Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422910 | XP_003601876.2 | 94.626 | 428 | 21 | 2 | 1 | 428 | 1 | 426 | 0.0 | 831 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422910 | sp|A1L4V7|DCYD2_ARATH | 58.134 | 418 | 159 | 6 | 8 | 421 | 22 | 427 | 1.97e-170 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422910 | G7J2M0 | 94.626 | 428 | 21 | 2 | 1 | 428 | 1 | 426 | 0.0 | 831 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0422910 | 0.814758 | 1.308551e-51 | -8.615850e-47 |
| Msa0002540 | Msa0422910 | 0.807667 | 4.520115e-50 | -8.615850e-47 |
| Msa0016670 | Msa0422910 | 0.807974 | 3.888518e-50 | -8.615850e-47 |
| Msa0032840 | Msa0422910 | -0.820019 | 8.554054e-53 | -8.615850e-47 |
| Msa0041620 | Msa0422910 | 0.814949 | 1.187218e-51 | -8.615850e-47 |
| Msa0044020 | Msa0422910 | 0.802326 | 5.915603e-49 | -8.615850e-47 |
| Msa0046750 | Msa0422910 | 0.808709 | 2.710455e-50 | -8.615850e-47 |
| Msa0053110 | Msa0422910 | 0.817030 | 4.074556e-52 | -8.615850e-47 |
| Msa0072810 | Msa0422910 | 0.808865 | 2.510640e-50 | -8.615850e-47 |
| Msa0073670 | Msa0422910 | 0.816401 | 5.635609e-52 | -8.615850e-47 |
| Msa0090590 | Msa0422910 | 0.811605 | 6.440094e-51 | -8.615850e-47 |
| Msa0095380 | Msa0422910 | 0.808187 | 3.503136e-50 | -8.615850e-47 |
| Msa0096670 | Msa0422910 | 0.810387 | 1.182201e-50 | -8.615850e-47 |
| Msa0103000 | Msa0422910 | 0.812368 | 4.392168e-51 | -8.615850e-47 |
| Msa0109950 | Msa0422910 | 0.816595 | 5.098808e-52 | -8.615850e-47 |
| Msa0114540 | Msa0422910 | -0.801652 | 8.140523e-49 | -8.615850e-47 |
| Msa0124340 | Msa0422910 | 0.800149 | 1.650221e-48 | -8.615850e-47 |
| Msa0143080 | Msa0422910 | 0.829433 | 5.163185e-55 | -8.615850e-47 |
| Msa0143430 | Msa0422910 | 0.813614 | 2.340860e-51 | -8.615850e-47 |
| Msa0172350 | Msa0422910 | 0.817973 | 2.496940e-52 | -8.615850e-47 |
| Msa0183620 | Msa0422910 | 0.819104 | 1.384099e-52 | -8.615850e-47 |
| Msa0183830 | Msa0422910 | 0.816174 | 6.336343e-52 | -8.615850e-47 |
| Msa0194970 | Msa0422910 | 0.812315 | 4.508928e-51 | -8.615850e-47 |
| Msa0207000 | Msa0422910 | 0.802005 | 6.887955e-49 | -8.615850e-47 |
| Msa0230550 | Msa0422910 | -0.812769 | 3.588525e-51 | -8.615850e-47 |
| Msa0236980 | Msa0422910 | 0.835005 | 2.157534e-56 | -8.615850e-47 |
| Msa0369570 | Msa0422910 | 0.807194 | 5.694937e-50 | -8.615850e-47 |
| Msa0378080 | Msa0422910 | 0.809759 | 1.614138e-50 | -8.615850e-47 |
| Msa0393950 | Msa0422910 | 0.805450 | 1.326871e-49 | -8.615850e-47 |
| Msa0414950 | Msa0422910 | -0.803198 | 3.908627e-49 | -8.615850e-47 |
| Msa0419820 | Msa0422910 | 0.803416 | 3.522076e-49 | -8.615850e-47 |
| Msa0422830 | Msa0422910 | 0.997225 | 6.632177e-239 | -8.615850e-47 |
| Msa0422850 | Msa0422910 | 0.802578 | 5.248976e-49 | -8.615850e-47 |
| Msa0422910 | Msa0431430 | 0.805965 | 1.034818e-49 | -8.615850e-47 |
| Msa0422910 | Msa0436280 | -0.823663 | 1.227070e-53 | -8.615850e-47 |
| Msa0422910 | Msa0436460 | 0.806416 | 8.315575e-50 | -8.615850e-47 |
| Msa0422910 | Msa0441800 | 0.806833 | 6.787557e-50 | -8.615850e-47 |
| Msa0422910 | Msa0469910 | -0.803585 | 3.250060e-49 | -8.615850e-47 |
| Msa0422910 | Msa0480320 | 0.805801 | 1.120166e-49 | -8.615850e-47 |
| Msa0422910 | Msa0521880 | 0.839830 | 1.253244e-57 | -8.615850e-47 |
| Msa0422910 | Msa0525340 | 0.810399 | 1.175056e-50 | -8.615850e-47 |
| Msa0422910 | Msa0526710 | 0.810635 | 1.044804e-50 | -8.615850e-47 |
| Msa0422910 | Msa0532330 | 0.814552 | 1.453711e-51 | -8.615850e-47 |
| Msa0422910 | Msa0546840 | 0.806145 | 9.480377e-50 | -8.615850e-47 |
| Msa0422910 | Msa0547140 | 0.801761 | 7.731035e-49 | -8.615850e-47 |
| Msa0422910 | Msa0560470 | 0.805743 | 1.152028e-49 | -8.615850e-47 |
| Msa0422910 | Msa0590680 | 0.834673 | 2.616402e-56 | -8.615850e-47 |
| Msa0422910 | Msa0591060 | 0.810612 | 1.057042e-50 | -8.615850e-47 |
| Msa0422910 | Msa0591770 | 0.845926 | 2.993787e-59 | -8.615850e-47 |
| Msa0422910 | Msa0604360 | 0.807273 | 5.478323e-50 | -8.615850e-47 |
| Msa0422910 | Msa0639120 | 0.806023 | 1.006178e-49 | -8.615850e-47 |
| Msa0422910 | Msa0654540 | 0.807609 | 4.648605e-50 | -8.615850e-47 |
| Msa0422910 | Msa0669850 | 0.824667 | 7.127617e-54 | -8.615850e-47 |
| Msa0422910 | Msa0677290 | 0.818144 | 2.285375e-52 | -8.615850e-47 |
| Msa0422910 | Msa0678860 | 0.800987 | 1.113540e-48 | -8.615850e-47 |
| Msa0422910 | Msa0692080 | 0.825124 | 5.560254e-54 | -8.615850e-47 |
| Msa0422910 | Msa0696620 | 0.807456 | 5.011208e-50 | -8.615850e-47 |
| Msa0422910 | Msa0747780 | 0.808876 | 2.496664e-50 | -8.615850e-47 |
| Msa0422910 | Msa0755340 | 0.817255 | 3.625969e-52 | -8.615850e-47 |
| Msa0422910 | Msa0761580 | 0.800563 | 1.359222e-48 | -8.615850e-47 |
| Msa0422910 | Msa0778320 | 0.807294 | 5.423167e-50 | -8.615850e-47 |
| Msa0422910 | Msa0785560 | 0.804307 | 2.299833e-49 | -8.615850e-47 |
| Msa0422910 | Msa0797120 | 0.811170 | 8.005289e-51 | -8.615850e-47 |
| Msa0422910 | Msa0831580 | 0.807594 | 4.683519e-50 | -8.615850e-47 |
| Msa0422910 | Msa0842230 | 0.812740 | 3.641483e-51 | -8.615850e-47 |
| Msa0422910 | Msa0845750 | 0.839352 | 1.668433e-57 | -8.615850e-47 |
| Msa0422910 | Msa0847080 | 0.821388 | 4.146770e-53 | -8.615850e-47 |
| Msa0422910 | Msa0872310 | 0.823212 | 1.564369e-53 | -8.615850e-47 |
| Msa0422910 | Msa0890250 | 0.818247 | 2.165712e-52 | -8.615850e-47 |
| Msa0422910 | Msa0900630 | 0.811496 | 6.799685e-51 | -8.615850e-47 |
| Msa0422910 | Msa0905550 | 0.813951 | 1.973445e-51 | -8.615850e-47 |
| Msa0422910 | Msa0926460 | 0.802889 | 4.528429e-49 | -8.615850e-47 |
| Msa0422910 | Msa0930780 | 0.816023 | 6.848514e-52 | -8.615850e-47 |
| Msa0422910 | Msa0937550 | 0.824473 | 7.920893e-54 | -8.615850e-47 |
| Msa0422910 | Msa0941730 | 0.809008 | 2.339648e-50 | -8.615850e-47 |
| Msa0422910 | Msa0965860 | 0.807593 | 4.686882e-50 | -8.615850e-47 |
| Msa0422910 | Msa0996080 | 0.808254 | 3.390307e-50 | -8.615850e-47 |
| Msa0422910 | Msa1000690 | 0.803802 | 2.930294e-49 | -8.615850e-47 |
| Msa0422910 | Msa1008060 | -0.801147 | 1.032769e-48 | -8.615850e-47 |
| Msa0422910 | Msa1012700 | 0.813785 | 2.146840e-51 | -8.615850e-47 |
| Msa0422910 | Msa1012810 | 0.812914 | 3.335529e-51 | -8.615850e-47 |
| Msa0422910 | Msa1018790 | 0.816177 | 6.325305e-52 | -8.615850e-47 |
| Msa0422910 | Msa1040830 | 0.807308 | 5.386806e-50 | -8.615850e-47 |
| Msa0422910 | Msa1049510 | -0.815986 | 6.978352e-52 | -8.615850e-47 |
| Msa0422910 | Msa1082700 | 0.834595 | 2.736772e-56 | -8.615850e-47 |
| Msa0422910 | Msa1109570 | 0.800653 | 1.303171e-48 | -8.615850e-47 |
| Msa0422910 | Msa1126510 | 0.807184 | 5.722937e-50 | -8.615850e-47 |
| Msa0422910 | Msa1127890 | 0.814629 | 1.397607e-51 | -8.615850e-47 |
| Msa0422910 | Msa1134110 | 0.829202 | 5.872135e-55 | -8.615850e-47 |
| Msa0422910 | Msa1139810 | 0.804494 | 2.103228e-49 | -8.615850e-47 |
| Msa0422910 | Msa1165870 | 0.809325 | 2.000489e-50 | -8.615850e-47 |
| Msa0422910 | Msa1193950 | -0.816655 | 4.944563e-52 | -8.615850e-47 |
| Msa0422910 | Msa1211090 | 0.803142 | 4.014531e-49 | -8.615850e-47 |
| Msa0422910 | Msa1226620 | 0.803715 | 3.054315e-49 | -8.615850e-47 |
| Msa0422910 | Msa1237030 | 0.815449 | 9.191242e-52 | -8.615850e-47 |
| Msa0422910 | Msa1249870 | 0.801568 | 8.467165e-49 | -8.615850e-47 |
| Msa0422910 | Msa1269580 | -0.824979 | 6.018775e-54 | -8.615850e-47 |
| Msa0422910 | Msa1284520 | 0.818061 | 2.385393e-52 | -8.615850e-47 |
| Msa0422910 | Msa1362510 | 0.818234 | 2.179594e-52 | -8.615850e-47 |
| Msa0422910 | Msa1365150 | 0.808927 | 2.435004e-50 | -8.615850e-47 |
| Msa0422910 | Msa1365200 | 0.805184 | 1.508526e-49 | -8.615850e-47 |
| Msa0422910 | Msa1367880 | 0.809850 | 1.542846e-50 | -8.615850e-47 |
| Msa0422910 | Msa1382310 | 0.839603 | 1.435543e-57 | -8.615850e-47 |
| Msa0422910 | Msa1390310 | 0.823144 | 1.621968e-53 | -8.615850e-47 |
| Msa0422910 | Msa1406040 | 0.801070 | 1.070698e-48 | -8.615850e-47 |
| Msa0422910 | Msa1429250 | 0.802441 | 5.601873e-49 | -8.615850e-47 |
| Msa0422910 | Msa1429360 | -0.820478 | 6.715582e-53 | -8.615850e-47 |
| Msa0422910 | Msa1453620 | 0.804212 | 2.407261e-49 | -8.615850e-47 |
| Msa0422910 | Msa1466990 | 0.802625 | 5.134147e-49 | -8.615850e-47 |
| Msa0246690 | Msa0422910 | 0.805742 | 1.152413e-49 | -8.615850e-47 |
| Msa0264570 | Msa0422910 | 0.814071 | 1.856716e-51 | -8.615850e-47 |
| Msa0267760 | Msa0422910 | 0.816552 | 5.215102e-52 | -8.615850e-47 |
| Msa0308830 | Msa0422910 | 0.803012 | 4.270328e-49 | -8.615850e-47 |
| Msa0317310 | Msa0422910 | 0.801127 | 1.042305e-48 | -8.615850e-47 |
| Msa0328210 | Msa0422910 | 0.848102 | 7.592454e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422910 | MtrunA17_Chr3g0123371 | 92.623 | 244 | 16 | 2 | 1 | 244 | 1 | 242 | 1.08e-163 | 461 |
| Msa0422910 | MtrunA17_Chr3g0123381 | 96.970 | 165 | 5 | 0 | 264 | 428 | 1 | 165 | 5.10e-116 | 336 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422910 | AT3G26115.1 | 58.134 | 418 | 159 | 6 | 8 | 421 | 22 | 427 | 2.00e-171 | 487 |
| Msa0422910 | AT3G26115.3 | 62.963 | 351 | 117 | 4 | 73 | 421 | 5 | 344 | 6.57e-163 | 462 |
| Msa0422910 | AT3G26115.2 | 62.963 | 351 | 117 | 4 | 73 | 421 | 5 | 344 | 6.57e-163 | 462 |
| Msa0422910 | AT3G26115.4 | 58.485 | 330 | 123 | 5 | 21 | 346 | 35 | 354 | 1.13e-134 | 392 |
| Msa0422910 | AT3G26115.5 | 59.797 | 296 | 106 | 4 | 128 | 421 | 18 | 302 | 1.38e-124 | 363 |
Find 101 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAATAACTTGATGAATTT+TGG | 0.113989 | 3_2:+72448194 | None:intergenic |
| TTCTAGATTTGGCAATATTT+TGG | 0.158592 | 3_2:-72443845 | Msa0422910:intron |
| TCAAATAATGTAATTTCTTT+TGG | 0.173224 | 3_2:-72443568 | Msa0422910:three_prime_UTR |
| TTGAACACAAATCCAGATTT+TGG | 0.179164 | 3_2:-72448141 | Msa0422910:CDS |
| GCTTCCATTTGCATAAAATT+TGG | 0.188543 | 3_2:+72446885 | None:intergenic |
| TCTATAACATCTTACTTTCT+TGG | 0.200155 | 3_2:+72445394 | None:intergenic |
| GGAGGCACATTGGGCTTGTT+TGG | 0.235639 | 3_2:-72443676 | Msa0422910:CDS |
| TTATAGCCAGTCAAGATTTC+AGG | 0.282652 | 3_2:+72447077 | None:intergenic |
| CTGTTGGCGTAAACATTTCT+TGG | 0.300656 | 3_2:+72447017 | None:intergenic |
| TTGTTGCACCCGCTGATTAA+TGG | 0.301555 | 3_2:-72448060 | Msa0422910:CDS |
| TAGGACAGAACCATTGTTTC+CGG | 0.305021 | 3_2:+72446959 | None:intergenic |
| CCTCCTAAGTGAGGAGTCTA+TGG | 0.307589 | 3_2:-72448259 | Msa0422910:CDS |
| TTCTTTGTATAGGTATTATT+CGG | 0.317658 | 3_2:-72445842 | Msa0422910:intron |
| CAAGAAATGTTTACGCCAAC+AGG | 0.321119 | 3_2:-72447016 | Msa0422910:CDS |
| GAGGCACATTGGGCTTGTTT+GGG | 0.331209 | 3_2:-72443675 | Msa0422910:CDS |
| AACTTGATGTCTACAATATA+CGG | 0.331391 | 3_2:-72447056 | Msa0422910:CDS |
| GGACTTGCAGCACTTTGCTT+AGG | 0.335904 | 3_2:-72445723 | Msa0422910:CDS |
| TGGTAATAAAGCAAGAAAAT+TGG | 0.340129 | 3_2:-72448040 | Msa0422910:CDS |
| TCCTCACTTAGGAGGAGTTT+TGG | 0.345728 | 3_2:+72448267 | None:intergenic |
| ACATTGCCATTACCAAAATC+TGG | 0.350689 | 3_2:+72448129 | None:intergenic |
| CACATTGGGCTTGTTTGGGT+TGG | 0.353121 | 3_2:-72443671 | Msa0422910:CDS |
| CTTCATACTGGAGGCACATT+GGG | 0.385183 | 3_2:-72443685 | Msa0422910:CDS |
| CCACTAGAATACCAGTTTGC+TGG | 0.406758 | 3_2:+72443791 | None:intergenic |
| GTGAAGTTTGTTGTGGATGC+TGG | 0.420790 | 3_2:-72445771 | Msa0422910:CDS |
| AATTGATGGGTACCGAAAAC+AGG | 0.432157 | 3_2:-72445521 | Msa0422910:CDS |
| GGTGATTCTGTTGCTCTACT+AGG | 0.439298 | 3_2:-72446807 | Msa0422910:intron |
| TTTGTTGTGGATGCTGGTAC+TGG | 0.444120 | 3_2:-72445765 | Msa0422910:CDS |
| GACTTGCAGCACTTTGCTTA+GGG | 0.444275 | 3_2:-72445722 | Msa0422910:intron |
| CAGCAAATTGCCCAGCAAAC+TGG | 0.448004 | 3_2:-72443802 | Msa0422910:CDS |
| TGTCTACACATTAGCTGCTT+GGG | 0.449660 | 3_2:-72443764 | Msa0422910:CDS |
| CTTTAGCATTTCTTCCCTGT+TGG | 0.450134 | 3_2:+72447001 | None:intergenic |
| CACGATGTAAACAAAGATGA+TGG | 0.462326 | 3_2:-72445445 | Msa0422910:CDS |
| AGTGCCCACACAGCTGCTAT+TGG | 0.463165 | 3_2:-72447282 | Msa0422910:intron |
| TTGTCGCAGAATCATTTACT+TGG | 0.469233 | 3_2:-72445807 | Msa0422910:CDS |
| TGCTTCTGTGCAGACTCCCA+TGG | 0.469456 | 3_2:-72445573 | Msa0422910:intron |
| CTTTATTACCATTAATCAGC+GGG | 0.489787 | 3_2:+72448052 | None:intergenic |
| ATCATTTACTTGGGAAACAA+AGG | 0.490526 | 3_2:-72445797 | Msa0422910:CDS |
| GAAGTGGTGATGCTTCATAC+TGG | 0.490583 | 3_2:-72443697 | Msa0422910:CDS |
| GAATGAAGACAGAGCAGAAG+TGG | 0.491181 | 3_2:-72443713 | Msa0422910:CDS |
| AGTTATTCATAAACATGGAC+TGG | 0.493891 | 3_2:-72448181 | Msa0422910:CDS |
| CACTAGAATACCAGTTTGCT+GGG | 0.498244 | 3_2:+72443792 | None:intergenic |
| CTGTCTACACATTAGCTGCT+TGG | 0.498673 | 3_2:-72443765 | Msa0422910:CDS |
| AAATAAATAAAAGTAATTTG+TGG | 0.500577 | 3_2:+72443448 | None:intergenic |
| ATGCTGGCTGATAAAATTGA+TGG | 0.508131 | 3_2:-72445535 | Msa0422910:CDS |
| TAACATCTTACTTTCTTGGA+TGG | 0.510447 | 3_2:+72445398 | None:intergenic |
| GAAACAATGGTTCTGTCCTA+TGG | 0.515150 | 3_2:-72446956 | Msa0422910:CDS |
| GTTTAAAATAAGTGAAGTTG+TGG | 0.515905 | 3_2:+72443380 | None:intergenic |
| CAAGCAGCTAATGTGTAGAC+AGG | 0.521364 | 3_2:+72443766 | None:intergenic |
| CCATAGACTCCTCACTTAGG+AGG | 0.522174 | 3_2:+72448259 | None:intergenic |
| AAGATGATGGGATTGTGCAC+TGG | 0.522667 | 3_2:-72445432 | Msa0422910:CDS |
| GGCACAACAGCAGTTGGTAT+AGG | 0.525800 | 3_2:-72445744 | Msa0422910:CDS |
| TTAATTGTCAATGAAGGGGC+TGG | 0.526047 | 3_2:-72446828 | Msa0422910:CDS |
| TTTCCATAGACTCCTCACTT+AGG | 0.529788 | 3_2:+72448256 | None:intergenic |
| GGCACTCTGACAACCTCCAC+AGG | 0.529946 | 3_2:+72447299 | None:intergenic |
| GCTTCATACTGGAGGCACAT+TGG | 0.536337 | 3_2:-72443686 | Msa0422910:CDS |
| CATCAAGTTATTCATAAACA+TGG | 0.536859 | 3_2:-72448186 | Msa0422910:CDS |
| AGCTATGCCGAGTCAGTGGC+CGG | 0.538289 | 3_2:-72446978 | Msa0422910:CDS |
| TCATTTACTTGGGAAACAAA+GGG | 0.538446 | 3_2:-72445796 | Msa0422910:CDS |
| GAATGATATCACTGAACCAT+AGG | 0.540099 | 3_2:+72446940 | None:intergenic |
| AATAAAGCAAGAAAATTGGA+TGG | 0.546969 | 3_2:-72448036 | Msa0422910:CDS |
| ATTGTTTCCGGCCACTGACT+CGG | 0.547238 | 3_2:+72446971 | None:intergenic |
| GCTTCTGTGCAGACTCCCAT+GGG | 0.548103 | 3_2:-72445572 | Msa0422910:intron |
| TGTCGCAGAATCATTTACTT+GGG | 0.550672 | 3_2:-72445806 | Msa0422910:CDS |
| GAGCAGCCTGAAATCTTGAC+TGG | 0.552886 | 3_2:-72447083 | Msa0422910:CDS |
| CACATTAGCTGCTTGGGAAG+CGG | 0.554018 | 3_2:-72443758 | Msa0422910:CDS |
| GACTTTATAATCATGAAGCA+AGG | 0.554313 | 3_2:+72448005 | None:intergenic |
| AGATGATGGGATTGTGCACT+GGG | 0.557894 | 3_2:-72445431 | Msa0422910:CDS |
| ATGACTGCATATACCTCCCA+TGG | 0.564868 | 3_2:+72445556 | None:intergenic |
| GGAGGTATATGCAGTCATGC+TGG | 0.575564 | 3_2:-72445551 | Msa0422910:CDS |
| GAGTCAGTGGCCGGAAACAA+TGG | 0.576023 | 3_2:-72446969 | Msa0422910:CDS |
| TACTGAATACTACAAAGTCA+TGG | 0.593143 | 3_2:+72443404 | None:intergenic |
| CCTACCAATAGCAGCTGTGT+GGG | 0.594418 | 3_2:+72447278 | None:intergenic |
| ACGATGTAAACAAAGATGAT+GGG | 0.599833 | 3_2:-72445444 | Msa0422910:CDS |
| GCTTGTTTGGGTTGGCACAG+AGG | 0.603118 | 3_2:-72443663 | Msa0422910:CDS |
| GTTATTCATAAACATGGACT+GGG | 0.608725 | 3_2:-72448180 | Msa0422910:CDS |
| CATCATCTTTGTTTACATCG+TGG | 0.609610 | 3_2:+72445446 | None:intergenic |
| AAGGGCTGTGAAGTTTGTTG+TGG | 0.613607 | 3_2:-72445778 | Msa0422910:CDS |
| AAAGAGCTATGCCGAGTCAG+TGG | 0.614125 | 3_2:-72446982 | Msa0422910:CDS |
| GCTGTTCTGTGTGCTGAGAG+AGG | 0.614335 | 3_2:-72447134 | Msa0422910:CDS |
| CTCTTCGCTAGAAAGAAGCA+TGG | 0.618633 | 3_2:+72443735 | None:intergenic |
| CCAGCAAACTGGTATTCTAG+TGG | 0.620364 | 3_2:-72443791 | Msa0422910:CDS |
| ACTTTATAATCATGAAGCAA+GGG | 0.622788 | 3_2:+72448006 | None:intergenic |
| AGCCACGACTTACCCCTACA+AGG | 0.623494 | 3_2:+72443529 | None:intergenic |
| GCTTTATTACCATTAATCAG+CGG | 0.623719 | 3_2:+72448051 | None:intergenic |
| ACCTACCAATAGCAGCTGTG+TGG | 0.624875 | 3_2:+72447277 | None:intergenic |
| TGATTATAAAGTCACTGATG+TGG | 0.625747 | 3_2:-72447995 | Msa0422910:intron |
| TGCTGGCTGATAAAATTGAT+GGG | 0.627219 | 3_2:-72445534 | Msa0422910:CDS |
| AATGGAAGCTAGTCAAAGTG+AGG | 0.628363 | 3_2:-72446871 | Msa0422910:CDS |
| GGTACTGGCACAACAGCAGT+TGG | 0.628373 | 3_2:-72445750 | Msa0422910:CDS |
| AAGAAATGTTTACGCCAACA+GGG | 0.631071 | 3_2:-72447015 | Msa0422910:CDS |
| TACCTTGTAGGGGTAAGTCG+TGG | 0.637635 | 3_2:-72443531 | Msa0422910:three_prime_UTR |
| TCTGTGCAGACTCCCATGGG+AGG | 0.637900 | 3_2:-72445569 | Msa0422910:intron |
| ACCAAAACTCCTCCTAAGTG+AGG | 0.648746 | 3_2:-72448268 | Msa0422910:CDS |
| AAAAGTTACTCAACAGAACG+TGG | 0.653642 | 3_2:-72448236 | Msa0422910:CDS |
| ATGTTGAAATCGATAAACAA+AGG | 0.654558 | 3_2:-72448110 | Msa0422910:CDS |
| TGACTGCATATACCTCCCAT+GGG | 0.661084 | 3_2:+72445557 | None:intergenic |
| ATGGAAGCTAGTCAAAGTGA+GGG | 0.664903 | 3_2:-72446870 | Msa0422910:CDS |
| GTGGTGATGCTTCATACTGG+AGG | 0.678053 | 3_2:-72443694 | Msa0422910:CDS |
| ATTCATAAACATGGACTGGG+AGG | 0.691026 | 3_2:-72448177 | Msa0422910:CDS |
| TGATGGGATTGTGCACTGGG+TGG | 0.714319 | 3_2:-72445428 | Msa0422910:CDS |
| ATGTCACATCTGCTTCTACG+AGG | 0.730665 | 3_2:-72447107 | Msa0422910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTACTATTCTTTATTTTAT+TGG | - | chr3_2:72443874-72443893 | Msa0422910:intron | 10.0% |
| !! | TTCTTATTATATACTATTAA+TGG | - | chr3_2:72444053-72444072 | Msa0422910:intron | 10.0% |
| !! | TCTTATTATATACTATTAAT+GGG | - | chr3_2:72444054-72444073 | Msa0422910:intron | 10.0% |
| !!! | GAACAATAAATTAATATTTT+TGG | - | chr3_2:72445264-72445283 | Msa0422910:intron | 10.0% |
| !!! | TTTTATTTAATTCTACAAAT+TGG | - | chr3_2:72445874-72445893 | Msa0422910:intron | 10.0% |
| !!! | TTTTTTTTCTTTCTTTTTTA+TGG | - | chr3_2:72446430-72446449 | Msa0422910:intron | 10.0% |
| !! | GAAAATAAATAAAAAACAAA+AGG | + | chr3_2:72448310-72448329 | None:intergenic | 10.0% |
| !! | AAATAAATAAAAGTAATTTG+TGG | + | chr3_2:72448353-72448372 | None:intergenic | 10.0% |
| !!! | AGTAAATTTTGCAATTAATA+AGG | + | chr3_2:72444165-72444184 | None:intergenic | 15.0% |
| !!! | TAATACTACTTTTCATATAA+TGG | - | chr3_2:72444625-72444644 | Msa0422910:intron | 15.0% |
| !! | GAAAATTTAATATATAAGTG+AGG | - | chr3_2:72445168-72445187 | Msa0422910:intron | 15.0% |
| !! | TCAATAATATCTTTCATATA+TGG | + | chr3_2:72445232-72445251 | None:intergenic | 15.0% |
| !! | TAATAAGATTTAGTTAAGAA+CGG | + | chr3_2:72445417-72445436 | None:intergenic | 15.0% |
| !! | TTGATATATATTGTTGTAAT+TGG | - | chr3_2:72445642-72445661 | Msa0422910:intron | 15.0% |
| !! | TTCTTAATAAATGATAATCA+AGG | + | chr3_2:72445765-72445784 | None:intergenic | 15.0% |
| !! | GATTATCATTTATTAAGAAT+AGG | - | chr3_2:72445766-72445785 | Msa0422910:CDS | 15.0% |
| !!! | AAAATGTTATTTCTTTGTAT+AGG | - | chr3_2:72445946-72445965 | Msa0422910:intron | 15.0% |
| !!! | ATAGATTTTTTTAGTAGTAA+GGG | - | chr3_2:72446846-72446865 | Msa0422910:CDS | 15.0% |
| !! | ATCATAAAAAACTAATCAAA+TGG | + | chr3_2:72447053-72447072 | None:intergenic | 15.0% |
| !! | GTTCATATAAATATAAAAGA+AGG | + | chr3_2:72447281-72447300 | None:intergenic | 15.0% |
| !!! | TCAAATAATGTAATTTCTTT+TGG | - | chr3_2:72448230-72448249 | Msa0422910:CDS | 15.0% |
| !!! | CAAATAATGTAATTTCTTTT+GGG | - | chr3_2:72448231-72448250 | Msa0422910:CDS | 15.0% |
| !!! | TATTTTATTATTTACCTTGT+AGG | - | chr3_2:72448255-72448274 | Msa0422910:CDS | 15.0% |
| !!! | ATTTTATTATTTACCTTGTA+GGG | - | chr3_2:72448256-72448275 | Msa0422910:CDS | 15.0% |
| !! | TAAATAAAAAACAAAAGGAA+TGG | + | chr3_2:72448305-72448324 | None:intergenic | 15.0% |
| !!! | ATGAATAACTTGATGAATTT+TGG | + | chr3_2:72443607-72443626 | None:intergenic | 20.0% |
| !!! | GAATTAAAGGCTTAATTTTT+GGG | + | chr3_2:72443957-72443976 | None:intergenic | 20.0% |
| !!! | TGAATTAAAGGCTTAATTTT+TGG | + | chr3_2:72443958-72443977 | None:intergenic | 20.0% |
| !! | AAAAAGTGAGTTAACTTTAA+CGG | - | chr3_2:72444119-72444138 | Msa0422910:intron | 20.0% |
| !! | ATTATAAATATCTCAGATTG+TGG | - | chr3_2:72444292-72444311 | Msa0422910:intron | 20.0% |
| !! | TTATAAATATCTCAGATTGT+GGG | - | chr3_2:72444293-72444312 | Msa0422910:intron | 20.0% |
| !! | TATGATAAGGAACAAATTAA+AGG | + | chr3_2:72444392-72444411 | None:intergenic | 20.0% |
| !!! | AAGATTTTAATTGTCAATGA+AGG | - | chr3_2:72444964-72444983 | Msa0422910:intron | 20.0% |
| !!! | AGATTTTAATTGTCAATGAA+GGG | - | chr3_2:72444965-72444984 | Msa0422910:intron | 20.0% |
| !! | AAATACAGATAACTTTATCT+AGG | + | chr3_2:72445143-72445162 | None:intergenic | 20.0% |
| !! | TATGAAAGATATTATTGAAC+AGG | - | chr3_2:72445234-72445253 | Msa0422910:intron | 20.0% |
| !! | ATATATTGTTGTAATTGGAA+TGG | - | chr3_2:72445647-72445666 | Msa0422910:intron | 20.0% |
| !! | ATAAATGATAATCAAGGAAA+AGG | + | chr3_2:72445759-72445778 | None:intergenic | 20.0% |
| !! | TCATTTATTAAGAATAGGAT+AGG | - | chr3_2:72445771-72445790 | Msa0422910:CDS | 20.0% |
| !! | TGAAATTCAGTTAACTTTAA+TGG | - | chr3_2:72445900-72445919 | Msa0422910:intron | 20.0% |
| !! | TTCTTTGTATAGGTATTATT+CGG | - | chr3_2:72445956-72445975 | Msa0422910:intron | 20.0% |
| !!! | GTTTTTAACCATATTAGAAA+AGG | - | chr3_2:72446173-72446192 | Msa0422910:intron | 20.0% |
| !!! | TCATATATCCTTTTCTAATA+TGG | + | chr3_2:72446184-72446203 | None:intergenic | 20.0% |
| !! | TACTAAAAAAATCTATCCTT+CGG | + | chr3_2:72446842-72446861 | None:intergenic | 20.0% |
| !!! | GATAGATTTTTTTAGTAGTA+AGG | - | chr3_2:72446845-72446864 | Msa0422910:CDS | 20.0% |
| !! | AGTTTAAATTTACCTATTTG+AGG | + | chr3_2:72446980-72446999 | None:intergenic | 20.0% |
| !! | GTTTATGATAAATCTACAAT+GGG | - | chr3_2:72447681-72447700 | Msa0422910:intron | 20.0% |
| !!! | TTTATTTGAAAAAGGCATAT+TGG | + | chr3_2:72447758-72447777 | None:intergenic | 20.0% |
| !! | CACTTGTATTTATTTGAAAA+AGG | + | chr3_2:72447766-72447785 | None:intergenic | 20.0% |
| !!! | TTTTATTATTTACCTTGTAG+GGG | - | chr3_2:72448257-72448276 | Msa0422910:CDS | 20.0% |
| ! | CATCAAGTTATTCATAAACA+TGG | - | chr3_2:72443612-72443631 | Msa0422910:CDS | 25.0% |
| ! | ATGTTGAAATCGATAAACAA+AGG | - | chr3_2:72443688-72443707 | Msa0422910:CDS | 25.0% |
| ! | TGGTAATAAAGCAAGAAAAT+TGG | - | chr3_2:72443758-72443777 | Msa0422910:CDS | 25.0% |
| ! | AATAAAGCAAGAAAATTGGA+TGG | - | chr3_2:72443762-72443781 | Msa0422910:CDS | 25.0% |
| ! | ACTTTATAATCATGAAGCAA+GGG | + | chr3_2:72443795-72443814 | None:intergenic | 25.0% |
| ! | AAAACTAAACATTGTTGTGA+AGG | + | chr3_2:72443837-72443856 | None:intergenic | 25.0% |
| !! | CTTGACTGATAATGAATTAA+AGG | + | chr3_2:72443970-72443989 | None:intergenic | 25.0% |
| !! | TAATTTTATTGCTAAACCAG+TGG | + | chr3_2:72444100-72444119 | None:intergenic | 25.0% |
| ! | AAAAGTGAGTTAACTTTAAC+GGG | - | chr3_2:72444120-72444139 | Msa0422910:intron | 25.0% |
| !! | TGTTGAATGTTATTTGATCT+TGG | + | chr3_2:72444461-72444480 | None:intergenic | 25.0% |
| ! | AACTTGATGTCTACAATATA+CGG | - | chr3_2:72444742-72444761 | Msa0422910:intron | 25.0% |
| !! | TTCTCCAAATTTTATGCAAA+TGG | - | chr3_2:72444909-72444928 | Msa0422910:intron | 25.0% |
| !! | CAATTAAAATCTTTTGACGA+TGG | + | chr3_2:72444957-72444976 | None:intergenic | 25.0% |
| !!! | GATTTTAATTGTCAATGAAG+GGG | - | chr3_2:72444966-72444985 | Msa0422910:intron | 25.0% |
| ! | AAAACAACAAAGCATATCTT+TGG | - | chr3_2:72445035-72445054 | Msa0422910:intron | 25.0% |
| ! | AAACAACAAAGCATATCTTT+GGG | - | chr3_2:72445036-72445055 | Msa0422910:intron | 25.0% |
| ! | TAGGTAAAAATCTAGATATG+AGG | - | chr3_2:72445075-72445094 | Msa0422910:intron | 25.0% |
| ! | AGGTAAAAATCTAGATATGA+GGG | - | chr3_2:72445076-72445095 | Msa0422910:intron | 25.0% |
| !! | TGTTTGGTTCATATTGATAA+TGG | + | chr3_2:72445197-72445216 | None:intergenic | 25.0% |
| !!! | ACAGTAGTTTTAAGAAGAAA+AGG | + | chr3_2:72445622-72445641 | None:intergenic | 25.0% |
| ! | TAACTGATTGATAAGTTTCT+AGG | + | chr3_2:72445835-72445854 | None:intergenic | 25.0% |
| ! | TTAACTTTAATGGTTTGATG+TGG | - | chr3_2:72445910-72445929 | Msa0422910:intron | 25.0% |
| ! | TCTATAACATCTTACTTTCT+TGG | + | chr3_2:72446407-72446426 | None:intergenic | 25.0% |
| !!! | TTTGTTTGCGCTTTTTTATA+GGG | + | chr3_2:72446749-72446768 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGCGCTTTTTTAT+AGG | + | chr3_2:72446750-72446769 | None:intergenic | 25.0% |
| !! | ATAAAAAAGCGCAAACAAAA+AGG | - | chr3_2:72446750-72446769 | Msa0422910:intron | 25.0% |
| !! | TAAAAAAGCGCAAACAAAAA+GGG | - | chr3_2:72446751-72446770 | Msa0422910:intron | 25.0% |
| !!! | TACACTATTGGTTTTTGTTT+GGG | + | chr3_2:72446887-72446906 | None:intergenic | 25.0% |
| !!! | TTACACTATTGGTTTTTGTT+TGG | + | chr3_2:72446888-72446907 | None:intergenic | 25.0% |
| !!! | TTAGTTTTTTATGATCTGCT+AGG | - | chr3_2:72447058-72447077 | Msa0422910:CDS | 25.0% |
| ! | TACTGAGCATTCATTATTAA+AGG | + | chr3_2:72447128-72447147 | None:intergenic | 25.0% |
| !!! | TATAGAAGTTTAAGTTGTGA+AGG | - | chr3_2:72447168-72447187 | Msa0422910:intron | 25.0% |
| !! | TATAGAAGTTTAAGATGTGA+AGG | - | chr3_2:72447213-72447232 | Msa0422910:intron | 25.0% |
| ! | ACTTCTTACTATTTCACTAA+AGG | + | chr3_2:72447330-72447349 | None:intergenic | 25.0% |
| !! | AGAAGATCCATACTTTTAAA+AGG | - | chr3_2:72447540-72447559 | Msa0422910:intron | 25.0% |
| !!! | GAAGATCCATACTTTTAAAA+GGG | - | chr3_2:72447541-72447560 | Msa0422910:intron | 25.0% |
| ! | GGTTTATGATAAATCTACAA+TGG | - | chr3_2:72447680-72447699 | Msa0422910:intron | 25.0% |
| ! | ATTGGCATTACAAATTACAA+AGG | + | chr3_2:72447740-72447759 | None:intergenic | 25.0% |
| ! | AGTTATTGTTACCAACAAAA+CGG | + | chr3_2:72447840-72447859 | None:intergenic | 25.0% |
| !!! | TTTTGTTGGTAACAATAACT+AGG | - | chr3_2:72447840-72447859 | Msa0422910:intron | 25.0% |
| ! | TTTATCTAGATGATACAAAG+AGG | + | chr3_2:72447886-72447905 | None:intergenic | 25.0% |
| ! | TATGAACGAACATTTATAGT+TGG | - | chr3_2:72447923-72447942 | Msa0422910:intron | 25.0% |
| !! | TTCTAGATTTGGCAATATTT+TGG | - | chr3_2:72447953-72447972 | Msa0422910:intron | 25.0% |
| !!! | CAGAGGTACAAAAATTATTT+TGG | - | chr3_2:72448152-72448171 | Msa0422910:CDS | 25.0% |
| !!! | ATTTATTTTCGACAAAGTTG+TGG | - | chr3_2:72448320-72448339 | Msa0422910:intron | 25.0% |
| !! | GTTTAAAATAAGTGAAGTTG+TGG | + | chr3_2:72448421-72448440 | None:intergenic | 25.0% |
| ACAATCATTCTTAGTTAGTG+AGG | + | chr3_2:72443443-72443462 | None:intergenic | 30.0% | |
| CTAAGAATGATTGTTATAGC+TGG | - | chr3_2:72443449-72443468 | Msa0422910:three_prime_UTR | 30.0% | |
| GAAATTACCTATCAAAGGAA+AGG | + | chr3_2:72443507-72443526 | None:intergenic | 30.0% | |
| GTTTCGAAATTACCTATCAA+AGG | + | chr3_2:72443512-72443531 | None:intergenic | 30.0% | |
| !!! | CTTGATGAATTTTGGTTTCA+GGG | + | chr3_2:72443599-72443618 | None:intergenic | 30.0% |
| !!! | ACTTGATGAATTTTGGTTTC+AGG | + | chr3_2:72443600-72443619 | None:intergenic | 30.0% |
| AGTTATTCATAAACATGGAC+TGG | - | chr3_2:72443617-72443636 | Msa0422910:CDS | 30.0% | |
| GTTATTCATAAACATGGACT+GGG | - | chr3_2:72443618-72443637 | Msa0422910:CDS | 30.0% | |
| ! | TTGAACACAAATCCAGATTT+TGG | - | chr3_2:72443657-72443676 | Msa0422910:CDS | 30.0% |
| !! | ACAAATCCAGATTTTGGTAA+TGG | - | chr3_2:72443663-72443682 | Msa0422910:CDS | 30.0% |
| ! | ACAAAGGAAAAGCTTTTATG+TGG | - | chr3_2:72443704-72443723 | Msa0422910:CDS | 30.0% |
| CTTTATTACCATTAATCAGC+GGG | + | chr3_2:72443749-72443768 | None:intergenic | 30.0% | |
| ! | GCTTTATTACCATTAATCAG+CGG | + | chr3_2:72443750-72443769 | None:intergenic | 30.0% |
| GACTTTATAATCATGAAGCA+AGG | + | chr3_2:72443796-72443815 | None:intergenic | 30.0% | |
| TGATTATAAAGTCACTGATG+TGG | - | chr3_2:72443803-72443822 | Msa0422910:CDS | 30.0% | |
| ATTATCAGTCAAGACTCAAA+AGG | - | chr3_2:72443977-72443996 | Msa0422910:intron | 30.0% | |
| TTATCAGTCAAGACTCAAAA+GGG | - | chr3_2:72443978-72443997 | Msa0422910:intron | 30.0% | |
| ! | AAAGGGTTTTCAGTAAAATC+AGG | - | chr3_2:72443995-72444014 | Msa0422910:intron | 30.0% |
| ! | AAATCACTAGGAGTATGATA+AGG | + | chr3_2:72444405-72444424 | None:intergenic | 30.0% |
| CTAAAATCAATTTCATTGCG+TGG | + | chr3_2:72444433-72444452 | None:intergenic | 30.0% | |
| !! | CACGCAATGAAATTGATTTT+AGG | - | chr3_2:72444431-72444450 | Msa0422910:intron | 30.0% |
| ! | ATTCAACAACGACATTTTCT+AGG | - | chr3_2:72444473-72444492 | Msa0422910:intron | 30.0% |
| ! | GTAGGTAATTTTCTGAGTTA+TGG | - | chr3_2:72444538-72444557 | Msa0422910:intron | 30.0% |
| GCTTCCATTTGCATAAAATT+TGG | + | chr3_2:72444916-72444935 | None:intergenic | 30.0% | |
| ATGGTATGAAATGAGATGTT+TGG | + | chr3_2:72445213-72445232 | None:intergenic | 30.0% | |
| ! | TTTTGGTATTAATAACCCTC+CGG | - | chr3_2:72445281-72445300 | Msa0422910:intron | 30.0% |
| TGTAAGGTTCTTGAAAAGTA+AGG | + | chr3_2:72445590-72445609 | None:intergenic | 30.0% | |
| CTCATAATTACACACTATCA+TGG | + | chr3_2:72445723-72445742 | None:intergenic | 30.0% | |
| ! | CATGATAGTGTGTAATTATG+AGG | - | chr3_2:72445721-72445740 | Msa0422910:intron | 30.0% |
| ! | TTCGACAAGAGTATATATGT+TGG | - | chr3_2:72445801-72445820 | Msa0422910:CDS | 30.0% |
| ! | ATTGATAAGTTTCTAGGTAC+AGG | + | chr3_2:72445829-72445848 | None:intergenic | 30.0% |
| ATCATTTACTTGGGAAACAA+AGG | - | chr3_2:72446001-72446020 | Msa0422910:intron | 30.0% | |
| TCATTTACTTGGGAAACAAA+GGG | - | chr3_2:72446002-72446021 | Msa0422910:intron | 30.0% | |
| TTTACTGCTACTATTCATGT+TGG | - | chr3_2:72446150-72446169 | Msa0422910:intron | 30.0% | |
| TTACTGCTACTATTCATGTT+GGG | - | chr3_2:72446151-72446170 | Msa0422910:intron | 30.0% | |
| ACGATGTAAACAAAGATGAT+GGG | - | chr3_2:72446354-72446373 | Msa0422910:intron | 30.0% | |
| TAACATCTTACTTTCTTGGA+TGG | + | chr3_2:72446403-72446422 | None:intergenic | 30.0% | |
| AAGAAGAGGATATTGTGTTA+GGG | + | chr3_2:72446594-72446613 | None:intergenic | 30.0% | |
| AAAGAAGAGGATATTGTGTT+AGG | + | chr3_2:72446595-72446614 | None:intergenic | 30.0% | |
| TTAGTATAGCAGAAAAGAAG+AGG | + | chr3_2:72446608-72446627 | None:intergenic | 30.0% | |
| ! | AAAAAAGCGCAAACAAAAAG+GGG | - | chr3_2:72446752-72446771 | Msa0422910:intron | 30.0% |
| !!! | ATTTTTTTAGTAGTAAGGGC+AGG | - | chr3_2:72446850-72446869 | Msa0422910:CDS | 30.0% |
| !!! | TTTTTTTAGTAGTAAGGGCA+GGG | - | chr3_2:72446851-72446870 | Msa0422910:CDS | 30.0% |
| AAAACCAATAGTGTAAAGAC+AGG | - | chr3_2:72446892-72446911 | Msa0422910:CDS | 30.0% | |
| TAAACCTGTCTTTACACTAT+TGG | + | chr3_2:72446899-72446918 | None:intergenic | 30.0% | |
| CTTCAGTAGAAAATGTAACA+AGG | + | chr3_2:72447010-72447029 | None:intergenic | 30.0% | |
| ! | CTTGTTACATTTTCTACTGA+AGG | - | chr3_2:72447008-72447027 | Msa0422910:CDS | 30.0% |
| ! | TTAAAAGCGTAATATGCTGA+CGG | + | chr3_2:72447359-72447378 | None:intergenic | 30.0% |
| ! | AAATTGTTTTCCAAGAGAGA+TGG | - | chr3_2:72447389-72447408 | Msa0422910:intron | 30.0% |
| AAGCATGTTTCACTTAAAAC+AGG | - | chr3_2:72447445-72447464 | Msa0422910:intron | 30.0% | |
| !!! | CATACTTTTAAAAGGGTGTT+GGG | - | chr3_2:72447548-72447567 | Msa0422910:intron | 30.0% |
| TCAGGTCTAAATCATAGAAT+CGG | - | chr3_2:72447619-72447638 | Msa0422910:intron | 30.0% | |
| GCAAATAGTATAAGACAAGA+CGG | - | chr3_2:72447659-72447678 | Msa0422910:intron | 30.0% | |
| AAATGTAAGGGTTTAAGGAA+GGG | + | chr3_2:72447712-72447731 | None:intergenic | 30.0% | |
| AAAATGTAAGGGTTTAAGGA+AGG | + | chr3_2:72447713-72447732 | None:intergenic | 30.0% | |
| ! | TTCCTTAAACCCTTACATTT+TGG | - | chr3_2:72447712-72447731 | Msa0422910:intron | 30.0% |
| ! | TTGGTCTCTTTTTCTAGATT+TGG | - | chr3_2:72447942-72447961 | Msa0422910:intron | 30.0% |
| !! | AGATTTGGCAATATTTTGGA+TGG | - | chr3_2:72447957-72447976 | Msa0422910:intron | 30.0% |
| !! | GATTTGGCAATATTTTGGAT+GGG | - | chr3_2:72447958-72447977 | Msa0422910:intron | 30.0% |
| !! | ATTTGGCAATATTTTGGATG+GGG | - | chr3_2:72447959-72447978 | Msa0422910:intron | 30.0% |
| TGGCAAGCTAAAAAATGATT+TGG | - | chr3_2:72448172-72448191 | Msa0422910:CDS | 30.0% | |
| AAAAAACAAAAGGAATGGTG+TGG | + | chr3_2:72448300-72448319 | None:intergenic | 30.0% | |
| TACTGAATACTACAAAGTCA+TGG | + | chr3_2:72448397-72448416 | None:intergenic | 30.0% | |
| ACCTATCAAAGGAAAGGAAA+GGG | + | chr3_2:72443501-72443520 | None:intergenic | 35.0% | |
| TACCTATCAAAGGAAAGGAA+AGG | + | chr3_2:72443502-72443521 | None:intergenic | 35.0% | |
| AAAAGTTACTCAACAGAACG+TGG | - | chr3_2:72443562-72443581 | Msa0422910:three_prime_UTR | 35.0% | |
| ACATTGCCATTACCAAAATC+TGG | + | chr3_2:72443672-72443691 | None:intergenic | 35.0% | |
| GGGAACAAGTATATGAAATC+TGG | + | chr3_2:72443937-72443956 | None:intergenic | 35.0% | |
| ! | TTCCTTTTGAGCAAGAATCT+TGG | - | chr3_2:72444019-72444038 | Msa0422910:intron | 35.0% |
| AACCAAGATTCTTGCTCAAA+AGG | + | chr3_2:72444024-72444043 | None:intergenic | 35.0% | |
| TTTGCCATAAACAACTGAAG+TGG | - | chr3_2:72444198-72444217 | Msa0422910:intron | 35.0% | |
| GATACCACTTCAGTTGTTTA+TGG | + | chr3_2:72444205-72444224 | None:intergenic | 35.0% | |
| ! | CTTCAAAGCTCAAGTTGTAA+AGG | - | chr3_2:72444262-72444281 | Msa0422910:intron | 35.0% |
| TTGTTTCCTGCAGTCATAAA+GGG | - | chr3_2:72444342-72444361 | Msa0422910:intron | 35.0% | |
| TTATAGCCAGTCAAGATTTC+AGG | + | chr3_2:72444724-72444743 | None:intergenic | 35.0% | |
| AAGAAATGTTTACGCCAACA+GGG | - | chr3_2:72444783-72444802 | Msa0422910:intron | 35.0% | |
| GAATGATATCACTGAACCAT+AGG | + | chr3_2:72444861-72444880 | None:intergenic | 35.0% | |
| !! | TCTACTAGGTAATGGGAAAT+TGG | - | chr3_2:72445005-72445024 | Msa0422910:intron | 35.0% |
| ! | GGGAACATTTTCTCTTTACT+AGG | - | chr3_2:72445056-72445075 | Msa0422910:intron | 35.0% |
| GACTAAAGATTGTTTCAGTC+AGG | - | chr3_2:72445364-72445383 | Msa0422910:intron | 35.0% | |
| !! | TAGTTAAGAACGGATTGTTC+AGG | + | chr3_2:72445407-72445426 | None:intergenic | 35.0% |
| ! | GAAAAGGTTGTGATGATGTA+AGG | + | chr3_2:72445606-72445625 | None:intergenic | 35.0% |
| TTGTCGCAGAATCATTTACT+TGG | - | chr3_2:72445991-72446010 | Msa0422910:intron | 35.0% | |
| TGTCGCAGAATCATTTACTT+GGG | - | chr3_2:72445992-72446011 | Msa0422910:intron | 35.0% | |
| ! | ATGCTGGCTGATAAAATTGA+TGG | - | chr3_2:72446263-72446282 | Msa0422910:intron | 35.0% |
| ! | TGCTGGCTGATAAAATTGAT+GGG | - | chr3_2:72446264-72446283 | Msa0422910:intron | 35.0% |
| ! | CATCATCTTTGTTTACATCG+TGG | + | chr3_2:72446355-72446374 | None:intergenic | 35.0% |
| CACGATGTAAACAAAGATGA+TGG | - | chr3_2:72446353-72446372 | Msa0422910:intron | 35.0% | |
| ATTTGAGAGTAAGGAAGGTT+TGG | + | chr3_2:72446566-72446585 | None:intergenic | 35.0% | |
| AATTCCAAAGAAAGAAGGTG+AGG | + | chr3_2:72446675-72446694 | None:intergenic | 35.0% | |
| !! | CACCTTCTTTCTTTGGAATT+AGG | - | chr3_2:72446675-72446694 | Msa0422910:intron | 35.0% |
| GACCTAATTCCAAAGAAAGA+AGG | + | chr3_2:72446680-72446699 | None:intergenic | 35.0% | |
| ! | AAAAAGCGCAAACAAAAAGG+GGG | - | chr3_2:72446753-72446772 | Msa0422910:intron | 35.0% |
| !!! | TTTTTTAGTAGTAAGGGCAG+GGG | - | chr3_2:72446852-72446871 | Msa0422910:CDS | 35.0% |
| TCTTAGTTGTGTCCTCAAAT+AGG | - | chr3_2:72446965-72446984 | Msa0422910:CDS | 35.0% | |
| CAGTAGAAAATGTAACAAGG+AGG | + | chr3_2:72447007-72447026 | None:intergenic | 35.0% | |
| ATAATGAATGCTCAGTAGTC+AGG | - | chr3_2:72447131-72447150 | Msa0422910:CDS | 35.0% | |
| TTAAGATGTGAAGGCAAACA+TGG | - | chr3_2:72447222-72447241 | Msa0422910:intron | 35.0% | |
| TACTATGATCACTTCTGTGA+GGG | + | chr3_2:72447307-72447326 | None:intergenic | 35.0% | |
| ATAGTCATGCATCATGATCT+AGG | - | chr3_2:72447422-72447441 | Msa0422910:intron | 35.0% | |
| !! | CCAACACCCTTTTAAAAGTA+TGG | + | chr3_2:72447550-72447569 | None:intergenic | 35.0% |
| !! | CCATACTTTTAAAAGGGTGT+TGG | - | chr3_2:72447547-72447566 | Msa0422910:intron | 35.0% |
| ! | AGAGTTGCTGATCTAGAATT+AGG | - | chr3_2:72447594-72447613 | Msa0422910:intron | 35.0% |
| GATTCTATGATTTAGACCTG+AGG | + | chr3_2:72447620-72447639 | None:intergenic | 35.0% | |
| AGCCAAAATGTAAGGGTTTA+AGG | + | chr3_2:72447717-72447736 | None:intergenic | 35.0% | |
| ACAAAGGAGCCAAAATGTAA+GGG | + | chr3_2:72447724-72447743 | None:intergenic | 35.0% | |
| TACAAAGGAGCCAAAATGTA+AGG | + | chr3_2:72447725-72447744 | None:intergenic | 35.0% | |
| !! | TGTTGGTAACAATAACTAGG+TGG | - | chr3_2:72447843-72447862 | Msa0422910:intron | 35.0% |
| !! | CAATATTTTGGATGGGGAAA+TGG | - | chr3_2:72447965-72447984 | Msa0422910:intron | 35.0% |
| ACCCTTTCCTTTCCTTTGAT+AGG | - | chr3_2:72443497-72443516 | Msa0422910:three_prime_UTR | 40.0% | |
| TTTCCATAGACTCCTCACTT+AGG | + | chr3_2:72443545-72443564 | None:intergenic | 40.0% | |
| !! | ATTCATAAACATGGACTGGG+AGG | - | chr3_2:72443621-72443640 | Msa0422910:CDS | 40.0% |
| ! | GTTGTTTCCTGCAGTCATAA+AGG | - | chr3_2:72444341-72444360 | Msa0422910:intron | 40.0% |
| TGTTTCCTGCAGTCATAAAG+GGG | - | chr3_2:72444343-72444362 | Msa0422910:intron | 40.0% | |
| ! | GACATTTTCTAGGTTACCTG+TGG | - | chr3_2:72444483-72444502 | Msa0422910:intron | 40.0% |
| ! | ATTTTCTAGGTTACCTGTGG+AGG | - | chr3_2:72444486-72444505 | Msa0422910:intron | 40.0% |
| CTGTTGGCGTAAACATTTCT+TGG | + | chr3_2:72444784-72444803 | None:intergenic | 40.0% | |
| CAAGAAATGTTTACGCCAAC+AGG | - | chr3_2:72444782-72444801 | Msa0422910:intron | 40.0% | |
| CTTTAGCATTTCTTCCCTGT+TGG | + | chr3_2:72444800-72444819 | None:intergenic | 40.0% | |
| TAGGACAGAACCATTGTTTC+CGG | + | chr3_2:72444842-72444861 | None:intergenic | 40.0% | |
| ! | GAAACAATGGTTCTGTCCTA+TGG | - | chr3_2:72444842-72444861 | Msa0422910:intron | 40.0% |
| AATGGAAGCTAGTCAAAGTG+AGG | - | chr3_2:72444927-72444946 | Msa0422910:intron | 40.0% | |
| ATGGAAGCTAGTCAAAGTGA+GGG | - | chr3_2:72444928-72444947 | Msa0422910:intron | 40.0% | |
| TTAATTGTCAATGAAGGGGC+TGG | - | chr3_2:72444970-72444989 | Msa0422910:intron | 40.0% | |
| TCTGTTGCTCTACTAGGTAA+TGG | - | chr3_2:72444997-72445016 | Msa0422910:intron | 40.0% | |
| CTGTTGCTCTACTAGGTAAT+GGG | - | chr3_2:72444998-72445017 | Msa0422910:intron | 40.0% | |
| ACCAAATTCCAGATTACCAG+GGG | + | chr3_2:72445323-72445342 | None:intergenic | 40.0% | |
| GACCAAATTCCAGATTACCA+GGG | + | chr3_2:72445324-72445343 | None:intergenic | 40.0% | |
| ! | CTGGTAATCTGGAATTTGGT+CGG | - | chr3_2:72445323-72445342 | Msa0422910:intron | 40.0% |
| ! | TGGTAATCTGGAATTTGGTC+GGG | - | chr3_2:72445324-72445343 | Msa0422910:intron | 40.0% |
| TTTCAGTCAGGATTTGAACC+CGG | - | chr3_2:72445376-72445395 | Msa0422910:intron | 40.0% | |
| TCAATTTGCAACCAAGCGAT+TGG | + | chr3_2:72445451-72445470 | None:intergenic | 40.0% | |
| !! | AATTGATGGGTACCGAAAAC+AGG | - | chr3_2:72446277-72446296 | Msa0422910:intron | 40.0% |
| ! | TCAAGCGCTTTTCCTGTTTT+CGG | + | chr3_2:72446292-72446311 | None:intergenic | 40.0% |
| AGGAGAGAACTACACTATGA+AGG | + | chr3_2:72446538-72446557 | None:intergenic | 40.0% | |
| AGAGGATATTGTGTTAGGGT+GGG | + | chr3_2:72446590-72446609 | None:intergenic | 40.0% | |
| AAGAGGATATTGTGTTAGGG+TGG | + | chr3_2:72446591-72446610 | None:intergenic | 40.0% | |
| CTATCCTCACCTTCTTTCTT+TGG | - | chr3_2:72446668-72446687 | Msa0422910:intron | 40.0% | |
| GAGACAGAAAGAATTGCATC+AGG | + | chr3_2:72446708-72446727 | None:intergenic | 40.0% | |
| GTCTCACATTTGAGTCCAAT+AGG | - | chr3_2:72446723-72446742 | Msa0422910:intron | 40.0% | |
| !!! | CGCTTTTTTATAGGGCCTAT+TGG | + | chr3_2:72446741-72446760 | None:intergenic | 40.0% |
| TCTGGACAATTTATGTGACC+TGG | - | chr3_2:72446805-72446824 | Msa0422910:intron | 40.0% | |
| GCTTGAAACTAAAGACAGTG+GGG | + | chr3_2:72446925-72446944 | None:intergenic | 40.0% | |
| GGCTTGAAACTAAAGACAGT+GGG | + | chr3_2:72446926-72446945 | None:intergenic | 40.0% | |
| AGGCTTGAAACTAAAGACAG+TGG | + | chr3_2:72446927-72446946 | None:intergenic | 40.0% | |
| ! | CTTTAGTTTCAAGCCTGCTT+TGG | - | chr3_2:72446931-72446950 | Msa0422910:CDS | 40.0% |
| ACTATGATCACTTCTGTGAG+GGG | + | chr3_2:72447306-72447325 | None:intergenic | 40.0% | |
| GTACTATGATCACTTCTGTG+AGG | + | chr3_2:72447308-72447327 | None:intergenic | 40.0% | |
| GATGCATGACTATCCAAACA+CGG | + | chr3_2:72447415-72447434 | None:intergenic | 40.0% | |
| !! | TCGTATTTTTGTGACCTTGC+AGG | + | chr3_2:72447503-72447522 | None:intergenic | 40.0% |
| !!! | ACTTTTAAAAGGGTGTTGGG+AGG | - | chr3_2:72447551-72447570 | Msa0422910:intron | 40.0% |
| !!! | CTTTTAAAAGGGTGTTGGGA+GGG | - | chr3_2:72447552-72447571 | Msa0422910:intron | 40.0% |
| ATCAGCAACTCTAACCATCA+TGG | + | chr3_2:72447586-72447605 | None:intergenic | 40.0% | |
| !!! | TCACACTTATGCCGTTTTGT+TGG | - | chr3_2:72447826-72447845 | Msa0422910:intron | 40.0% |
| ! | CACTAGAATACCAGTTTGCT+GGG | + | chr3_2:72448009-72448028 | None:intergenic | 40.0% |
| TGTCTACACATTAGCTGCTT+GGG | - | chr3_2:72448034-72448053 | Msa0422910:CDS | 40.0% | |
| ! | GATTCGTTCAAGCGCTTTTC+AGG | - | chr3_2:72443381-72443400 | Msa0422910:three_prime_UTR | 45.0% |
| ! | TTCAGGTTCGCTTTCTCACT+AGG | - | chr3_2:72443398-72443417 | Msa0422910:three_prime_UTR | 45.0% |
| ACCAAAACTCCTCCTAAGTG+AGG | - | chr3_2:72443530-72443549 | Msa0422910:three_prime_UTR | 45.0% | |
| ! | TCCTCACTTAGGAGGAGTTT+TGG | + | chr3_2:72443534-72443553 | None:intergenic | 45.0% |
| ! | TTGTTGCACCCGCTGATTAA+TGG | - | chr3_2:72443738-72443757 | Msa0422910:CDS | 45.0% |
| GTGGACAAACAGGAATTAGC+AGG | + | chr3_2:72444081-72444100 | None:intergenic | 45.0% | |
| GCTAATTCCTGTTTGTCCAC+TGG | - | chr3_2:72444081-72444100 | Msa0422910:intron | 45.0% | |
| TGCTAAACCAGTGGACAAAC+AGG | + | chr3_2:72444091-72444110 | None:intergenic | 45.0% | |
| TGCGTGGTCGAAAAATCACT+AGG | + | chr3_2:72444417-72444436 | None:intergenic | 45.0% | |
| ATGTCACATCTGCTTCTACG+AGG | - | chr3_2:72444691-72444710 | Msa0422910:intron | 45.0% | |
| GGTGATTCTGTTGCTCTACT+AGG | - | chr3_2:72444991-72445010 | Msa0422910:intron | 45.0% | |
| AGGGCTTGATCAAGTGATAG+TGG | - | chr3_2:72445095-72445114 | Msa0422910:intron | 45.0% | |
| CGACCAAATTCCAGATTACC+AGG | + | chr3_2:72445325-72445344 | None:intergenic | 45.0% | |
| ! | ACGGATTGTTCAGGAGAAAC+CGG | + | chr3_2:72445398-72445417 | None:intergenic | 45.0% |
| !! | AAGGGCTGTGAAGTTTGTTG+TGG | - | chr3_2:72446020-72446039 | Msa0422910:intron | 45.0% |
| !! | GTGAAGTTTGTTGTGGATGC+TGG | - | chr3_2:72446027-72446046 | Msa0422910:intron | 45.0% |
| ! | TTTGTTGTGGATGCTGGTAC+TGG | - | chr3_2:72446033-72446052 | Msa0422910:intron | 45.0% |
| GACTTGCAGCACTTTGCTTA+GGG | - | chr3_2:72446076-72446095 | Msa0422910:intron | 45.0% | |
| TGACTGCATATACCTCCCAT+GGG | + | chr3_2:72446244-72446263 | None:intergenic | 45.0% | |
| ATGACTGCATATACCTCCCA+TGG | + | chr3_2:72446245-72446264 | None:intergenic | 45.0% | |
| !! | AAGATGATGGGATTGTGCAC+TGG | - | chr3_2:72446366-72446385 | Msa0422910:intron | 45.0% |
| !! | AGATGATGGGATTGTGCACT+GGG | - | chr3_2:72446367-72446386 | Msa0422910:intron | 45.0% |
| TCTAGTTGCTGCAAAGTCTG+TGG | + | chr3_2:72446466-72446485 | None:intergenic | 45.0% | |
| AGATACCCCCAATGAGTCAA+TGG | - | chr3_2:72446510-72446529 | Msa0422910:intron | 45.0% | |
| !! | AAGGAGCCATTGACTCATTG+GGG | + | chr3_2:72446519-72446538 | None:intergenic | 45.0% |
| !! | GAAGGAGCCATTGACTCATT+GGG | + | chr3_2:72446520-72446539 | None:intergenic | 45.0% |
| !! | TGAAGGAGCCATTGACTCAT+TGG | + | chr3_2:72446521-72446540 | None:intergenic | 45.0% |
| !! | GTAAGGAAGGTTTGGCTTTG+AGG | + | chr3_2:72446558-72446577 | None:intergenic | 45.0% |
| TGGGGATTTGAGAGTAAGGA+AGG | + | chr3_2:72446571-72446590 | None:intergenic | 45.0% | |
| GAGGATATTGTGTTAGGGTG+GGG | + | chr3_2:72446589-72446608 | None:intergenic | 45.0% | |
| GAAAGAATTGCATCAGGTGC+TGG | + | chr3_2:72446702-72446721 | None:intergenic | 45.0% | |
| TCAAGCCTGCTTTGGTTGTA+AGG | - | chr3_2:72446939-72446958 | Msa0422910:CDS | 45.0% | |
| GAGTTCCTTACAACCAAAGC+AGG | + | chr3_2:72446947-72446966 | None:intergenic | 45.0% | |
| TGATCTGCTAGGATGCTAGA+AGG | - | chr3_2:72447069-72447088 | Msa0422910:CDS | 45.0% | |
| CAATAAGCATAGCTCCTGCA+AGG | - | chr3_2:72447486-72447505 | Msa0422910:intron | 45.0% | |
| ! | CTGATCTAGAATTAGGCCTC+AGG | - | chr3_2:72447601-72447620 | Msa0422910:intron | 45.0% |
| CCACTAGAATACCAGTTTGC+TGG | + | chr3_2:72448010-72448029 | None:intergenic | 45.0% | |
| CCAGCAAACTGGTATTCTAG+TGG | - | chr3_2:72448007-72448026 | Msa0422910:CDS | 45.0% | |
| CAAGCAGCTAATGTGTAGAC+AGG | + | chr3_2:72448035-72448054 | None:intergenic | 45.0% | |
| CTGTCTACACATTAGCTGCT+TGG | - | chr3_2:72448033-72448052 | Msa0422910:CDS | 45.0% | |
| CTCTTCGCTAGAAAGAAGCA+TGG | + | chr3_2:72448066-72448085 | None:intergenic | 45.0% | |
| GAATGAAGACAGAGCAGAAG+TGG | - | chr3_2:72448085-72448104 | Msa0422910:CDS | 45.0% | |
| ! | GAAGTGGTGATGCTTCATAC+TGG | - | chr3_2:72448101-72448120 | Msa0422910:CDS | 45.0% |
| ! | CTTCATACTGGAGGCACATT+GGG | - | chr3_2:72448113-72448132 | Msa0422910:CDS | 45.0% |
| CCATAGACTCCTCACTTAGG+AGG | + | chr3_2:72443542-72443561 | None:intergenic | 50.0% | |
| CCTCCTAAGTGAGGAGTCTA+TGG | - | chr3_2:72443539-72443558 | Msa0422910:three_prime_UTR | 50.0% | |
| TCCTGCAGTCATAAAGGGGA+AGG | - | chr3_2:72444347-72444366 | Msa0422910:intron | 50.0% | |
| CCTGCAGTCATAAAGGGGAA+GGG | - | chr3_2:72444348-72444367 | Msa0422910:intron | 50.0% | |
| CTGCAGTCATAAAGGGGAAG+GGG | - | chr3_2:72444349-72444368 | Msa0422910:intron | 50.0% | |
| TGCAGTCATAAAGGGGAAGG+GGG | - | chr3_2:72444350-72444369 | Msa0422910:intron | 50.0% | |
| CCTACCAATAGCAGCTGTGT+GGG | + | chr3_2:72444523-72444542 | None:intergenic | 50.0% | |
| ACCTACCAATAGCAGCTGTG+TGG | + | chr3_2:72444524-72444543 | None:intergenic | 50.0% | |
| GAGCAGCCTGAAATCTTGAC+TGG | - | chr3_2:72444715-72444734 | Msa0422910:intron | 50.0% | |
| AAAGAGCTATGCCGAGTCAG+TGG | - | chr3_2:72444816-72444835 | Msa0422910:intron | 50.0% | |
| ! | ATTGTTTCCGGCCACTGACT+CGG | + | chr3_2:72444830-72444849 | None:intergenic | 50.0% |
| ! | GCCCCTGGTAATCTGGAATT+TGG | - | chr3_2:72445319-72445338 | Msa0422910:intron | 50.0% |
| ! | ATCTGGAATTTGGTCGGGAG+AGG | - | chr3_2:72445329-72445348 | Msa0422910:intron | 50.0% |
| CGGATTGTTCAGGAGAAACC+GGG | + | chr3_2:72445397-72445416 | None:intergenic | 50.0% | |
| ACCACTTGAGTCCAATCGCT+TGG | - | chr3_2:72445437-72445456 | Msa0422910:CDS | 50.0% | |
| ACCAAGCGATTGGACTCAAG+TGG | + | chr3_2:72445441-72445460 | None:intergenic | 50.0% | |
| ! | GGCACAACAGCAGTTGGTAT+AGG | - | chr3_2:72446054-72446073 | Msa0422910:intron | 50.0% |
| GGACTTGCAGCACTTTGCTT+AGG | - | chr3_2:72446075-72446094 | Msa0422910:intron | 50.0% | |
| TTGCAGCACTTTGCTTAGGG+TGG | - | chr3_2:72446079-72446098 | Msa0422910:intron | 50.0% | |
| TGCAGCACTTTGCTTAGGGT+GGG | - | chr3_2:72446080-72446099 | Msa0422910:intron | 50.0% | |
| ! | GGAGGTATATGCAGTCATGC+TGG | - | chr3_2:72446247-72446266 | Msa0422910:intron | 50.0% |
| !! | AGGAGCCATTGACTCATTGG+GGG | + | chr3_2:72446518-72446537 | None:intergenic | 50.0% |
| AGGGTGGGGATTTGAGAGTA+AGG | + | chr3_2:72446575-72446594 | None:intergenic | 50.0% | |
| ! | TCCAGATGCACTGATGTCGA+GGG | + | chr3_2:72446791-72446810 | None:intergenic | 50.0% |
| !! | TTAAAAGGGTGTTGGGAGGG+AGG | - | chr3_2:72447555-72447574 | Msa0422910:intron | 50.0% |
| CAGCAAATTGCCCAGCAAAC+TGG | - | chr3_2:72447996-72448015 | Msa0422910:CDS | 50.0% | |
| CACATTAGCTGCTTGGGAAG+CGG | - | chr3_2:72448040-72448059 | Msa0422910:CDS | 50.0% | |
| ! | GTGGTGATGCTTCATACTGG+AGG | - | chr3_2:72448104-72448123 | Msa0422910:CDS | 50.0% |
| ! | GCTTCATACTGGAGGCACAT+TGG | - | chr3_2:72448112-72448131 | Msa0422910:CDS | 50.0% |
| ! | GAGGCACATTGGGCTTGTTT+GGG | - | chr3_2:72448123-72448142 | Msa0422910:CDS | 50.0% |
| ! | CACATTGGGCTTGTTTGGGT+TGG | - | chr3_2:72448127-72448146 | Msa0422910:CDS | 50.0% |
| TACCTTGTAGGGGTAAGTCG+TGG | - | chr3_2:72448267-72448286 | Msa0422910:CDS | 50.0% | |
| CCCTTCCCCTTTATGACTGC+AGG | + | chr3_2:72444351-72444370 | None:intergenic | 55.0% | |
| AGTGCCCACACAGCTGCTAT+TGG | - | chr3_2:72444516-72444535 | Msa0422910:intron | 55.0% | |
| CCCACACAGCTGCTATTGGT+AGG | - | chr3_2:72444520-72444539 | Msa0422910:intron | 55.0% | |
| GCTGTTCTGTGTGCTGAGAG+AGG | - | chr3_2:72444664-72444683 | Msa0422910:intron | 55.0% | |
| GAGTCAGTGGCCGGAAACAA+TGG | - | chr3_2:72444829-72444848 | Msa0422910:intron | 55.0% | |
| AATAACCCTCCGGTTCCCAG+TGG | - | chr3_2:72445291-72445310 | Msa0422910:intron | 55.0% | |
| TCTTTCCACTGGGAACCGGA+GGG | + | chr3_2:72445299-72445318 | None:intergenic | 55.0% | |
| TACCAGGGGCTCTTTCCACT+GGG | + | chr3_2:72445309-72445328 | None:intergenic | 55.0% | |
| TTACCAGGGGCTCTTTCCAC+TGG | + | chr3_2:72445310-72445329 | None:intergenic | 55.0% | |
| GGAAAGAGCCCCTGGTAATC+TGG | - | chr3_2:72445312-72445331 | Msa0422910:intron | 55.0% | |
| !! | GGTACTGGCACAACAGCAGT+TGG | - | chr3_2:72446048-72446067 | Msa0422910:intron | 55.0% |
| TGCTTCTGTGCAGACTCCCA+TGG | - | chr3_2:72446225-72446244 | Msa0422910:intron | 55.0% | |
| GCTTCTGTGCAGACTCCCAT+GGG | - | chr3_2:72446226-72446245 | Msa0422910:intron | 55.0% | |
| TGATGGGATTGTGCACTGGG+TGG | - | chr3_2:72446370-72446389 | Msa0422910:intron | 55.0% | |
| ACCCTCGACATCAGTGCATC+TGG | - | chr3_2:72446787-72446806 | Msa0422910:intron | 55.0% | |
| ! | GTCCAGATGCACTGATGTCG+AGG | + | chr3_2:72446792-72446811 | None:intergenic | 55.0% |
| CCAAACACGGCCATCTCTCT+TGG | + | chr3_2:72447402-72447421 | None:intergenic | 55.0% | |
| CCAAGAGAGATGGCCGTGTT+TGG | - | chr3_2:72447399-72447418 | Msa0422910:intron | 55.0% | |
| ! | GGAGGCACATTGGGCTTGTT+TGG | - | chr3_2:72448122-72448141 | Msa0422910:CDS | 55.0% |
| !! | GCTTGTTTGGGTTGGCACAG+AGG | - | chr3_2:72448135-72448154 | Msa0422910:CDS | 55.0% |
| AGCCACGACTTACCCCTACA+AGG | + | chr3_2:72448272-72448291 | None:intergenic | 55.0% | |
| GGCACTCTGACAACCTCCAC+AGG | + | chr3_2:72444502-72444521 | None:intergenic | 60.0% | |
| AGCTATGCCGAGTCAGTGGC+CGG | - | chr3_2:72444820-72444839 | Msa0422910:intron | 60.0% | |
| CTCTTTCCACTGGGAACCGG+AGG | + | chr3_2:72445300-72445319 | None:intergenic | 60.0% | |
| GGGCTCTTTCCACTGGGAAC+CGG | + | chr3_2:72445303-72445322 | None:intergenic | 60.0% | |
| TTCCCAGTGGAAAGAGCCCC+TGG | - | chr3_2:72445304-72445323 | Msa0422910:intron | 60.0% | |
| TCTGTGCAGACTCCCATGGG+AGG | - | chr3_2:72446229-72446248 | Msa0422910:intron | 60.0% | |
| GGAGGGAGGCTTTGCCATGA+TGG | - | chr3_2:72447569-72447588 | Msa0422910:intron | 60.0% | |
| ! | CCTTCGGAAAGCGCGCATCC+AGG | + | chr3_2:72446826-72446845 | None:intergenic | 65.0% |
| CCTGGATGCGCGCTTTCCGA+AGG | - | chr3_2:72446823-72446842 | Msa0422910:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 72443370 | 72448450 | 72443370 | ID=Msa0422910;Name=Msa0422910 |
| chr3_2 | mRNA | 72443370 | 72448450 | 72443370 | ID=Msa0422910-mRNA-1;Parent=Msa0422910;Name=Msa0422910-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|1|0.85|1|1|1|7|239|428 |
| chr3_2 | exon | 72443370 | 72443861 | 72443370 | ID=Msa0422910-mRNA-1:exon:17915;Parent=Msa0422910-mRNA-1 |
| chr3_2 | exon | 72445409 | 72445582 | 72445409 | ID=Msa0422910-mRNA-1:exon:17914;Parent=Msa0422910-mRNA-1 |
| chr3_2 | exon | 72445723 | 72445852 | 72445723 | ID=Msa0422910-mRNA-1:exon:17913;Parent=Msa0422910-mRNA-1 |
| chr3_2 | exon | 72446808 | 72447155 | 72446808 | ID=Msa0422910-mRNA-1:exon:17912;Parent=Msa0422910-mRNA-1 |
| chr3_2 | exon | 72447283 | 72447325 | 72447283 | ID=Msa0422910-mRNA-1:exon:17911;Parent=Msa0422910-mRNA-1 |
| chr3_2 | exon | 72447996 | 72448301 | 72447996 | ID=Msa0422910-mRNA-1:exon:17910;Parent=Msa0422910-mRNA-1 |
| chr3_2 | exon | 72448418 | 72448450 | 72448418 | ID=Msa0422910-mRNA-1:exon:17909;Parent=Msa0422910-mRNA-1 |
| chr3_2 | CDS | 72448418 | 72448450 | 72448418 | ID=Msa0422910-mRNA-1:cds;Parent=Msa0422910-mRNA-1 |
| chr3_2 | CDS | 72447996 | 72448301 | 72447996 | ID=Msa0422910-mRNA-1:cds;Parent=Msa0422910-mRNA-1 |
| chr3_2 | CDS | 72447283 | 72447325 | 72447283 | ID=Msa0422910-mRNA-1:cds;Parent=Msa0422910-mRNA-1 |
| chr3_2 | CDS | 72446808 | 72447155 | 72446808 | ID=Msa0422910-mRNA-1:cds;Parent=Msa0422910-mRNA-1 |
| chr3_2 | CDS | 72445723 | 72445852 | 72445723 | ID=Msa0422910-mRNA-1:cds;Parent=Msa0422910-mRNA-1 |
| chr3_2 | CDS | 72445409 | 72445582 | 72445409 | ID=Msa0422910-mRNA-1:cds;Parent=Msa0422910-mRNA-1 |
| chr3_2 | CDS | 72443609 | 72443861 | 72443609 | ID=Msa0422910-mRNA-1:cds;Parent=Msa0422910-mRNA-1 |
| chr3_2 | three_prime_UTR | 72443370 | 72443608 | 72443370 | ID=Msa0422910-mRNA-1:three_prime_utr;Parent=Msa0422910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
