AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0628500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0628500 MtrunA17_Chr4g0004331 98.590 851 12 0 1 851 1 851 0.0 1737
Msa0628500 MtrunA17_Chr2g0331901 78.953 860 170 4 1 851 1 858 0.0 1382
Msa0628500 MtrunA17_Chr3g0098761 49.235 784 348 7 1 780 1 738 0.0 775
Msa0628500 MtrunA17_Chr5g0444001 57.864 515 206 3 1 512 1 507 0.0 624
Msa0628500 MtrunA17_Chr4g0073741 28.571 707 392 15 4 689 9 623 1.26e-83 281
Msa0628500 MtrunA17_Chr7g0262821 34.475 438 271 4 4 438 10 434 4.23e-82 276
Msa0628500 MtrunA17_Chr7g0223181 34.703 438 270 4 4 438 10 434 4.93e-82 276
Msa0628500 MtrunA17_Chr7g0223291 34.703 438 270 4 4 438 10 434 1.07e-81 276
Msa0628500 MtrunA17_Chr4g0031301 34.018 438 273 4 4 438 10 434 4.19e-81 274
Msa0628500 MtrunA17_Chr4g0031321 33.790 438 274 4 4 438 10 434 2.29e-79 269
Msa0628500 MtrunA17_Chr6g0462601 36.543 405 253 3 4 405 10 413 1.14e-78 267
Msa0628500 MtrunA17_Chr6g0462771 33.860 443 272 5 4 438 10 439 1.56e-77 264
Msa0628500 MtrunA17_Chr8g0388671 32.186 494 297 9 2 491 37 496 1.89e-77 265
Msa0628500 MtrunA17_Chr8g0388761 36.387 382 236 4 2 381 37 413 3.11e-76 261
Msa0628500 MtrunA17_Chr7g0223711 33.409 440 276 5 4 439 10 436 8.46e-76 259
Msa0628500 MtrunA17_Chr7g0225671 33.860 443 277 7 4 442 17 447 1.00e-75 259
Msa0628500 MtrunA17_Chr6g0462641 33.933 445 269 6 4 438 10 439 3.44e-75 259
Msa0628500 MtrunA17_Chr6g0462681 35.381 407 255 5 4 405 10 413 4.74e-75 258
Msa0628500 MtrunA17_Chr6g0462711 33.333 438 270 6 4 432 11 435 5.41e-75 258
Msa0628500 MtrunA17_Chr8g0350731 34.043 470 273 9 4 465 38 478 7.63e-75 257
Msa0628500 MtrunA17_Chr2g0298851 33.182 440 278 5 4 439 10 437 3.29e-74 254
Msa0628500 MtrunA17_Chr7g0223751 33.560 441 274 6 4 439 10 436 4.71e-74 254
Msa0628500 MtrunA17_Chr7g0223031 33.941 439 273 7 4 438 10 435 8.35e-74 253
Msa0628500 MtrunA17_Chr2g0298861 31.440 493 291 9 3 480 9 469 9.81e-74 253
Msa0628500 MtrunA17_Chr7g0233311 34.974 386 245 5 4 385 10 393 1.32e-73 253
Msa0628500 MtrunA17_Chr7g0223701 33.937 442 273 6 4 439 10 438 2.31e-73 253
Msa0628500 MtrunA17_Chr3g0120101 27.273 836 523 22 2 780 25 832 3.22e-73 257
Msa0628500 MtrunA17_Chr7g0221661 34.545 440 271 6 4 439 10 436 4.63e-73 251
Msa0628500 MtrunA17_Chr5g0427901 33.559 444 267 7 4 432 10 440 5.46e-73 251
Msa0628500 MtrunA17_Chr7g0223781 33.708 445 270 6 4 441 10 436 1.19e-72 250
Msa0628500 MtrunA17_Chr2g0284681 30.597 536 338 9 4 526 9 523 1.23e-72 249
Msa0628500 MtrunA17_Chr7g0248131 34.411 433 267 5 4 431 10 430 2.42e-72 249
Msa0628500 MtrunA17_Chr7g0223821 33.333 432 274 5 4 431 10 431 2.43e-72 251
Msa0628500 MtrunA17_Chr2g0293581 33.636 440 275 5 4 439 11 437 2.75e-72 249
Msa0628500 MtrunA17_Chr2g0299921 35.620 379 240 2 4 381 1030 1405 4.03e-72 259
Msa0628500 MtrunA17_Chr2g0299921 33.168 404 258 5 4 405 1414 1807 3.17e-60 223
Msa0628500 MtrunA17_Chr7g0223741 33.258 442 278 5 4 441 10 438 6.49e-72 248
Msa0628500 MtrunA17_Chr7g0223851 33.796 432 270 6 4 431 19 438 1.24e-71 248
Msa0628500 MtrunA17_Chr7g0223801 33.636 440 272 8 4 438 10 434 6.00e-71 245
Msa0628500 MtrunA17_Chr7g0223731 34.028 432 268 6 4 431 10 428 6.31e-71 245
Msa0628500 MtrunA17_Chr7g0223721 32.512 406 269 5 4 405 10 414 6.65e-71 245
Msa0628500 MtrunA17_Chr2g0296391 32.794 433 272 6 4 431 10 428 3.48e-70 241
Msa0628500 MtrunA17_Chr4g0040931 34.278 388 245 6 4 385 10 393 1.16e-69 242
Msa0628500 MtrunA17_Chr2g0293601 32.697 419 277 4 4 418 10 427 2.10e-69 238
Msa0628500 MtrunA17_Chr7g0233301 33.766 385 251 4 4 385 10 393 1.95e-68 238
Msa0628500 MtrunA17_Chr2g0299791 35.356 379 241 2 4 381 1043 1418 2.94e-68 247
Msa0628500 MtrunA17_Chr7g0248151 33.480 454 276 9 4 450 10 444 4.28e-68 238
Msa0628500 MtrunA17_Chr2g0279901 34.559 408 249 5 3 405 56 450 6.54e-68 238
Msa0628500 MtrunA17_Chr7g0223621 31.900 442 282 6 2 438 8 435 2.14e-67 236
Msa0628500 MtrunA17_Chr2g0299851 34.565 379 244 2 4 381 1039 1414 7.60e-67 243
Msa0628500 MtrunA17_Chr2g0287631 31.818 462 296 7 4 460 10 457 2.93e-66 233
Msa0628500 MtrunA17_Chr4g0049501 32.353 408 259 5 3 405 53 448 4.98e-65 230
Msa0628500 MtrunA17_Chr2g0293561 33.973 365 235 4 4 364 10 372 1.49e-64 221
Msa0628500 MtrunA17_Chr2g0331381 32.488 434 250 8 2 431 5 399 4.10e-64 223
Msa0628500 MtrunA17_Chr2g0299821 32.750 400 261 4 4 398 10 406 7.87e-64 222
Msa0628500 MtrunA17_Chr7g0223631 32.731 443 266 7 4 442 10 424 5.77e-63 223
Msa0628500 MtrunA17_Chr6g0462611 36.070 341 212 4 68 405 24 361 2.87e-62 221
Msa0628500 MtrunA17_Chr7g0217971 32.266 406 246 6 4 405 10 390 1.14e-61 219
Msa0628500 MtrunA17_Chr2g0299881 33.854 384 246 3 3 381 1038 1418 5.60e-61 225
Msa0628500 MtrunA17_Chr4g0012541 32.727 385 246 5 4 385 10 384 6.61e-60 214
Msa0628500 MtrunA17_Chr7g0215261 29.148 446 266 8 4 446 10 408 2.38e-56 204
Msa0628500 MtrunA17_Chr2g0277021 28.884 502 323 10 3 494 71 548 1.37e-55 204
Msa0628500 MtrunA17_Chr7g0228281 32.326 331 221 3 4 332 71 400 1.58e-54 200
Msa0628500 MtrunA17_Chr1g0151991 35.145 276 174 4 4 276 10 283 1.85e-54 190
Msa0628500 MtrunA17_Chr7g0223831 30.273 403 248 6 4 402 10 383 2.02e-54 199
Msa0628500 MtrunA17_Chr7g0223541 32.609 368 229 5 68 431 33 385 3.35e-54 198
Msa0628500 MtrunA17_Chr8g0390821 30.243 453 245 11 4 401 12 448 7.36e-52 192
Msa0628500 MtrunA17_Chr7g0223681 33.237 346 216 4 88 431 7 339 2.51e-51 189
Msa0628500 MtrunA17_Chr6g0462861 28.358 469 300 10 4 467 10 447 8.60e-48 181
Msa0628500 MtrunA17_Chr7g0245521 34.470 264 170 3 4 265 10 272 3.98e-47 169
Msa0628500 MtrunA17_Chr2g0293271 28.649 370 207 5 15 381 45 360 3.27e-43 162
Msa0628500 MtrunA17_Chr1g0166551 26.812 414 225 8 4 413 6 345 3.97e-40 155
Msa0628500 MtrunA17_Chr5g0444011 40.306 196 101 3 595 781 1 189 2.23e-37 139
Msa0628500 MtrunA17_Chr6g0462791 39.106 179 107 2 100 278 1 177 1.17e-34 130
Msa0628500 MtrunA17_Chr7g0223671 38.378 185 113 1 68 252 10 193 2.35e-34 130
Msa0628500 MtrunA17_Chr1g0188601 37.037 189 116 2 88 275 5 191 8.71e-34 128
Msa0628500 MtrunA17_Chr6g0462631 29.582 311 171 6 99 405 29 295 1.96e-32 127
Msa0628500 MtrunA17_Chr6g0462751 26.901 342 187 7 68 404 21 304 1.30e-27 114
Msa0628500 MtrunA17_Chr5g0394391 25.105 474 316 11 4 465 30 476 1.81e-27 118
Msa0628500 MtrunA17_Chr7g0223861 40.152 132 78 1 70 201 4 134 2.61e-26 105
Msa0628500 MtrunA17_Chr7g0223771 33.557 149 98 1 88 236 4 151 1.38e-22 95.5
Msa0628500 MtrunA17_Chr4g0046881 35.294 136 84 2 133 268 20 151 4.70e-21 90.5
Msa0628500 MtrunA17_Chr7g0223761 29.817 218 129 8 238 447 7 208 4.11e-20 92.8
Msa0628500 MtrunA17_Chr4g0064621 23.770 488 314 16 4 465 141 596 5.91e-20 95.1
Msa0628500 MtrunA17_Chr4g0060241 22.984 496 291 17 4 465 21 459 7.62e-19 91.3
Msa0628500 MtrunA17_Chr6g0462701 32.934 167 83 4 99 263 29 168 6.30e-17 79.3
Msa0628500 MtrunA17_Chr6g0481391 29.752 121 82 1 30 150 13 130 8.67e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0628500 AT1G79930.1 75.117 852 189 6 1 850 1 831 0.0 1323
Msa0628500 AT1G79930.2 78.005 782 169 2 1 781 1 780 0.0 1287
Msa0628500 AT1G79920.1 78.135 654 138 3 1 653 1 650 0.0 1070
Msa0628500 AT1G79920.3 78.287 654 137 3 1 653 1 650 0.0 1053
Msa0628500 AT1G79920.2 78.287 654 137 3 1 653 1 650 0.0 1053
Msa0628500 AT1G79920.4 78.287 654 137 3 1 653 1 650 0.0 1053
Msa0628500 AT1G11660.4 48.407 816 362 9 1 812 1 761 0.0 766
Msa0628500 AT1G11660.3 48.407 816 362 9 1 812 1 761 0.0 766
Msa0628500 AT1G11660.1 48.407 816 362 9 1 812 1 761 0.0 766
Msa0628500 AT1G11660.2 46.983 779 354 9 38 812 1 724 0.0 702
Msa0628500 AT1G16030.1 36.207 406 255 3 4 406 9 413 7.28e-84 282
Msa0628500 AT5G02500.2 36.675 379 238 2 4 381 10 387 1.17e-81 272
Msa0628500 AT5G02500.1 34.247 438 272 4 4 438 10 434 1.40e-81 276
Msa0628500 AT3G12580.1 34.247 438 272 4 4 438 10 434 3.20e-81 275
Msa0628500 AT1G09080.2 34.261 467 275 7 2 465 41 478 1.60e-80 273
Msa0628500 AT1G09080.1 34.261 467 275 7 2 465 51 488 3.79e-80 272
Msa0628500 AT3G09440.1 35.468 406 258 3 4 406 10 414 5.10e-80 271
Msa0628500 AT3G09440.4 35.468 406 258 3 4 406 10 414 5.10e-80 271
Msa0628500 AT3G09440.2 35.468 406 258 3 4 406 10 414 5.10e-80 271
Msa0628500 AT3G09440.3 35.468 406 258 3 4 406 10 414 5.10e-80 271
Msa0628500 AT4G16660.1 26.852 864 566 25 2 824 25 863 9.64e-79 273
Msa0628500 AT4G16660.2 26.852 864 566 25 2 824 49 887 1.69e-78 273
Msa0628500 AT5G02490.1 34.729 406 261 3 4 406 10 414 1.80e-77 265
Msa0628500 AT1G56410.1 34.913 401 257 3 4 401 10 409 3.65e-77 263
Msa0628500 AT5G42020.2 35.602 382 239 4 2 381 36 412 2.38e-76 260
Msa0628500 AT5G42020.1 35.602 382 239 4 2 381 36 412 2.38e-76 262
Msa0628500 AT5G28540.1 31.377 494 301 9 2 491 36 495 3.01e-76 261
Msa0628500 AT5G42020.3 35.602 382 239 4 2 381 41 417 5.89e-76 261
Msa0628500 AT5G09590.1 33.333 408 255 5 3 405 59 454 1.21e-64 230
Msa0628500 AT4G37910.1 33.681 383 239 4 3 380 54 426 1.35e-64 230
Msa0628500 AT4G37910.2 33.681 383 239 4 3 380 54 426 1.35e-64 230
Msa0628500 AT5G49910.1 29.283 502 321 10 3 494 80 557 1.84e-55 204
Msa0628500 AT4G24280.1 29.482 502 320 10 3 494 80 557 7.99e-54 199
Msa0628500 AT2G32120.1 25.670 448 293 12 4 438 31 451 7.52e-23 104
Msa0628500 AT2G32120.2 25.670 448 293 12 4 438 31 451 7.52e-23 104

Find 251 sgRNAs with CRISPR-Local

Find 434 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCCTTCTCTACAGCTTTC+TGG 0.169253 4_3:+9200097 None:intergenic
AGTACAGGGTTGGCATATTT+TGG 0.188014 4_3:+9199251 None:intergenic
CTAGGCGTTTCTATGGATTT+TGG 0.191053 4_3:-9197851 Msa0628500:three_prime_UTR
GTTTAAAGTGCGAGAATTTC+AGG 0.197715 4_3:-9201772 Msa0628500:intron
TCACAGATTAAGAGACTTAT+TGG 0.198402 4_3:-9202728 Msa0628500:CDS
ATGCGAGAAGAGAGAAAATT+AGG 0.205133 4_3:+9203226 None:intergenic
GGAACTGAGTCTCCCGATTT+TGG 0.205616 4_3:-9202009 Msa0628500:CDS
ATACAAGTTCTGCCTAATTT+TGG 0.208919 4_3:-9198306 Msa0628500:exon
ATCTGTGAAATTGAATTCTT+AGG 0.221421 4_3:+9202743 None:intergenic
CCTGTATTTGAGTTGGTTTA+TGG 0.236565 4_3:-9200141 Msa0628500:CDS
TTGCATTGCTGGGTTTAAAA+AGG 0.245544 4_3:-9202297 Msa0628500:CDS
CCTCTTACCACCACACATTT+AGG 0.245585 4_3:+9198025 None:intergenic
GCAGCTGGCTTGGCTGGCCT+TGG 0.246271 4_3:+9198481 None:intergenic
AGTATGCAGGTTTGCATTGC+TGG 0.252485 4_3:-9202308 Msa0628500:CDS
GAGGCAAAATTACGCTCTTT+AGG 0.253728 4_3:-9198006 Msa0628500:three_prime_UTR
AATTTATATGATATATTTCC+AGG 0.256884 4_3:-9197977 Msa0628500:three_prime_UTR
TCTGTTTCCAGCACAAATTC+TGG 0.262257 4_3:+9198205 None:intergenic
GATGTCAATGTGATCAAATT+TGG 0.266864 4_3:+9199438 None:intergenic
CAATTAATATACTTGGTCTT+TGG 0.267140 4_3:-9198104 Msa0628500:three_prime_UTR
GGTGAAAAGCAGCGGTTTAT+TGG 0.278241 4_3:-9202797 Msa0628500:CDS
CTAGGGCTTGTTTGAGGCTT+AGG 0.278551 4_3:-9202148 Msa0628500:CDS
GATTCAGGCTCCAAAGAAAA+AGG 0.278669 4_3:-9200181 Msa0628500:intron
AGGTTCTTTAGCTGATTCTT+TGG 0.280369 4_3:+9200905 None:intergenic
TTGGATGCTGCAACTATTGC+TGG 0.304244 4_3:-9202452 Msa0628500:CDS
CCCTTAACACGCTCCAAAAT+CGG 0.304974 4_3:+9201996 None:intergenic
TGTGAAGTGAGATTTGATTT+AGG 0.308320 4_3:-9202946 Msa0628500:five_prime_UTR
TGTGGAGCAGCTGGCTTGGC+TGG 0.312263 4_3:+9198475 None:intergenic
GGCCCCTCAGTCACACTAAA+AGG 0.317946 4_3:+9202659 None:intergenic
GTTGATTCAGGCGCGTTACT+TGG 0.323624 4_3:-9202624 Msa0628500:CDS
CCATCAAGCACTCAATGTTC+AGG 0.324389 4_3:+9202075 None:intergenic
TCTCTTCTCGCATCGGTAAC+AGG 0.328098 4_3:-9203216 Msa0628500:intron
ATGGTTGAGGTCGTTGGTTC+AGG 0.339402 4_3:-9201921 Msa0628500:CDS
AATGCAATTGAAACACAAAA+TGG 0.340545 4_3:+9197932 None:intergenic
ATCTTCCACCTCCTGAAGTT+TGG 0.342681 4_3:+9199836 None:intergenic
CTAAATCAAGAACCAAAATT+AGG 0.343941 4_3:+9198294 None:intergenic
CGGTTAATGATTGTTGTATT+GGG 0.346126 4_3:-9202514 Msa0628500:CDS
GTTGCATGTGATTGTCATCT+AGG 0.346619 4_3:-9197869 Msa0628500:three_prime_UTR
AGGTCTTACCGCCAAACTTC+AGG 0.351909 4_3:-9199847 Msa0628500:CDS
GATACCCCTGGGGTTGAAAA+TGG 0.358565 4_3:-9200786 Msa0628500:CDS
GGTGGTGTTTGTGGAGCAGC+TGG 0.366617 4_3:+9198466 None:intergenic
CCACCAAGCCCAGCTTCTTC+AGG 0.368080 4_3:-9198448 Msa0628500:CDS
TATACTTGGTCTTTGGAATC+CGG 0.369023 4_3:-9198097 Msa0628500:three_prime_UTR
GCGGTTAATGATTGTTGTAT+TGG 0.371071 4_3:-9202515 Msa0628500:CDS
AGTGTGGTGGGATTTGATTT+TGG 0.371159 4_3:-9202917 Msa0628500:CDS
GATCAGTTCAACTATTGTAT+AGG 0.373877 4_3:-9199493 Msa0628500:CDS
GGATGGGTATCCGTTGATTC+AGG 0.375321 4_3:-9202636 Msa0628500:CDS
TCTCTTGCGTGGAAAGGTTC+TGG 0.375632 4_3:-9201436 Msa0628500:CDS
CCTGAACATTGAGTGCTTGA+TGG 0.375798 4_3:-9202075 Msa0628500:CDS
ACTTATTGGGAAATTGTATT+CGG 0.377395 4_3:-9202714 Msa0628500:CDS
TTGTCATCTAGGCGTTTCTA+TGG 0.381595 4_3:-9197858 Msa0628500:three_prime_UTR
GCAGGCTTATCTCCAGTCTC+AGG 0.386041 4_3:+9200759 None:intergenic
TCAATGTTCAGGGGCACTAT+AGG 0.392727 4_3:+9202086 None:intergenic
TTGATTCAGGCGCGTTACTT+GGG 0.393987 4_3:-9202623 Msa0628500:CDS
TAGGGCTTGTTTGAGGCTTA+GGG 0.394993 4_3:-9202147 Msa0628500:CDS
TGGAGATAAGCCTGCACAAA+TGG 0.399671 4_3:-9200751 Msa0628500:CDS
CACAGATTAAGAGACTTATT+GGG 0.399675 4_3:-9202727 Msa0628500:CDS
CTTATCAGTTTCCATTGGTT+CGG 0.399968 4_3:+9198336 None:intergenic
CAAGTGTTTGCGATGATGTT+GGG 0.400721 4_3:-9202575 Msa0628500:CDS
ATGTCAATGTGATCAAATTT+GGG 0.402743 4_3:+9199439 None:intergenic
CAAAATTATAATTCAAATCC+TGG 0.405371 4_3:+9197959 None:intergenic
CAGACAAGCCTTTGGGTAGT+TGG 0.405900 4_3:-9197800 Msa0628500:three_prime_UTR
TCTTTGTAACGCTCTTCAAT+CGG 0.406125 4_3:+9199541 None:intergenic
TTAAGATCACGCTGCAAATC+CGG 0.406813 4_3:+9202689 None:intergenic
CACATTCAACTGATCATTCT+CGG 0.406952 4_3:+9202355 None:intergenic
CAAACTTGAAGAGCTCAAAA+AGG 0.408125 4_3:-9199766 Msa0628500:intron
GCTGGGCTTGGTGGTGTTTG+TGG 0.408450 4_3:+9198457 None:intergenic
TGTTGGCACATTCGTTTGAT+AGG 0.409037 4_3:-9202262 Msa0628500:CDS
TGTTTGTGGAGCAGCTGGCT+TGG 0.413861 4_3:+9198471 None:intergenic
CATTCGTTTGATAGGTCTCT+TGG 0.414355 4_3:-9202254 Msa0628500:CDS
TGCGAGAAGAGAGAAAATTA+GGG 0.415326 4_3:+9203227 None:intergenic
TTGATAGGTCTCTTGGTGGT+AGG 0.416362 4_3:-9202247 Msa0628500:CDS
TCATCAGCCTCCATCTTAGT+AGG 0.417156 4_3:+9200885 None:intergenic
GGAGCGTGTTAAGGGACCTT+TGG 0.417447 4_3:-9201988 Msa0628500:CDS
TGCTCAGAACCTGAAGAAGC+TGG 0.418521 4_3:+9198439 None:intergenic
ATCAAGTTTGTGACGAAACT+TGG 0.421504 4_3:-9198270 Msa0628500:three_prime_UTR
TTGAAGCTGAGAACTGGCTT+CGG 0.422084 4_3:-9199301 Msa0628500:CDS
TGGGAAATTGTATTCGGATC+CGG 0.423083 4_3:-9202708 Msa0628500:CDS
TAGGCAGAACTTGTATTCTC+TGG 0.423288 4_3:+9198313 None:intergenic
CTTTGTAACGCTCTTCAATC+GGG 0.425307 4_3:+9199542 None:intergenic
TGAAGCTGAGAACTGGCTTC+GGG 0.427858 4_3:-9199300 Msa0628500:CDS
TGCCGGTGATAGTGAAAATC+AGG 0.429504 4_3:-9198374 Msa0628500:CDS
TTATTAATCAGACAAGCCTT+TGG 0.429643 4_3:-9197808 Msa0628500:three_prime_UTR
CATGAAGCGTGATGAGTTTG+AGG 0.430974 4_3:-9202030 Msa0628500:CDS
CCTAAATGTGTGGTGGTAAG+AGG 0.435267 4_3:-9198025 Msa0628500:three_prime_UTR
AGGGAACTCTGCTGATTGTC+GGG 0.435972 4_3:+9201391 None:intergenic
GAAAATGGCGTCCCTGAGAC+TGG 0.438289 4_3:-9200771 Msa0628500:CDS
GGTCCACTATCCTGTGCATC+TGG 0.438800 4_3:+9201412 None:intergenic
ACTGCGACTGCATTGGCGTA+TGG 0.440488 4_3:-9202398 Msa0628500:CDS
GGTCCAGATGCACAGGATAG+TGG 0.443881 4_3:-9201415 Msa0628500:CDS
CCCTTTAGCAACACATTCAC+TGG 0.444886 4_3:+9201827 None:intergenic
TTCTGAGCAGCAGCAACCTC+AGG 0.445059 4_3:-9198425 Msa0628500:CDS
TAAGTTTCAATTAATATACT+TGG 0.446497 4_3:-9198111 Msa0628500:three_prime_UTR
GCTGGAAACAGAGGCTGGGG+TGG 0.446577 4_3:-9198194 Msa0628500:three_prime_UTR
CCAGTGAATGTGTTGCTAAA+GGG 0.447787 4_3:-9201827 Msa0628500:CDS
GTATGCAGGTTTGCATTGCT+GGG 0.449595 4_3:-9202307 Msa0628500:CDS
ATCACTGTATTGTGCATCAA+TGG 0.452941 4_3:+9201300 None:intergenic
ATTTCAGCTACCAAGAGTAC+AGG 0.453568 4_3:+9199236 None:intergenic
GAACCTGAAGAAGCTGGGCT+TGG 0.453663 4_3:+9198445 None:intergenic
CAGCGGTTTATTGGTACTGC+TGG 0.456748 4_3:-9202788 Msa0628500:CDS
CTAATGCTAGGGCTTGTTTG+AGG 0.456848 4_3:-9202154 Msa0628500:CDS
TCTGGCTTATCAGTTTCCAT+TGG 0.458886 4_3:+9198331 None:intergenic
CTCAGTTGATGATATACATA+TGG 0.460366 4_3:-9201940 Msa0628500:CDS
CTGCGACTGCATTGGCGTAT+GGG 0.462294 4_3:-9202397 Msa0628500:CDS
ATATGCCAACCCTGTACTCT+TGG 0.462978 4_3:-9199246 Msa0628500:CDS
CCTTAACACGCTCCAAAATC+GGG 0.464429 4_3:+9201997 None:intergenic
CCATAAACCAACTCAAATAC+AGG 0.464941 4_3:+9200141 None:intergenic
CTGGAAACAGAGGCTGGGGT+GGG 0.465781 4_3:-9198193 Msa0628500:three_prime_UTR
TATTAATCAGACAAGCCTTT+GGG 0.466523 4_3:-9197807 Msa0628500:three_prime_UTR
GGAGGTGCAGCAGCATCAGC+AGG 0.467276 4_3:+9200858 None:intergenic
CCTGAAGAAGCTGGGCTTGG+TGG 0.467776 4_3:+9198448 None:intergenic
AACTTCAGGAGGTGGAAGAT+TGG 0.468425 4_3:-9199833 Msa0628500:CDS
TGATAGGTCTCTTGGTGGTA+GGG 0.470808 4_3:-9202246 Msa0628500:CDS
GATGGATGAGAAGGATGTAA+AGG 0.470909 4_3:-9202057 Msa0628500:CDS
AACATCGGCATCATTGCCAT+TGG 0.473099 4_3:+9200836 None:intergenic
CTGGCATTCATTGTTCGCCT+AGG 0.478263 4_3:+9201846 None:intergenic
GAAACAGAGGCTGGGGTGGG+TGG 0.479019 4_3:-9198190 Msa0628500:three_prime_UTR
ATTCTCGCACTTTAAACGTT+GGG 0.479102 4_3:+9201778 None:intergenic
GTCAAGATCTTGTTTATAGC+GGG 0.480702 4_3:+9201888 None:intergenic
AGCTAAAGAACCTACTAAGA+TGG 0.482114 4_3:-9200895 Msa0628500:CDS
ATGCAATTGAAACACAAAAT+GGG 0.482304 4_3:+9197933 None:intergenic
ACACCGGCGATTGTATGTTT+CGG 0.482700 4_3:-9202818 Msa0628500:CDS
TGGGGTGGGTGGACAGTGAG+TGG 0.483482 4_3:-9198179 Msa0628500:three_prime_UTR
CAGTGCCTTGATACTTGGTA+TGG 0.485274 4_3:+9201348 None:intergenic
ATGGATGAGAAGGATGTAAA+GGG 0.486619 4_3:-9202056 Msa0628500:CDS
TGTAGAGAAGGAGTATGAAA+TGG 0.486906 4_3:-9200088 Msa0628500:CDS
TCGATCTCTCTTGCGTGGAA+AGG 0.486937 4_3:-9201442 Msa0628500:CDS
AAGGGAACTCTGCTGATTGT+CGG 0.487246 4_3:+9201390 None:intergenic
AAATGTTCCTGTATTTGAGT+TGG 0.487806 4_3:-9200148 Msa0628500:CDS
CAGAAGCAATAACAAACTCT+TGG 0.487898 4_3:+9199877 None:intergenic
GAGAGGGCACTTGCTGAAGC+AGG 0.489088 4_3:-9201966 Msa0628500:CDS
AATGTGTTGAAGCTGAGAAC+TGG 0.490675 4_3:-9199307 Msa0628500:CDS
AACCCCAGGGGTATCAGCAT+TGG 0.491129 4_3:+9200794 None:intergenic
AATGTCAGTGCCTTGATACT+TGG 0.493388 4_3:+9201343 None:intergenic
AGAAAGCTGAGGCTATTGAT+AGG 0.496044 4_3:-9199208 Msa0628500:intron
CTTGGTATGGGATTACCCTT+CGG 0.500024 4_3:+9201361 None:intergenic
TTGATGTGCTTTCTAATGCT+AGG 0.501055 4_3:-9202166 Msa0628500:CDS
GTGGAGCCCTCTATGTTGGT+TGG 0.506039 4_3:-9198139 Msa0628500:three_prime_UTR
AAGGCCAATGCTGATACCCC+TGG 0.506668 4_3:-9200798 Msa0628500:CDS
TTCCACCTCCTGAAGTTTGG+CGG 0.509008 4_3:+9199839 None:intergenic
TTTGTGCTGGAAACAGAGGC+TGG 0.509839 4_3:-9198199 Msa0628500:three_prime_UTR
TCATCAACATCCATTTGTGC+AGG 0.510057 4_3:+9200741 None:intergenic
TGATTCAGGCGCGTTACTTG+GGG 0.510635 4_3:-9202622 Msa0628500:CDS
ACATCGGCATCATTGCCATT+GGG 0.515949 4_3:+9200837 None:intergenic
TGAATCAACGGATACCCATC+CGG 0.516053 4_3:+9202638 None:intergenic
GTATATGTGCTGATCCTAGC+AGG 0.517263 4_3:+9201259 None:intergenic
TATTGGACATGCTAGTATGC+AGG 0.517493 4_3:-9202321 Msa0628500:CDS
AAGTAACGCGCCTGAATCAA+CGG 0.518110 4_3:+9202626 None:intergenic
GGTGGAAGATTGGCTATATG+AGG 0.519643 4_3:-9199823 Msa0628500:CDS
CTTTCTCGATCTCTCTTGCG+TGG 0.521989 4_3:-9201447 Msa0628500:CDS
TGAAGCAAAACAAAGCGAAA+AGG 0.522150 4_3:-9201142 Msa0628500:CDS
TGATGTGCTTTCTAATGCTA+GGG 0.522764 4_3:-9202165 Msa0628500:CDS
ATCAGTTTCCATTGGTTCGG+TGG 0.523299 4_3:+9198339 None:intergenic
TCTGCAGAGAAGGGCTGTGT+TGG 0.525414 4_3:-9202471 Msa0628500:CDS
AGTGTGACTGAGGGGCCGGA+TGG 0.526235 4_3:-9202653 Msa0628500:CDS
GCACTGACATTCTACAGGTC+AGG 0.527666 4_3:-9201331 Msa0628500:CDS
TGATGTGGAGCCCTCTATGT+TGG 0.529283 4_3:-9198143 Msa0628500:three_prime_UTR
ATACATATGGTTGAGGTCGT+TGG 0.529466 4_3:-9201927 Msa0628500:CDS
CTGGCATTCGCATCTGCCTG+AGG 0.530048 4_3:+9198409 None:intergenic
TGAATTGCCAGAATTTGTGC+TGG 0.532764 4_3:-9198212 Msa0628500:three_prime_UTR
CATCAAGCACTCAATGTTCA+GGG 0.533005 4_3:+9202076 None:intergenic
TGAGTTGGTTTATGGAGCAA+TGG 0.534242 4_3:-9200133 Msa0628500:CDS
GATGCTGCTGCACCTCCCAA+TGG 0.535559 4_3:-9200852 Msa0628500:CDS
CACAATACAGTGATGTGAAT+GGG 0.537676 4_3:-9201291 Msa0628500:CDS
ATCAGCATCCACCGAACCAA+TGG 0.537800 4_3:-9198347 Msa0628500:CDS
GCCAGTGAATGTGTTGCTAA+AGG 0.538861 4_3:-9201828 Msa0628500:CDS
TCGGGAGAAGAAGCAGCAGC+AGG 0.539054 4_3:-9199282 Msa0628500:CDS
GTTATTGCTTCTGAGAGGGA+AGG 0.539666 4_3:-9199867 Msa0628500:CDS
AGGTTCTGGTCCAGATGCAC+AGG 0.540609 4_3:-9201422 Msa0628500:CDS
GGCGTATGGGATTTATAAGA+CGG 0.541632 4_3:-9202384 Msa0628500:CDS
CACGCAAGAGAGATCGAGAA+AGG 0.542572 4_3:+9201448 None:intergenic
TACCGCCAAACTTCAGGAGG+TGG 0.542676 4_3:-9199841 Msa0628500:CDS
AGGCCAATGCTGATACCCCT+GGG 0.543001 4_3:-9200797 Msa0628500:CDS
AGCTACCAAGAGTACAGGGT+TGG 0.551709 4_3:+9199241 None:intergenic
TTTAGGAAGATGAGTGTGGT+GGG 0.552167 4_3:-9202929 Msa0628500:exon
AATTCTCGCACTTTAAACGT+TGG 0.552663 4_3:+9201777 None:intergenic
TGGAATTGCATCTGTTGACT+TGG 0.553100 4_3:-9201085 Msa0628500:CDS
TGAGACTACTGCGACTGCAT+TGG 0.554932 4_3:-9202405 Msa0628500:CDS
ACATTCAACTGATCATTCTC+GGG 0.555300 4_3:+9202356 None:intergenic
TGCATCTTGCATATTAACAT+CGG 0.555671 4_3:+9200821 None:intergenic
TAACAAACCAACCAACATAG+AGG 0.556876 4_3:+9198132 None:intergenic
TCGTTTGATAGGTCTCTTGG+TGG 0.557357 4_3:-9202251 Msa0628500:CDS
TAATCCCATACCAAGTATCA+AGG 0.557852 4_3:-9201353 Msa0628500:CDS
TCAGCAAGTGCCCTCTCCAA+AGG 0.562650 4_3:+9201972 None:intergenic
GTGTGACTGAGGGGCCGGAT+GGG 0.563247 4_3:-9202652 Msa0628500:CDS
TGTCCAGAAAGCTGTAGAGA+AGG 0.563256 4_3:-9200100 Msa0628500:CDS
AAAGTTCGTTTGAATGTGCA+TGG 0.566959 4_3:-9201105 Msa0628500:CDS
ACAAGTGTTTGCGATGATGT+TGG 0.568815 4_3:-9202576 Msa0628500:CDS
TCAAGGCACTGACATTCTAC+AGG 0.569028 4_3:-9201336 Msa0628500:CDS
GGCTGCTGATATGTTTGATG+TGG 0.570139 4_3:-9198158 Msa0628500:three_prime_UTR
GTTTGTTATTGCTTCTGAGA+GGG 0.573168 4_3:-9199871 Msa0628500:CDS
AGTGCCTTGATACTTGGTAT+GGG 0.576049 4_3:+9201349 None:intergenic
TGATGATATACATATGGTTG+AGG 0.576135 4_3:-9201934 Msa0628500:CDS
GCTCAGAACCTGAAGAAGCT+GGG 0.578895 4_3:+9198440 None:intergenic
TGAATCTAAGCGCGAAACAC+CGG 0.579103 4_3:-9202834 Msa0628500:CDS
TTACAAAGAATACGAGGAGA+GGG 0.583230 4_3:-9199527 Msa0628500:CDS
ACAGCTTTCTGGACATCCAC+AGG 0.584968 4_3:+9200108 None:intergenic
AAAGGGGCAGCTGAAAGTGT+TGG 0.585816 4_3:-9202279 Msa0628500:CDS
ATGGGCAGCAAACACCTGCT+AGG 0.589422 4_3:-9201273 Msa0628500:CDS
CAGGCTTATCTCCAGTCTCA+GGG 0.589925 4_3:+9200760 None:intergenic
TTGTGCTGGAAACAGAGGCT+GGG 0.593117 4_3:-9198198 Msa0628500:three_prime_UTR
TGTCAAGATCTTGTTTATAG+CGG 0.593239 4_3:+9201887 None:intergenic
TTTCAGCTACCAAGAGTACA+GGG 0.595228 4_3:+9199237 None:intergenic
GCACAATACAGTGATGTGAA+TGG 0.596418 4_3:-9201292 Msa0628500:CDS
CAGTGAATGTGTTGCTAAAG+GGG 0.601231 4_3:-9201826 Msa0628500:CDS
ATTTAGGAAGATGAGTGTGG+TGG 0.601857 4_3:-9202930 Msa0628500:exon
TGTTAATATGCAAGATGCAA+AGG 0.605432 4_3:-9200817 Msa0628500:CDS
TTGATTTAGGAAGATGAGTG+TGG 0.606515 4_3:-9202933 Msa0628500:exon
TGTGCTGGAAACAGAGGCTG+GGG 0.607303 4_3:-9198197 Msa0628500:three_prime_UTR
TCACCGAAACATACAATCGC+CGG 0.608089 4_3:+9202815 None:intergenic
CTGCCTTCCTAAATGTGTGG+TGG 0.609023 4_3:-9198032 Msa0628500:three_prime_UTR
TTACCACCACACATTTAGGA+AGG 0.610979 4_3:+9198029 None:intergenic
ATCATCGCAAACACTTGTGT+CGG 0.611173 4_3:+9202581 None:intergenic
TGTTAAGGGACCTTTGGAGA+GGG 0.612287 4_3:-9201982 Msa0628500:CDS
GGCTTTGCAAGATCGAGTGA+TGG 0.615036 4_3:-9200067 Msa0628500:CDS
TGTTTATGACATGAGAAACA+AGG 0.615667 4_3:-9200007 Msa0628500:intron
AACAAACCAACCAACATAGA+GGG 0.620326 4_3:+9198133 None:intergenic
TTGCTGTTGCAAGACAGAGA+GGG 0.620512 4_3:-9202877 Msa0628500:CDS
GTGTTAAGGGACCTTTGGAG+AGG 0.621914 4_3:-9201983 Msa0628500:CDS
GTCTCATGAAGCAAACGAAG+CGG 0.624822 4_3:+9202422 None:intergenic
TTTGCAAGATCGAGTGATGG+AGG 0.625261 4_3:-9200064 Msa0628500:CDS
GCCAGCGCCAGTGAAAATGC+CGG 0.625279 4_3:-9198391 Msa0628500:CDS
ATATAGAGAATCTGGTAGAG+TGG 0.626230 4_3:+9203412 None:intergenic
AGTTTGTTATTGCTTCTGAG+AGG 0.628219 4_3:-9199872 Msa0628500:CDS
TTATGGAGCAATGGCACCTG+TGG 0.628257 4_3:-9200124 Msa0628500:CDS
TCGAGTGATGGAGGAAACAA+AGG 0.628430 4_3:-9200055 Msa0628500:CDS
GAAGATTGGCTATATGAGGA+TGG 0.628823 4_3:-9199819 Msa0628500:CDS
AAGTGTTTGCGATGATGTTG+GGG 0.632627 4_3:-9202574 Msa0628500:CDS
TGAAATAAGAAAGAAAGCTG+AGG 0.633462 4_3:-9199219 Msa0628500:CDS
GATGGTGAAGACGAAACTAA+AGG 0.634901 4_3:-9199801 Msa0628500:CDS
TGAGTGCTTGATGGATGAGA+AGG 0.638629 4_3:-9202066 Msa0628500:CDS
TAAAGAACCTACTAAGATGG+AGG 0.638832 4_3:-9200892 Msa0628500:CDS
TGAGAAGAATCTTAATGCTG+CGG 0.646076 4_3:-9202534 Msa0628500:CDS
GATGATGTTGGGGAACATGA+AGG 0.646841 4_3:-9202564 Msa0628500:CDS
TATGTTTCGGTGAAAAGCAG+CGG 0.648758 4_3:-9202805 Msa0628500:CDS
GTTCTGCCTTCCTAAATGTG+TGG 0.651964 4_3:-9198035 Msa0628500:three_prime_UTR
TGACATCAACGAGAAACAGA+AGG 0.653492 4_3:-9199422 Msa0628500:intron
TGCAGATCAGTAAAATAACA+CGG 0.656278 4_3:+9202488 None:intergenic
GATTCAGGCGCGTTACTTGG+GGG 0.656470 4_3:-9202621 Msa0628500:CDS
GTTGCTGTTGCAAGACAGAG+AGG 0.659317 4_3:-9202878 Msa0628500:CDS
AGAATTTGTGCTGGAAACAG+AGG 0.662519 4_3:-9198203 Msa0628500:three_prime_UTR
TCGGCATCATTGCCATTGGG+AGG 0.662977 4_3:+9200840 None:intergenic
TCTTACCGCCAAACTTCAGG+AGG 0.672541 4_3:-9199844 Msa0628500:CDS
ATCAAGCACTCAATGTTCAG+GGG 0.677519 4_3:+9202077 None:intergenic
CGAGAATGATCAGTTGAATG+TGG 0.678179 4_3:-9202354 Msa0628500:CDS
TCACAATACCAACTACCCAA+AGG 0.679552 4_3:+9197792 None:intergenic
GTTACAAAGAATACGAGGAG+AGG 0.694230 4_3:-9199528 Msa0628500:CDS
AGCCGATTATGACAAAACCA+AGG 0.696648 4_3:-9198498 Msa0628500:CDS
AATGGATGTTGATGATACCA+AGG 0.715432 4_3:-9200733 Msa0628500:intron
TACAAAGAATACGAGGAGAG+GGG 0.716724 4_3:-9199526 Msa0628500:CDS
AGAGCGTTACAAAGAATACG+AGG 0.735698 4_3:-9199533 Msa0628500:CDS
GGCCAATGCTGATACCCCTG+GGG 0.739246 4_3:-9200796 Msa0628500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTATTATTGTTTTTATTAT+TGG - chr4_3:9198167-9198186 Msa0628500:three_prime_UTR 10.0%
!!! TATAAATATATCGTTTTAAA+AGG - chr4_3:9202165-9202184 Msa0628500:CDS 10.0%
!! TAAATAGTATGAATATTATT+GGG + chr4_3:9202348-9202367 None:intergenic 10.0%
!! ATAAATAGTATGAATATTAT+TGG + chr4_3:9202349-9202368 None:intergenic 10.0%
!!! TCAAAATATATATTTTGAAT+AGG - chr4_3:9202677-9202696 Msa0628500:CDS 10.0%
!!! AAAAATTGTTTTTGGAATTT+AGG + chr4_3:9197889-9197908 None:intergenic 15.0%
!!! TAATAGACAAAAATTGTTTT+TGG + chr4_3:9197897-9197916 None:intergenic 15.0%
!!! TTTTAGTATTTTTTATCACA+TGG - chr4_3:9199999-9200018 Msa0628500:intron 15.0%
!!! TAAAACTTTAGAAAGAAAAA+GGG - chr4_3:9201510-9201529 Msa0628500:intron 15.0%
!!! AATAAATTACAACCATTTTA+TGG + chr4_3:9201837-9201856 None:intergenic 15.0%
!! TAATATAAAAACATTAAGCA+AGG + chr4_3:9202319-9202338 None:intergenic 15.0%
!! TAAGTTTCAATTAATATACT+TGG - chr4_3:9203094-9203113 Msa0628500:intron 15.0%
!! AATTTATATGATATATTTCC+AGG - chr4_3:9203228-9203247 Msa0628500:five_prime_UTR 15.0%
!!! GTTTTTTTGTTTCTGTAAAT+GGG + chr4_3:9197827-9197846 None:intergenic 20.0%
!!! TGTTTTTTTGTTTCTGTAAA+TGG + chr4_3:9197828-9197847 None:intergenic 20.0%
!!! ATAATGCTAAGATTTAGAAT+CGG + chr4_3:9198071-9198090 None:intergenic 20.0%
!! TCAAAATTCATTATTCCTAA+AGG + chr4_3:9199547-9199566 None:intergenic 20.0%
!! AAATTAAAAGACTTGTCAAA+TGG + chr4_3:9199978-9199997 None:intergenic 20.0%
!! TAAAATCATAAATGCACAAT+AGG + chr4_3:9200193-9200212 None:intergenic 20.0%
!! CAAAAATTGATATTGGATTA+TGG + chr4_3:9200973-9200992 None:intergenic 20.0%
!!! TCAACAACATATTTTGATTT+TGG + chr4_3:9201006-9201025 None:intergenic 20.0%
!!! GTAAAACTTTAGAAAGAAAA+AGG - chr4_3:9201509-9201528 Msa0628500:intron 20.0%
!! AAGCAAAATAGTATATTAAC+CGG + chr4_3:9202124-9202143 None:intergenic 20.0%
!!! TCATACTATTTATGTTTTCT+AGG - chr4_3:9202356-9202375 Msa0628500:CDS 20.0%
!! TCATATAAATACATTAAGCA+AGG + chr4_3:9202398-9202417 None:intergenic 20.0%
!! AATTGAAGATAATTATGTGT+CGG + chr4_3:9202516-9202535 None:intergenic 20.0%
!! ATTAATAGTGATAAGAATAC+AGG + chr4_3:9202617-9202636 None:intergenic 20.0%
!! CAAAATTATAATTCAAATCC+TGG + chr4_3:9203249-9203268 None:intergenic 20.0%
! AGAAAAAGATATAGAGAATC+TGG + chr4_3:9197804-9197823 None:intergenic 25.0%
! ATCTGTGAAATTGAATTCTT+AGG + chr4_3:9198465-9198484 None:intergenic 25.0%
! ACTTATTGGGAAATTGTATT+CGG - chr4_3:9198491-9198510 Msa0628500:CDS 25.0%
!! ATAATAAGTTTTGCATGATC+TGG - chr4_3:9199686-9199705 Msa0628500:intron 25.0%
!! TATTTTATCTCATGATGTGA+AGG - chr4_3:9199720-9199739 Msa0628500:intron 25.0%
! AGTAAAAGTTGTTAATTCAC+AGG + chr4_3:9200234-9200253 None:intergenic 25.0%
!!! AACTTTTACTTGTTTTGTTC+AGG - chr4_3:9200244-9200263 Msa0628500:intron 25.0%
! TGAATACCAATAAAATAAGC+AGG + chr4_3:9200661-9200680 None:intergenic 25.0%
! TATTGGTATTCACATGAAAA+AGG - chr4_3:9200669-9200688 Msa0628500:intron 25.0%
! ATTGGTATTCACATGAAAAA+GGG - chr4_3:9200670-9200689 Msa0628500:intron 25.0%
!! CCTGTTTTCTAATTATTGAT+GGG - chr4_3:9200693-9200712 Msa0628500:intron 25.0%
! TAAGAATAGTTTCACAAGTA+TGG - chr4_3:9200786-9200805 Msa0628500:CDS 25.0%
! GAGATTTGCATTTAATCTAA+AGG + chr4_3:9200900-9200919 None:intergenic 25.0%
!! AGTTTTTGATAAGATGATAG+TGG - chr4_3:9200938-9200957 Msa0628500:CDS 25.0%
! GTTCTTGCAAAAATTGATAT+TGG + chr4_3:9200980-9200999 None:intergenic 25.0%
!!! TCAAAATATGTTGTTGATTC+AGG - chr4_3:9201009-9201028 Msa0628500:intron 25.0%
!! GTTTTCTTAACCTTTTTCTT+TGG + chr4_3:9201037-9201056 None:intergenic 25.0%
! TTGTATTTCATGTTAGACTT+CGG + chr4_3:9201239-9201258 None:intergenic 25.0%
!! AAAGTTTTACAGTTTGACAT+AGG + chr4_3:9201499-9201518 None:intergenic 25.0%
! ATGTCAATGTGATCAAATTT+GGG + chr4_3:9201769-9201788 None:intergenic 25.0%
!! TACAACCATTTTATGGAAAA+GGG + chr4_3:9201830-9201849 None:intergenic 25.0%
!! TTACAACCATTTTATGGAAA+AGG + chr4_3:9201831-9201850 None:intergenic 25.0%
!!! CTTTTTTGAGGTGATATTAA+GGG + chr4_3:9202062-9202081 None:intergenic 25.0%
!!! TCTTTTTTGAGGTGATATTA+AGG + chr4_3:9202063-9202082 None:intergenic 25.0%
! TTAATATCACCTCAAAAAAG+AGG - chr4_3:9202062-9202081 Msa0628500:CDS 25.0%
! TATAACAGGTAAAGCTTAAT+AGG + chr4_3:9202100-9202119 None:intergenic 25.0%
! CATAAATAGTCTGAATATTG+AGG + chr4_3:9202271-9202290 None:intergenic 25.0%
! ATAGTATGAATATTATTGGG+TGG + chr4_3:9202345-9202364 None:intergenic 25.0%
! CTAAATCAAGAACCAAAATT+AGG + chr4_3:9202914-9202933 None:intergenic 25.0%
!! CAATTAATATACTTGGTCTT+TGG - chr4_3:9203101-9203120 Msa0628500:intron 25.0%
! ATGCAATTGAAACACAAAAT+GGG + chr4_3:9203275-9203294 None:intergenic 25.0%
! AATGCAATTGAAACACAAAA+TGG + chr4_3:9203276-9203295 None:intergenic 25.0%
! TGTGAAGTGAGATTTGATTT+AGG - chr4_3:9198259-9198278 Msa0628500:three_prime_UTR 30.0%
TCACAGATTAAGAGACTTAT+TGG - chr4_3:9198477-9198496 Msa0628500:CDS 30.0%
CACAGATTAAGAGACTTATT+GGG - chr4_3:9198478-9198497 Msa0628500:CDS 30.0%
CGGTTAATGATTGTTGTATT+GGG - chr4_3:9198691-9198710 Msa0628500:intron 30.0%
TGCAGATCAGTAAAATAACA+CGG + chr4_3:9198720-9198739 None:intergenic 30.0%
! TCATTTTGCTGCAAAGTTTA+AGG - chr4_3:9199004-9199023 Msa0628500:intron 30.0%
!! CTCAGTTGATGATATACATA+TGG - chr4_3:9199265-9199284 Msa0628500:CDS 30.0%
TGATGATATACATATGGTTG+AGG - chr4_3:9199271-9199290 Msa0628500:CDS 30.0%
! TGTCAAGATCTTGTTTATAG+CGG + chr4_3:9199321-9199340 None:intergenic 30.0%
TTATCATGAGTGGAAGAAAT+AGG + chr4_3:9199513-9199532 None:intergenic 30.0%
ATTATTCCTAAAGGAACACA+CGG + chr4_3:9199538-9199557 None:intergenic 30.0%
TCTGATATATACCTCTGTTA+AGG - chr4_3:9199596-9199615 Msa0628500:intron 30.0%
!!! CATTTTGATTGTATGCAGAT+CGG - chr4_3:9200034-9200053 Msa0628500:CDS 30.0%
CATAAATGCACAATAGGTTA+TGG + chr4_3:9200187-9200206 None:intergenic 30.0%
TGCATCTTGCATATTAACAT+CGG + chr4_3:9200387-9200406 None:intergenic 30.0%
TGTTAATATGCAAGATGCAA+AGG - chr4_3:9200388-9200407 Msa0628500:intron 30.0%
! TCCTTTTTATATGCAACTGT+TGG - chr4_3:9200542-9200561 Msa0628500:intron 30.0%
TCCAACAGTTGCATATAAAA+AGG + chr4_3:9200546-9200565 None:intergenic 30.0%
! GCCTGTTTTCTAATTATTGA+TGG - chr4_3:9200692-9200711 Msa0628500:intron 30.0%
CCCATCAATAATTAGAAAAC+AGG + chr4_3:9200696-9200715 None:intergenic 30.0%
AGTTTAAGCAACATAAACTG+CGG + chr4_3:9200750-9200769 None:intergenic 30.0%
TAATCTAAAGGAGCAAAATG+AGG + chr4_3:9200888-9200907 None:intergenic 30.0%
GATTAAATGCAAATCTCCTT+AGG - chr4_3:9200903-9200922 Msa0628500:CDS 30.0%
AAATGTTCCTGTATTTGAGT+TGG - chr4_3:9201057-9201076 Msa0628500:intron 30.0%
TGTTTATGACATGAGAAACA+AGG - chr4_3:9201198-9201217 Msa0628500:intron 30.0%
TGTATTTCATGTTAGACTTC+GGG + chr4_3:9201238-9201257 None:intergenic 30.0%
TTTGCGCATATAAGTACAAA+GGG + chr4_3:9201561-9201580 None:intergenic 30.0%
ATTTGCGCATATAAGTACAA+AGG + chr4_3:9201562-9201581 None:intergenic 30.0%
ACTTATATGCGCAAATATTG+TGG - chr4_3:9201566-9201585 Msa0628500:intron 30.0%
GCATAAACAATGCTCAATTA+AGG + chr4_3:9201627-9201646 None:intergenic 30.0%
GATCAGTTCAACTATTGTAT+AGG - chr4_3:9201712-9201731 Msa0628500:intron 30.0%
GATGTCAATGTGATCAAATT+TGG + chr4_3:9201770-9201789 None:intergenic 30.0%
! TTTTCCCCTTTTCCATAAAA+TGG - chr4_3:9201822-9201841 Msa0628500:CDS 30.0%
! ACAACCATTTTATGGAAAAG+GGG + chr4_3:9201829-9201848 None:intergenic 30.0%
!!! ATTTATTTTAACGTGTCCGT+AGG - chr4_3:9201866-9201885 Msa0628500:CDS 30.0%
TGAAATAAGAAAGAAAGCTG+AGG - chr4_3:9201986-9202005 Msa0628500:CDS 30.0%
TCTTTCTGTGTGATATTCAT+GGG - chr4_3:9202034-9202053 Msa0628500:CDS 30.0%
ACATGTTAAACTACTATAGC+AGG - chr4_3:9202193-9202212 Msa0628500:CDS 30.0%
TAATATGCACCTCAAAAAAG+AGG + chr4_3:9202244-9202263 None:intergenic 30.0%
!!! TCTTTTTTGAGGTGCATATT+AGG - chr4_3:9202243-9202262 Msa0628500:CDS 30.0%
TCAGACTATTTATGCTTTCT+AGG - chr4_3:9202277-9202296 Msa0628500:CDS 30.0%
! TATACAGTTTTCTCGAATGA+TGG - chr4_3:9202535-9202554 Msa0628500:CDS 30.0%
AATAGTGATAAGAATACAGG+AGG + chr4_3:9202614-9202633 None:intergenic 30.0%
CAGATGAACAATTAAGAGAA+TGG + chr4_3:9202647-9202666 None:intergenic 30.0%
! ATACAAGTTCTGCCTAATTT+TGG - chr4_3:9202899-9202918 Msa0628500:CDS 30.0%
!!! AATCCGGATTTTTTACAGAA+GGG - chr4_3:9203124-9203143 Msa0628500:intron 30.0%
AAACCCTTCTGTAAAAAATC+CGG + chr4_3:9203130-9203149 None:intergenic 30.0%
! TTTCTATGGATTTTGGACTT+TGG - chr4_3:9203361-9203380 Msa0628500:five_prime_UTR 30.0%
TTATTAATCAGACAAGCCTT+TGG - chr4_3:9203397-9203416 Msa0628500:five_prime_UTR 30.0%
TATTAATCAGACAAGCCTTT+GGG - chr4_3:9203398-9203417 Msa0628500:five_prime_UTR 30.0%
ATATAGAGAATCTGGTAGAG+TGG + chr4_3:9197796-9197815 None:intergenic 35.0%
!! GAGAAAATTAGGGTTTTGTG+TGG + chr4_3:9197971-9197990 None:intergenic 35.0%
TGCGAGAAGAGAGAAAATTA+GGG + chr4_3:9197981-9198000 None:intergenic 35.0%
ATGCGAGAAGAGAGAAAATT+AGG + chr4_3:9197982-9198001 None:intergenic 35.0%
! AATTTTCTCTCTTCTCGCAT+CGG - chr4_3:9197982-9198001 Msa0628500:three_prime_UTR 35.0%
TTGATTTAGGAAGATGAGTG+TGG - chr4_3:9198272-9198291 Msa0628500:three_prime_UTR 35.0%
TGAGAAGAATCTTAATGCTG+CGG - chr4_3:9198671-9198690 Msa0628500:intron 35.0%
GCGGTTAATGATTGTTGTAT+TGG - chr4_3:9198690-9198709 Msa0628500:intron 35.0%
! ATTTTACTGATCTGCAGAGA+AGG - chr4_3:9198724-9198743 Msa0628500:intron 35.0%
! TTTTACTGATCTGCAGAGAA+GGG - chr4_3:9198725-9198744 Msa0628500:intron 35.0%
ACATTCAACTGATCATTCTC+GGG + chr4_3:9198852-9198871 None:intergenic 35.0%
CACATTCAACTGATCATTCT+CGG + chr4_3:9198853-9198872 None:intergenic 35.0%
! AATGTGGCTTTTGTGGATAT+TGG - chr4_3:9198867-9198886 Msa0628500:intron 35.0%
TTGCATTGCTGGGTTTAAAA+AGG - chr4_3:9198908-9198927 Msa0628500:intron 35.0%
TGCATTGCTGGGTTTAAAAA+GGG - chr4_3:9198909-9198928 Msa0628500:intron 35.0%
! TTTTGCTGCAAAGTTTAAGG+AGG - chr4_3:9199007-9199026 Msa0628500:intron 35.0%
TTGATGTGCTTTCTAATGCT+AGG - chr4_3:9199039-9199058 Msa0628500:intron 35.0%
TGATGTGCTTTCTAATGCTA+GGG - chr4_3:9199040-9199059 Msa0628500:intron 35.0%
ATGGATGAGAAGGATGTAAA+GGG - chr4_3:9199149-9199168 Msa0628500:intron 35.0%
! GTCAAGATCTTGTTTATAGC+GGG + chr4_3:9199320-9199339 None:intergenic 35.0%
!!! CTTGACAGAGTTTTTCAAGA+AGG - chr4_3:9199334-9199353 Msa0628500:intron 35.0%
ATTCTCGCACTTTAAACGTT+GGG + chr4_3:9199430-9199449 None:intergenic 35.0%
AATTCTCGCACTTTAAACGT+TGG + chr4_3:9199431-9199450 None:intergenic 35.0%
! GTTTAAAGTGCGAGAATTTC+AGG - chr4_3:9199433-9199452 Msa0628500:CDS 35.0%
GGTAACATTTCTTCAGCATT+TGG - chr4_3:9199454-9199473 Msa0628500:CDS 35.0%
! TTTGGTTTCGTGAGTTTACT+TGG - chr4_3:9199472-9199491 Msa0628500:CDS 35.0%
ATGAGTGGAAGAAATAGGAA+TGG + chr4_3:9199508-9199527 None:intergenic 35.0%
ATAAAACCGTGTGTTCCTTT+AGG - chr4_3:9199529-9199548 Msa0628500:CDS 35.0%
ATTCATTAAGGCCTTAACAG+AGG + chr4_3:9199610-9199629 None:intergenic 35.0%
! GCCTTAATGAATTTTCACGT+GGG - chr4_3:9199618-9199637 Msa0628500:intron 35.0%
ACCCACGTGAAAATTCATTA+AGG + chr4_3:9199622-9199641 None:intergenic 35.0%
ATATGAACAAGTCACAGCAA+AGG + chr4_3:9199668-9199687 None:intergenic 35.0%
TTGCATGATCTGGTATAATG+TGG - chr4_3:9199696-9199715 Msa0628500:intron 35.0%
ATTACCCTTCGGAAAAACAA+GGG + chr4_3:9199836-9199855 None:intergenic 35.0%
TAATCCCATACCAAGTATCA+AGG - chr4_3:9199852-9199871 Msa0628500:CDS 35.0%
ATCACTGTATTGTGCATCAA+TGG + chr4_3:9199908-9199927 None:intergenic 35.0%
CACAATACAGTGATGTGAAT+GGG - chr4_3:9199914-9199933 Msa0628500:intron 35.0%
AAGACTTGTCAAATGGCTTA+CGG + chr4_3:9199971-9199990 None:intergenic 35.0%
CGATCTGCATACAATCAAAA+TGG + chr4_3:9200036-9200055 None:intergenic 35.0%
!!! TCGCTTTGTTTTGCTTCAAA+AGG + chr4_3:9200061-9200080 None:intergenic 35.0%
TGAAGCAAAACAAAGCGAAA+AGG - chr4_3:9200063-9200082 Msa0628500:CDS 35.0%
AAAGTTCGTTTGAATGTGCA+TGG - chr4_3:9200100-9200119 Msa0628500:CDS 35.0%
AATGCACAATAGGTTATGGT+AGG + chr4_3:9200183-9200202 None:intergenic 35.0%
!!! TACTTGTTTTGTTCAGGTCT+TGG - chr4_3:9200250-9200269 Msa0628500:intron 35.0%
! AGGTTCTTTAGCTGATTCTT+TGG + chr4_3:9200303-9200322 None:intergenic 35.0%
AGCTAAAGAACCTACTAAGA+TGG - chr4_3:9200310-9200329 Msa0628500:intron 35.0%
TAAAGAACCTACTAAGATGG+AGG - chr4_3:9200313-9200332 Msa0628500:intron 35.0%
!! AATGGATGTTGATGATACCA+AGG - chr4_3:9200472-9200491 Msa0628500:intron 35.0%
!!! AACCAGCCTGCTTATTTTAT+TGG - chr4_3:9200652-9200671 Msa0628500:intron 35.0%
TACCAATAAAATAAGCAGGC+TGG + chr4_3:9200657-9200676 None:intergenic 35.0%
CCATAAACCAACTCAAATAC+AGG + chr4_3:9201067-9201086 None:intergenic 35.0%
!! CCTGTATTTGAGTTGGTTTA+TGG - chr4_3:9201064-9201083 Msa0628500:intron 35.0%
! TGTAGAGAAGGAGTATGAAA+TGG - chr4_3:9201117-9201136 Msa0628500:CDS 35.0%
TATGACATGAGAAACAAGGT+TGG - chr4_3:9201202-9201221 Msa0628500:intron 35.0%
CAGAAGCAATAACAAACTCT+TGG + chr4_3:9201331-9201350 None:intergenic 35.0%
!! AGTTTGTTATTGCTTCTGAG+AGG - chr4_3:9201333-9201352 Msa0628500:CDS 35.0%
!! GTTTGTTATTGCTTCTGAGA+GGG - chr4_3:9201334-9201353 Msa0628500:CDS 35.0%
!! CTTTTTGAGCTCTTCAAGTT+TGG + chr4_3:9201441-9201460 None:intergenic 35.0%
CAAACTTGAAGAGCTCAAAA+AGG - chr4_3:9201439-9201458 Msa0628500:CDS 35.0%
! GAGCTCAAAAAGGTAAGTTT+TGG - chr4_3:9201449-9201468 Msa0628500:CDS 35.0%
TTTACAGTTTGACATAGGAC+AGG + chr4_3:9201494-9201513 None:intergenic 35.0%
ACAAAGGGAAAAAACCAACA+GGG + chr4_3:9201546-9201565 None:intergenic 35.0%
TACAAAGGGAAAAAACCAAC+AGG + chr4_3:9201547-9201566 None:intergenic 35.0%
TTGTTTATGCAATTGCAGCA+AGG - chr4_3:9201637-9201656 Msa0628500:intron 35.0%
TCTTTGTAACGCTCTTCAAT+CGG + chr4_3:9201667-9201686 None:intergenic 35.0%
TTACAAAGAATACGAGGAGA+GGG - chr4_3:9201678-9201697 Msa0628500:intron 35.0%
GAAAAGGGGAAAAAATTGAC+AGG + chr4_3:9201815-9201834 None:intergenic 35.0%
ACACATTCATTCAAGACCTA+CGG + chr4_3:9201885-9201904 None:intergenic 35.0%
CTCTTTCTGTGTGATATTCA+TGG - chr4_3:9202033-9202052 Msa0628500:CDS 35.0%
!!! ACTCTTAGACCTCTTTTTTG+AGG + chr4_3:9202074-9202093 None:intergenic 35.0%
TCAAAAAAGAGGTCTAAGAG+TGG - chr4_3:9202073-9202092 Msa0628500:CDS 35.0%
TAAGCTTTACCTGTTATAGC+CGG - chr4_3:9202102-9202121 Msa0628500:CDS 35.0%
GTATATTAACCGGCTATAAC+AGG + chr4_3:9202114-9202133 None:intergenic 35.0%
!!! ACCATTAGTCCTCTTTTTTG+AGG - chr4_3:9202232-9202251 Msa0628500:CDS 35.0%
ACCTCAAAAAAGAGGACTAA+TGG + chr4_3:9202236-9202255 None:intergenic 35.0%
!!! TTTTGTAGCACTGACACTTT+AGG - chr4_3:9202454-9202473 Msa0628500:CDS 35.0%
! CTTATCAGTTTCCATTGGTT+CGG + chr4_3:9202872-9202891 None:intergenic 35.0%
ATCAAGTTTGTGACGAAACT+TGG - chr4_3:9202935-9202954 Msa0628500:exon 35.0%
AACAAACCAACCAACATAGA+GGG + chr4_3:9203075-9203094 None:intergenic 35.0%
TAACAAACCAACCAACATAG+AGG + chr4_3:9203076-9203095 None:intergenic 35.0%
!! TATACTTGGTCTTTGGAATC+CGG - chr4_3:9203108-9203127 Msa0628500:intron 35.0%
!!! GAATCCGGATTTTTTACAGA+AGG - chr4_3:9203123-9203142 Msa0628500:intron 35.0%
AACGAGACAGATCTGGATTA+GGG + chr4_3:9198020-9198039 None:intergenic 40.0%
AAACGAGACAGATCTGGATT+AGG + chr4_3:9198021-9198040 None:intergenic 40.0%
AGAGAAAAACGAGACAGATC+TGG + chr4_3:9198027-9198046 None:intergenic 40.0%
ATTTAGGAAGATGAGTGTGG+TGG - chr4_3:9198275-9198294 Msa0628500:three_prime_UTR 40.0%
TTTAGGAAGATGAGTGTGGT+GGG - chr4_3:9198276-9198295 Msa0628500:three_prime_UTR 40.0%
!! AGTGTGGTGGGATTTGATTT+TGG - chr4_3:9198288-9198307 Msa0628500:three_prime_UTR 40.0%
TATGTTTCGGTGAAAAGCAG+CGG - chr4_3:9198400-9198419 Msa0628500:CDS 40.0%
TGGGAAATTGTATTCGGATC+CGG - chr4_3:9198497-9198516 Msa0628500:CDS 40.0%
TTAAGATCACGCTGCAAATC+CGG + chr4_3:9198519-9198538 None:intergenic 40.0%
ATCATCGCAAACACTTGTGT+CGG + chr4_3:9198627-9198646 None:intergenic 40.0%
ACAAGTGTTTGCGATGATGT+TGG - chr4_3:9198629-9198648 Msa0628500:intron 40.0%
CAAGTGTTTGCGATGATGTT+GGG - chr4_3:9198630-9198649 Msa0628500:intron 40.0%
AAGTGTTTGCGATGATGTTG+GGG - chr4_3:9198631-9198650 Msa0628500:intron 40.0%
GGCGTATGGGATTTATAAGA+CGG - chr4_3:9198821-9198840 Msa0628500:intron 40.0%
CGAGAATGATCAGTTGAATG+TGG - chr4_3:9198851-9198870 Msa0628500:intron 40.0%
! TCAGTTGAATGTGGCTTTTG+TGG - chr4_3:9198860-9198879 Msa0628500:intron 40.0%
TATTGGACATGCTAGTATGC+AGG - chr4_3:9198884-9198903 Msa0628500:intron 40.0%
GCATTGCTGGGTTTAAAAAG+GGG - chr4_3:9198910-9198929 Msa0628500:intron 40.0%
TGTTGGCACATTCGTTTGAT+AGG - chr4_3:9198943-9198962 Msa0628500:intron 40.0%
CATTCGTTTGATAGGTCTCT+TGG - chr4_3:9198951-9198970 Msa0628500:intron 40.0%
ATCAAGCACTCAATGTTCAG+GGG + chr4_3:9199131-9199150 None:intergenic 40.0%
CATCAAGCACTCAATGTTCA+GGG + chr4_3:9199132-9199151 None:intergenic 40.0%
GATGGATGAGAAGGATGTAA+AGG - chr4_3:9199148-9199167 Msa0628500:intron 40.0%
ATACATATGGTTGAGGTCGT+TGG - chr4_3:9199278-9199297 Msa0628500:CDS 40.0%
!!! AGTTTTTCAAGAAGGAGCCT+AGG - chr4_3:9199342-9199361 Msa0628500:intron 40.0%
! CCAGTGAATGTGTTGCTAAA+GGG - chr4_3:9199378-9199397 Msa0628500:intron 40.0%
! CAGTGAATGTGTTGCTAAAG+GGG - chr4_3:9199379-9199398 Msa0628500:intron 40.0%
!! ACACACGGTTTTATCATGAG+TGG + chr4_3:9199523-9199542 None:intergenic 40.0%
! GGCCTTAATGAATTTTCACG+TGG - chr4_3:9199617-9199636 Msa0628500:intron 40.0%
!!! AGTTCCCTTGTTTTTCCGAA+GGG - chr4_3:9199829-9199848 Msa0628500:CDS 40.0%
GATTACCCTTCGGAAAAACA+AGG + chr4_3:9199837-9199856 None:intergenic 40.0%
AGTGCCTTGATACTTGGTAT+GGG + chr4_3:9199859-9199878 None:intergenic 40.0%
AATGTCAGTGCCTTGATACT+TGG + chr4_3:9199865-9199884 None:intergenic 40.0%
GCACAATACAGTGATGTGAA+TGG - chr4_3:9199913-9199932 Msa0628500:intron 40.0%
! TGGAATTGCATCTGTTGACT+TGG - chr4_3:9200120-9200139 Msa0628500:CDS 40.0%
! TTTTGTTCAGGTCTTGGAAG+AGG - chr4_3:9200256-9200275 Msa0628500:intron 40.0%
TCATCAACATCCATTTGTGC+AGG + chr4_3:9200467-9200486 None:intergenic 40.0%
CCTTTCAATAGCAATCACCT+TGG + chr4_3:9200492-9200511 None:intergenic 40.0%
! CCAAGGTGATTGCTATTGAA+AGG - chr4_3:9200489-9200508 Msa0628500:intron 40.0%
TGTAAGTGTTTAGCCTGTCA+TGG - chr4_3:9200576-9200595 Msa0628500:intron 40.0%
ATGTGTCTTTCTGTCTGCAT+TGG - chr4_3:9200612-9200631 Msa0628500:intron 40.0%
CACAACAAACCTCAACAACA+AGG + chr4_3:9200812-9200831 None:intergenic 40.0%
!! CTTGTTGTTGAGGTTTGTTG+TGG - chr4_3:9200810-9200829 Msa0628500:CDS 40.0%
AACAGTATCATGCAAACACG+TGG + chr4_3:9200841-9200860 None:intergenic 40.0%
AACTGATCGAGTACATCCTA+AGG + chr4_3:9200922-9200941 None:intergenic 40.0%
GATTCAGGCTCCAAAGAAAA+AGG - chr4_3:9201024-9201043 Msa0628500:intron 40.0%
!! TGAGTTGGTTTATGGAGCAA+TGG - chr4_3:9201072-9201091 Msa0628500:intron 40.0%
GGACAAGAAAAATGCAGTAG+AGG - chr4_3:9201171-9201190 Msa0628500:intron 40.0%
! GAAGATTGGCTATATGAGGA+TGG - chr4_3:9201386-9201405 Msa0628500:CDS 40.0%
GATGGTGAAGACGAAACTAA+AGG - chr4_3:9201404-9201423 Msa0628500:CDS 40.0%
ATATGCGCAAATATTGTGGC+TGG - chr4_3:9201570-9201589 Msa0628500:intron 40.0%
TGCTCAATTAAGGTTGTCAG+TGG + chr4_3:9201617-9201636 None:intergenic 40.0%
CTTTGTAACGCTCTTCAATC+GGG + chr4_3:9201666-9201685 None:intergenic 40.0%
! AGAGCGTTACAAAGAATACG+AGG - chr4_3:9201672-9201691 Msa0628500:intron 40.0%
GTTACAAAGAATACGAGGAG+AGG - chr4_3:9201677-9201696 Msa0628500:intron 40.0%
TACAAAGAATACGAGGAGAG+GGG - chr4_3:9201679-9201698 Msa0628500:intron 40.0%
TGACATCAACGAGAAACAGA+AGG - chr4_3:9201783-9201802 Msa0628500:CDS 40.0%
AATGTGTTGAAGCTGAGAAC+TGG - chr4_3:9201898-9201917 Msa0628500:CDS 40.0%
!! AGTACAGGGTTGGCATATTT+TGG + chr4_3:9201957-9201976 None:intergenic 40.0%
! TTTCAGCTACCAAGAGTACA+GGG + chr4_3:9201971-9201990 None:intergenic 40.0%
! ATTTCAGCTACCAAGAGTAC+AGG + chr4_3:9201972-9201991 None:intergenic 40.0%
AGAAAGCTGAGGCTATTGAT+AGG - chr4_3:9201997-9202016 Msa0628500:CDS 40.0%
ATTAAGCAAGGCCACAACAA+GGG + chr4_3:9202307-9202326 None:intergenic 40.0%
ATTAAGCAAGGCCACAACAA+GGG + chr4_3:9202307-9202326 None:intergenic 40.0%
TATGAACACCTCAGTTGTGT+TGG - chr4_3:9202413-9202432 Msa0628500:CDS 40.0%
ATGAACACCTCAGTTGTGTT+GGG - chr4_3:9202414-9202433 Msa0628500:CDS 40.0%
!! CTTTAGGTTGAAGGTGTGTT+AGG - chr4_3:9202470-9202489 Msa0628500:CDS 40.0%
GTTAGGTGTCCAATACATGT+CGG - chr4_3:9202487-9202506 Msa0628500:CDS 40.0%
AGCCGATTATGACAAAACCA+AGG - chr4_3:9202707-9202726 Msa0628500:CDS 40.0%
!!! GGCCTTGGTTTTGTCATAAT+CGG + chr4_3:9202712-9202731 None:intergenic 40.0%
! AGCCTGATTTTCACTATCAC+CGG + chr4_3:9202836-9202855 None:intergenic 40.0%
! TCTGGCTTATCAGTTTCCAT+TGG + chr4_3:9202877-9202896 None:intergenic 40.0%
TAGGCAGAACTTGTATTCTC+TGG + chr4_3:9202895-9202914 None:intergenic 40.0%
TGAATTGCCAGAATTTGTGC+TGG - chr4_3:9202993-9203012 Msa0628500:intron 40.0%
TCTGTTTCCAGCACAAATTC+TGG + chr4_3:9203003-9203022 None:intergenic 40.0%
AGAATTTGTGCTGGAAACAG+AGG - chr4_3:9203002-9203021 Msa0628500:intron 40.0%
TTACCACCACACATTTAGGA+AGG + chr4_3:9203179-9203198 None:intergenic 40.0%
GAGGCAAAATTACGCTCTTT+AGG - chr4_3:9203199-9203218 Msa0628500:intron 40.0%
GTTGCATGTGATTGTCATCT+AGG - chr4_3:9203336-9203355 Msa0628500:five_prime_UTR 40.0%
TTGTCATCTAGGCGTTTCTA+TGG - chr4_3:9203347-9203366 Msa0628500:five_prime_UTR 40.0%
! CTAGGCGTTTCTATGGATTT+TGG - chr4_3:9203354-9203373 Msa0628500:five_prime_UTR 40.0%
TCACAATACCAACTACCCAA+AGG + chr4_3:9203416-9203435 None:intergenic 40.0%
! TTGCTGTTGCAAGACAGAGA+GGG - chr4_3:9198328-9198347 Msa0628500:CDS 45.0%
TGAATCTAAGCGCGAAACAC+CGG - chr4_3:9198371-9198390 Msa0628500:CDS 45.0%
ACACCGGCGATTGTATGTTT+CGG - chr4_3:9198387-9198406 Msa0628500:CDS 45.0%
TCACCGAAACATACAATCGC+CGG + chr4_3:9198393-9198412 None:intergenic 45.0%
GGTGAAAAGCAGCGGTTTAT+TGG - chr4_3:9198408-9198427 Msa0628500:CDS 45.0%
! TCTGCCTTTTAGTGTGACTG+AGG - chr4_3:9198542-9198561 Msa0628500:intron 45.0%
! CTGCCTTTTAGTGTGACTGA+GGG - chr4_3:9198543-9198562 Msa0628500:intron 45.0%
! TGCCTTTTAGTGTGACTGAG+GGG - chr4_3:9198544-9198563 Msa0628500:intron 45.0%
TGAATCAACGGATACCCATC+CGG + chr4_3:9198570-9198589 None:intergenic 45.0%
AAGTAACGCGCCTGAATCAA+CGG + chr4_3:9198582-9198601 None:intergenic 45.0%
TTGATTCAGGCGCGTTACTT+GGG - chr4_3:9198582-9198601 Msa0628500:intron 45.0%
GATGATGTTGGGGAACATGA+AGG - chr4_3:9198641-9198660 Msa0628500:intron 45.0%
TTGGATGCTGCAACTATTGC+TGG - chr4_3:9198753-9198772 Msa0628500:intron 45.0%
GTCTCATGAAGCAAACGAAG+CGG + chr4_3:9198786-9198805 None:intergenic 45.0%
AGTATGCAGGTTTGCATTGC+TGG - chr4_3:9198897-9198916 Msa0628500:intron 45.0%
GTATGCAGGTTTGCATTGCT+GGG - chr4_3:9198898-9198917 Msa0628500:intron 45.0%
TCGTTTGATAGGTCTCTTGG+TGG - chr4_3:9198954-9198973 Msa0628500:intron 45.0%
! TTGATAGGTCTCTTGGTGGT+AGG - chr4_3:9198958-9198977 Msa0628500:intron 45.0%
! TGATAGGTCTCTTGGTGGTA+GGG - chr4_3:9198959-9198978 Msa0628500:intron 45.0%
!! TGGTGGTAGGGATTTTGATG+AGG - chr4_3:9198971-9198990 Msa0628500:intron 45.0%
! CTAATGCTAGGGCTTGTTTG+AGG - chr4_3:9199051-9199070 Msa0628500:intron 45.0%
! TAGGGCTTGTTTGAGGCTTA+GGG - chr4_3:9199058-9199077 Msa0628500:intron 45.0%
!! TCAATGTTCAGGGGCACTAT+AGG + chr4_3:9199122-9199141 None:intergenic 45.0%
CCATCAAGCACTCAATGTTC+AGG + chr4_3:9199133-9199152 None:intergenic 45.0%
CCTGAACATTGAGTGCTTGA+TGG - chr4_3:9199130-9199149 Msa0628500:intron 45.0%
! TGAGTGCTTGATGGATGAGA+AGG - chr4_3:9199139-9199158 Msa0628500:intron 45.0%
CATGAAGCGTGATGAGTTTG+AGG - chr4_3:9199175-9199194 Msa0628500:intron 45.0%
CCTTAACACGCTCCAAAATC+GGG + chr4_3:9199211-9199230 None:intergenic 45.0%
CCCTTAACACGCTCCAAAAT+CGG + chr4_3:9199212-9199231 None:intergenic 45.0%
!!! CCGATTTTGGAGCGTGTTAA+GGG - chr4_3:9199209-9199228 Msa0628500:CDS 45.0%
! TGTTAAGGGACCTTTGGAGA+GGG - chr4_3:9199223-9199242 Msa0628500:CDS 45.0%
! GCCAGTGAATGTGTTGCTAA+AGG - chr4_3:9199377-9199396 Msa0628500:intron 45.0%
CCCTTTAGCAACACATTCAC+TGG + chr4_3:9199381-9199400 None:intergenic 45.0%
! AAGGGAACTCTGCTGATTGT+CGG + chr4_3:9199818-9199837 None:intergenic 45.0%
!!! GAGTTCCCTTGTTTTTCCGA+AGG - chr4_3:9199828-9199847 Msa0628500:CDS 45.0%
CTTGGTATGGGATTACCCTT+CGG + chr4_3:9199847-9199866 None:intergenic 45.0%
CAGTGCCTTGATACTTGGTA+TGG + chr4_3:9199860-9199879 None:intergenic 45.0%
!! TCAAGGCACTGACATTCTAC+AGG - chr4_3:9199869-9199888 Msa0628500:CDS 45.0%
! GTATATGTGCTGATCCTAGC+AGG + chr4_3:9199949-9199968 None:intergenic 45.0%
GGCAACTGTAAGTCTTCTAG+TGG - chr4_3:9200141-9200160 Msa0628500:CDS 45.0%
TCATCAGCCTCCATCTTAGT+AGG + chr4_3:9200323-9200342 None:intergenic 45.0%
ACATCGGCATCATTGCCATT+GGG + chr4_3:9200371-9200390 None:intergenic 45.0%
AACATCGGCATCATTGCCAT+TGG + chr4_3:9200372-9200391 None:intergenic 45.0%
TGGAGATAAGCCTGCACAAA+TGG - chr4_3:9200454-9200473 Msa0628500:intron 45.0%
! TTTAGCCTGTCATGGTGTCA+TGG - chr4_3:9200584-9200603 Msa0628500:intron 45.0%
CAAAACCATGACACCATGAC+AGG + chr4_3:9200592-9200611 None:intergenic 45.0%
!! CAAGTATGGCCTTGTTGTTG+AGG - chr4_3:9200800-9200819 Msa0628500:CDS 45.0%
TGTCCAGAAAGCTGTAGAGA+AGG - chr4_3:9201105-9201124 Msa0628500:CDS 45.0%
ACTCCTTCTCTACAGCTTTC+TGG + chr4_3:9201111-9201130 None:intergenic 45.0%
TTTGCAAGATCGAGTGATGG+AGG - chr4_3:9201141-9201160 Msa0628500:CDS 45.0%
! TCGAGTGATGGAGGAAACAA+AGG - chr4_3:9201150-9201169 Msa0628500:CDS 45.0%
! GTTATTGCTTCTGAGAGGGA+AGG - chr4_3:9201338-9201357 Msa0628500:CDS 45.0%
ATCTTCCACCTCCTGAAGTT+TGG + chr4_3:9201372-9201391 None:intergenic 45.0%
AACTTCAGGAGGTGGAAGAT+TGG - chr4_3:9201372-9201391 Msa0628500:CDS 45.0%
! GGTGGAAGATTGGCTATATG+AGG - chr4_3:9201382-9201401 Msa0628500:CDS 45.0%
! TTGAAGCTGAGAACTGGCTT+CGG - chr4_3:9201904-9201923 Msa0628500:CDS 45.0%
ATATGCCAACCCTGTACTCT+TGG - chr4_3:9201959-9201978 Msa0628500:CDS 45.0%
TTAAGCAAGGCCACAACAAG+GGG + chr4_3:9202306-9202325 None:intergenic 45.0%
CATTAAGCAAGGCCACAACA+AGG + chr4_3:9202308-9202327 None:intergenic 45.0%
TTAAGCAAGGCCACAACAAG+GGG + chr4_3:9202306-9202325 None:intergenic 45.0%
CATTAAGCAAGGCCACAACA+AGG + chr4_3:9202308-9202327 None:intergenic 45.0%
AATCCTTCCCAACACAACTG+AGG + chr4_3:9202424-9202443 None:intergenic 45.0%
!! GCACTGACACTTTAGGTTGA+AGG - chr4_3:9202461-9202480 Msa0628500:CDS 45.0%
! ACTATCACCGGCATTTTCAC+TGG + chr4_3:9202824-9202843 None:intergenic 45.0%
! TGCCGGTGATAGTGAAAATC+AGG - chr4_3:9202831-9202850 Msa0628500:CDS 45.0%
!! ATCAGTTTCCATTGGTTCGG+TGG + chr4_3:9202869-9202888 None:intergenic 45.0%
GGCTGCTGATATGTTTGATG+TGG - chr4_3:9203047-9203066 Msa0628500:intron 45.0%
GTTCTGCCTTCCTAAATGTG+TGG - chr4_3:9203170-9203189 Msa0628500:intron 45.0%
CCTCTTACCACCACACATTT+AGG + chr4_3:9203183-9203202 None:intergenic 45.0%
CCTAAATGTGTGGTGGTAAG+AGG - chr4_3:9203180-9203199 Msa0628500:intron 45.0%
! TCTCTTCTCGCATCGGTAAC+AGG - chr4_3:9197989-9198008 Msa0628500:three_prime_UTR 50.0%
! GTTGCTGTTGCAAGACAGAG+AGG - chr4_3:9198327-9198346 Msa0628500:CDS 50.0%
CAGCGGTTTATTGGTACTGC+TGG - chr4_3:9198417-9198436 Msa0628500:CDS 50.0%
! TTTTAGTGTGACTGAGGGGC+CGG - chr4_3:9198548-9198567 Msa0628500:intron 50.0%
!! GGATGGGTATCCGTTGATTC+AGG - chr4_3:9198569-9198588 Msa0628500:intron 50.0%
! GTTGATTCAGGCGCGTTACT+TGG - chr4_3:9198581-9198600 Msa0628500:intron 50.0%
TGATTCAGGCGCGTTACTTG+GGG - chr4_3:9198583-9198602 Msa0628500:intron 50.0%
TGAGACTACTGCGACTGCAT+TGG - chr4_3:9198800-9198819 Msa0628500:intron 50.0%
! AAAGGGGCAGCTGAAAGTGT+TGG - chr4_3:9198926-9198945 Msa0628500:intron 50.0%
! CTAGGGCTTGTTTGAGGCTT+AGG - chr4_3:9199057-9199076 Msa0628500:intron 50.0%
! GGAACTGAGTCTCCCGATTT+TGG - chr4_3:9199196-9199215 Msa0628500:intron 50.0%
!!! CCCGATTTTGGAGCGTGTTA+AGG - chr4_3:9199208-9199227 Msa0628500:intron 50.0%
! GTGTTAAGGGACCTTTGGAG+AGG - chr4_3:9199222-9199241 Msa0628500:CDS 50.0%
!! ATGGTTGAGGTCGTTGGTTC+AGG - chr4_3:9199284-9199303 Msa0628500:CDS 50.0%
CTGGCATTCATTGTTCGCCT+AGG + chr4_3:9199362-9199381 None:intergenic 50.0%
CACGCAAGAGAGATCGAGAA+AGG + chr4_3:9199760-9199779 None:intergenic 50.0%
CTTTCTCGATCTCTCTTGCG+TGG - chr4_3:9199758-9199777 Msa0628500:intron 50.0%
TCGATCTCTCTTGCGTGGAA+AGG - chr4_3:9199763-9199782 Msa0628500:intron 50.0%
TCTCTTGCGTGGAAAGGTTC+TGG - chr4_3:9199769-9199788 Msa0628500:CDS 50.0%
! AGGGAACTCTGCTGATTGTC+GGG + chr4_3:9199817-9199836 None:intergenic 50.0%
! GCACTGACATTCTACAGGTC+AGG - chr4_3:9199874-9199893 Msa0628500:CDS 50.0%
GATACCCCTGGGGTTGAAAA+TGG - chr4_3:9200419-9200438 Msa0628500:intron 50.0%
CAGGCTTATCTCCAGTCTCA+GGG + chr4_3:9200448-9200467 None:intergenic 50.0%
TTATGGAGCAATGGCACCTG+TGG - chr4_3:9201081-9201100 Msa0628500:CDS 50.0%
ACAGCTTTCTGGACATCCAC+AGG + chr4_3:9201100-9201119 None:intergenic 50.0%
GGCTTTGCAAGATCGAGTGA+TGG - chr4_3:9201138-9201157 Msa0628500:CDS 50.0%
AGGTCTTACCGCCAAACTTC+AGG - chr4_3:9201358-9201377 Msa0628500:CDS 50.0%
TCTTACCGCCAAACTTCAGG+AGG - chr4_3:9201361-9201380 Msa0628500:CDS 50.0%
TTCCACCTCCTGAAGTTTGG+CGG + chr4_3:9201369-9201388 None:intergenic 50.0%
AGGGATCTGAGAATCCCTGT+TGG - chr4_3:9201529-9201548 Msa0628500:intron 50.0%
! TGAAGCTGAGAACTGGCTTC+GGG - chr4_3:9201905-9201924 Msa0628500:CDS 50.0%
! AGCTACCAAGAGTACAGGGT+TGG + chr4_3:9201967-9201986 None:intergenic 50.0%
! TTCTAGGAAGCCCCTTGTTG+TGG - chr4_3:9202293-9202312 Msa0628500:CDS 50.0%
! TTCTAGGAAGCCCCTTGTTG+TGG - chr4_3:9202293-9202312 Msa0628500:CDS 50.0%
ACACCTCAGTTGTGTTGGGA+AGG - chr4_3:9202418-9202437 Msa0628500:CDS 50.0%
! TGTCGGTGTCCGACATGTAT+TGG + chr4_3:9202499-9202518 None:intergenic 50.0%
GCTCAGAACCTGAAGAAGCT+GGG + chr4_3:9202768-9202787 None:intergenic 50.0%
TGCTCAGAACCTGAAGAAGC+TGG + chr4_3:9202769-9202788 None:intergenic 50.0%
ATCAGCATCCACCGAACCAA+TGG - chr4_3:9202858-9202877 Msa0628500:CDS 50.0%
TTTGTGCTGGAAACAGAGGC+TGG - chr4_3:9203006-9203025 Msa0628500:intron 50.0%
TTGTGCTGGAAACAGAGGCT+GGG - chr4_3:9203007-9203026 Msa0628500:intron 50.0%
TGATGTGGAGCCCTCTATGT+TGG - chr4_3:9203062-9203081 Msa0628500:intron 50.0%
CTGCCTTCCTAAATGTGTGG+TGG - chr4_3:9203173-9203192 Msa0628500:intron 50.0%
CAGACAAGCCTTTGGGTAGT+TGG - chr4_3:9203405-9203424 Msa0628500:five_prime_UTR 50.0%
GGCCCCTCAGTCACACTAAA+AGG + chr4_3:9198549-9198568 None:intergenic 55.0%
GATTCAGGCGCGTTACTTGG+GGG - chr4_3:9198584-9198603 Msa0628500:intron 55.0%
TCTGCAGAGAAGGGCTGTGT+TGG - chr4_3:9198734-9198753 Msa0628500:intron 55.0%
! ACTGCGACTGCATTGGCGTA+TGG - chr4_3:9198807-9198826 Msa0628500:intron 55.0%
! CTGCGACTGCATTGGCGTAT+GGG - chr4_3:9198808-9198827 Msa0628500:intron 55.0%
GGAGCGTGTTAAGGGACCTT+TGG - chr4_3:9199217-9199236 Msa0628500:CDS 55.0%
TCAGCAAGTGCCCTCTCCAA+AGG + chr4_3:9199236-9199255 None:intergenic 55.0%
! AGGTTCTGGTCCAGATGCAC+AGG - chr4_3:9199783-9199802 Msa0628500:CDS 55.0%
GGTCCAGATGCACAGGATAG+TGG - chr4_3:9199790-9199809 Msa0628500:CDS 55.0%
GGTCCACTATCCTGTGCATC+TGG + chr4_3:9199796-9199815 None:intergenic 55.0%
ATGGGCAGCAAACACCTGCT+AGG - chr4_3:9199932-9199951 Msa0628500:intron 55.0%
TCGGCATCATTGCCATTGGG+AGG + chr4_3:9200368-9200387 None:intergenic 55.0%
AAGGCCAATGCTGATACCCC+TGG - chr4_3:9200407-9200426 Msa0628500:intron 55.0%
AGGCCAATGCTGATACCCCT+GGG - chr4_3:9200408-9200427 Msa0628500:intron 55.0%
!! AACCCCAGGGGTATCAGCAT+TGG + chr4_3:9200414-9200433 None:intergenic 55.0%
!! GACGCCATTTTCAACCCCAG+GGG + chr4_3:9200426-9200445 None:intergenic 55.0%
!! GGACGCCATTTTCAACCCCA+GGG + chr4_3:9200427-9200446 None:intergenic 55.0%
GAAAATGGCGTCCCTGAGAC+TGG - chr4_3:9200434-9200453 Msa0628500:intron 55.0%
GCAGGCTTATCTCCAGTCTC+AGG + chr4_3:9200449-9200468 None:intergenic 55.0%
TACCGCCAAACTTCAGGAGG+TGG - chr4_3:9201364-9201383 Msa0628500:CDS 55.0%
TGTTTGTGGAGCAGCTGGCT+TGG + chr4_3:9202737-9202756 None:intergenic 55.0%
GAACCTGAAGAAGCTGGGCT+TGG + chr4_3:9202763-9202782 None:intergenic 55.0%
TGTGCTGGAAACAGAGGCTG+GGG - chr4_3:9203008-9203027 Msa0628500:intron 55.0%
GTGGAGCCCTCTATGTTGGT+TGG - chr4_3:9203066-9203085 Msa0628500:intron 55.0%
!! GAGAGGGCACTTGCTGAAGC+AGG - chr4_3:9199239-9199258 Msa0628500:CDS 60.0%
GATGCTGCTGCACCTCCCAA+TGG - chr4_3:9200353-9200372 Msa0628500:intron 60.0%
GGCCAATGCTGATACCCCTG+GGG - chr4_3:9200409-9200428 Msa0628500:intron 60.0%
!! GGGACGCCATTTTCAACCCC+AGG + chr4_3:9200428-9200447 None:intergenic 60.0%
TCGGGAGAAGAAGCAGCAGC+AGG - chr4_3:9201923-9201942 Msa0628500:CDS 60.0%
GGTGGTGTTTGTGGAGCAGC+TGG + chr4_3:9202742-9202761 None:intergenic 60.0%
!! GCTGGGCTTGGTGGTGTTTG+TGG + chr4_3:9202751-9202770 None:intergenic 60.0%
CCTGAAGAAGCTGGGCTTGG+TGG + chr4_3:9202760-9202779 None:intergenic 60.0%
CCACCAAGCCCAGCTTCTTC+AGG - chr4_3:9202757-9202776 Msa0628500:CDS 60.0%
CTGGCATTCGCATCTGCCTG+AGG + chr4_3:9202799-9202818 None:intergenic 60.0%
GCCAGCGCCAGTGAAAATGC+CGG - chr4_3:9202814-9202833 Msa0628500:CDS 60.0%
! ACCGGCATTTTCACTGGCGC+TGG + chr4_3:9202818-9202837 None:intergenic 60.0%
CTGGAAACAGAGGCTGGGGT+GGG - chr4_3:9203012-9203031 Msa0628500:intron 60.0%
AGTGTGACTGAGGGGCCGGA+TGG - chr4_3:9198552-9198571 Msa0628500:intron 65.0%
GTGTGACTGAGGGGCCGGAT+GGG - chr4_3:9198553-9198572 Msa0628500:intron 65.0%
TCAGGCGCGTTACTTGGGGG+AGG - chr4_3:9198587-9198606 Msa0628500:intron 65.0%
! GGAGGTGCAGCAGCATCAGC+AGG + chr4_3:9200350-9200369 None:intergenic 65.0%
!! TGTGGAGCAGCTGGCTTGGC+TGG + chr4_3:9202733-9202752 None:intergenic 65.0%
GCTGGAAACAGAGGCTGGGG+TGG - chr4_3:9203011-9203030 Msa0628500:intron 65.0%
GAAACAGAGGCTGGGGTGGG+TGG - chr4_3:9203015-9203034 Msa0628500:intron 65.0%
TGGGGTGGGTGGACAGTGAG+TGG - chr4_3:9203026-9203045 Msa0628500:intron 65.0%
!! GCAGCTGGCTTGGCTGGCCT+TGG + chr4_3:9202727-9202746 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 9197790 9203437 9197790 ID=Msa0628500;Name=Msa0628500
chr4_3 mRNA 9197790 9203437 9197790 ID=Msa0628500-mRNA-1;Parent=Msa0628500;Name=Msa0628500-mRNA-1;_AED=0.03;_eAED=0.03;_QI=260|1|1|1|0.88|0.8|10|522|851
chr4_3 exon 9197790 9198528 9197790 ID=Msa0628500-mRNA-1:exon:2786;Parent=Msa0628500-mRNA-1
chr4_3 exon 9199209 9199339 9199209 ID=Msa0628500-mRNA-1:exon:2785;Parent=Msa0628500-mRNA-1
chr4_3 exon 9199423 9199572 9199423 ID=Msa0628500-mRNA-1:exon:2784;Parent=Msa0628500-mRNA-1
chr4_3 exon 9199767 9199913 9199767 ID=Msa0628500-mRNA-1:exon:2783;Parent=Msa0628500-mRNA-1
chr4_3 exon 9200008 9200196 9200008 ID=Msa0628500-mRNA-1:exon:2782;Parent=Msa0628500-mRNA-1
chr4_3 exon 9200734 9200961 9200734 ID=Msa0628500-mRNA-1:exon:2781;Parent=Msa0628500-mRNA-1
chr4_3 exon 9201080 9201175 9201080 ID=Msa0628500-mRNA-1:exon:2780;Parent=Msa0628500-mRNA-1
chr4_3 exon 9201258 9201485 9201258 ID=Msa0628500-mRNA-1:exon:2779;Parent=Msa0628500-mRNA-1
chr4_3 exon 9201773 9202981 9201773 ID=Msa0628500-mRNA-1:exon:2778;Parent=Msa0628500-mRNA-1
chr4_3 exon 9203217 9203437 9203217 ID=Msa0628500-mRNA-1:exon:2777;Parent=Msa0628500-mRNA-1
chr4_3 five_prime_UTR 9203217 9203437 9203217 ID=Msa0628500-mRNA-1:five_prime_utr;Parent=Msa0628500-mRNA-1
chr4_3 five_prime_UTR 9202943 9202981 9202943 ID=Msa0628500-mRNA-1:five_prime_utr;Parent=Msa0628500-mRNA-1
chr4_3 CDS 9201773 9202942 9201773 ID=Msa0628500-mRNA-1:cds;Parent=Msa0628500-mRNA-1
chr4_3 CDS 9201258 9201485 9201258 ID=Msa0628500-mRNA-1:cds;Parent=Msa0628500-mRNA-1
chr4_3 CDS 9201080 9201175 9201080 ID=Msa0628500-mRNA-1:cds;Parent=Msa0628500-mRNA-1
chr4_3 CDS 9200734 9200961 9200734 ID=Msa0628500-mRNA-1:cds;Parent=Msa0628500-mRNA-1
chr4_3 CDS 9200008 9200196 9200008 ID=Msa0628500-mRNA-1:cds;Parent=Msa0628500-mRNA-1
chr4_3 CDS 9199767 9199913 9199767 ID=Msa0628500-mRNA-1:cds;Parent=Msa0628500-mRNA-1
chr4_3 CDS 9199423 9199572 9199423 ID=Msa0628500-mRNA-1:cds;Parent=Msa0628500-mRNA-1
chr4_3 CDS 9199209 9199339 9199209 ID=Msa0628500-mRNA-1:cds;Parent=Msa0628500-mRNA-1
chr4_3 CDS 9198312 9198528 9198312 ID=Msa0628500-mRNA-1:cds;Parent=Msa0628500-mRNA-1
chr4_3 three_prime_UTR 9197790 9198311 9197790 ID=Msa0628500-mRNA-1:three_prime_utr;Parent=Msa0628500-mRNA-1
Gene Sequence

>Msa0628500

ATGAGTGTGGTGGGATTTGATTTTGGTAACGAGAGTTGCATTGTTGCTGTTGCAAGACAGAGAGGGATTGATGTTGTGTTAAACGATGAATCTAAGCGCGAAACACCGGCGATTGTATGTTTCGGTGAAAAGCAGCGGTTTATTGGTACTGCTGGTGCTGCTTCAACTATGATGAATCCTAAGAATTCAATTTCACAGATTAAGAGACTTATTGGGAAATTGTATTCGGATCCGGATTTGCAGCGTGATCTTAAGTCTCTGCCTTTTAGTGTGACTGAGGGGCCGGATGGGTATCCGTTGATTCAGGCGCGTTACTTGGGGGAGGTTAAGCTGTTTACGCCGACACAAGTGTTTGCGATGATGTTGGGGAACATGAAGGAGATAGCTGAGAAGAATCTTAATGCTGCGGTTAATGATTGTTGTATTGGGATTCCGTGTTATTTTACTGATCTGCAGAGAAGGGCTGTGTTGGATGCTGCAACTATTGCTGGTTTGCATCCGCTTCGTTTGCTTCATGAGACTACTGCGACTGCATTGGCGTATGGGATTTATAAGACGGATCTGCCCGAGAATGATCAGTTGAATGTGGCTTTTGTGGATATTGGACATGCTAGTATGCAGGTTTGCATTGCTGGGTTTAAAAAGGGGCAGCTGAAAGTGTTGGCACATTCGTTTGATAGGTCTCTTGGTGGTAGGGATTTTGATGAGGTTTTGTTTCATCATTTTGCTGCAAAGTTTAAGGAGGAGTACAAAATTGATGTGCTTTCTAATGCTAGGGCTTGTTTGAGGCTTAGGGCATCTTGTGAGAAGATGAAGAAGATGCTCAGTGCAAATCCTATAGTGCCCCTGAACATTGAGTGCTTGATGGATGAGAAGGATGTAAAGGGTATCATGAAGCGTGATGAGTTTGAGGAACTGAGTCTCCCGATTTTGGAGCGTGTTAAGGGACCTTTGGAGAGGGCACTTGCTGAAGCAGGACTCTCAGTTGATGATATACATATGGTTGAGGTCGTTGGTTCAGGCTCTCGTGTACCCGCTATAAACAAGATCTTGACAGAGTTTTTCAAGAAGGAGCCTAGGCGAACAATGAATGCCAGTGAATGTGTTGCTAAAGGGGCTGCATTGCAATGTGCTATTCTTAGCCCAACGTTTAAAGTGCGAGAATTTCAGGTCAATGAAAGCTTTCCTTTCTCGATCTCTCTTGCGTGGAAAGGTTCTGGTCCAGATGCACAGGATAGTGGACCCGACAATCAGCAGAGTTCCCTTGTTTTTCCGAAGGGTAATCCCATACCAAGTATCAAGGCACTGACATTCTACAGGTCAGGAACATTTTCCATTGATGCACAATACAGTGATGTGAATGGGCAGCAAACACCTGCTAGGATCAGCACATATACCATCGGTCCTTTTGAAGCAAAACAAAGCGAAAAGGCAAAAGTTAAAGTGAAAGTTCGTTTGAATGTGCATGGAATTGCATCTGTTGACTTGGCAACTGTCTTGGAAGAGGAAGAAGTTGACGCTTCAGTTTCCAAAGAATCAGCTAAAGAACCTACTAAGATGGAGGCTGATGAAGCTCCTGCTGATGCTGCTGCACCTCCCAATGGCAATGATGCCGATGTTAATATGCAAGATGCAAAGGCCAATGCTGATACCCCTGGGGTTGAAAATGGCGTCCCTGAGACTGGAGATAAGCCTGCACAAATGGATGTTGATGATACCAAGGCTCCAAAGAAAAAGGTTAAGAAAACAAATGTTCCTGTATTTGAGTTGGTTTATGGAGCAATGGCACCTGTGGATGTCCAGAAAGCTGTAGAGAAGGAGTATGAAATGGCTTTGCAAGATCGAGTGATGGAGGAAACAAAGGACAAGAAAAATGCAGTAGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTTATTGCTTCTGAGAGGGAAGGTCTTACCGCCAAACTTCAGGAGGTGGAAGATTGGCTATATGAGGATGGTGAAGACGAAACTAAAGGTGTATATGTTGCCAAACTTGAAGAGCTCAAAAAGCAAGGCGACCCGATTGAAGAGCGTTACAAAGAATACGAGGAGAGGGGTACAATAATTGATCAGTTCAACTATTGTATAGGCAGTTACAGAGAAGCTGCAATGTCAACTGATCCCAAATTTGATCACATTGACATCAACGAGAAACAGAAGGTCTTGAATGAATGTGTTGAAGCTGAGAACTGGCTTCGGGAGAAGAAGCAGCAGCAGGACTCGCTTCCAAAATATGCCAACCCTGTACTCTTGGTAGCTGAAATAAGAAAGAAAGCTGAGGCTATTGATAGGTTCTGCAAGCCGATTATGACAAAACCAAGGCCAGCCAAGCCAGCTGCTCCACAAACACCACCAAGCCCAGCTTCTTCAGGTTCTGAGCAGCAGCAACCTCAGGCAGATGCGAATGCCAGCGCCAGTGAAAATGCCGGTGATAGTGAAAATCAGGCTTCATCAGCATCCACCGAACCAATGGAAACTGATAAGCCAGAGAATACAAGTTCTGCCTAA
Protein sequence

>Msa0628500

MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGEKQRFIGTAGAASTMMNPKNSISQIKRLIGKLYSDPDLQRDLKSLPFSVTEGPDGYPLIQARYLGEVKLFTPTQVFAMMLGNMKEIAEKNLNAAVNDCCIGIPCYFTDLQRRAVLDAATIAGLHPLRLLHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFHHFAAKFKEEYKIDVLSNARACLRLRASCEKMKKMLSANPIVPLNIECLMDEKDVKGIMKRDEFEELSLPILERVKGPLERALAEAGLSVDDIHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVAKGAALQCAILSPTFKVREFQVNESFPFSISLAWKGSGPDAQDSGPDNQQSSLVFPKGNPIPSIKALTFYRSGTFSIDAQYSDVNGQQTPARISTYTIGPFEAKQSEKAKVKVKVRLNVHGIASVDLATVLEEEEVDASVSKESAKEPTKMEADEAPADAAAPPNGNDADVNMQDAKANADTPGVENGVPETGDKPAQMDVDDTKAPKKKVKKTNVPVFELVYGAMAPVDVQKAVEKEYEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVIASEREGLTAKLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEYEERGTIIDQFNYCIGSYREAAMSTDPKFDHIDINEKQKVLNECVEAENWLREKKQQQDSLPKYANPVLLVAEIRKKAEAIDRFCKPIMTKPRPAKPAAPQTPPSPASSGSEQQQPQADANASASENAGDSENQASSASTEPMETDKPENTSSA*