-49 | -8.615850e-47 |
| Msa0422830 | Msa0669850 | 0.816057 | 6.727635e-52 | -8.615850e-47 |
| Msa0422830 | Msa0677290 | 0.816118 | 6.519019e-52 | -8.615850e-47 |
| Msa0422830 | Msa0692080 | 0.820146 | 8.002454e-53 | -8.615850e-47 |
| Msa0422830 | Msa0696620 | 0.800930 | 1.143961e-48 | -8.615850e-47 |
| Msa0422830 | Msa0747780 | 0.809098 | 2.238376e-50 | -8.615850e-47 |
| Msa0422830 | Msa0755340 | 0.811028 | 8.590482e-51 | -8.615850e-47 |
| Msa0422830 | Msa0761580 | 0.800471 | 1.419294e-48 | -8.615850e-47 |
| Msa0422830 | Msa0778320 | 0.801184 | 1.014906e-48 | -8.615850e-47 |
| Msa0422830 | Msa0785560 | 0.804662 | 1.940026e-49 | -8.615850e-47 |
| Msa0422830 | Msa0797120 | 0.805652 | 1.203868e-49 | -8.615850e-47 |
| Msa0422830 | Msa0842230 | 0.808981 | 2.371062e-50 | -8.615850e-47 |
| Msa0422830 | Msa0845750 | 0.834980 | 2.190315e-56 | -8.615850e-47 |
| Msa0422830 | Msa0847080 | 0.818670 | 1.736578e-52 | -8.615850e-47 |
| Msa0422830 | Msa0872310 | 0.821631 | 3.644297e-53 | -8.615850e-47 |
| Msa0422830 | Msa0890250 | 0.813077 | 3.071979e-51 | -8.615850e-47 |
| Msa0422830 | Msa0900630 | 0.805825 | 1.107350e-49 | -8.615850e-47 |
| Msa0422830 | Msa0905550 | 0.809698 | 1.663465e-50 | -8.615850e-47 |
| Msa0422830 | Msa0930780 | 0.813491 | 2.491207e-51 | -8.615850e-47 |
| Msa0422830 | Msa0937550 | 0.820101 | 8.194664e-53 | -8.615850e-47 |
| Msa0422830 | Msa0941730 | 0.803880 | 2.822757e-49 | -8.615850e-47 |
| Msa0422830 | Msa0965860 | 0.804638 | 1.962103e-49 | -8.615850e-47 |
| Msa0422830 | Msa0996080 | 0.805749 | 1.148567e-49 | -8.615850e-47 |
| Msa0422830 | Msa1012700 | 0.807709 | 4.428320e-50 | -8.615850e-47 |
| Msa0422830 | Msa1012810 | 0.806538 | 7.836647e-50 | -8.615850e-47 |
| Msa0422830 | Msa1018790 | 0.806780 | 6.964548e-50 | -8.615850e-47 |
| Msa0422830 | Msa1049510 | -0.809492 | 1.842211e-50 | -8.615850e-47 |
| Msa0422830 | Msa1082700 | 0.824367 | 8.389961e-54 | -8.615850e-47 |
| Msa0422830 | Msa1126510 | 0.802364 | 5.809189e-49 | -8.615850e-47 |
| Msa0422830 | Msa1127890 | 0.809364 | 1.962596e-50 | -8.615850e-47 |
| Msa0422830 | Msa1134110 | 0.829155 | 6.029426e-55 | -8.615850e-47 |
| Msa0422830 | Msa1165870 | 0.804909 | 1.722596e-49 | -8.615850e-47 |
| Msa0422830 | Msa1193950 | -0.804780 | 1.833066e-49 | -8.615850e-47 |
| Msa0422830 | Msa1237030 | 0.806626 | 7.508666e-50 | -8.615850e-47 |
| Msa0422830 | Msa1269580 | -0.819514 | 1.115702e-52 | -8.615850e-47 |
| Msa0422830 | Msa1284520 | 0.808904 | 2.462401e-50 | -8.615850e-47 |
| Msa0422830 | Msa1362510 | 0.818561 | 1.838102e-52 | -8.615850e-47 |
| Msa0422830 | Msa1367880 | 0.802679 | 5.003803e-49 | -8.615850e-47 |
| Msa0422830 | Msa1382310 | 0.831975 | 1.230737e-55 | -8.615850e-47 |
| Msa0422830 | Msa1390310 | 0.819068 | 1.410169e-52 | -8.615850e-47 |
| Msa0422830 | Msa1429250 | 0.801934 | 7.124301e-49 | -8.615850e-47 |
| Msa0422830 | Msa1429360 | -0.815319 | 9.827519e-52 | -8.615850e-47 |
| Msa0264570 | Msa0422830 | 0.802290 | 6.019361e-49 | -8.615850e-47 |
| Msa0267760 | Msa0422830 | 0.812251 | 4.656618e-51 | -8.615850e-47 |
| Msa0308830 | Msa0422830 | 0.802934 | 4.432591e-49 | -8.615850e-47 |
| Msa0328210 | Msa0422830 | 0.840973 | 6.295647e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422830 | MtrunA17_Chr3g0123371 | 92.623 | 244 | 16 | 2 | 1 | 244 | 1 | 242 | 1.08e-163 | 461 |
| Msa0422830 | MtrunA17_Chr3g0123381 | 96.970 | 165 | 5 | 0 | 264 | 428 | 1 | 165 | 5.10e-116 | 336 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422830 | AT3G26115.1 | 58.134 | 418 | 159 | 6 | 8 | 421 | 22 | 427 | 2.00e-171 | 487 |
| Msa0422830 | AT3G26115.3 | 62.963 | 351 | 117 | 4 | 73 | 421 | 5 | 344 | 6.57e-163 | 462 |
| Msa0422830 | AT3G26115.2 | 62.963 | 351 | 117 | 4 | 73 | 421 | 5 | 344 | 6.57e-163 | 462 |
| Msa0422830 | AT3G26115.4 | 58.485 | 330 | 123 | 5 | 21 | 346 | 35 | 354 | 1.13e-134 | 392 |
| Msa0422830 | AT3G26115.5 | 59.797 | 296 | 106 | 4 | 128 | 421 | 18 | 302 | 1.38e-124 | 363 |
Find 101 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAATAACTTGATGAATTT+TGG | 0.113989 | 3_2:+72340577 | None:intergenic |
| TTCTAGATTTGGCAATATTT+TGG | 0.158592 | 3_2:-72336228 | Msa0422830:intron |
| TCAAATAATGTAATTTCTTT+TGG | 0.173224 | 3_2:-72335951 | Msa0422830:three_prime_UTR |
| TTGAACACAAATCCAGATTT+TGG | 0.179164 | 3_2:-72340524 | Msa0422830:CDS |
| GCTTCCATTTGCATAAAATT+TGG | 0.188543 | 3_2:+72339268 | None:intergenic |
| TCTATAACATCTTACTTTCT+TGG | 0.200155 | 3_2:+72337777 | None:intergenic |
| GGAGGCACATTGGGCTTGTT+TGG | 0.235639 | 3_2:-72336059 | Msa0422830:CDS |
| TTATAGCCAGTCAAGATTTC+AGG | 0.282652 | 3_2:+72339460 | None:intergenic |
| CTGTTGGCGTAAACATTTCT+TGG | 0.300656 | 3_2:+72339400 | None:intergenic |
| TTGTTGCACCCGCTGATTAA+TGG | 0.301555 | 3_2:-72340443 | Msa0422830:CDS |
| TAGGACAGAACCATTGTTTC+CGG | 0.305021 | 3_2:+72339342 | None:intergenic |
| CCTCCTAAGTGAGGAGTCTA+TGG | 0.307589 | 3_2:-72340642 | Msa0422830:CDS |
| TTCTTTGTATAGGTATTATT+CGG | 0.317658 | 3_2:-72338225 | Msa0422830:intron |
| CAAGAAATGTTTACGCCAAC+AGG | 0.321119 | 3_2:-72339399 | Msa0422830:CDS |
| GAGGCACATTGGGCTTGTTT+GGG | 0.331209 | 3_2:-72336058 | Msa0422830:CDS |
| AACTTGATGTCTACAATATA+CGG | 0.331391 | 3_2:-72339439 | Msa0422830:CDS |
| GGACTTGCAGCACTTTGCTT+AGG | 0.335904 | 3_2:-72338106 | Msa0422830:CDS |
| TGGTAATAAAGCAAGAAAAT+TGG | 0.340129 | 3_2:-72340423 | Msa0422830:CDS |
| TCCTCACTTAGGAGGAGTTT+TGG | 0.345728 | 3_2:+72340650 | None:intergenic |
| ACATTGCCATTACCAAAATC+TGG | 0.350689 | 3_2:+72340512 | None:intergenic |
| CACATTGGGCTTGTTTGGGT+TGG | 0.353121 | 3_2:-72336054 | Msa0422830:CDS |
| CTTCATACTGGAGGCACATT+GGG | 0.385183 | 3_2:-72336068 | Msa0422830:CDS |
| CCACTAGAATACCAGTTTGC+TGG | 0.406758 | 3_2:+72336174 | None:intergenic |
| GTGAAGTTTGTTGTGGATGC+TGG | 0.420790 | 3_2:-72338154 | Msa0422830:CDS |
| AATTGATGGGTACCGAAAAC+AGG | 0.432157 | 3_2:-72337904 | Msa0422830:CDS |
| GGTGATTCTGTTGCTCTACT+AGG | 0.439298 | 3_2:-72339190 | Msa0422830:intron |
| TTTGTTGTGGATGCTGGTAC+TGG | 0.444120 | 3_2:-72338148 | Msa0422830:CDS |
| GACTTGCAGCACTTTGCTTA+GGG | 0.444275 | 3_2:-72338105 | Msa0422830:intron |
| CAGCAAATTGCCCAGCAAAC+TGG | 0.448004 | 3_2:-72336185 | Msa0422830:CDS |
| TGTCTACACATTAGCTGCTT+GGG | 0.449660 | 3_2:-72336147 | Msa0422830:CDS |
| CTTTAGCATTTCTTCCCTGT+TGG | 0.450134 | 3_2:+72339384 | None:intergenic |
| CACGATGTAAACAAAGATGA+TGG | 0.462326 | 3_2:-72337828 | Msa0422830:CDS |
| AGTGCCCACACAGCTGCTAT+TGG | 0.463165 | 3_2:-72339665 | Msa0422830:intron |
| TTGTCGCAGAATCATTTACT+TGG | 0.469233 | 3_2:-72338190 | Msa0422830:CDS |
| TGCTTCTGTGCAGACTCCCA+TGG | 0.469456 | 3_2:-72337956 | Msa0422830:intron |
| CTTTATTACCATTAATCAGC+GGG | 0.489787 | 3_2:+72340435 | None:intergenic |
| ATCATTTACTTGGGAAACAA+AGG | 0.490526 | 3_2:-72338180 | Msa0422830:CDS |
| GAAGTGGTGATGCTTCATAC+TGG | 0.490583 | 3_2:-72336080 | Msa0422830:CDS |
| GAATGAAGACAGAGCAGAAG+TGG | 0.491181 | 3_2:-72336096 | Msa0422830:CDS |
| AGTTATTCATAAACATGGAC+TGG | 0.493891 | 3_2:-72340564 | Msa0422830:CDS |
| CACTAGAATACCAGTTTGCT+GGG | 0.498244 | 3_2:+72336175 | None:intergenic |
| CTGTCTACACATTAGCTGCT+TGG | 0.498673 | 3_2:-72336148 | Msa0422830:CDS |
| AAATAAATAAAAGTAATTTG+TGG | 0.500577 | 3_2:+72335831 | None:intergenic |
| ATGCTGGCTGATAAAATTGA+TGG | 0.508131 | 3_2:-72337918 | Msa0422830:CDS |
| TAACATCTTACTTTCTTGGA+TGG | 0.510447 | 3_2:+72337781 | None:intergenic |
| GAAACAATGGTTCTGTCCTA+TGG | 0.515150 | 3_2:-72339339 | Msa0422830:CDS |
| GTTTAAAATAAGTGAAGTTG+TGG | 0.515905 | 3_2:+72335763 | None:intergenic |
| CAAGCAGCTAATGTGTAGAC+AGG | 0.521364 | 3_2:+72336149 | None:intergenic |
| CCATAGACTCCTCACTTAGG+AGG | 0.522174 | 3_2:+72340642 | None:intergenic |
| AAGATGATGGGATTGTGCAC+TGG | 0.522667 | 3_2:-72337815 | Msa0422830:CDS |
| GGCACAACAGCAGTTGGTAT+AGG | 0.525800 | 3_2:-72338127 | Msa0422830:CDS |
| TTAATTGTCAATGAAGGGGC+TGG | 0.526047 | 3_2:-72339211 | Msa0422830:CDS |
| TTTCCATAGACTCCTCACTT+AGG | 0.529788 | 3_2:+72340639 | None:intergenic |
| GGCACTCTGACAACCTCCAC+AGG | 0.529946 | 3_2:+72339682 | None:intergenic |
| GCTTCATACTGGAGGCACAT+TGG | 0.536337 | 3_2:-72336069 | Msa0422830:CDS |
| CATCAAGTTATTCATAAACA+TGG | 0.536859 | 3_2:-72340569 | Msa0422830:CDS |
| AGCTATGCCGAGTCAGTGGC+CGG | 0.538289 | 3_2:-72339361 | Msa0422830:CDS |
| TCATTTACTTGGGAAACAAA+GGG | 0.538446 | 3_2:-72338179 | Msa0422830:CDS |
| GAATGATATCACTGAACCAT+AGG | 0.540099 | 3_2:+72339323 | None:intergenic |
| AATAAAGCAAGAAAATTGGA+TGG | 0.546969 | 3_2:-72340419 | Msa0422830:CDS |
| ATTGTTTCCGGCCACTGACT+CGG | 0.547238 | 3_2:+72339354 | None:intergenic |
| GCTTCTGTGCAGACTCCCAT+GGG | 0.548103 | 3_2:-72337955 | Msa0422830:intron |
| TGTCGCAGAATCATTTACTT+GGG | 0.550672 | 3_2:-72338189 | Msa0422830:CDS |
| GAGCAGCCTGAAATCTTGAC+TGG | 0.552886 | 3_2:-72339466 | Msa0422830:CDS |
| CACATTAGCTGCTTGGGAAG+CGG | 0.554018 | 3_2:-72336141 | Msa0422830:CDS |
| GACTTTATAATCATGAAGCA+AGG | 0.554313 | 3_2:+72340388 | None:intergenic |
| AGATGATGGGATTGTGCACT+GGG | 0.557894 | 3_2:-72337814 | Msa0422830:CDS |
| ATGACTGCATATACCTCCCA+TGG | 0.564868 | 3_2:+72337939 | None:intergenic |
| GGAGGTATATGCAGTCATGC+TGG | 0.575564 | 3_2:-72337934 | Msa0422830:CDS |
| GAGTCAGTGGCCGGAAACAA+TGG | 0.576023 | 3_2:-72339352 | Msa0422830:CDS |
| TACTGAATACTACAAAGTCA+TGG | 0.593143 | 3_2:+72335787 | None:intergenic |
| CCTACCAATAGCAGCTGTGT+GGG | 0.594418 | 3_2:+72339661 | None:intergenic |
| ACGATGTAAACAAAGATGAT+GGG | 0.599833 | 3_2:-72337827 | Msa0422830:CDS |
| GCTTGTTTGGGTTGGCACAG+AGG | 0.603118 | 3_2:-72336046 | Msa0422830:CDS |
| GTTATTCATAAACATGGACT+GGG | 0.608725 | 3_2:-72340563 | Msa0422830:CDS |
| CATCATCTTTGTTTACATCG+TGG | 0.609610 | 3_2:+72337829 | None:intergenic |
| AAGGGCTGTGAAGTTTGTTG+TGG | 0.613607 | 3_2:-72338161 | Msa0422830:CDS |
| AAAGAGCTATGCCGAGTCAG+TGG | 0.614125 | 3_2:-72339365 | Msa0422830:CDS |
| GCTGTTCTGTGTGCTGAGAG+AGG | 0.614335 | 3_2:-72339517 | Msa0422830:CDS |
| CTCTTCGCTAGAAAGAAGCA+TGG | 0.618633 | 3_2:+72336118 | None:intergenic |
| CCAGCAAACTGGTATTCTAG+TGG | 0.620364 | 3_2:-72336174 | Msa0422830:CDS |
| ACTTTATAATCATGAAGCAA+GGG | 0.622788 | 3_2:+72340389 | None:intergenic |
| AGCCACGACTTACCCCTACA+AGG | 0.623494 | 3_2:+72335912 | None:intergenic |
| GCTTTATTACCATTAATCAG+CGG | 0.623719 | 3_2:+72340434 | None:intergenic |
| ACCTACCAATAGCAGCTGTG+TGG | 0.624875 | 3_2:+72339660 | None:intergenic |
| TGATTATAAAGTCACTGATG+TGG | 0.625747 | 3_2:-72340378 | Msa0422830:intron |
| TGCTGGCTGATAAAATTGAT+GGG | 0.627219 | 3_2:-72337917 | Msa0422830:CDS |
| AATGGAAGCTAGTCAAAGTG+AGG | 0.628363 | 3_2:-72339254 | Msa0422830:CDS |
| GGTACTGGCACAACAGCAGT+TGG | 0.628373 | 3_2:-72338133 | Msa0422830:CDS |
| AAGAAATGTTTACGCCAACA+GGG | 0.631071 | 3_2:-72339398 | Msa0422830:CDS |
| TACCTTGTAGGGGTAAGTCG+TGG | 0.637635 | 3_2:-72335914 | Msa0422830:three_prime_UTR |
| TCTGTGCAGACTCCCATGGG+AGG | 0.637900 | 3_2:-72337952 | Msa0422830:intron |
| ACCAAAACTCCTCCTAAGTG+AGG | 0.648746 | 3_2:-72340651 | Msa0422830:CDS |
| AAAAGTTACTCAACAGAACG+TGG | 0.653642 | 3_2:-72340619 | Msa0422830:CDS |
| ATGTTGAAATCGATAAACAA+AGG | 0.654558 | 3_2:-72340493 | Msa0422830:CDS |
| TGACTGCATATACCTCCCAT+GGG | 0.661084 | 3_2:+72337940 | None:intergenic |
| ATGGAAGCTAGTCAAAGTGA+GGG | 0.664903 | 3_2:-72339253 | Msa0422830:CDS |
| GTGGTGATGCTTCATACTGG+AGG | 0.678053 | 3_2:-72336077 | Msa0422830:CDS |
| ATTCATAAACATGGACTGGG+AGG | 0.691026 | 3_2:-72340560 | Msa0422830:CDS |
| TGATGGGATTGTGCACTGGG+TGG | 0.714319 | 3_2:-72337811 | Msa0422830:CDS |
| ATGTCACATCTGCTTCTACG+AGG | 0.730665 | 3_2:-72339490 | Msa0422830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTACTATTCTTTATTTTAT+TGG | - | chr3_2:72336257-72336276 | Msa0422830:intron | 10.0% |
| !! | TTCTTATTATATACTATTAA+TGG | - | chr3_2:72336436-72336455 | Msa0422830:intron | 10.0% |
| !! | TCTTATTATATACTATTAAT+GGG | - | chr3_2:72336437-72336456 | Msa0422830:intron | 10.0% |
| !!! | GAACAATAAATTAATATTTT+TGG | - | chr3_2:72337647-72337666 | Msa0422830:intron | 10.0% |
| !!! | TTTTATTTAATTCTACAAAT+TGG | - | chr3_2:72338257-72338276 | Msa0422830:intron | 10.0% |
| !!! | TTTTTTTTCTTTCTTTTTTA+TGG | - | chr3_2:72338813-72338832 | Msa0422830:intron | 10.0% |
| !! | GAAAATAAATAAAAAACAAA+AGG | + | chr3_2:72340693-72340712 | None:intergenic | 10.0% |
| !! | AAATAAATAAAAGTAATTTG+TGG | + | chr3_2:72340736-72340755 | None:intergenic | 10.0% |
| !!! | AGTAAATTTTGCAATTAATA+AGG | + | chr3_2:72336548-72336567 | None:intergenic | 15.0% |
| !!! | TAATACTACTTTTCATATAA+TGG | - | chr3_2:72337008-72337027 | Msa0422830:intron | 15.0% |
| !! | GAAAATTTAATATATAAGTG+AGG | - | chr3_2:72337551-72337570 | Msa0422830:intron | 15.0% |
| !! | TCAATAATATCTTTCATATA+TGG | + | chr3_2:72337615-72337634 | None:intergenic | 15.0% |
| !! | TAATAAGATTTAGTTAAGAA+CGG | + | chr3_2:72337800-72337819 | None:intergenic | 15.0% |
| !! | TTGATATATATTGTTGTAAT+TGG | - | chr3_2:72338025-72338044 | Msa0422830:intron | 15.0% |
| !! | TTCTTAATAAATGATAATCA+AGG | + | chr3_2:72338148-72338167 | None:intergenic | 15.0% |
| !! | GATTATCATTTATTAAGAAT+AGG | - | chr3_2:72338149-72338168 | Msa0422830:CDS | 15.0% |
| !!! | AAAATGTTATTTCTTTGTAT+AGG | - | chr3_2:72338329-72338348 | Msa0422830:intron | 15.0% |
| !!! | ATAGATTTTTTTAGTAGTAA+GGG | - | chr3_2:72339229-72339248 | Msa0422830:CDS | 15.0% |
| !! | ATCATAAAAAACTAATCAAA+TGG | + | chr3_2:72339436-72339455 | None:intergenic | 15.0% |
| !! | GTTCATATAAATATAAAAGA+AGG | + | chr3_2:72339664-72339683 | None:intergenic | 15.0% |
| !!! | TCAAATAATGTAATTTCTTT+TGG | - | chr3_2:72340613-72340632 | Msa0422830:CDS | 15.0% |
| !!! | CAAATAATGTAATTTCTTTT+GGG | - | chr3_2:72340614-72340633 | Msa0422830:CDS | 15.0% |
| !!! | TATTTTATTATTTACCTTGT+AGG | - | chr3_2:72340638-72340657 | Msa0422830:CDS | 15.0% |
| !!! | ATTTTATTATTTACCTTGTA+GGG | - | chr3_2:72340639-72340658 | Msa0422830:CDS | 15.0% |
| !! | TAAATAAAAAACAAAAGGAA+TGG | + | chr3_2:72340688-72340707 | None:intergenic | 15.0% |
| !!! | ATGAATAACTTGATGAATTT+TGG | + | chr3_2:72335990-72336009 | None:intergenic | 20.0% |
| !!! | GAATTAAAGGCTTAATTTTT+GGG | + | chr3_2:72336340-72336359 | None:intergenic | 20.0% |
| !!! | TGAATTAAAGGCTTAATTTT+TGG | + | chr3_2:72336341-72336360 | None:intergenic | 20.0% |
| !! | AAAAAGTGAGTTAACTTTAA+CGG | - | chr3_2:72336502-72336521 | Msa0422830:intron | 20.0% |
| !! | ATTATAAATATCTCAGATTG+TGG | - | chr3_2:72336675-72336694 | Msa0422830:intron | 20.0% |
| !! | TTATAAATATCTCAGATTGT+GGG | - | chr3_2:72336676-72336695 | Msa0422830:intron | 20.0% |
| !! | TATGATAAGGAACAAATTAA+AGG | + | chr3_2:72336775-72336794 | None:intergenic | 20.0% |
| !!! | AAGATTTTAATTGTCAATGA+AGG | - | chr3_2:72337347-72337366 | Msa0422830:intron | 20.0% |
| !!! | AGATTTTAATTGTCAATGAA+GGG | - | chr3_2:72337348-72337367 | Msa0422830:intron | 20.0% |
| !! | AAATACAGATAACTTTATCT+AGG | + | chr3_2:72337526-72337545 | None:intergenic | 20.0% |
| !! | TATGAAAGATATTATTGAAC+AGG | - | chr3_2:72337617-72337636 | Msa0422830:intron | 20.0% |
| !! | ATATATTGTTGTAATTGGAA+TGG | - | chr3_2:72338030-72338049 | Msa0422830:intron | 20.0% |
| !! | ATAAATGATAATCAAGGAAA+AGG | + | chr3_2:72338142-72338161 | None:intergenic | 20.0% |
| !! | TCATTTATTAAGAATAGGAT+AGG | - | chr3_2:72338154-72338173 | Msa0422830:CDS | 20.0% |
| !! | TGAAATTCAGTTAACTTTAA+TGG | - | chr3_2:72338283-72338302 | Msa0422830:intron | 20.0% |
| !! | TTCTTTGTATAGGTATTATT+CGG | - | chr3_2:72338339-72338358 | Msa0422830:intron | 20.0% |
| !!! | GTTTTTAACCATATTAGAAA+AGG | - | chr3_2:72338556-72338575 | Msa0422830:intron | 20.0% |
| !!! | TCATATATCCTTTTCTAATA+TGG | + | chr3_2:72338567-72338586 | None:intergenic | 20.0% |
| !! | TACTAAAAAAATCTATCCTT+CGG | + | chr3_2:72339225-72339244 | None:intergenic | 20.0% |
| !!! | GATAGATTTTTTTAGTAGTA+AGG | - | chr3_2:72339228-72339247 | Msa0422830:CDS | 20.0% |
| !! | AGTTTAAATTTACCTATTTG+AGG | + | chr3_2:72339363-72339382 | None:intergenic | 20.0% |
| !! | GTTTATGATAAATCTACAAT+GGG | - | chr3_2:72340064-72340083 | Msa0422830:intron | 20.0% |
| !!! | TTTATTTGAAAAAGGCATAT+TGG | + | chr3_2:72340141-72340160 | None:intergenic | 20.0% |
| !! | CACTTGTATTTATTTGAAAA+AGG | + | chr3_2:72340149-72340168 | None:intergenic | 20.0% |
| !!! | TTTTATTATTTACCTTGTAG+GGG | - | chr3_2:72340640-72340659 | Msa0422830:CDS | 20.0% |
| ! | CATCAAGTTATTCATAAACA+TGG | - | chr3_2:72335995-72336014 | Msa0422830:CDS | 25.0% |
| ! | ATGTTGAAATCGATAAACAA+AGG | - | chr3_2:72336071-72336090 | Msa0422830:CDS | 25.0% |
| ! | TGGTAATAAAGCAAGAAAAT+TGG | - | chr3_2:72336141-72336160 | Msa0422830:CDS | 25.0% |
| ! | AATAAAGCAAGAAAATTGGA+TGG | - | chr3_2:72336145-72336164 | Msa0422830:CDS | 25.0% |
| ! | ACTTTATAATCATGAAGCAA+GGG | + | chr3_2:72336178-72336197 | None:intergenic | 25.0% |
| ! | AAAACTAAACATTGTTGTGA+AGG | + | chr3_2:72336220-72336239 | None:intergenic | 25.0% |
| !! | CTTGACTGATAATGAATTAA+AGG | + | chr3_2:72336353-72336372 | None:intergenic | 25.0% |
| !! | TAATTTTATTGCTAAACCAG+TGG | + | chr3_2:72336483-72336502 | None:intergenic | 25.0% |
| ! | AAAAGTGAGTTAACTTTAAC+GGG | - | chr3_2:72336503-72336522 | Msa0422830:intron | 25.0% |
| !! | TGTTGAATGTTATTTGATCT+TGG | + | chr3_2:72336844-72336863 | None:intergenic | 25.0% |
| ! | AACTTGATGTCTACAATATA+CGG | - | chr3_2:72337125-72337144 | Msa0422830:intron | 25.0% |
| !! | TTCTCCAAATTTTATGCAAA+TGG | - | chr3_2:72337292-72337311 | Msa0422830:intron | 25.0% |
| !! | CAATTAAAATCTTTTGACGA+TGG | + | chr3_2:72337340-72337359 | None:intergenic | 25.0% |
| !!! | GATTTTAATTGTCAATGAAG+GGG | - | chr3_2:72337349-72337368 | Msa0422830:intron | 25.0% |
| ! | AAAACAACAAAGCATATCTT+TGG | - | chr3_2:72337418-72337437 | Msa0422830:intron | 25.0% |
| ! | AAACAACAAAGCATATCTTT+GGG | - | chr3_2:72337419-72337438 | Msa0422830:intron | 25.0% |
| ! | TAGGTAAAAATCTAGATATG+AGG | - | chr3_2:72337458-72337477 | Msa0422830:intron | 25.0% |
| ! | AGGTAAAAATCTAGATATGA+GGG | - | chr3_2:72337459-72337478 | Msa0422830:intron | 25.0% |
| !! | TGTTTGGTTCATATTGATAA+TGG | + | chr3_2:72337580-72337599 | None:intergenic | 25.0% |
| !!! | ACAGTAGTTTTAAGAAGAAA+AGG | + | chr3_2:72338005-72338024 | None:intergenic | 25.0% |
| ! | TAACTGATTGATAAGTTTCT+AGG | + | chr3_2:72338218-72338237 | None:intergenic | 25.0% |
| ! | TTAACTTTAATGGTTTGATG+TGG | - | chr3_2:72338293-72338312 | Msa0422830:intron | 25.0% |
| ! | TCTATAACATCTTACTTTCT+TGG | + | chr3_2:72338790-72338809 | None:intergenic | 25.0% |
| !!! | TTTGTTTGCGCTTTTTTATA+GGG | + | chr3_2:72339132-72339151 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGCGCTTTTTTAT+AGG | + | chr3_2:72339133-72339152 | None:intergenic | 25.0% |
| !! | ATAAAAAAGCGCAAACAAAA+AGG | - | chr3_2:72339133-72339152 | Msa0422830:intron | 25.0% |
| !! | TAAAAAAGCGCAAACAAAAA+GGG | - | chr3_2:72339134-72339153 | Msa0422830:intron | 25.0% |
| !!! | TACACTATTGGTTTTTGTTT+GGG | + | chr3_2:72339270-72339289 | None:intergenic | 25.0% |
| !!! | TTACACTATTGGTTTTTGTT+TGG | + | chr3_2:72339271-72339290 | None:intergenic | 25.0% |
| !!! | TTAGTTTTTTATGATCTGCT+AGG | - | chr3_2:72339441-72339460 | Msa0422830:CDS | 25.0% |
| ! | TACTGAGCATTCATTATTAA+AGG | + | chr3_2:72339511-72339530 | None:intergenic | 25.0% |
| !!! | TATAGAAGTTTAAGTTGTGA+AGG | - | chr3_2:72339551-72339570 | Msa0422830:intron | 25.0% |
| !! | TATAGAAGTTTAAGATGTGA+AGG | - | chr3_2:72339596-72339615 | Msa0422830:intron | 25.0% |
| ! | ACTTCTTACTATTTCACTAA+AGG | + | chr3_2:72339713-72339732 | None:intergenic | 25.0% |
| !! | AGAAGATCCATACTTTTAAA+AGG | - | chr3_2:72339923-72339942 | Msa0422830:intron | 25.0% |
| !!! | GAAGATCCATACTTTTAAAA+GGG | - | chr3_2:72339924-72339943 | Msa0422830:intron | 25.0% |
| ! | GGTTTATGATAAATCTACAA+TGG | - | chr3_2:72340063-72340082 | Msa0422830:intron | 25.0% |
| ! | ATTGGCATTACAAATTACAA+AGG | + | chr3_2:72340123-72340142 | None:intergenic | 25.0% |
| ! | AGTTATTGTTACCAACAAAA+CGG | + | chr3_2:72340223-72340242 | None:intergenic | 25.0% |
| !!! | TTTTGTTGGTAACAATAACT+AGG | - | chr3_2:72340223-72340242 | Msa0422830:intron | 25.0% |
| ! | TTTATCTAGATGATACAAAG+AGG | + | chr3_2:72340269-72340288 | None:intergenic | 25.0% |
| ! | TATGAACGAACATTTATAGT+TGG | - | chr3_2:72340306-72340325 | Msa0422830:intron | 25.0% |
| !! | TTCTAGATTTGGCAATATTT+TGG | - | chr3_2:72340336-72340355 | Msa0422830:intron | 25.0% |
| !!! | CAGAGGTACAAAAATTATTT+TGG | - | chr3_2:72340535-72340554 | Msa0422830:CDS | 25.0% |
| !!! | ATTTATTTTCGACAAAGTTG+TGG | - | chr3_2:72340703-72340722 | Msa0422830:intron | 25.0% |
| !! | GTTTAAAATAAGTGAAGTTG+TGG | + | chr3_2:72340804-72340823 | None:intergenic | 25.0% |
| ACAATCATTCTTAGTTAGTG+AGG | + | chr3_2:72335826-72335845 | None:intergenic | 30.0% | |
| CTAAGAATGATTGTTATAGC+TGG | - | chr3_2:72335832-72335851 | Msa0422830:three_prime_UTR | 30.0% | |
| GAAATTACCTATCAAAGGAA+AGG | + | chr3_2:72335890-72335909 | None:intergenic | 30.0% | |
| GTTTCGAAATTACCTATCAA+AGG | + | chr3_2:72335895-72335914 | None:intergenic | 30.0% | |
| !!! | CTTGATGAATTTTGGTTTCA+GGG | + | chr3_2:72335982-72336001 | None:intergenic | 30.0% |
| !!! | ACTTGATGAATTTTGGTTTC+AGG | + | chr3_2:72335983-72336002 | None:intergenic | 30.0% |
| AGTTATTCATAAACATGGAC+TGG | - | chr3_2:72336000-72336019 | Msa0422830:CDS | 30.0% | |
| GTTATTCATAAACATGGACT+GGG | - | chr3_2:72336001-72336020 | Msa0422830:CDS | 30.0% | |
| ! | TTGAACACAAATCCAGATTT+TGG | - | chr3_2:72336040-72336059 | Msa0422830:CDS | 30.0% |
| !! | ACAAATCCAGATTTTGGTAA+TGG | - | chr3_2:72336046-72336065 | Msa0422830:CDS | 30.0% |
| ! | ACAAAGGAAAAGCTTTTATG+TGG | - | chr3_2:72336087-72336106 | Msa0422830:CDS | 30.0% |
| CTTTATTACCATTAATCAGC+GGG | + | chr3_2:72336132-72336151 | None:intergenic | 30.0% | |
| ! | GCTTTATTACCATTAATCAG+CGG | + | chr3_2:72336133-72336152 | None:intergenic | 30.0% |
| GACTTTATAATCATGAAGCA+AGG | + | chr3_2:72336179-72336198 | None:intergenic | 30.0% | |
| TGATTATAAAGTCACTGATG+TGG | - | chr3_2:72336186-72336205 | Msa0422830:CDS | 30.0% | |
| ATTATCAGTCAAGACTCAAA+AGG | - | chr3_2:72336360-72336379 | Msa0422830:intron | 30.0% | |
| TTATCAGTCAAGACTCAAAA+GGG | - | chr3_2:72336361-72336380 | Msa0422830:intron | 30.0% | |
| ! | AAAGGGTTTTCAGTAAAATC+AGG | - | chr3_2:72336378-72336397 | Msa0422830:intron | 30.0% |
| ! | AAATCACTAGGAGTATGATA+AGG | + | chr3_2:72336788-72336807 | None:intergenic | 30.0% |
| CTAAAATCAATTTCATTGCG+TGG | + | chr3_2:72336816-72336835 | None:intergenic | 30.0% | |
| !! | CACGCAATGAAATTGATTTT+AGG | - | chr3_2:72336814-72336833 | Msa0422830:intron | 30.0% |
| ! | ATTCAACAACGACATTTTCT+AGG | - | chr3_2:72336856-72336875 | Msa0422830:intron | 30.0% |
| ! | GTAGGTAATTTTCTGAGTTA+TGG | - | chr3_2:72336921-72336940 | Msa0422830:intron | 30.0% |
| GCTTCCATTTGCATAAAATT+TGG | + | chr3_2:72337299-72337318 | None:intergenic | 30.0% | |
| ATGGTATGAAATGAGATGTT+TGG | + | chr3_2:72337596-72337615 | None:intergenic | 30.0% | |
| ! | TTTTGGTATTAATAACCCTC+CGG | - | chr3_2:72337664-72337683 | Msa0422830:intron | 30.0% |
| TGTAAGGTTCTTGAAAAGTA+AGG | + | chr3_2:72337973-72337992 | None:intergenic | 30.0% | |
| CTCATAATTACACACTATCA+TGG | + | chr3_2:72338106-72338125 | None:intergenic | 30.0% | |
| ! | CATGATAGTGTGTAATTATG+AGG | - | chr3_2:72338104-72338123 | Msa0422830:intron | 30.0% |
| ! | TTCGACAAGAGTATATATGT+TGG | - | chr3_2:72338184-72338203 | Msa0422830:CDS | 30.0% |
| ! | ATTGATAAGTTTCTAGGTAC+AGG | + | chr3_2:72338212-72338231 | None:intergenic | 30.0% |
| ATCATTTACTTGGGAAACAA+AGG | - | chr3_2:72338384-72338403 | Msa0422830:intron | 30.0% | |
| TCATTTACTTGGGAAACAAA+GGG | - | chr3_2:72338385-72338404 | Msa0422830:intron | 30.0% | |
| TTTACTGCTACTATTCATGT+TGG | - | chr3_2:72338533-72338552 | Msa0422830:intron | 30.0% | |
| TTACTGCTACTATTCATGTT+GGG | - | chr3_2:72338534-72338553 | Msa0422830:intron | 30.0% | |
| ACGATGTAAACAAAGATGAT+GGG | - | chr3_2:72338737-72338756 | Msa0422830:intron | 30.0% | |
| TAACATCTTACTTTCTTGGA+TGG | + | chr3_2:72338786-72338805 | None:intergenic | 30.0% | |
| AAGAAGAGGATATTGTGTTA+GGG | + | chr3_2:72338977-72338996 | None:intergenic | 30.0% | |
| AAAGAAGAGGATATTGTGTT+AGG | + | chr3_2:72338978-72338997 | None:intergenic | 30.0% | |
| TTAGTATAGCAGAAAAGAAG+AGG | + | chr3_2:72338991-72339010 | None:intergenic | 30.0% | |
| ! | AAAAAAGCGCAAACAAAAAG+GGG | - | chr3_2:72339135-72339154 | Msa0422830:intron | 30.0% |
| !!! | ATTTTTTTAGTAGTAAGGGC+AGG | - | chr3_2:72339233-72339252 | Msa0422830:CDS | 30.0% |
| !!! | TTTTTTTAGTAGTAAGGGCA+GGG | - | chr3_2:72339234-72339253 | Msa0422830:CDS | 30.0% |
| AAAACCAATAGTGTAAAGAC+AGG | - | chr3_2:72339275-72339294 | Msa0422830:CDS | 30.0% | |
| TAAACCTGTCTTTACACTAT+TGG | + | chr3_2:72339282-72339301 | None:intergenic | 30.0% | |
| CTTCAGTAGAAAATGTAACA+AGG | + | chr3_2:72339393-72339412 | None:intergenic | 30.0% | |
| ! | CTTGTTACATTTTCTACTGA+AGG | - | chr3_2:72339391-72339410 | Msa0422830:CDS | 30.0% |
| ! | TTAAAAGCGTAATATGCTGA+CGG | + | chr3_2:72339742-72339761 | None:intergenic | 30.0% |
| ! | AAATTGTTTTCCAAGAGAGA+TGG | - | chr3_2:72339772-72339791 | Msa0422830:intron | 30.0% |
| AAGCATGTTTCACTTAAAAC+AGG | - | chr3_2:72339828-72339847 | Msa0422830:intron | 30.0% | |
| !!! | CATACTTTTAAAAGGGTGTT+GGG | - | chr3_2:72339931-72339950 | Msa0422830:intron | 30.0% |
| TCAGGTCTAAATCATAGAAT+CGG | - | chr3_2:72340002-72340021 | Msa0422830:intron | 30.0% | |
| GCAAATAGTATAAGACAAGA+CGG | - | chr3_2:72340042-72340061 | Msa0422830:intron | 30.0% | |
| AAATGTAAGGGTTTAAGGAA+GGG | + | chr3_2:72340095-72340114 | None:intergenic | 30.0% | |
| AAAATGTAAGGGTTTAAGGA+AGG | + | chr3_2:72340096-72340115 | None:intergenic | 30.0% | |
| ! | TTCCTTAAACCCTTACATTT+TGG | - | chr3_2:72340095-72340114 | Msa0422830:intron | 30.0% |
| ! | TTGGTCTCTTTTTCTAGATT+TGG | - | chr3_2:72340325-72340344 | Msa0422830:intron | 30.0% |
| !! | AGATTTGGCAATATTTTGGA+TGG | - | chr3_2:72340340-72340359 | Msa0422830:intron | 30.0% |
| !! | GATTTGGCAATATTTTGGAT+GGG | - | chr3_2:72340341-72340360 | Msa0422830:intron | 30.0% |
| !! | ATTTGGCAATATTTTGGATG+GGG | - | chr3_2:72340342-72340361 | Msa0422830:intron | 30.0% |
| TGGCAAGCTAAAAAATGATT+TGG | - | chr3_2:72340555-72340574 | Msa0422830:CDS | 30.0% | |
| AAAAAACAAAAGGAATGGTG+TGG | + | chr3_2:72340683-72340702 | None:intergenic | 30.0% | |
| TACTGAATACTACAAAGTCA+TGG | + | chr3_2:72340780-72340799 | None:intergenic | 30.0% | |
| ACCTATCAAAGGAAAGGAAA+GGG | + | chr3_2:72335884-72335903 | None:intergenic | 35.0% | |
| TACCTATCAAAGGAAAGGAA+AGG | + | chr3_2:72335885-72335904 | None:intergenic | 35.0% | |
| AAAAGTTACTCAACAGAACG+TGG | - | chr3_2:72335945-72335964 | Msa0422830:three_prime_UTR | 35.0% | |
| ACATTGCCATTACCAAAATC+TGG | + | chr3_2:72336055-72336074 | None:intergenic | 35.0% | |
| GGGAACAAGTATATGAAATC+TGG | + | chr3_2:72336320-72336339 | None:intergenic | 35.0% | |
| ! | TTCCTTTTGAGCAAGAATCT+TGG | - | chr3_2:72336402-72336421 | Msa0422830:intron | 35.0% |
| AACCAAGATTCTTGCTCAAA+AGG | + | chr3_2:72336407-72336426 | None:intergenic | 35.0% | |
| TTTGCCATAAACAACTGAAG+TGG | - | chr3_2:72336581-72336600 | Msa0422830:intron | 35.0% | |
| GATACCACTTCAGTTGTTTA+TGG | + | chr3_2:72336588-72336607 | None:intergenic | 35.0% | |
| ! | CTTCAAAGCTCAAGTTGTAA+AGG | - | chr3_2:72336645-72336664 | Msa0422830:intron | 35.0% |
| TTGTTTCCTGCAGTCATAAA+GGG | - | chr3_2:72336725-72336744 | Msa0422830:intron | 35.0% | |
| TTATAGCCAGTCAAGATTTC+AGG | + | chr3_2:72337107-72337126 | None:intergenic | 35.0% | |
| AAGAAATGTTTACGCCAACA+GGG | - | chr3_2:72337166-72337185 | Msa0422830:intron | 35.0% | |
| GAATGATATCACTGAACCAT+AGG | + | chr3_2:72337244-72337263 | None:intergenic | 35.0% | |
| !! | TCTACTAGGTAATGGGAAAT+TGG | - | chr3_2:72337388-72337407 | Msa0422830:intron | 35.0% |
| ! | GGGAACATTTTCTCTTTACT+AGG | - | chr3_2:72337439-72337458 | Msa0422830:intron | 35.0% |
| GACTAAAGATTGTTTCAGTC+AGG | - | chr3_2:72337747-72337766 | Msa0422830:intron | 35.0% | |
| !! | TAGTTAAGAACGGATTGTTC+AGG | + | chr3_2:72337790-72337809 | None:intergenic | 35.0% |
| ! | GAAAAGGTTGTGATGATGTA+AGG | + | chr3_2:72337989-72338008 | None:intergenic | 35.0% |
| TTGTCGCAGAATCATTTACT+TGG | - | chr3_2:72338374-72338393 | Msa0422830:intron | 35.0% | |
| TGTCGCAGAATCATTTACTT+GGG | - | chr3_2:72338375-72338394 | Msa0422830:intron | 35.0% | |
| ! | ATGCTGGCTGATAAAATTGA+TGG | - | chr3_2:72338646-72338665 | Msa0422830:intron | 35.0% |
| ! | TGCTGGCTGATAAAATTGAT+GGG | - | chr3_2:72338647-72338666 | Msa0422830:intron | 35.0% |
| ! | CATCATCTTTGTTTACATCG+TGG | + | chr3_2:72338738-72338757 | None:intergenic | 35.0% |
| CACGATGTAAACAAAGATGA+TGG | - | chr3_2:72338736-72338755 | Msa0422830:intron | 35.0% | |
| ATTTGAGAGTAAGGAAGGTT+TGG | + | chr3_2:72338949-72338968 | None:intergenic | 35.0% | |
| AATTCCAAAGAAAGAAGGTG+AGG | + | chr3_2:72339058-72339077 | None:intergenic | 35.0% | |
| !! | CACCTTCTTTCTTTGGAATT+AGG | - | chr3_2:72339058-72339077 | Msa0422830:intron | 35.0% |
| GACCTAATTCCAAAGAAAGA+AGG | + | chr3_2:72339063-72339082 | None:intergenic | 35.0% | |
| ! | AAAAAGCGCAAACAAAAAGG+GGG | - | chr3_2:72339136-72339155 | Msa0422830:intron | 35.0% |
| !!! | TTTTTTAGTAGTAAGGGCAG+GGG | - | chr3_2:72339235-72339254 | Msa0422830:CDS | 35.0% |
| TCTTAGTTGTGTCCTCAAAT+AGG | - | chr3_2:72339348-72339367 | Msa0422830:CDS | 35.0% | |
| CAGTAGAAAATGTAACAAGG+AGG | + | chr3_2:72339390-72339409 | None:intergenic | 35.0% | |
| ATAATGAATGCTCAGTAGTC+AGG | - | chr3_2:72339514-72339533 | Msa0422830:CDS | 35.0% | |
| TTAAGATGTGAAGGCAAACA+TGG | - | chr3_2:72339605-72339624 | Msa0422830:intron | 35.0% | |
| TACTATGATCACTTCTGTGA+GGG | + | chr3_2:72339690-72339709 | None:intergenic | 35.0% | |
| ATAGTCATGCATCATGATCT+AGG | - | chr3_2:72339805-72339824 | Msa0422830:intron | 35.0% | |
| !! | CCAACACCCTTTTAAAAGTA+TGG | + | chr3_2:72339933-72339952 | None:intergenic | 35.0% |
| !! | CCATACTTTTAAAAGGGTGT+TGG | - | chr3_2:72339930-72339949 | Msa0422830:intron | 35.0% |
| ! | AGAGTTGCTGATCTAGAATT+AGG | - | chr3_2:72339977-72339996 | Msa0422830:intron | 35.0% |
| GATTCTATGATTTAGACCTG+AGG | + | chr3_2:72340003-72340022 | None:intergenic | 35.0% | |
| AGCCAAAATGTAAGGGTTTA+AGG | + | chr3_2:72340100-72340119 | None:intergenic | 35.0% | |
| ACAAAGGAGCCAAAATGTAA+GGG | + | chr3_2:72340107-72340126 | None:intergenic | 35.0% | |
| TACAAAGGAGCCAAAATGTA+AGG | + | chr3_2:72340108-72340127 | None:intergenic | 35.0% | |
| !! | TGTTGGTAACAATAACTAGG+TGG | - | chr3_2:72340226-72340245 | Msa0422830:intron | 35.0% |
| !! | CAATATTTTGGATGGGGAAA+TGG | - | chr3_2:72340348-72340367 | Msa0422830:intron | 35.0% |
| ACCCTTTCCTTTCCTTTGAT+AGG | - | chr3_2:72335880-72335899 | Msa0422830:three_prime_UTR | 40.0% | |
| TTTCCATAGACTCCTCACTT+AGG | + | chr3_2:72335928-72335947 | None:intergenic | 40.0% | |
| !! | ATTCATAAACATGGACTGGG+AGG | - | chr3_2:72336004-72336023 | Msa0422830:CDS | 40.0% |
| ! | GTTGTTTCCTGCAGTCATAA+AGG | - | chr3_2:72336724-72336743 | Msa0422830:intron | 40.0% |
| TGTTTCCTGCAGTCATAAAG+GGG | - | chr3_2:72336726-72336745 | Msa0422830:intron | 40.0% | |
| ! | GACATTTTCTAGGTTACCTG+TGG | - | chr3_2:72336866-72336885 | Msa0422830:intron | 40.0% |
| ! | ATTTTCTAGGTTACCTGTGG+AGG | - | chr3_2:72336869-72336888 | Msa0422830:intron | 40.0% |
| CTGTTGGCGTAAACATTTCT+TGG | + | chr3_2:72337167-72337186 | None:intergenic | 40.0% | |
| CAAGAAATGTTTACGCCAAC+AGG | - | chr3_2:72337165-72337184 | Msa0422830:intron | 40.0% | |
| CTTTAGCATTTCTTCCCTGT+TGG | + | chr3_2:72337183-72337202 | None:intergenic | 40.0% | |
| TAGGACAGAACCATTGTTTC+CGG | + | chr3_2:72337225-72337244 | None:intergenic | 40.0% | |
| ! | GAAACAATGGTTCTGTCCTA+TGG | - | chr3_2:72337225-72337244 | Msa0422830:intron | 40.0% |
| AATGGAAGCTAGTCAAAGTG+AGG | - | chr3_2:72337310-72337329 | Msa0422830:intron | 40.0% | |
| ATGGAAGCTAGTCAAAGTGA+GGG | - | chr3_2:72337311-72337330 | Msa0422830:intron | 40.0% | |
| TTAATTGTCAATGAAGGGGC+TGG | - | chr3_2:72337353-72337372 | Msa0422830:intron | 40.0% | |
| TCTGTTGCTCTACTAGGTAA+TGG | - | chr3_2:72337380-72337399 | Msa0422830:intron | 40.0% | |
| CTGTTGCTCTACTAGGTAAT+GGG | - | chr3_2:72337381-72337400 | Msa0422830:intron | 40.0% | |
| ACCAAATTCCAGATTACCAG+GGG | + | chr3_2:72337706-72337725 | None:intergenic | 40.0% | |
| GACCAAATTCCAGATTACCA+GGG | + | chr3_2:72337707-72337726 | None:intergenic | 40.0% | |
| ! | CTGGTAATCTGGAATTTGGT+CGG | - | chr3_2:72337706-72337725 | Msa0422830:intron | 40.0% |
| ! | TGGTAATCTGGAATTTGGTC+GGG | - | chr3_2:72337707-72337726 | Msa0422830:intron | 40.0% |
| TTTCAGTCAGGATTTGAACC+CGG | - | chr3_2:72337759-72337778 | Msa0422830:intron | 40.0% | |
| TCAATTTGCAACCAAGCGAT+TGG | + | chr3_2:72337834-72337853 | None:intergenic | 40.0% | |
| !! | AATTGATGGGTACCGAAAAC+AGG | - | chr3_2:72338660-72338679 | Msa0422830:intron | 40.0% |
| ! | TCAAGCGCTTTTCCTGTTTT+CGG | + | chr3_2:72338675-72338694 | None:intergenic | 40.0% |
| AGGAGAGAACTACACTATGA+AGG | + | chr3_2:72338921-72338940 | None:intergenic | 40.0% | |
| AGAGGATATTGTGTTAGGGT+GGG | + | chr3_2:72338973-72338992 | None:intergenic | 40.0% | |
| AAGAGGATATTGTGTTAGGG+TGG | + | chr3_2:72338974-72338993 | None:intergenic | 40.0% | |
| CTATCCTCACCTTCTTTCTT+TGG | - | chr3_2:72339051-72339070 | Msa0422830:intron | 40.0% | |
| GAGACAGAAAGAATTGCATC+AGG | + | chr3_2:72339091-72339110 | None:intergenic | 40.0% | |
| GTCTCACATTTGAGTCCAAT+AGG | - | chr3_2:72339106-72339125 | Msa0422830:intron | 40.0% | |
| !!! | CGCTTTTTTATAGGGCCTAT+TGG | + | chr3_2:72339124-72339143 | None:intergenic | 40.0% |
| TCTGGACAATTTATGTGACC+TGG | - | chr3_2:72339188-72339207 | Msa0422830:intron | 40.0% | |
| GCTTGAAACTAAAGACAGTG+GGG | + | chr3_2:72339308-72339327 | None:intergenic | 40.0% | |
| GGCTTGAAACTAAAGACAGT+GGG | + | chr3_2:72339309-72339328 | None:intergenic | 40.0% | |
| AGGCTTGAAACTAAAGACAG+TGG | + | chr3_2:72339310-72339329 | None:intergenic | 40.0% | |
| ! | CTTTAGTTTCAAGCCTGCTT+TGG | - | chr3_2:72339314-72339333 | Msa0422830:CDS | 40.0% |
| ACTATGATCACTTCTGTGAG+GGG | + | chr3_2:72339689-72339708 | None:intergenic | 40.0% | |
| GTACTATGATCACTTCTGTG+AGG | + | chr3_2:72339691-72339710 | None:intergenic | 40.0% | |
| GATGCATGACTATCCAAACA+CGG | + | chr3_2:72339798-72339817 | None:intergenic | 40.0% | |
| !! | TCGTATTTTTGTGACCTTGC+AGG | + | chr3_2:72339886-72339905 | None:intergenic | 40.0% |
| !!! | ACTTTTAAAAGGGTGTTGGG+AGG | - | chr3_2:72339934-72339953 | Msa0422830:intron | 40.0% |
| !!! | CTTTTAAAAGGGTGTTGGGA+GGG | - | chr3_2:72339935-72339954 | Msa0422830:intron | 40.0% |
| ATCAGCAACTCTAACCATCA+TGG | + | chr3_2:72339969-72339988 | None:intergenic | 40.0% | |
| !!! | TCACACTTATGCCGTTTTGT+TGG | - | chr3_2:72340209-72340228 | Msa0422830:intron | 40.0% |
| ! | CACTAGAATACCAGTTTGCT+GGG | + | chr3_2:72340392-72340411 | None:intergenic | 40.0% |
| TGTCTACACATTAGCTGCTT+GGG | - | chr3_2:72340417-72340436 | Msa0422830:CDS | 40.0% | |
| ! | GATTCGTTCAAGCGCTTTTC+AGG | - | chr3_2:72335764-72335783 | Msa0422830:three_prime_UTR | 45.0% |
| ! | TTCAGGTTCGCTTTCTCACT+AGG | - | chr3_2:72335781-72335800 | Msa0422830:three_prime_UTR | 45.0% |
| ACCAAAACTCCTCCTAAGTG+AGG | - | chr3_2:72335913-72335932 | Msa0422830:three_prime_UTR | 45.0% | |
| ! | TCCTCACTTAGGAGGAGTTT+TGG | + | chr3_2:72335917-72335936 | None:intergenic | 45.0% |
| ! | TTGTTGCACCCGCTGATTAA+TGG | - | chr3_2:72336121-72336140 | Msa0422830:CDS | 45.0% |
| GTGGACAAACAGGAATTAGC+AGG | + | chr3_2:72336464-72336483 | None:intergenic | 45.0% | |
| GCTAATTCCTGTTTGTCCAC+TGG | - | chr3_2:72336464-72336483 | Msa0422830:intron | 45.0% | |
| TGCTAAACCAGTGGACAAAC+AGG | + | chr3_2:72336474-72336493 | None:intergenic | 45.0% | |
| TGCGTGGTCGAAAAATCACT+AGG | + | chr3_2:72336800-72336819 | None:intergenic | 45.0% | |
| ATGTCACATCTGCTTCTACG+AGG | - | chr3_2:72337074-72337093 | Msa0422830:intron | 45.0% | |
| GGTGATTCTGTTGCTCTACT+AGG | - | chr3_2:72337374-72337393 | Msa0422830:intron | 45.0% | |
| AGGGCTTGATCAAGTGATAG+TGG | - | chr3_2:72337478-72337497 | Msa0422830:intron | 45.0% | |
| CGACCAAATTCCAGATTACC+AGG | + | chr3_2:72337708-72337727 | None:intergenic | 45.0% | |
| ! | ACGGATTGTTCAGGAGAAAC+CGG | + | chr3_2:72337781-72337800 | None:intergenic | 45.0% |
| !! | AAGGGCTGTGAAGTTTGTTG+TGG | - | chr3_2:72338403-72338422 | Msa0422830:intron | 45.0% |
| !! | GTGAAGTTTGTTGTGGATGC+TGG | - | chr3_2:72338410-72338429 | Msa0422830:intron | 45.0% |
| ! | TTTGTTGTGGATGCTGGTAC+TGG | - | chr3_2:72338416-72338435 | Msa0422830:intron | 45.0% |
| GACTTGCAGCACTTTGCTTA+GGG | - | chr3_2:72338459-72338478 | Msa0422830:intron | 45.0% | |
| TGACTGCATATACCTCCCAT+GGG | + | chr3_2:72338627-72338646 | None:intergenic | 45.0% | |
| ATGACTGCATATACCTCCCA+TGG | + | chr3_2:72338628-72338647 | None:intergenic | 45.0% | |
| !! | AAGATGATGGGATTGTGCAC+TGG | - | chr3_2:72338749-72338768 | Msa0422830:intron | 45.0% |
| !! | AGATGATGGGATTGTGCACT+GGG | - | chr3_2:72338750-72338769 | Msa0422830:intron | 45.0% |
| TCTAGTTGCTGCAAAGTCTG+TGG | + | chr3_2:72338849-72338868 | None:intergenic | 45.0% | |
| AGATACCCCCAATGAGTCAA+TGG | - | chr3_2:72338893-72338912 | Msa0422830:intron | 45.0% | |
| !! | AAGGAGCCATTGACTCATTG+GGG | + | chr3_2:72338902-72338921 | None:intergenic | 45.0% |
| !! | GAAGGAGCCATTGACTCATT+GGG | + | chr3_2:72338903-72338922 | None:intergenic | 45.0% |
| !! | TGAAGGAGCCATTGACTCAT+TGG | + | chr3_2:72338904-72338923 | None:intergenic | 45.0% |
| !! | GTAAGGAAGGTTTGGCTTTG+AGG | + | chr3_2:72338941-72338960 | None:intergenic | 45.0% |
| TGGGGATTTGAGAGTAAGGA+AGG | + | chr3_2:72338954-72338973 | None:intergenic | 45.0% | |
| GAGGATATTGTGTTAGGGTG+GGG | + | chr3_2:72338972-72338991 | None:intergenic | 45.0% | |
| GAAAGAATTGCATCAGGTGC+TGG | + | chr3_2:72339085-72339104 | None:intergenic | 45.0% | |
| TCAAGCCTGCTTTGGTTGTA+AGG | - | chr3_2:72339322-72339341 | Msa0422830:CDS | 45.0% | |
| GAGTTCCTTACAACCAAAGC+AGG | + | chr3_2:72339330-72339349 | None:intergenic | 45.0% | |
| TGATCTGCTAGGATGCTAGA+AGG | - | chr3_2:72339452-72339471 | Msa0422830:CDS | 45.0% | |
| CAATAAGCATAGCTCCTGCA+AGG | - | chr3_2:72339869-72339888 | Msa0422830:intron | 45.0% | |
| ! | CTGATCTAGAATTAGGCCTC+AGG | - | chr3_2:72339984-72340003 | Msa0422830:intron | 45.0% |
| CCACTAGAATACCAGTTTGC+TGG | + | chr3_2:72340393-72340412 | None:intergenic | 45.0% | |
| CCAGCAAACTGGTATTCTAG+TGG | - | chr3_2:72340390-72340409 | Msa0422830:CDS | 45.0% | |
| CAAGCAGCTAATGTGTAGAC+AGG | + | chr3_2:72340418-72340437 | None:intergenic | 45.0% | |
| CTGTCTACACATTAGCTGCT+TGG | - | chr3_2:72340416-72340435 | Msa0422830:CDS | 45.0% | |
| CTCTTCGCTAGAAAGAAGCA+TGG | + | chr3_2:72340449-72340468 | None:intergenic | 45.0% | |
| GAATGAAGACAGAGCAGAAG+TGG | - | chr3_2:72340468-72340487 | Msa0422830:CDS | 45.0% | |
| ! | GAAGTGGTGATGCTTCATAC+TGG | - | chr3_2:72340484-72340503 | Msa0422830:CDS | 45.0% |
| ! | CTTCATACTGGAGGCACATT+GGG | - | chr3_2:72340496-72340515 | Msa0422830:CDS | 45.0% |
| CCATAGACTCCTCACTTAGG+AGG | + | chr3_2:72335925-72335944 | None:intergenic | 50.0% | |
| CCTCCTAAGTGAGGAGTCTA+TGG | - | chr3_2:72335922-72335941 | Msa0422830:three_prime_UTR | 50.0% | |
| TCCTGCAGTCATAAAGGGGA+AGG | - | chr3_2:72336730-72336749 | Msa0422830:intron | 50.0% | |
| CCTGCAGTCATAAAGGGGAA+GGG | - | chr3_2:72336731-72336750 | Msa0422830:intron | 50.0% | |
| CTGCAGTCATAAAGGGGAAG+GGG | - | chr3_2:72336732-72336751 | Msa0422830:intron | 50.0% | |
| TGCAGTCATAAAGGGGAAGG+GGG | - | chr3_2:72336733-72336752 | Msa0422830:intron | 50.0% | |
| CCTACCAATAGCAGCTGTGT+GGG | + | chr3_2:72336906-72336925 | None:intergenic | 50.0% | |
| ACCTACCAATAGCAGCTGTG+TGG | + | chr3_2:72336907-72336926 | None:intergenic | 50.0% | |
| GAGCAGCCTGAAATCTTGAC+TGG | - | chr3_2:72337098-72337117 | Msa0422830:intron | 50.0% | |
| AAAGAGCTATGCCGAGTCAG+TGG | - | chr3_2:72337199-72337218 | Msa0422830:intron | 50.0% | |
| ! | ATTGTTTCCGGCCACTGACT+CGG | + | chr3_2:72337213-72337232 | None:intergenic | 50.0% |
| ! | GCCCCTGGTAATCTGGAATT+TGG | - | chr3_2:72337702-72337721 | Msa0422830:intron | 50.0% |
| ! | ATCTGGAATTTGGTCGGGAG+AGG | - | chr3_2:72337712-72337731 | Msa0422830:intron | 50.0% |
| CGGATTGTTCAGGAGAAACC+GGG | + | chr3_2:72337780-72337799 | None:intergenic | 50.0% | |
| ACCACTTGAGTCCAATCGCT+TGG | - | chr3_2:72337820-72337839 | Msa0422830:CDS | 50.0% | |
| ACCAAGCGATTGGACTCAAG+TGG | + | chr3_2:72337824-72337843 | None:intergenic | 50.0% | |
| ! | GGCACAACAGCAGTTGGTAT+AGG | - | chr3_2:72338437-72338456 | Msa0422830:intron | 50.0% |
| GGACTTGCAGCACTTTGCTT+AGG | - | chr3_2:72338458-72338477 | Msa0422830:intron | 50.0% | |
| TTGCAGCACTTTGCTTAGGG+TGG | - | chr3_2:72338462-72338481 | Msa0422830:intron | 50.0% | |
| TGCAGCACTTTGCTTAGGGT+GGG | - | chr3_2:72338463-72338482 | Msa0422830:intron | 50.0% | |
| ! | GGAGGTATATGCAGTCATGC+TGG | - | chr3_2:72338630-72338649 | Msa0422830:intron | 50.0% |
| !! | AGGAGCCATTGACTCATTGG+GGG | + | chr3_2:72338901-72338920 | None:intergenic | 50.0% |
| AGGGTGGGGATTTGAGAGTA+AGG | + | chr3_2:72338958-72338977 | None:intergenic | 50.0% | |
| ! | TCCAGATGCACTGATGTCGA+GGG | + | chr3_2:72339174-72339193 | None:intergenic | 50.0% |
| !! | TTAAAAGGGTGTTGGGAGGG+AGG | - | chr3_2:72339938-72339957 | Msa0422830:intron | 50.0% |
| CAGCAAATTGCCCAGCAAAC+TGG | - | chr3_2:72340379-72340398 | Msa0422830:CDS | 50.0% | |
| CACATTAGCTGCTTGGGAAG+CGG | - | chr3_2:72340423-72340442 | Msa0422830:CDS | 50.0% | |
| ! | GTGGTGATGCTTCATACTGG+AGG | - | chr3_2:72340487-72340506 | Msa0422830:CDS | 50.0% |
| ! | GCTTCATACTGGAGGCACAT+TGG | - | chr3_2:72340495-72340514 | Msa0422830:CDS | 50.0% |
| ! | GAGGCACATTGGGCTTGTTT+GGG | - | chr3_2:72340506-72340525 | Msa0422830:CDS | 50.0% |
| ! | CACATTGGGCTTGTTTGGGT+TGG | - | chr3_2:72340510-72340529 | Msa0422830:CDS | 50.0% |
| TACCTTGTAGGGGTAAGTCG+TGG | - | chr3_2:72340650-72340669 | Msa0422830:CDS | 50.0% | |
| CCCTTCCCCTTTATGACTGC+AGG | + | chr3_2:72336734-72336753 | None:intergenic | 55.0% | |
| AGTGCCCACACAGCTGCTAT+TGG | - | chr3_2:72336899-72336918 | Msa0422830:intron | 55.0% | |
| CCCACACAGCTGCTATTGGT+AGG | - | chr3_2:72336903-72336922 | Msa0422830:intron | 55.0% | |
| GCTGTTCTGTGTGCTGAGAG+AGG | - | chr3_2:72337047-72337066 | Msa0422830:intron | 55.0% | |
| GAGTCAGTGGCCGGAAACAA+TGG | - | chr3_2:72337212-72337231 | Msa0422830:intron | 55.0% | |
| AATAACCCTCCGGTTCCCAG+TGG | - | chr3_2:72337674-72337693 | Msa0422830:intron | 55.0% | |
| TCTTTCCACTGGGAACCGGA+GGG | + | chr3_2:72337682-72337701 | None:intergenic | 55.0% | |
| TACCAGGGGCTCTTTCCACT+GGG | + | chr3_2:72337692-72337711 | None:intergenic | 55.0% | |
| TTACCAGGGGCTCTTTCCAC+TGG | + | chr3_2:72337693-72337712 | None:intergenic | 55.0% | |
| GGAAAGAGCCCCTGGTAATC+TGG | - | chr3_2:72337695-72337714 | Msa0422830:intron | 55.0% | |
| !! | GGTACTGGCACAACAGCAGT+TGG | - | chr3_2:72338431-72338450 | Msa0422830:intron | 55.0% |
| TGCTTCTGTGCAGACTCCCA+TGG | - | chr3_2:72338608-72338627 | Msa0422830:intron | 55.0% | |
| GCTTCTGTGCAGACTCCCAT+GGG | - | chr3_2:72338609-72338628 | Msa0422830:intron | 55.0% | |
| TGATGGGATTGTGCACTGGG+TGG | - | chr3_2:72338753-72338772 | Msa0422830:intron | 55.0% | |
| ACCCTCGACATCAGTGCATC+TGG | - | chr3_2:72339170-72339189 | Msa0422830:intron | 55.0% | |
| ! | GTCCAGATGCACTGATGTCG+AGG | + | chr3_2:72339175-72339194 | None:intergenic | 55.0% |
| CCAAACACGGCCATCTCTCT+TGG | + | chr3_2:72339785-72339804 | None:intergenic | 55.0% | |
| CCAAGAGAGATGGCCGTGTT+TGG | - | chr3_2:72339782-72339801 | Msa0422830:intron | 55.0% | |
| ! | GGAGGCACATTGGGCTTGTT+TGG | - | chr3_2:72340505-72340524 | Msa0422830:CDS | 55.0% |
| !! | GCTTGTTTGGGTTGGCACAG+AGG | - | chr3_2:72340518-72340537 | Msa0422830:CDS | 55.0% |
| AGCCACGACTTACCCCTACA+AGG | + | chr3_2:72340655-72340674 | None:intergenic | 55.0% | |
| GGCACTCTGACAACCTCCAC+AGG | + | chr3_2:72336885-72336904 | None:intergenic | 60.0% | |
| AGCTATGCCGAGTCAGTGGC+CGG | - | chr3_2:72337203-72337222 | Msa0422830:intron | 60.0% | |
| CTCTTTCCACTGGGAACCGG+AGG | + | chr3_2:72337683-72337702 | None:intergenic | 60.0% | |
| GGGCTCTTTCCACTGGGAAC+CGG | + | chr3_2:72337686-72337705 | None:intergenic | 60.0% | |
| TTCCCAGTGGAAAGAGCCCC+TGG | - | chr3_2:72337687-72337706 | Msa0422830:intron | 60.0% | |
| TCTGTGCAGACTCCCATGGG+AGG | - | chr3_2:72338612-72338631 | Msa0422830:intron | 60.0% | |
| GGAGGGAGGCTTTGCCATGA+TGG | - | chr3_2:72339952-72339971 | Msa0422830:intron | 60.0% | |
| ! | CCTTCGGAAAGCGCGCATCC+AGG | + | chr3_2:72339209-72339228 | None:intergenic | 65.0% |
| CCTGGATGCGCGCTTTCCGA+AGG | - | chr3_2:72339206-72339225 | Msa0422830:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 72335753 | 72340833 | 72335753 | ID=Msa0422830;Name=Msa0422830 |
| chr3_2 | mRNA | 72335753 | 72340833 | 72335753 | ID=Msa0422830-mRNA-1;Parent=Msa0422830;Name=Msa0422830-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|1|0.85|1|1|1|7|239|428 |
| chr3_2 | exon | 72335753 | 72336244 | 72335753 | ID=Msa0422830-mRNA-1:exon:17851;Parent=Msa0422830-mRNA-1 |
| chr3_2 | exon | 72337792 | 72337965 | 72337792 | ID=Msa0422830-mRNA-1:exon:17850;Parent=Msa0422830-mRNA-1 |
| chr3_2 | exon | 72338106 | 72338235 | 72338106 | ID=Msa0422830-mRNA-1:exon:17849;Parent=Msa0422830-mRNA-1 |
| chr3_2 | exon | 72339191 | 72339538 | 72339191 | ID=Msa0422830-mRNA-1:exon:17848;Parent=Msa0422830-mRNA-1 |
| chr3_2 | exon | 72339666 | 72339708 | 72339666 | ID=Msa0422830-mRNA-1:exon:17847;Parent=Msa0422830-mRNA-1 |
| chr3_2 | exon | 72340379 | 72340684 | 72340379 | ID=Msa0422830-mRNA-1:exon:17846;Parent=Msa0422830-mRNA-1 |
| chr3_2 | exon | 72340801 | 72340833 | 72340801 | ID=Msa0422830-mRNA-1:exon:17845;Parent=Msa0422830-mRNA-1 |
| chr3_2 | CDS | 72340801 | 72340833 | 72340801 | ID=Msa0422830-mRNA-1:cds;Parent=Msa0422830-mRNA-1 |
| chr3_2 | CDS | 72340379 | 72340684 | 72340379 | ID=Msa0422830-mRNA-1:cds;Parent=Msa0422830-mRNA-1 |
| chr3_2 | CDS | 72339666 | 72339708 | 72339666 | ID=Msa0422830-mRNA-1:cds;Parent=Msa0422830-mRNA-1 |
| chr3_2 | CDS | 72339191 | 72339538 | 72339191 | ID=Msa0422830-mRNA-1:cds;Parent=Msa0422830-mRNA-1 |
| chr3_2 | CDS | 72338106 | 72338235 | 72338106 | ID=Msa0422830-mRNA-1:cds;Parent=Msa0422830-mRNA-1 |
| chr3_2 | CDS | 72337792 | 72337965 | 72337792 | ID=Msa0422830-mRNA-1:cds;Parent=Msa0422830-mRNA-1 |
| chr3_2 | CDS | 72335992 | 72336244 | 72335992 | ID=Msa0422830-mRNA-1:cds;Parent=Msa0422830-mRNA-1 |
| chr3_2 | three_prime_UTR | 72335753 | 72335991 | 72335753 | ID=Msa0422830-mRNA-1:three_prime_utr;Parent=Msa0422830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
