AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1426350


Find 473 sgRNAs with CRISPR-Local

Find 891 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
tig0025986 gene 32686 43409 32686 ID=Msa1426350;Name=Msa1426350
tig0025986 mRNA 32686 43409 32686 ID=Msa1426350-mRNA-1;Parent=Msa1426350;Name=Msa1426350-mRNA-1;_AED=0.05;_eAED=0.05;_QI=176|0.84|0.9|0.9|0.94|0.9|20|321|1683
tig0025986 exon 32686 32892 32686 ID=Msa1426350-mRNA-1:exon:4853;Parent=Msa1426350-mRNA-1
tig0025986 exon 32993 33103 32993 ID=Msa1426350-mRNA-1:exon:4854;Parent=Msa1426350-mRNA-1
tig0025986 exon 33205 33289 33205 ID=Msa1426350-mRNA-1:exon:4855;Parent=Msa1426350-mRNA-1
tig0025986 exon 33427 33473 33427 ID=Msa1426350-mRNA-1:exon:4856;Parent=Msa1426350-mRNA-1
tig0025986 exon 34800 34926 34800 ID=Msa1426350-mRNA-1:exon:4857;Parent=Msa1426350-mRNA-1
tig0025986 exon 35374 35446 35374 ID=Msa1426350-mRNA-1:exon:4858;Parent=Msa1426350-mRNA-1
tig0025986 exon 35556 35706 35556 ID=Msa1426350-mRNA-1:exon:4859;Parent=Msa1426350-mRNA-1
tig0025986 exon 36218 36353 36218 ID=Msa1426350-mRNA-1:exon:4860;Parent=Msa1426350-mRNA-1
tig0025986 exon 36436 36676 36436 ID=Msa1426350-mRNA-1:exon:4861;Parent=Msa1426350-mRNA-1
tig0025986 exon 36766 36972 36766 ID=Msa1426350-mRNA-1:exon:4862;Parent=Msa1426350-mRNA-1
tig0025986 exon 37056 37181 37056 ID=Msa1426350-mRNA-1:exon:4863;Parent=Msa1426350-mRNA-1
tig0025986 exon 37276 37662 37276 ID=Msa1426350-mRNA-1:exon:4864;Parent=Msa1426350-mRNA-1
tig0025986 exon 37739 37843 37739 ID=Msa1426350-mRNA-1:exon:4865;Parent=Msa1426350-mRNA-1
tig0025986 exon 37917 38696 37917 ID=Msa1426350-mRNA-1:exon:4866;Parent=Msa1426350-mRNA-1
tig0025986 exon 39162 39306 39162 ID=Msa1426350-mRNA-1:exon:4867;Parent=Msa1426350-mRNA-1
tig0025986 exon 39383 40557 39383 ID=Msa1426350-mRNA-1:exon:4868;Parent=Msa1426350-mRNA-1
tig0025986 exon 41614 41823 41614 ID=Msa1426350-mRNA-1:exon:4869;Parent=Msa1426350-mRNA-1
tig0025986 exon 41900 42392 41900 ID=Msa1426350-mRNA-1:exon:4870;Parent=Msa1426350-mRNA-1
tig0025986 exon 42642 43137 42642 ID=Msa1426350-mRNA-1:exon:4871;Parent=Msa1426350-mRNA-1
tig0025986 exon 43163 43409 43163 ID=Msa1426350-mRNA-1:exon:4872;Parent=Msa1426350-mRNA-1
tig0025986 five_prime_UTR 32686 32861 32686 ID=Msa1426350-mRNA-1:five_prime_utr;Parent=Msa1426350-mRNA-1
tig0025986 CDS 32862 32892 32862 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 32993 33103 32993 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 33205 33289 33205 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 33427 33473 33427 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 34800 34926 34800 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 35374 35446 35374 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 35556 35706 35556 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 36218 36353 36218 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 36436 36676 36436 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 36766 36972 36766 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 37056 37181 37056 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 37276 37662 37276 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 37739 37843 37739 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 37917 38696 37917 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 39162 39306 39162 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 39383 40557 39383 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 41614 41823 41614 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 41900 42392 41900 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 CDS 42642 43063 42642 ID=Msa1426350-mRNA-1:cds;Parent=Msa1426350-mRNA-1
tig0025986 three_prime_UTR 43064 43137 43064 ID=Msa1426350-mRNA-1:three_prime_utr;Parent=Msa1426350-mRNA-1
tig0025986 three_prime_UTR 43163 43409 43163 ID=Msa1426350-mRNA-1:three_prime_utr;Parent=Msa1426350-mRNA-1
Gene Sequence

>Msa1426350

ATGGCGAAAGGTGTAATCTCCGATGACGAAGATGAGGTTGAATACGGTATGGATGAGAGAGAGCCGATTGATGGTGAAGAATTGGAGGAAGATGATGGTCGTGGTGTTGTTGATGATGATGATGATGAGGAGGAAGAAGAAGTGGTGGCGGTGTTTTGGGGAATTTTGAGATTATTAGGGTTTTCTTACGCTGCATTGTTTGATTTTGGTGTGAAATATGGCTTTTGTCTCAGTTTTTGGGTTCTTTTCTTACCTTTTGTTCTCGGTGGTGGCGAAGGGCAGGATGAATATGAAAAGGATGGATTTATAGTTGATGACATAGAGGAAGAAGAGGAGCAGGATGATGAAGAAAGAGCAGAGAGTGATGAAGAGCGTCGGAAGAAGAAAAAGAGGAAAAAAAAGGAGGAGTATGTCCTTGATGAGGATGATTACGAGTTGCTGGAGGACAATAATATCAATATTCACCGTCGGAAGGAAAATAAAAAGTTCAAGCGACTGAAAAAAGGTAGGGGCACTGAGGAGGGGCACTCTAGACAATCTGACGATGACGAGTTTTTTGGAAGTGGTAAAGGTGGGCGAATTGCCAATGAGAAGCAGCTTGAATACACTTTATTTGACGGTGAAGAAACCCATCTTGAAGACATTGCTGAAGAGGAGGAGCAAGGGGAAGAGGAGGAGGATGCCGACATCGGGGAAGAAGATGAAATGGCTGACTTCATTGTGGATGAAGAAGAACTTGATGAGAACGGAATCCCTCTGAGGACTAAGAAGCTGAAGGGTACAAGAAGGTTTAAGCCGGCACAATCCAATGCTTTACAAGAAGCTCAGGCATTATTTGGCGATGTCGAGGAGTTTCTCGATGCTCGTAATCGAAGTCGAGAACAGAACGATAATAGGGAGACTAGGCTTGAAGATGAATTTGAGCCTATTATTCTTTCTGAGAAATACATGACAGAGAAGGATGACATGATTAGGGAGCTCGATATTCCAGAGAGAATACAGATATCAGAGGAGAGTACTGGTGCTCCTTCAACGGATCCAATTAGTATAGATGAAGAGACTCAGTGGATAGTTAAACAACTTAAACATGGGGCCGTCCCTTGGATTCGCAAGAAAAATTCAAGTTCCCAAAATAAAGAGCAGGAGCTACCAATTGACCAGGATGATATTGTCAGATTTTTGGAACTGCACCACGAGCAAAAATTAGATATTCCTTTTATTGCCATGTATCGGAAGGAGGAGTGTTTAAGCTTATTGAAAGACCTAGAGCGACCTGAAGCCGGTGATGAGAATTGGGATAAGAGCAACAAGACACCTATTCTAAAATGGCACAAGATACTTTGGGCTCTACATGACTTGGACAGGAAGTGGTTGCTTCTTCAGAAGCGGAAGAGTGCCCTCCAGTCATACTACAACAAACGGTTTGAAGAAGAGTCTCGTCGTGTATACGATGAAACGAGACTAAACTTGAATAGGCAATTGTTTGAATCAGTTATGAGATCACTGAAGGAGGCAGAATCAGAGAGGGAGGTTGACGATGTTGACTCCAAGTTCAATGTACATTTCCCACCTGGTGAAGCTGGTGTTGATGAAGGACAGTACAAAAGGCCGAAAAGGAAGTCAATGTATAGCACTTTCAGTAAGGCGGGTCTGTGGGAGGTTGCAAGCAGGTTTGGGTGTAGTTCTGAGCAACTCGGATTATGTCTATCTCTAGTTCAGATGCAAGAGTTGGAAGATCCAAAGGAAACACCAGAAGAGGTGGCTTCTAACTTCACATGTGCTATGTACGATACCCCTGAAGAAGTACTTAAATGTGCTAGGCACATGGCAGCTGTTGAGATAAGTTGTGAGCCTAGTATAAAGAAATATGTTCGTAGCCACTTCATTGACCATGCTGTGGTGTCAACCTCTCCTACTGCTGATGGAAATATGACCATAGATTCGTTCCATCAGTTTTCTGGGGTGAAGTGGCTGCGAGAGAAGCCTTTGTCTAAATTTGAGGATGCCCAATGGTTCCTAATACAGAAGGCAGAAGAGGAAAAACTCATTCAAGTTACTATTAAGCTTCCTGAAGAGTATCTTAATAAGTTAATAGACCAATTCAATGAGCTTTATATTAGTGATAGTGTTAGCAGATCTGCTCAACTGTGGAATGAACAGAGGAAGCTGATACTGCATGATGCATTTTTTCGATTTCTTTTACCATCAATGGAAAAAGAAGCAAGAGGCGTATTAGCAAGCAAAGCAAAGCTTTGGGTACTTATGGAGTATGGGAAGGCCTTGTGGAATAAGGTTTCTGTGGGGCCTTATCAACAGAAGGAAAATGATCTCAGCTCGGATGATGAGGCTGCGCCTAGGGTTATGGCCTGCTCTTGGGGTCCTGGAAATCCACAAACAACTTTTGTTATGTTAGATTCATCAGGAGAAGTGCAAGATGTGCTATACACTGGGTCACTTACTTTAAGGTCGCAGAATGCCAATGACCAACAAAGGAAGAAGAATGACCAGGAACGTGTGCTGAAGTTTATGACAGATCACCAACCGCATGTTATTGTTTTAGGAGCAGCTAACTTGTCTTGCACTCGTTTGAAGGAAGATATATATGAGGTTATTTATAAGATGGTCGAGGAAAATCCTAGAGATGTTGGCCATGAAATGGATGGGCTCAGCATTGTGTATGGAGATGAAGCTCTGCCTCGTCTTTATGAAAATTCTCGAATTTCCTCTGAACAGCTTCCTTCGCAGCAGCTAGGTATAGTGAGGCGGGCTGTTGCTCTTGGTCGATATCTCCAGAACCCATTGGCAATGGTCACGACATTATGTGGACCTAGAAAGGAAATTTTATCATGGAAACTGAGCCCTTTGGAGAATTTTCTCAACCCGGATGATAAACTTGGGATGATTGAGCAGGTTCTGGTAGATGTGACCAATCAGGCTGGTTTAGACATTAACTTAGCAATAAGTCATGAATGGTTATTTGCTCCATTGCAATTTATTTCGGGGCTTGGTCCGCGGAAGGCTGCATCCTTGCAGAGATCTCTGGTTAGAGCTGGCTCAATTTTTACTCGGAAGGACTTTTTGACTGAGCATGCACTTGGTAAAAAGGTGTTTGTCAATGCCGTTGGTTTCTTGCGTGTCCGGCGAAGTGGATTGGCTGCTAGCAGCAGCCAATTTATTGATTTGCTGGATGATACACGAATTCATCCAGAATCATATATTCTTGCACAGGAGTTGGCCAGAGCTGTGTATGAGGAAGATGGCACGGCTGATGCAAATGATGACGATGATGCACTGGAGATGGCCATAGAACATGTCAGAGATCGACCTAGTTATTTGAAAAACCTGGATGTTGTGGAATATGCTAATGACAACAAACGTCAAGACAAAATTGAAACTTTCTACGATATAAAAAGAGAATTGATTCAAGGTTTTCAGGATTGGCGTAAGCAATATGAAGAACCAAGTCAGGATGAGGAATTCTATATGATTTCAGGTGAGACTGAAGAGACTCTTGCTGAAGGTAAAATAGTCCAAGTTACAGTTCGCAGAGTGCAAGCCCAGAAAGCAATATGCGGGCTTGAATCGGGAATGACCGGAATCCTTATGAAAGAAGATTATACAGATGACTGGCGAGATATAATTGAATTATCTGATAGGCTACATGAAGGTGATATGCTCACTTGTAAAATCAAGTCAATTCAGAAGAACAGGTATCAAGTCTTCCTTGTTTGTAAAGATAGTGAAATGAGAAGTGATCGGTTACAGAACAACCAGGATCTTGATCCCTATTACCATGAAGACCAAAGCTGCTTACCAAGTGAGCAAGACAAAACTCGGAAAGAAAAGGAGCGTGCAAAGAAGCATTTCAAGCAAAGGATGATTGTTCATCCACGCTTTCAGAATATAACTGCAGATGAAGCGATGGAGTTCTTGTCGGACAAAGATCCTGGTGAAAGTATTTTCCGTCCTAGTTCCCGTGGTCCTTCCTACCTTACTTTGACTCTTAAAATTCATGATGGAGTATATGCCCACAAGGATTTAGTTGAAGGTGGGAAGGAACACAAGGACATTACAAGCTTACTTCGAATTGGAAAGACACTAAAAATTGGAGAGGACACTTTTGAGGATTTAGATGAGGTTATGGACCGATATGTTGATCCGTTGGTGACTCACTTAAAAACAATGTTAAATTATCGCAAGTTCAGGACGGGTACAAAAACAGAAGTTGATGAATTTCTGAAGATTGAAAAGGCCGAATATCCCATGCGTATCGTTTATAGCTTTGGGATCTCTCATGAACATCCTGGTACATTTATACTGACTTATATAAGAAGTACAAATCCACACCATGAGTACATTGGTCTTTATCCTAAAGGATTCAGGTTCCGGAAAAAGATGTTTGAGGATATCGACCGGCTTGTGGCATATTTTCAAAGACACATTGATGACCCTCAAAATGATTCCGCGCCTTCCATTAGATCTGTAGCTGCAATGGTACCAATGCGAAGTCCTGCAACCGGTGGCTCATCAGCGGCTTCTGTGGGTGGTTGGGGTGGTTCAAATGGTGATGGTGGTTGGAGGGGTCACTTGAATGATAGGGATCGATCTTCTACTCCTGGTTCTAGAACAGGACGACCTAGTGGAGTGCCTCGTCCGTATGGTGGTGGAAGAGGGCGTGGTCGTGGTTCTTATAACAATAGAGGACACAACAATGAAAGGCAGGATGGTGCGTCTGGATGGGGATCTGGATGGGGATCTGCTTCTACAAAAGATAAAGATGATAGTTTAAGCAACTTTCCAGGGGCTAAGGTTCAAAATTCCCCTGGAAGGGAAGCATTTCCTGGTGGTTGGGGTGGAGGCAGTGGTTGGGGAGGTGGAGTTAGTACGGGTGACAAAAGTGGCTGGGGAGGTGGAGCTAATACAGGTGACAAAAGTGGCTGGGGTGGAGGTAATGGGTGGGGTGGTGGAGCTAGTACTGGCGCTGAACATGGAAACTCTGGCTGGGGAAGTGGATCAAAGAAAGCTGCCGACATTGGATGGTCCGGAAACTGA

Protein sequence

>Msa1426350

MAKGVISDDEDEVEYGMDEREPIDGEELEEDDGRGVVDDDDDEEEEEVVAVFWGILRLLGFSYAALFDFGVKYGFCLSFWVLFLPFVLGGGEGQDEYEKDGFIVDDIEEEEEQDDEERAESDEERRKKKKRKKKEEYVLDEDDYELLEDNNINIHRRKENKKFKRLKKGRGTEEGHSRQSDDDEFFGSGKGGRIANEKQLEYTLFDGEETHLEDIAEEEEQGEEEEDADIGEEDEMADFIVDEEELDENGIPLRTKKLKGTRRFKPAQSNALQEAQALFGDVEEFLDARNRSREQNDNRETRLEDEFEPIILSEKYMTEKDDMIRELDIPERIQISEESTGAPSTDPISIDEETQWIVKQLKHGAVPWIRKKNSSSQNKEQELPIDQDDIVRFLELHHEQKLDIPFIAMYRKEECLSLLKDLERPEAGDENWDKSNKTPILKWHKILWALHDLDRKWLLLQKRKSALQSYYNKRFEEESRRVYDETRLNLNRQLFESVMRSLKEAESEREVDDVDSKFNVHFPPGEAGVDEGQYKRPKRKSMYSTFSKAGLWEVASRFGCSSEQLGLCLSLVQMQELEDPKETPEEVASNFTCAMYDTPEEVLKCARHMAAVEISCEPSIKKYVRSHFIDHAVVSTSPTADGNMTIDSFHQFSGVKWLREKPLSKFEDAQWFLIQKAEEEKLIQVTIKLPEEYLNKLIDQFNELYISDSVSRSAQLWNEQRKLILHDAFFRFLLPSMEKEARGVLASKAKLWVLMEYGKALWNKVSVGPYQQKENDLSSDDEAAPRVMACSWGPGNPQTTFVMLDSSGEVQDVLYTGSLTLRSQNANDQQRKKNDQERVLKFMTDHQPHVIVLGAANLSCTRLKEDIYEVIYKMVEENPRDVGHEMDGLSIVYGDEALPRLYENSRISSEQLPSQQLGIVRRAVALGRYLQNPLAMVTTLCGPRKEILSWKLSPLENFLNPDDKLGMIEQVLVDVTNQAGLDINLAISHEWLFAPLQFISGLGPRKAASLQRSLVRAGSIFTRKDFLTEHALGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYILAQELARAVYEEDGTADANDDDDALEMAIEHVRDRPSYLKNLDVVEYANDNKRQDKIETFYDIKRELIQGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKIVQVTVRRVQAQKAICGLESGMTGILMKEDYTDDWRDIIELSDRLHEGDMLTCKIKSIQKNRYQVFLVCKDSEMRSDRLQNNQDLDPYYHEDQSCLPSEQDKTRKEKERAKKHFKQRMIVHPRFQNITADEAMEFLSDKDPGESIFRPSSRGPSYLTLTLKIHDGVYAHKDLVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVTHLKTMLNYRKFRTGTKTEVDEFLKIEKAEYPMRIVYSFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASVGGWGGSNGDGGWRGHLNDRDRSSTPGSRTGRPSGVPRPYGGGRGRGRGSYNNRGHNNERQDGASGWGSGWGSASTKDKDDSLSNFPGAKVQNSPGREAFPGGWGGGSGWGGGVSTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEHGNSGWGSGSKKAADIGWSGN*