Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0894390 | XP_024642082.1 | 97.077 | 479 | 14 | 0 | 10 | 488 | 1 | 479 | 0.0 | 967 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0894390 | sp|Q6AZB8|HARB1_DANRE | 27.007 | 274 | 166 | 10 | 209 | 468 | 96 | 349 | 4.85e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0894390 | A0A396HHR3 | 97.077 | 479 | 14 | 0 | 10 | 488 | 1 | 479 | 0.0 | 967 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012080 | Msa0894390 | 0.804314 | 2.292517e-49 | -8.615850e-47 |
| Msa0017510 | Msa0894390 | 0.803444 | 3.476068e-49 | -8.615850e-47 |
| Msa0119850 | Msa0894390 | 0.808929 | 2.432435e-50 | -8.615850e-47 |
| Msa0610430 | Msa0894390 | 0.815280 | 1.002301e-51 | -8.615850e-47 |
| Msa0615590 | Msa0894390 | 0.803833 | 2.886091e-49 | -8.615850e-47 |
| Msa0661190 | Msa0894390 | -0.802771 | 4.788694e-49 | -8.615850e-47 |
| Msa0743720 | Msa0894390 | 0.803329 | 3.671235e-49 | -8.615850e-47 |
| Msa0745790 | Msa0894390 | 0.807354 | 5.265284e-50 | -8.615850e-47 |
| Msa0824680 | Msa0894390 | 0.802500 | 5.447430e-49 | -8.615850e-47 |
| Msa0136070 | Msa0894390 | 0.811889 | 5.584638e-51 | -8.615850e-47 |
| Msa0157290 | Msa0894390 | 0.803601 | 3.224406e-49 | -8.615850e-47 |
| Msa0160550 | Msa0894390 | 0.824115 | 9.612391e-54 | -8.615850e-47 |
| Msa0193120 | Msa0894390 | 0.819320 | 1.235748e-52 | -8.615850e-47 |
| Msa0241640 | Msa0894390 | 0.801394 | 9.191971e-49 | -8.615850e-47 |
| Msa0279790 | Msa0894390 | 0.819268 | 1.269740e-52 | -8.615850e-47 |
| Msa0337620 | Msa0894390 | 0.807720 | 4.403157e-50 | -8.615850e-47 |
| Msa0342360 | Msa0894390 | 0.805350 | 1.392536e-49 | -8.615850e-47 |
| Msa0500360 | Msa0894390 | 0.805204 | 1.494255e-49 | -8.615850e-47 |
| Msa0850960 | Msa0894390 | 0.809341 | 1.985496e-50 | -8.615850e-47 |
| Msa0878500 | Msa0894390 | 0.819162 | 1.342168e-52 | -8.615850e-47 |
| Msa0880140 | Msa0894390 | 0.803569 | 3.274087e-49 | -8.615850e-47 |
| Msa0894390 | Msa0920870 | 0.807446 | 5.034497e-50 | -8.615850e-47 |
| Msa0894390 | Msa0938220 | 0.804555 | 2.042636e-49 | -8.615850e-47 |
| Msa0894390 | Msa0944190 | 0.827121 | 1.863319e-54 | -8.615850e-47 |
| Msa0894390 | Msa0959360 | 0.809098 | 2.238167e-50 | -8.615850e-47 |
| Msa0894390 | Msa0995270 | 0.802888 | 4.530928e-49 | -8.615850e-47 |
| Msa0894390 | Msa1051200 | 0.803451 | 3.464250e-49 | -8.615850e-47 |
| Msa0894390 | Msa1222970 | 0.802212 | 6.244394e-49 | -8.615850e-47 |
| Msa0894390 | Msa1283840 | 0.802280 | 6.045286e-49 | -8.615850e-47 |
| Msa0894390 | Msa1284260 | 0.801555 | 8.519675e-49 | -8.615850e-47 |
| Msa0894390 | Msa1322860 | 0.800379 | 1.481935e-48 | -8.615850e-47 |
| Msa0894390 | Msa1327050 | 0.803914 | 2.776554e-49 | -8.615850e-47 |
| Msa0894390 | Msa1367080 | 0.802743 | 4.854278e-49 | -8.615850e-47 |
| Msa0894390 | Msa1386780 | 0.803825 | 2.898078e-49 | -8.615850e-47 |
| Msa0894390 | Msa1411070 | 0.808430 | 3.109704e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0894390 | MtrunA17_Chr6g0477141 | 97.077 | 479 | 14 | 0 | 10 | 488 | 1 | 479 | 0.0 | 967 |
| Msa0894390 | MtrunA17_Chr6g0478531 | 46.685 | 362 | 172 | 5 | 138 | 482 | 27 | 384 | 4.29e-110 | 331 |
| Msa0894390 | MtrunA17_Chr7g0226311 | 44.444 | 306 | 163 | 4 | 146 | 448 | 6 | 307 | 6.25e-87 | 270 |
| Msa0894390 | MtrunA17_Chr1g0207391 | 45.085 | 295 | 160 | 1 | 138 | 432 | 77 | 369 | 2.34e-84 | 266 |
| Msa0894390 | MtrunA17_Chr1g0172731 | 40.798 | 326 | 188 | 3 | 110 | 432 | 27 | 350 | 1.74e-83 | 263 |
| Msa0894390 | MtrunA17_Chr1g0190171 | 40.184 | 326 | 190 | 3 | 110 | 432 | 27 | 350 | 2.08e-82 | 261 |
| Msa0894390 | MtrunA17_Chr8g0391981 | 38.182 | 385 | 220 | 6 | 110 | 484 | 38 | 414 | 4.16e-80 | 255 |
| Msa0894390 | MtrunA17_Chr1g0182341 | 38.527 | 353 | 179 | 5 | 113 | 455 | 24 | 348 | 4.13e-74 | 238 |
| Msa0894390 | MtrunA17_Chr2g0321401 | 39.056 | 233 | 135 | 3 | 110 | 336 | 26 | 257 | 2.60e-54 | 183 |
| Msa0894390 | MtrunA17_Chr8g0334561 | 36.481 | 233 | 141 | 3 | 110 | 336 | 27 | 258 | 4.03e-51 | 174 |
| Msa0894390 | MtrunA17_Chr2g0285471 | 42.105 | 190 | 103 | 3 | 153 | 336 | 1 | 189 | 3.02e-49 | 167 |
| Msa0894390 | MtrunA17_Chr7g0267201 | 41.875 | 160 | 83 | 2 | 156 | 305 | 1 | 160 | 7.31e-38 | 136 |
| Msa0894390 | MtrunA17_Chr1g0188491 | 70.930 | 86 | 20 | 2 | 10 | 92 | 1 | 84 | 1.47e-31 | 117 |
| Msa0894390 | MtrunA17_Chr4g0018411 | 47.368 | 95 | 46 | 2 | 333 | 425 | 9 | 101 | 5.68e-21 | 89.4 |
| Msa0894390 | MtrunA17_Chr1g0154421 | 35.714 | 126 | 79 | 2 | 112 | 236 | 9 | 133 | 3.97e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0894390 | AT5G41980.1 | 48.658 | 298 | 137 | 3 | 138 | 435 | 30 | 311 | 2.00e-93 | 288 |
| Msa0894390 | AT1G43722.1 | 32.372 | 312 | 195 | 7 | 96 | 396 | 13 | 319 | 5.33e-41 | 150 |
| Msa0894390 | AT5G28730.1 | 32.328 | 232 | 126 | 4 | 150 | 376 | 24 | 229 | 1.10e-31 | 124 |
| Msa0894390 | AT5G35695.1 | 45.926 | 135 | 61 | 1 | 298 | 432 | 25 | 147 | 7.27e-31 | 119 |
| Msa0894390 | AT5G28950.1 | 46.875 | 96 | 51 | 0 | 232 | 327 | 1 | 96 | 3.85e-24 | 98.6 |
| Msa0894390 | AT3G30525.1 | 33.750 | 160 | 99 | 3 | 260 | 414 | 1 | 158 | 2.81e-19 | 85.5 |
Find 110 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGCACTGTTGAGAATTTC+TGG | 0.157165 | 6_1:+80043446 | None:intergenic |
| AACAACTCCTTTGCATTTCT+TGG | 0.218146 | 6_1:+80042673 | None:intergenic |
| CTTCTGTATTTAAGTATTCT+TGG | 0.218368 | 6_1:+80042761 | None:intergenic |
| ACCCAGGAGATGTGGATTTA+TGG | 0.249166 | 6_1:-80043771 | Msa0894390:CDS |
| GACTGGTTATTCAGTAGTTT+AGG | 0.261552 | 6_1:-80042481 | Msa0894390:CDS |
| TACTATGCAAAAGCTTTAAC+TGG | 0.264898 | 6_1:-80042074 | Msa0894390:three_prime_UTR |
| CACCGACTCACGGGTGTTAA+AGG | 0.267503 | 6_1:-80043124 | Msa0894390:CDS |
| ATCATTCGGACCTTGAAATA+TGG | 0.298091 | 6_1:+80043416 | None:intergenic |
| ACCAGTCATTTCTTTCTTCC+CGG | 0.298165 | 6_1:+80042497 | None:intergenic |
| TGAACGTAATAGAGTGATTC+AGG | 0.333897 | 6_1:-80043579 | Msa0894390:CDS |
| GATGATGAGGATGGTTCTTC+AGG | 0.349700 | 6_1:-80044537 | Msa0894390:CDS |
| CTATTATTTCAGGATTGTAT+AGG | 0.362544 | 6_1:-80043300 | Msa0894390:intron |
| ACTGGTTATTCAGTAGTTTA+GGG | 0.364419 | 6_1:-80042480 | Msa0894390:CDS |
| GCAAATTCCTGCACATGTTC+CGG | 0.367277 | 6_1:-80043262 | Msa0894390:CDS |
| AATGAGAATGCATTCTGTTC+TGG | 0.375209 | 6_1:+80042391 | None:intergenic |
| AAGAGGGGCCGAAAAGCTTC+TGG | 0.377408 | 6_1:-80044444 | Msa0894390:CDS |
| CAAAGGAGTTGTTCAATCAT+AGG | 0.383328 | 6_1:-80042663 | Msa0894390:CDS |
| GAACTCGTTGCGGCTGCTGC+TGG | 0.386586 | 6_1:-80043842 | Msa0894390:CDS |
| TGAGATTGTGAAGGAGTCTT+GGG | 0.389992 | 6_1:-80042145 | Msa0894390:three_prime_UTR |
| TGCCATAAATCCACATCTCC+TGG | 0.393862 | 6_1:+80043769 | None:intergenic |
| GCGAAATCGAGATTGATCTT+TGG | 0.398795 | 6_1:+80043239 | None:intergenic |
| ATTTGTGGGAAATTCTGATC+TGG | 0.404418 | 6_1:+80043087 | None:intergenic |
| CTGCATCATGGCATCCACTA+TGG | 0.407457 | 6_1:+80044416 | None:intergenic |
| TATCACGTAACATGGCTCTT+TGG | 0.418711 | 6_1:+80043660 | None:intergenic |
| TACCAACCTTATGAGTTTAG+AGG | 0.421610 | 6_1:-80042709 | Msa0894390:CDS |
| TGAGGAGCAAGTTTCATGAT+TGG | 0.432849 | 6_1:+80042583 | None:intergenic |
| TTCTGAGAAATACTATCTTA+AGG | 0.437134 | 6_1:-80042633 | Msa0894390:CDS |
| AACGAACCTTGAGGAATTTG+TGG | 0.440004 | 6_1:+80043072 | None:intergenic |
| TCAATACATTATTAAAATGT+CGG | 0.443527 | 6_1:+80043525 | None:intergenic |
| GAAGAAATAAATTGAACATC+GGG | 0.447295 | 6_1:+80042418 | None:intergenic |
| CTCTTCCGACCTCCACTAGC+TGG | 0.450329 | 6_1:+80044462 | None:intergenic |
| GCCATGTTACGTGATACTTC+TGG | 0.460394 | 6_1:-80043653 | Msa0894390:CDS |
| TCACTCTATTACGTTCACTA+TGG | 0.463287 | 6_1:+80043585 | None:intergenic |
| TTAAGAATTTGAAACCTGAA+TGG | 0.466429 | 6_1:-80044592 | Msa0894390:exon |
| TCTGGTGATGTTGTATCCTC+AGG | 0.466979 | 6_1:+80043464 | None:intergenic |
| GGGTGATGTTGACATGGAAT+TGG | 0.467490 | 6_1:-80043873 | Msa0894390:CDS |
| GAGGAGCAAGTTTCATGATT+GGG | 0.469428 | 6_1:+80042584 | None:intergenic |
| TGAACATCGGGAAGTTCGTC+AGG | 0.474711 | 6_1:+80042430 | None:intergenic |
| TCTTTGGCCGGAACATGTGC+AGG | 0.489674 | 6_1:+80043255 | None:intergenic |
| TTGACGACTTCTTGAATAAG+TGG | 0.490865 | 6_1:-80042342 | Msa0894390:CDS |
| ATGAGATTGTGAAGGAGTCT+TGG | 0.491849 | 6_1:-80042146 | Msa0894390:three_prime_UTR |
| CAGCTAGTGGAGGTCGGAAG+AGG | 0.495691 | 6_1:-80044461 | Msa0894390:CDS |
| GAGGATGGTTCTTCAGGCTC+AGG | 0.500473 | 6_1:-80044531 | Msa0894390:CDS |
| ACGAACCTTGAGGAATTTGT+GGG | 0.504423 | 6_1:+80043073 | None:intergenic |
| TCGAATGGTGACTCAATTTG+CGG | 0.511813 | 6_1:-80042273 | Msa0894390:three_prime_UTR |
| TTTGTGGGAAATTCTGATCT+GGG | 0.513968 | 6_1:+80043088 | None:intergenic |
| AGCTAGTGGAGGTCGGAAGA+GGG | 0.518698 | 6_1:-80044460 | Msa0894390:CDS |
| TTAGCACCTCTAAACTCATA+AGG | 0.519230 | 6_1:+80042703 | None:intergenic |
| TGGTACCGAACCCCTTGAAA+AGG | 0.519547 | 6_1:+80042727 | None:intergenic |
| TCTCTAACAAAACAGCCTTC+CGG | 0.521963 | 6_1:-80043803 | Msa0894390:CDS |
| TCTCGATTTCGCAATAAGAA+AGG | 0.526197 | 6_1:-80043228 | Msa0894390:CDS |
| CACGTAACATGGCTCTTTGG+CGG | 0.527673 | 6_1:+80043663 | None:intergenic |
| ACTCCTTTGCATTTCTTGGT+AGG | 0.527692 | 6_1:+80042677 | None:intergenic |
| CCTAACATCAAATCAAATAG+TGG | 0.528081 | 6_1:+80042239 | None:intergenic |
| CAAGCTAGTGTTCCAGCTAG+TGG | 0.528157 | 6_1:-80044474 | Msa0894390:CDS |
| TACAGATACACCAATCAGCA+TGG | 0.529586 | 6_1:-80043894 | Msa0894390:intron |
| AATTCTGATCTGGGTCATCA+AGG | 0.542424 | 6_1:+80043097 | None:intergenic |
| AAGGTTCTGTCACCGACTCA+CGG | 0.543196 | 6_1:-80043134 | Msa0894390:CDS |
| AATCGAGATTGATCTTTGGC+CGG | 0.545496 | 6_1:+80043243 | None:intergenic |
| GATTGTATAGGAGTAATTGA+TGG | 0.547687 | 6_1:-80043288 | Msa0894390:CDS |
| TCAACATCACCCATGCTGAT+TGG | 0.551007 | 6_1:+80043884 | None:intergenic |
| AGGTTCTGTCACCGACTCAC+GGG | 0.562802 | 6_1:-80043133 | Msa0894390:CDS |
| TGACATGGAATTGGATGAGA+TGG | 0.562844 | 6_1:-80043864 | Msa0894390:CDS |
| GGTTTATCACCCAGGAGATG+TGG | 0.563874 | 6_1:-80043779 | Msa0894390:CDS |
| GATATGTCGTCGTCGTCGAA+TGG | 0.565223 | 6_1:-80042288 | Msa0894390:three_prime_UTR |
| CAGGAGCGGTTTCAGCACTC+AGG | 0.566031 | 6_1:-80043560 | Msa0894390:CDS |
| GCCATAAATCCACATCTCCT+GGG | 0.566505 | 6_1:+80043770 | None:intergenic |
| TGACGACTTCTTGAATAAGT+GGG | 0.569138 | 6_1:-80042341 | Msa0894390:CDS |
| AGCAGCTGCTATCTGCATCA+TGG | 0.570810 | 6_1:+80044404 | None:intergenic |
| AGCTTCTGGTGATGCCATAG+TGG | 0.573165 | 6_1:-80044430 | Msa0894390:CDS |
| CAAGAATACTTAAATACAGA+AGG | 0.573953 | 6_1:-80042760 | Msa0894390:CDS |
| CATGTATTTCAGAAGTTGTG+TGG | 0.577325 | 6_1:-80043692 | Msa0894390:CDS |
| TGAAGAAATAAATTGAACAT+CGG | 0.577543 | 6_1:+80042417 | None:intergenic |
| AAGCAAGTGCATCAATGTGT+TGG | 0.578048 | 6_1:-80044331 | Msa0894390:CDS |
| CTTCCGGTGGTTTATCACCC+AGG | 0.581774 | 6_1:-80043787 | Msa0894390:CDS |
| GTGACAGAACCTTCCCAACC+AGG | 0.582402 | 6_1:+80043144 | None:intergenic |
| AAATGCAATTATGAAGAATG+AGG | 0.583203 | 6_1:-80044367 | Msa0894390:CDS |
| ATGGCTTTCGATGATGAGGA+TGG | 0.589950 | 6_1:-80044546 | Msa0894390:CDS |
| AAGTGGGACAAGTGGTGAAG+TGG | 0.591880 | 6_1:-80042325 | Msa0894390:exon |
| CTGGTTATTCAGTAGTTTAG+GGG | 0.592004 | 6_1:-80042479 | Msa0894390:CDS |
| CACCTCTAAACTCATAAGGT+TGG | 0.594202 | 6_1:+80042707 | None:intergenic |
| TTATTGAGATGAGATTGTGA+AGG | 0.594625 | 6_1:-80042154 | Msa0894390:three_prime_UTR |
| GGAAGTTCGTCAGGATCTGA+TGG | 0.596227 | 6_1:+80042439 | None:intergenic |
| TTTATGGCAGAAGTGCTGAA+TGG | 0.597101 | 6_1:-80043755 | Msa0894390:CDS |
| CAGCATGGGTGATGTTGACA+TGG | 0.597740 | 6_1:-80043879 | Msa0894390:CDS |
| TGGTTATTCAGTAGTTTAGG+GGG | 0.599818 | 6_1:-80042478 | Msa0894390:CDS |
| TTTGCATAATTTCATCCGCC+GGG | 0.600013 | 6_1:-80042515 | Msa0894390:CDS |
| AATTTCCCACAAATTCCTCA+AGG | 0.601774 | 6_1:-80043078 | Msa0894390:intron |
| ACAGATACACCAATCAGCAT+GGG | 0.605365 | 6_1:-80043893 | Msa0894390:intron |
| TGCCTTTAACACCCGTGAGT+CGG | 0.605648 | 6_1:+80043122 | None:intergenic |
| TTAAGTATTCTTGGTCAACA+AGG | 0.607070 | 6_1:+80042770 | None:intergenic |
| TTGTCGTGAAATGTTGCGGA+TGG | 0.607611 | 6_1:-80043720 | Msa0894390:CDS |
| TCACCTACCAAGAAATGCAA+AGG | 0.607831 | 6_1:-80042680 | Msa0894390:CDS |
| GCTAGTGGAGGTCGGAAGAG+GGG | 0.617226 | 6_1:-80044459 | Msa0894390:CDS |
| ACCAGAAGTATCACGTAACA+TGG | 0.625814 | 6_1:+80043652 | None:intergenic |
| GATGATGCGAACATGTTAGA+CGG | 0.630185 | 6_1:-80044507 | Msa0894390:CDS |
| GGTGATGTTGTATCCTCAGG+AGG | 0.631551 | 6_1:+80043467 | None:intergenic |
| GCCGGGAAGAAAGAAATGAC+TGG | 0.633615 | 6_1:-80042498 | Msa0894390:CDS |
| CTAACAAAACAGCCTTCCGG+TGG | 0.639784 | 6_1:-80043800 | Msa0894390:CDS |
| TCTTGAATAAGTGGGACAAG+TGG | 0.640998 | 6_1:-80042333 | Msa0894390:CDS |
| GTGTTCCAGCTAGTGGAGGT+CGG | 0.643438 | 6_1:-80044467 | Msa0894390:CDS |
| GTTAATGGCTTTCGATGATG+AGG | 0.645112 | 6_1:-80044550 | Msa0894390:CDS |
| TCTCCTGGGTGATAAACCAC+CGG | 0.652692 | 6_1:+80043784 | None:intergenic |
| GGTTATTCAGTAGTTTAGGG+GGG | 0.667813 | 6_1:-80042477 | Msa0894390:CDS |
| GGATGAGATGGAACTCGTTG+CGG | 0.671380 | 6_1:-80043852 | Msa0894390:CDS |
| GCTAGTGTTCCAGCTAGTGG+AGG | 0.676175 | 6_1:-80044471 | Msa0894390:CDS |
| AGTCATTTCTTTCTTCCCGG+CGG | 0.677925 | 6_1:+80042500 | None:intergenic |
| GTAATAGAGTGATTCAGGAG+CGG | 0.681046 | 6_1:-80043574 | Msa0894390:CDS |
| TGAGTCTGAAAAGAATACTG+AGG | 0.711551 | 6_1:+80042565 | None:intergenic |
| AATGTGTTGGATGAGATGCA+AGG | 0.778166 | 6_1:-80044318 | Msa0894390:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAAATTGATTAACAT+GGG | + | chr6_1:80042640-80042659 | None:intergenic | 10.0% |
| !! | AAAATATAAATTGATTAACA+TGG | + | chr6_1:80042641-80042660 | None:intergenic | 10.0% |
| !! | TCAATACATTATTAAAATGT+CGG | + | chr6_1:80043149-80043168 | None:intergenic | 15.0% |
| !! | AACTATTAATTTATTTCCTT+TGG | - | chr6_1:80043855-80043874 | Msa0894390:CDS | 15.0% |
| !!! | ATTTTCTCAAACAATTCAAA+TGG | + | chr6_1:80042507-80042526 | None:intergenic | 20.0% |
| !!! | TAGATTTTATCCATATTTCA+AGG | - | chr6_1:80043245-80043264 | Msa0894390:CDS | 20.0% |
| !! | CTTAAAAGATCATACTAATA+TGG | + | chr6_1:80043297-80043316 | None:intergenic | 20.0% |
| !! | GAAAAATGAATATAAACTGA+AGG | + | chr6_1:80043508-80043527 | None:intergenic | 20.0% |
| !! | TGAAGAAATAAATTGAACAT+CGG | + | chr6_1:80044257-80044276 | None:intergenic | 20.0% |
| !!! | GTTAACATGAAATTTTGTAT+AGG | - | chr6_1:80044467-80044486 | Msa0894390:CDS | 20.0% |
| !! | TTAAGAATTTGAAACCTGAA+TGG | - | chr6_1:80042079-80042098 | Msa0894390:three_prime_UTR | 25.0% |
| ! | AAATGCAATTATGAAGAATG+AGG | - | chr6_1:80042304-80042323 | Msa0894390:three_prime_UTR | 25.0% |
| !!! | AAATCGTCCTTTTTTGTTTT+TGG | - | chr6_1:80042523-80042542 | Msa0894390:CDS | 25.0% |
| ! | TTCGTAACCAAAAACAAAAA+AGG | + | chr6_1:80042533-80042552 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTTTGGTTACGAA+TGG | - | chr6_1:80042533-80042552 | Msa0894390:CDS | 25.0% |
| !!! | AGATTTGTTTTATGCATGAT+TGG | - | chr6_1:80042697-80042716 | Msa0894390:CDS | 25.0% |
| ! | ACAATCCTGAAATAATAGTA+GGG | + | chr6_1:80043369-80043388 | None:intergenic | 25.0% |
| ! | TACAATCCTGAAATAATAGT+AGG | + | chr6_1:80043370-80043389 | None:intergenic | 25.0% |
| ! | CTATTATTTCAGGATTGTAT+AGG | - | chr6_1:80043371-80043390 | Msa0894390:intron | 25.0% |
| !!! | CAGTTTATATTCATTTTTCC+TGG | - | chr6_1:80043509-80043528 | Msa0894390:CDS | 25.0% |
| !!! | TTATATTCATTTTTCCTGGT+TGG | - | chr6_1:80043513-80043532 | Msa0894390:CDS | 25.0% |
| !!! | TATATTCATTTTTCCTGGTT+GGG | - | chr6_1:80043514-80043533 | Msa0894390:CDS | 25.0% |
| ! | CTTCTGTATTTAAGTATTCT+TGG | + | chr6_1:80043913-80043932 | None:intergenic | 25.0% |
| ! | CAAGAATACTTAAATACAGA+AGG | - | chr6_1:80043911-80043930 | Msa0894390:intron | 25.0% |
| !! | TTCTGAGAAATACTATCTTA+AGG | - | chr6_1:80044038-80044057 | Msa0894390:intron | 25.0% |
| ! | GAAGAAATAAATTGAACATC+GGG | + | chr6_1:80044256-80044275 | None:intergenic | 25.0% |
| !!! | AAGGGTTTACTTTTTTGCTT+TGG | - | chr6_1:80042385-80042404 | Msa0894390:CDS | 30.0% |
| TTCTCAAACAATTCAAATGG+AGG | + | chr6_1:80042504-80042523 | None:intergenic | 30.0% | |
| CAGTCTAGTTAACTATACAA+AGG | + | chr6_1:80042566-80042585 | None:intergenic | 30.0% | |
| TATAGTTAACTAGACTGCAA+AGG | - | chr6_1:80042569-80042588 | Msa0894390:CDS | 30.0% | |
| ! | CAAATCTAGTTTGAAAACAG+AGG | + | chr6_1:80042684-80042703 | None:intergenic | 30.0% |
| ! | GTTTTATGCATGATTGGAAT+TGG | - | chr6_1:80042703-80042722 | Msa0894390:CDS | 30.0% |
| !! | GCGATATTTTTAAACGTCAT+TGG | - | chr6_1:80043063-80043082 | Msa0894390:intron | 30.0% |
| GAAGTAGCTAAATGATCATT+CGG | + | chr6_1:80043272-80043291 | None:intergenic | 30.0% | |
| TGAAATAATAGTAGGGAGAT+GGG | + | chr6_1:80043362-80043381 | None:intergenic | 30.0% | |
| GATTGTATAGGAGTAATTGA+TGG | - | chr6_1:80043383-80043402 | Msa0894390:intron | 30.0% | |
| TACTACACAGATAACTAACA+AGG | + | chr6_1:80043660-80043679 | None:intergenic | 30.0% | |
| ATATGAAACACAAACTCACA+TGG | + | chr6_1:80043811-80043830 | None:intergenic | 30.0% | |
| ! | TTCCTTTGGATTTGTTTCAT+AGG | - | chr6_1:80043869-80043888 | Msa0894390:CDS | 30.0% |
| TTCCTATGAAACAAATCCAA+AGG | + | chr6_1:80043874-80043893 | None:intergenic | 30.0% | |
| TTAAGTATTCTTGGTCAACA+AGG | + | chr6_1:80043904-80043923 | None:intergenic | 30.0% | |
| ACTGGTTATTCAGTAGTTTA+GGG | - | chr6_1:80044191-80044210 | Msa0894390:intron | 30.0% | |
| CCTAACATCAAATCAAATAG+TGG | + | chr6_1:80044435-80044454 | None:intergenic | 30.0% | |
| !! | CCACTATTTGATTTGATGTT+AGG | - | chr6_1:80044432-80044451 | Msa0894390:CDS | 30.0% |
| TTATTGAGATGAGATTGTGA+AGG | - | chr6_1:80044517-80044536 | Msa0894390:CDS | 30.0% | |
| ! | CTTTTGCATAGTAATGCAAT+TGG | + | chr6_1:80044590-80044609 | None:intergenic | 30.0% |
| ! | TACTATGCAAAAGCTTTAAC+TGG | - | chr6_1:80044597-80044616 | Msa0894390:five_prime_UTR | 30.0% |
| AAAAACACAGCAAACCATTC+AGG | + | chr6_1:80042096-80042115 | None:intergenic | 35.0% | |
| !! | CTGTGTTTTTGCAGTGTTAA+TGG | - | chr6_1:80042106-80042125 | Msa0894390:three_prime_UTR | 35.0% |
| TAATAGAGATGAAAACCTCC+CGG | + | chr6_1:80042436-80042455 | None:intergenic | 35.0% | |
| AGAGTGAAAAAAGAATGCCA+TGG | - | chr6_1:80042456-80042475 | Msa0894390:CDS | 35.0% | |
| ! | GTTTGAAAACAGAGGTATGT+TGG | + | chr6_1:80042676-80042695 | None:intergenic | 35.0% |
| ! | ACTTTTGTCGTGAAATGTTG+CGG | - | chr6_1:80042947-80042966 | Msa0894390:intron | 35.0% |
| CATGTATTTCAGAAGTTGTG+TGG | - | chr6_1:80042979-80042998 | Msa0894390:intron | 35.0% | |
| TCACTCTATTACGTTCACTA+TGG | + | chr6_1:80043089-80043108 | None:intergenic | 35.0% | |
| TGAACGTAATAGAGTGATTC+AGG | - | chr6_1:80043092-80043111 | Msa0894390:CDS | 35.0% | |
| ATCATTCGGACCTTGAAATA+TGG | + | chr6_1:80043258-80043277 | None:intergenic | 35.0% | |
| AGCACATAGAGTGATAAACA+GGG | + | chr6_1:80043324-80043343 | None:intergenic | 35.0% | |
| TAGCACATAGAGTGATAAAC+AGG | + | chr6_1:80043325-80043344 | None:intergenic | 35.0% | |
| CTGAAATAATAGTAGGGAGA+TGG | + | chr6_1:80043363-80043382 | None:intergenic | 35.0% | |
| CATCTCCCTACTATTATTTC+AGG | - | chr6_1:80043361-80043380 | Msa0894390:intron | 35.0% | |
| TCTCGATTTCGCAATAAGAA+AGG | - | chr6_1:80043443-80043462 | Msa0894390:CDS | 35.0% | |
| TTTGTGGGAAATTCTGATCT+GGG | + | chr6_1:80043586-80043605 | None:intergenic | 35.0% | |
| ATTTGTGGGAAATTCTGATC+TGG | + | chr6_1:80043587-80043606 | None:intergenic | 35.0% | |
| AATTTCCCACAAATTCCTCA+AGG | - | chr6_1:80043593-80043612 | Msa0894390:CDS | 35.0% | |
| ! | GATTTCTTGCTCCTTTTCAA+GGG | - | chr6_1:80043933-80043952 | Msa0894390:intron | 35.0% |
| !! | ATTTCTTGCTCCTTTTCAAG+GGG | - | chr6_1:80043934-80043953 | Msa0894390:intron | 35.0% |
| TACCAACCTTATGAGTTTAG+AGG | - | chr6_1:80043962-80043981 | Msa0894390:intron | 35.0% | |
| TTAGCACCTCTAAACTCATA+AGG | + | chr6_1:80043971-80043990 | None:intergenic | 35.0% | |
| AACAACTCCTTTGCATTTCT+TGG | + | chr6_1:80044001-80044020 | None:intergenic | 35.0% | |
| CAAAGGAGTTGTTCAATCAT+AGG | - | chr6_1:80044008-80044027 | Msa0894390:intron | 35.0% | |
| TGAGTCTGAAAAGAATACTG+AGG | + | chr6_1:80044109-80044128 | None:intergenic | 35.0% | |
| ! | AGTATTCTTTTCAGACTCAG+CGG | - | chr6_1:80044110-80044129 | Msa0894390:intron | 35.0% |
| ! | TTTTGCATAATTTCATCCGC+CGG | - | chr6_1:80044155-80044174 | Msa0894390:intron | 35.0% |
| ! | GACTGGTTATTCAGTAGTTT+AGG | - | chr6_1:80044190-80044209 | Msa0894390:intron | 35.0% |
| CTGGTTATTCAGTAGTTTAG+GGG | - | chr6_1:80044192-80044211 | Msa0894390:intron | 35.0% | |
| TGGTTATTCAGTAGTTTAGG+GGG | - | chr6_1:80044193-80044212 | Msa0894390:intron | 35.0% | |
| AATGAGAATGCATTCTGTTC+TGG | + | chr6_1:80044283-80044302 | None:intergenic | 35.0% | |
| TTGACGACTTCTTGAATAAG+TGG | - | chr6_1:80044329-80044348 | Msa0894390:CDS | 35.0% | |
| TGACGACTTCTTGAATAAGT+GGG | - | chr6_1:80044330-80044349 | Msa0894390:CDS | 35.0% | |
| GTTAATGGCTTTCGATGATG+AGG | - | chr6_1:80042121-80042140 | Msa0894390:three_prime_UTR | 40.0% | |
| GATGATGCGAACATGTTAGA+CGG | - | chr6_1:80042164-80042183 | Msa0894390:three_prime_UTR | 40.0% | |
| TAGCAGCTGCTTCAAAAATG+AGG | - | chr6_1:80042279-80042298 | Msa0894390:three_prime_UTR | 40.0% | |
| AGCAGCTGCTTCAAAAATGA+GGG | - | chr6_1:80042280-80042299 | Msa0894390:three_prime_UTR | 40.0% | |
| AAGCAAGTGCATCAATGTGT+TGG | - | chr6_1:80042340-80042359 | Msa0894390:CDS | 40.0% | |
| AATGTGTTGGATGAGATGCA+AGG | - | chr6_1:80042353-80042372 | Msa0894390:CDS | 40.0% | |
| AGATGCAAGGTCTTGATGAA+AGG | - | chr6_1:80042366-80042385 | Msa0894390:CDS | 40.0% | |
| GATGCAAGGTCTTGATGAAA+GGG | - | chr6_1:80042367-80042386 | Msa0894390:CDS | 40.0% | |
| AATAGAGATGAAAACCTCCC+GGG | + | chr6_1:80042435-80042454 | None:intergenic | 40.0% | |
| AAAAAGAATGCCATGGTTGC+AGG | - | chr6_1:80042463-80042482 | Msa0894390:CDS | 40.0% | |
| AAAAGAATGCCATGGTTGCA+GGG | - | chr6_1:80042464-80042483 | Msa0894390:CDS | 40.0% | |
| ! | CAAAATTTTCCCTGCAACCA+TGG | + | chr6_1:80042476-80042495 | None:intergenic | 40.0% |
| TACAGATACACCAATCAGCA+TGG | - | chr6_1:80042777-80042796 | Msa0894390:CDS | 40.0% | |
| ACAGATACACCAATCAGCAT+GGG | - | chr6_1:80042778-80042797 | Msa0894390:CDS | 40.0% | |
| TGACATGGAATTGGATGAGA+TGG | - | chr6_1:80042807-80042826 | Msa0894390:intron | 40.0% | |
| TCTCTAACAAAACAGCCTTC+CGG | - | chr6_1:80042868-80042887 | Msa0894390:intron | 40.0% | |
| !! | TTTATGGCAGAAGTGCTGAA+TGG | - | chr6_1:80042916-80042935 | Msa0894390:intron | 40.0% |
| TATCACGTAACATGGCTCTT+TGG | + | chr6_1:80043014-80043033 | None:intergenic | 40.0% | |
| !! | ACCAGAAGTATCACGTAACA+TGG | + | chr6_1:80043022-80043041 | None:intergenic | 40.0% |
| GTAATAGAGTGATTCAGGAG+CGG | - | chr6_1:80043097-80043116 | Msa0894390:CDS | 40.0% | |
| ! | TGAATTTTTGCAACCTCCTG+AGG | - | chr6_1:80043191-80043210 | Msa0894390:CDS | 40.0% |
| CTAGCACTGTTGAGAATTTC+TGG | + | chr6_1:80043228-80043247 | None:intergenic | 40.0% | |
| AATCGAGATTGATCTTTGGC+CGG | + | chr6_1:80043431-80043450 | None:intergenic | 40.0% | |
| GCGAAATCGAGATTGATCTT+TGG | + | chr6_1:80043435-80043454 | None:intergenic | 40.0% | |
| !!! | CTGCAAGCACATTTTGAGAT+AGG | + | chr6_1:80043472-80043491 | None:intergenic | 40.0% |
| !! | TTCATTTTTCCTGGTTGGGA+AGG | - | chr6_1:80043518-80043537 | Msa0894390:CDS | 40.0% |
| AATTCTGATCTGGGTCATCA+AGG | + | chr6_1:80043577-80043596 | None:intergenic | 40.0% | |
| ACGAACCTTGAGGAATTTGT+GGG | + | chr6_1:80043601-80043620 | None:intergenic | 40.0% | |
| AACGAACCTTGAGGAATTTG+TGG | + | chr6_1:80043602-80043621 | None:intergenic | 40.0% | |
| CATAATGCTAACGAACCTTG+AGG | + | chr6_1:80043611-80043630 | None:intergenic | 40.0% | |
| TCTGTGTAGTACAAACACGT+TGG | - | chr6_1:80043669-80043688 | Msa0894390:CDS | 40.0% | |
| GTACAAACACGTTGGATCAA+AGG | - | chr6_1:80043677-80043696 | Msa0894390:CDS | 40.0% | |
| ! | GGATTTCTTGCTCCTTTTCA+AGG | - | chr6_1:80043932-80043951 | Msa0894390:intron | 40.0% |
| CACCTCTAAACTCATAAGGT+TGG | + | chr6_1:80043967-80043986 | None:intergenic | 40.0% | |
| TCACCTACCAAGAAATGCAA+AGG | - | chr6_1:80043991-80044010 | Msa0894390:intron | 40.0% | |
| ACTCCTTTGCATTTCTTGGT+AGG | + | chr6_1:80043997-80044016 | None:intergenic | 40.0% | |
| GAGGAGCAAGTTTCATGATT+GGG | + | chr6_1:80044090-80044109 | None:intergenic | 40.0% | |
| TGAGGAGCAAGTTTCATGAT+TGG | + | chr6_1:80044091-80044110 | None:intergenic | 40.0% | |
| ! | GTATTCTTTTCAGACTCAGC+GGG | - | chr6_1:80044111-80044130 | Msa0894390:intron | 40.0% |
| TTTGCATAATTTCATCCGCC+GGG | - | chr6_1:80044156-80044175 | Msa0894390:intron | 40.0% | |
| ACCAGTCATTTCTTTCTTCC+CGG | + | chr6_1:80044177-80044196 | None:intergenic | 40.0% | |
| GGTTATTCAGTAGTTTAGGG+GGG | - | chr6_1:80044194-80044213 | Msa0894390:intron | 40.0% | |
| TCTTGAATAAGTGGGACAAG+TGG | - | chr6_1:80044338-80044357 | Msa0894390:CDS | 40.0% | |
| TCGAATGGTGACTCAATTTG+CGG | - | chr6_1:80044398-80044417 | Msa0894390:CDS | 40.0% | |
| ATGAGATTGTGAAGGAGTCT+TGG | - | chr6_1:80044525-80044544 | Msa0894390:CDS | 40.0% | |
| TGAGATTGTGAAGGAGTCTT+GGG | - | chr6_1:80044526-80044545 | Msa0894390:CDS | 40.0% | |
| ATGGCTTTCGATGATGAGGA+TGG | - | chr6_1:80042125-80042144 | Msa0894390:three_prime_UTR | 45.0% | |
| GATGATGAGGATGGTTCTTC+AGG | - | chr6_1:80042134-80042153 | Msa0894390:three_prime_UTR | 45.0% | |
| ! | TGGCATCACCAGAAGCTTTT+CGG | + | chr6_1:80042238-80042257 | None:intergenic | 45.0% |
| TTGAGAATCACCCTAATGCC+CGG | - | chr6_1:80042414-80042433 | Msa0894390:CDS | 45.0% | |
| TCAACATCACCCATGCTGAT+TGG | + | chr6_1:80042790-80042809 | None:intergenic | 45.0% | |
| GGGTGATGTTGACATGGAAT+TGG | - | chr6_1:80042798-80042817 | Msa0894390:intron | 45.0% | |
| ACCCAGGAGATGTGGATTTA+TGG | - | chr6_1:80042900-80042919 | Msa0894390:intron | 45.0% | |
| GCCATAAATCCACATCTCCT+GGG | + | chr6_1:80042904-80042923 | None:intergenic | 45.0% | |
| TGCCATAAATCCACATCTCC+TGG | + | chr6_1:80042905-80042924 | None:intergenic | 45.0% | |
| TTGTCGTGAAATGTTGCGGA+TGG | - | chr6_1:80042951-80042970 | Msa0894390:intron | 45.0% | |
| GCCATGTTACGTGATACTTC+TGG | - | chr6_1:80043018-80043037 | Msa0894390:intron | 45.0% | |
| ! | TCTGGTGATGTTGTATCCTC+AGG | + | chr6_1:80043210-80043229 | None:intergenic | 45.0% |
| GCAAATTCCTGCACATGTTC+CGG | - | chr6_1:80043409-80043428 | Msa0894390:intron | 45.0% | |
| !! | TTGCTCCTTTTCAAGGGGTT+CGG | - | chr6_1:80043939-80043958 | Msa0894390:intron | 45.0% |
| AGTCATTTCTTTCTTCCCGG+CGG | + | chr6_1:80044174-80044193 | None:intergenic | 45.0% | |
| CAAGCTAGTGTTCCAGCTAG+TGG | - | chr6_1:80042197-80042216 | Msa0894390:three_prime_UTR | 50.0% | |
| ! | AGCTTCTGGTGATGCCATAG+TGG | - | chr6_1:80042241-80042260 | Msa0894390:intron | 50.0% |
| CTGCATCATGGCATCCACTA+TGG | + | chr6_1:80042258-80042277 | None:intergenic | 50.0% | |
| AGCAGCTGCTATCTGCATCA+TGG | + | chr6_1:80042270-80042289 | None:intergenic | 50.0% | |
| TGAGAATCACCCTAATGCCC+GGG | - | chr6_1:80042415-80042434 | Msa0894390:CDS | 50.0% | |
| TGAAAACCTCCCGGGCATTA+GGG | + | chr6_1:80042427-80042446 | None:intergenic | 50.0% | |
| ATGAAAACCTCCCGGGCATT+AGG | + | chr6_1:80042428-80042447 | None:intergenic | 50.0% | |
| CAGCATGGGTGATGTTGACA+TGG | - | chr6_1:80042792-80042811 | Msa0894390:intron | 50.0% | |
| GGATGAGATGGAACTCGTTG+CGG | - | chr6_1:80042819-80042838 | Msa0894390:intron | 50.0% | |
| CTAACAAAACAGCCTTCCGG+TGG | - | chr6_1:80042871-80042890 | Msa0894390:intron | 50.0% | |
| TCTCCTGGGTGATAAACCAC+CGG | + | chr6_1:80042890-80042909 | None:intergenic | 50.0% | |
| GGTTTATCACCCAGGAGATG+TGG | - | chr6_1:80042892-80042911 | Msa0894390:intron | 50.0% | |
| CACGTAACATGGCTCTTTGG+CGG | + | chr6_1:80043011-80043030 | None:intergenic | 50.0% | |
| GGTGATGTTGTATCCTCAGG+AGG | + | chr6_1:80043207-80043226 | None:intergenic | 50.0% | |
| !! | AAGGTTCTGTCACCGACTCA+CGG | - | chr6_1:80043537-80043556 | Msa0894390:CDS | 50.0% |
| TGCCTTTAACACCCGTGAGT+CGG | + | chr6_1:80043552-80043571 | None:intergenic | 50.0% | |
| ! | TGGTACCGAACCCCTTGAAA+AGG | + | chr6_1:80043947-80043966 | None:intergenic | 50.0% |
| GCCGGGAAGAAAGAAATGAC+TGG | - | chr6_1:80044173-80044192 | Msa0894390:intron | 50.0% | |
| TAGTTTAGGGGGGACATTCG+TGG | - | chr6_1:80044204-80044223 | Msa0894390:intron | 50.0% | |
| GGAAGTTCGTCAGGATCTGA+TGG | + | chr6_1:80044235-80044254 | None:intergenic | 50.0% | |
| TGAACATCGGGAAGTTCGTC+AGG | + | chr6_1:80044244-80044263 | None:intergenic | 50.0% | |
| AAGTGGGACAAGTGGTGAAG+TGG | - | chr6_1:80044346-80044365 | Msa0894390:CDS | 50.0% | |
| GATATGTCGTCGTCGTCGAA+TGG | - | chr6_1:80044383-80044402 | Msa0894390:CDS | 50.0% | |
| GAGGATGGTTCTTCAGGCTC+AGG | - | chr6_1:80042140-80042159 | Msa0894390:three_prime_UTR | 55.0% | |
| GCTAGTGTTCCAGCTAGTGG+AGG | - | chr6_1:80042200-80042219 | Msa0894390:three_prime_UTR | 55.0% | |
| GTGTTCCAGCTAGTGGAGGT+CGG | - | chr6_1:80042204-80042223 | Msa0894390:intron | 55.0% | |
| AGCTAGTGGAGGTCGGAAGA+GGG | - | chr6_1:80042211-80042230 | Msa0894390:intron | 55.0% | |
| AAGAGGGGCCGAAAAGCTTC+TGG | - | chr6_1:80042227-80042246 | Msa0894390:intron | 55.0% | |
| CTGGGTGATAAACCACCGGA+AGG | + | chr6_1:80042886-80042905 | None:intergenic | 55.0% | |
| CTTCCGGTGGTTTATCACCC+AGG | - | chr6_1:80042884-80042903 | Msa0894390:intron | 55.0% | |
| TCTTTGGCCGGAACATGTGC+AGG | + | chr6_1:80043419-80043438 | None:intergenic | 55.0% | |
| GTGACAGAACCTTCCCAACC+AGG | + | chr6_1:80043530-80043549 | None:intergenic | 55.0% | |
| !! | AGGTTCTGTCACCGACTCAC+GGG | - | chr6_1:80043538-80043557 | Msa0894390:CDS | 55.0% |
| !! | CACCGACTCACGGGTGTTAA+AGG | - | chr6_1:80043547-80043566 | Msa0894390:CDS | 55.0% |
| ! | CGTTGGATCAAAGGCGTGTC+TGG | - | chr6_1:80043686-80043705 | Msa0894390:CDS | 55.0% |
| TGTCAATGTCGACCGTGTCG+GGG | + | chr6_1:80043715-80043734 | None:intergenic | 55.0% | |
| GTGTCAATGTCGACCGTGTC+GGG | + | chr6_1:80043716-80043735 | None:intergenic | 55.0% | |
| CGTGTCAATGTCGACCGTGT+CGG | + | chr6_1:80043717-80043736 | None:intergenic | 55.0% | |
| CTCTTCCGACCTCCACTAGC+TGG | + | chr6_1:80042212-80042231 | None:intergenic | 60.0% | |
| CAGCTAGTGGAGGTCGGAAG+AGG | - | chr6_1:80042210-80042229 | Msa0894390:intron | 60.0% | |
| GCTAGTGGAGGTCGGAAGAG+GGG | - | chr6_1:80042212-80042231 | Msa0894390:intron | 60.0% | |
| GAATCACCCTAATGCCCGGG+AGG | - | chr6_1:80042418-80042437 | Msa0894390:CDS | 60.0% | |
| CAGGAGCGGTTTCAGCACTC+AGG | - | chr6_1:80043111-80043130 | Msa0894390:CDS | 60.0% | |
| GAACTCGTTGCGGCTGCTGC+TGG | - | chr6_1:80042829-80042848 | Msa0894390:intron | 65.0% | |
| ! | CGTGTCTGGCTTCCCCGACA+CGG | - | chr6_1:80043700-80043719 | Msa0894390:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 80042057 | 80044636 | 80042057 | ID=Msa0894390;Name=Msa0894390 |
| chr6_1 | mRNA | 80042057 | 80044636 | 80042057 | ID=Msa0894390-mRNA-1;Parent=Msa0894390;Name=Msa0894390-mRNA-1;_AED=0.07;_eAED=0.07;_QI=41|1|1|1|0.5|0.2|5|250|488 |
| chr6_1 | exon | 80042057 | 80042221 | 80042057 | ID=Msa0894390-mRNA-1:exon:13423;Parent=Msa0894390-mRNA-1 |
| chr6_1 | exon | 80042245 | 80042802 | 80042245 | ID=Msa0894390-mRNA-1:exon:13422;Parent=Msa0894390-mRNA-1 |
| chr6_1 | exon | 80043079 | 80043310 | 80043079 | ID=Msa0894390-mRNA-1:exon:13421;Parent=Msa0894390-mRNA-1 |
| chr6_1 | exon | 80043427 | 80043911 | 80043427 | ID=Msa0894390-mRNA-1:exon:13420;Parent=Msa0894390-mRNA-1 |
| chr6_1 | exon | 80044319 | 80044636 | 80044319 | ID=Msa0894390-mRNA-1:exon:13419;Parent=Msa0894390-mRNA-1 |
| chr6_1 | five_prime_UTR | 80044596 | 80044636 | 80044596 | ID=Msa0894390-mRNA-1:five_prime_utr;Parent=Msa0894390-mRNA-1 |
| chr6_1 | CDS | 80044319 | 80044595 | 80044319 | ID=Msa0894390-mRNA-1:cds;Parent=Msa0894390-mRNA-1 |
| chr6_1 | CDS | 80043427 | 80043911 | 80043427 | ID=Msa0894390-mRNA-1:cds;Parent=Msa0894390-mRNA-1 |
| chr6_1 | CDS | 80043079 | 80043310 | 80043079 | ID=Msa0894390-mRNA-1:cds;Parent=Msa0894390-mRNA-1 |
| chr6_1 | CDS | 80042330 | 80042802 | 80042330 | ID=Msa0894390-mRNA-1:cds;Parent=Msa0894390-mRNA-1 |
| chr6_1 | three_prime_UTR | 80042245 | 80042329 | 80042245 | ID=Msa0894390-mRNA-1:three_prime_utr;Parent=Msa0894390-mRNA-1 |
| chr6_1 | three_prime_UTR | 80042057 | 80042221 | 80042057 | ID=Msa0894390-mRNA-1:three_prime_utr;Parent=Msa0894390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
