Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0878500 | XP_013451544.1 | 99.338 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 5.98e-106 | 308 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0878500 | sp|Q6ID70|P23B_ARATH | 72.185 | 151 | 41 | 1 | 1 | 151 | 1 | 150 | 1.76e-74 | 222 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0878500 | A0A072U7B7 | 99.338 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 2.86e-106 | 308 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002490 | Msa0878500 | 0.801271 | 9.739884e-49 | -8.615850e-47 |
Msa0003890 | Msa0878500 | 0.802561 | 5.292695e-49 | -8.615850e-47 |
Msa0011170 | Msa0878500 | 0.800776 | 1.229727e-48 | -8.615850e-47 |
Msa0011960 | Msa0878500 | 0.811115 | 8.228721e-51 | -8.615850e-47 |
Msa0012080 | Msa0878500 | 0.822191 | 2.702607e-53 | -8.615850e-47 |
Msa0016670 | Msa0878500 | 0.809420 | 1.908933e-50 | -8.615850e-47 |
Msa0017510 | Msa0878500 | 0.827513 | 1.501330e-54 | -8.615850e-47 |
Msa0020930 | Msa0878500 | 0.823144 | 1.622234e-53 | -8.615850e-47 |
Msa0021510 | Msa0878500 | 0.802279 | 6.048768e-49 | -8.615850e-47 |
Msa0028640 | Msa0878500 | 0.804358 | 2.244989e-49 | -8.615850e-47 |
Msa0029270 | Msa0878500 | 0.832862 | 7.419026e-56 | -8.615850e-47 |
Msa0032090 | Msa0878500 | 0.844335 | 8.057228e-59 | -8.615850e-47 |
Msa0032430 | Msa0878500 | 0.843030 | 1.800108e-58 | -8.615850e-47 |
Msa0032580 | Msa0878500 | 0.825548 | 4.413549e-54 | -8.615850e-47 |
Msa0034270 | Msa0878500 | 0.803663 | 3.130979e-49 | -8.615850e-47 |
Msa0040450 | Msa0878500 | 0.830900 | 2.263245e-55 | -8.615850e-47 |
Msa0040690 | Msa0878500 | 0.828228 | 1.010496e-54 | -8.615850e-47 |
Msa0063890 | Msa0878500 | 0.810822 | 9.519350e-51 | -8.615850e-47 |
Msa0074320 | Msa0878500 | 0.817027 | 4.079462e-52 | -8.615850e-47 |
Msa0079080 | Msa0878500 | 0.819742 | 9.898007e-53 | -8.615850e-47 |
Msa0079380 | Msa0878500 | 0.840021 | 1.117178e-57 | -8.615850e-47 |
Msa0081930 | Msa0878500 | 0.820520 | 6.568652e-53 | -8.615850e-47 |
Msa0089630 | Msa0878500 | 0.807085 | 6.004168e-50 | -8.615850e-47 |
Msa0094120 | Msa0878500 | 0.820119 | 8.114838e-53 | -8.615850e-47 |
Msa0099220 | Msa0878500 | 0.814792 | 1.286165e-51 | -8.615850e-47 |
Msa0101440 | Msa0878500 | 0.813061 | 3.097688e-51 | -8.615850e-47 |
Msa0101700 | Msa0878500 | 0.814350 | 1.610835e-51 | -8.615850e-47 |
Msa0110970 | Msa0878500 | 0.835483 | 1.634624e-56 | -8.615850e-47 |
Msa0114060 | Msa0878500 | 0.814766 | 1.303484e-51 | -8.615850e-47 |
Msa0115270 | Msa0878500 | 0.804171 | 2.454986e-49 | -8.615850e-47 |
Msa0115360 | Msa0878500 | 0.801557 | 8.511180e-49 | -8.615850e-47 |
Msa0116770 | Msa0878500 | 0.818931 | 1.514870e-52 | -8.615850e-47 |
Msa0607050 | Msa0878500 | 0.817638 | 2.971983e-52 | -8.615850e-47 |
Msa0610430 | Msa0878500 | 0.821174 | 4.644291e-53 | -8.615850e-47 |
Msa0615440 | Msa0878500 | 0.813678 | 2.266928e-51 | -8.615850e-47 |
Msa0615590 | Msa0878500 | 0.804190 | 2.433302e-49 | -8.615850e-47 |
Msa0615710 | Msa0878500 | 0.816071 | 6.680865e-52 | -8.615850e-47 |
Msa0616160 | Msa0878500 | 0.809521 | 1.815790e-50 | -8.615850e-47 |
Msa0616220 | Msa0878500 | 0.813010 | 3.177844e-51 | -8.615850e-47 |
Msa0621490 | Msa0878500 | 0.840289 | 9.513704e-58 | -8.615850e-47 |
Msa0623790 | Msa0878500 | 0.836877 | 7.231357e-57 | -8.615850e-47 |
Msa0625720 | Msa0878500 | 0.820595 | 6.313123e-53 | -8.615850e-47 |
Msa0636070 | Msa0878500 | 0.829334 | 5.457026e-55 | -8.615850e-47 |
Msa0641670 | Msa0878500 | 0.817586 | 3.053834e-52 | -8.615850e-47 |
Msa0643560 | Msa0878500 | 0.848694 | 5.206808e-60 | -8.615850e-47 |
Msa0650020 | Msa0878500 | 0.828261 | 9.920129e-55 | -8.615850e-47 |
Msa0657970 | Msa0878500 | 0.802903 | 4.498160e-49 | -8.615850e-47 |
Msa0661190 | Msa0878500 | -0.825178 | 5.399940e-54 | -8.615850e-47 |
Msa0661650 | Msa0878500 | 0.809314 | 2.012064e-50 | -8.615850e-47 |
Msa0663390 | Msa0878500 | 0.822251 | 2.617630e-53 | -8.615850e-47 |
Msa0675410 | Msa0878500 | 0.827714 | 1.343477e-54 | -8.615850e-47 |
Msa0682330 | Msa0878500 | 0.803615 | 3.203923e-49 | -8.615850e-47 |
Msa0688960 | Msa0878500 | 0.841427 | 4.783082e-58 | -8.615850e-47 |
Msa0690150 | Msa0878500 | 0.805848 | 1.095091e-49 | -8.615850e-47 |
Msa0692950 | Msa0878500 | 0.803424 | 3.509941e-49 | -8.615850e-47 |
Msa0698490 | Msa0878500 | 0.816960 | 4.223722e-52 | -8.615850e-47 |
Msa0698660 | Msa0878500 | 0.820921 | 5.311932e-53 | -8.615850e-47 |
Msa0698920 | Msa0878500 | 0.819596 | 1.068683e-52 | -8.615850e-47 |
Msa0699550 | Msa0878500 | 0.801040 | 1.086087e-48 | -8.615850e-47 |
Msa0708520 | Msa0878500 | 0.813249 | 2.815931e-51 | -8.615850e-47 |
Msa0711780 | Msa0878500 | 0.808102 | 3.652526e-50 | -8.615850e-47 |
Msa0716840 | Msa0878500 | 0.816505 | 5.341219e-52 | -8.615850e-47 |
Msa0722810 | Msa0878500 | 0.809922 | 1.489175e-50 | -8.615850e-47 |
Msa0722960 | Msa0878500 | 0.812428 | 4.261297e-51 | -8.615850e-47 |
Msa0730430 | Msa0878500 | 0.803610 | 3.211421e-49 | -8.615850e-47 |
Msa0743720 | Msa0878500 | 0.835337 | 1.779166e-56 | -8.615850e-47 |
Msa0745790 | Msa0878500 | 0.801127 | 1.042637e-48 | -8.615850e-47 |
Msa0760380 | Msa0878500 | 0.818886 | 1.551043e-52 | -8.615850e-47 |
Msa0763830 | Msa0878500 | 0.821901 | 3.156062e-53 | -8.615850e-47 |
Msa0767300 | Msa0878500 | 0.805740 | 1.153466e-49 | -8.615850e-47 |
Msa0770720 | Msa0878500 | 0.804795 | 1.819842e-49 | -8.615850e-47 |
Msa0788850 | Msa0878500 | 0.800266 | 1.562044e-48 | -8.615850e-47 |
Msa0794670 | Msa0878500 | 0.814893 | 1.221381e-51 | -8.615850e-47 |
Msa0796530 | Msa0878500 | 0.804497 | 2.099438e-49 | -8.615850e-47 |
Msa0796700 | Msa0878500 | 0.813851 | 2.075765e-51 | -8.615850e-47 |
Msa0801760 | Msa0878500 | 0.806013 | 1.010706e-49 | -8.615850e-47 |
Msa0803890 | Msa0878500 | 0.813548 | 2.420890e-51 | -8.615850e-47 |
Msa0808270 | Msa0878500 | 0.826723 | 2.319534e-54 | -8.615850e-47 |
Msa0813720 | Msa0878500 | 0.817230 | 3.672324e-52 | -8.615850e-47 |
Msa0813740 | Msa0878500 | 0.821517 | 3.871107e-53 | -8.615850e-47 |
Msa0824660 | Msa0878500 | 0.804045 | 2.607759e-49 | -8.615850e-47 |
Msa0824680 | Msa0878500 | 0.819883 | 9.191857e-53 | -8.615850e-47 |
Msa0124060 | Msa0878500 | 0.831790 | 1.367302e-55 | -8.615850e-47 |
Msa0127050 | Msa0878500 | 0.828313 | 9.638441e-55 | -8.615850e-47 |
Msa0127660 | Msa0878500 | 0.802998 | 4.298502e-49 | -8.615850e-47 |
Msa0128020 | Msa0878500 | 0.808204 | 3.473801e-50 | -8.615850e-47 |
Msa0135380 | Msa0878500 | 0.803684 | 3.100274e-49 | -8.615850e-47 |
Msa0136070 | Msa0878500 | 0.850341 | 1.807403e-60 | -8.615850e-47 |
Msa0136100 | Msa0878500 | 0.835577 | 1.547681e-56 | -8.615850e-47 |
Msa0140570 | Msa0878500 | 0.827736 | 1.326871e-54 | -8.615850e-47 |
Msa0143140 | Msa0878500 | -0.812567 | 3.973343e-51 | -8.615850e-47 |
Msa0145440 | Msa0878500 | 0.811558 | 6.593707e-51 | -8.615850e-47 |
Msa0150820 | Msa0878500 | 0.838137 | 3.438892e-57 | -8.615850e-47 |
Msa0157290 | Msa0878500 | 0.827462 | 1.543587e-54 | -8.615850e-47 |
Msa0159340 | Msa0878500 | 0.803495 | 3.393038e-49 | -8.615850e-47 |
Msa0159930 | Msa0878500 | 0.809376 | 1.951506e-50 | -8.615850e-47 |
Msa0160550 | Msa0878500 | 0.836878 | 7.226413e-57 | -8.615850e-47 |
Msa0165210 | Msa0878500 | 0.802963 | 4.371258e-49 | -8.615850e-47 |
Msa0165220 | Msa0878500 | 0.831545 | 1.570956e-55 | -8.615850e-47 |
Msa0168500 | Msa0878500 | 0.834906 | 2.286179e-56 | -8.615850e-47 |
Msa0169310 | Msa0878500 | 0.831349 | 1.755223e-55 | -8.615850e-47 |
Msa0172070 | Msa0878500 | 0.850194 | 1.988424e-60 | -8.615850e-47 |
Msa0172970 | Msa0878500 | 0.826138 | 3.197237e-54 | -8.615850e-47 |
Msa0184960 | Msa0878500 | 0.813231 | 2.842685e-51 | -8.615850e-47 |
Msa0187690 | Msa0878500 | 0.825673 | 4.122717e-54 | -8.615850e-47 |
Msa0189290 | Msa0878500 | 0.807270 | 5.485612e-50 | -8.615850e-47 |
Msa0192510 | Msa0878500 | 0.845508 | 3.888731e-59 | -8.615850e-47 |
Msa0193120 | Msa0878500 | 0.873478 | 1.425991e-67 | -8.615850e-47 |
Msa0197660 | Msa0878500 | 0.813119 | 3.008336e-51 | -8.615850e-47 |
Msa0211150 | Msa0878500 | 0.813933 | 1.991102e-51 | -8.615850e-47 |
Msa0212310 | Msa0878500 | 0.807208 | 5.654142e-50 | -8.615850e-47 |
Msa0220720 | Msa0878500 | 0.807774 | 4.288700e-50 | -8.615850e-47 |
Msa0225740 | Msa0878500 | 0.826141 | 3.192005e-54 | -8.615850e-47 |
Msa0229990 | Msa0878500 | 0.801478 | 8.834974e-49 | -8.615850e-47 |
Msa0231650 | Msa0878500 | 0.808252 | 3.394025e-50 | -8.615850e-47 |
Msa0366240 | Msa0878500 | 0.807706 | 4.434701e-50 | -8.615850e-47 |
Msa0369050 | Msa0878500 | 0.825824 | 3.796161e-54 | -8.615850e-47 |
Msa0381550 | Msa0878500 | 0.811158 | 8.051626e-51 | -8.615850e-47 |
Msa0383800 | Msa0878500 | 0.803524 | 3.346421e-49 | -8.615850e-47 |
Msa0385580 | Msa0878500 | 0.823632 | 1.247476e-53 | -8.615850e-47 |
Msa0395960 | Msa0878500 | 0.804275 | 2.336050e-49 | -8.615850e-47 |
Msa0397750 | Msa0878500 | 0.811444 | 6.980984e-51 | -8.615850e-47 |
Msa0398710 | Msa0878500 | 0.806031 | 1.001884e-49 | -8.615850e-47 |
Msa0402650 | Msa0878500 | 0.834875 | 2.326962e-56 | -8.615850e-47 |
Msa0424790 | Msa0878500 | 0.803497 | 3.388961e-49 | -8.615850e-47 |
Msa0425010 | Msa0878500 | 0.826021 | 3.409413e-54 | -8.615850e-47 |
Msa0432770 | Msa0878500 | 0.819197 | 1.318173e-52 | -8.615850e-47 |
Msa0433640 | Msa0878500 | 0.803282 | 3.755225e-49 | -8.615850e-47 |
Msa0436050 | Msa0878500 | 0.806053 | 9.916171e-50 | -8.615850e-47 |
Msa0440750 | Msa0878500 | 0.814835 | 1.258150e-51 | -8.615850e-47 |
Msa0442670 | Msa0878500 | 0.808691 | 2.734376e-50 | -8.615850e-47 |
Msa0443500 | Msa0878500 | 0.820753 | 5.806434e-53 | -8.615850e-47 |
Msa0449210 | Msa0878500 | 0.805504 | 1.293304e-49 | -8.615850e-47 |
Msa0467490 | Msa0878500 | 0.817437 | 3.299439e-52 | -8.615850e-47 |
Msa0469030 | Msa0878500 | 0.817065 | 4.001296e-52 | -8.615850e-47 |
Msa0480000 | Msa0878500 | 0.813690 | 2.252770e-51 | -8.615850e-47 |
Msa0481530 | Msa0878500 | 0.819164 | 1.340835e-52 | -8.615850e-47 |
Msa0239800 | Msa0878500 | 0.811750 | 5.987652e-51 | -8.615850e-47 |
Msa0240150 | Msa0878500 | 0.801288 | 9.664013e-49 | -8.615850e-47 |
Msa0241620 | Msa0878500 | 0.805267 | 1.449689e-49 | -8.615850e-47 |
Msa0241640 | Msa0878500 | 0.815904 | 7.278851e-52 | -8.615850e-47 |
Msa0260680 | Msa0878500 | 0.823010 | 1.743871e-53 | -8.615850e-47 |
Msa0262310 | Msa0878500 | 0.841729 | 3.982653e-58 | -8.615850e-47 |
Msa0262340 | Msa0878500 | 0.806410 | 8.336903e-50 | -8.615850e-47 |
Msa0268130 | Msa0878500 | 0.804868 | 1.756749e-49 | -8.615850e-47 |
Msa0272690 | Msa0878500 | 0.838787 | 2.336691e-57 | -8.615850e-47 |
Msa0277820 | Msa0878500 | 0.801353 | 9.373984e-49 | -8.615850e-47 |
Msa0279700 | Msa0878500 | 0.804691 | 1.913382e-49 | -8.615850e-47 |
Msa0279790 | Msa0878500 | 0.833757 | 4.438287e-56 | -8.615850e-47 |
Msa0280090 | Msa0878500 | 0.815030 | 1.139340e-51 | -8.615850e-47 |
Msa0292400 | Msa0878500 | 0.812349 | 4.432687e-51 | -8.615850e-47 |
Msa0297050 | Msa0878500 | 0.805157 | 1.528552e-49 | -8.615850e-47 |
Msa0298700 | Msa0878500 | 0.814329 | 1.628539e-51 | -8.615850e-47 |
Msa0299870 | Msa0878500 | 0.824648 | 7.203205e-54 | -8.615850e-47 |
Msa0309770 | Msa0878500 | 0.849585 | 2.942465e-60 | -8.615850e-47 |
Msa0317510 | Msa0878500 | 0.804618 | 1.981337e-49 | -8.615850e-47 |
Msa0318980 | Msa0878500 | 0.820098 | 8.208464e-53 | -8.615850e-47 |
Msa0320100 | Msa0878500 | 0.811621 | 6.388510e-51 | -8.615850e-47 |
Msa0333030 | Msa0878500 | 0.801842 | 7.438373e-49 | -8.615850e-47 |
Msa0334550 | Msa0878500 | 0.812212 | 4.750478e-51 | -8.615850e-47 |
Msa0337620 | Msa0878500 | 0.843441 | 1.398550e-58 | -8.615850e-47 |
Msa0339480 | Msa0878500 | 0.846540 | 2.037109e-59 | -8.615850e-47 |
Msa0340090 | Msa0878500 | 0.803338 | 3.655537e-49 | -8.615850e-47 |
Msa0342360 | Msa0878500 | 0.820206 | 7.753791e-53 | -8.615850e-47 |
Msa0345970 | Msa0878500 | 0.821854 | 3.234860e-53 | -8.615850e-47 |
Msa0483860 | Msa0878500 | 0.810497 | 1.119127e-50 | -8.615850e-47 |
Msa0487800 | Msa0878500 | 0.807650 | 4.557449e-50 | -8.615850e-47 |
Msa0488400 | Msa0878500 | 0.808399 | 3.156770e-50 | -8.615850e-47 |
Msa0500360 | Msa0878500 | 0.809130 | 2.202879e-50 | -8.615850e-47 |
Msa0501460 | Msa0878500 | 0.811322 | 7.417270e-51 | -8.615850e-47 |
Msa0507680 | Msa0878500 | 0.801523 | 8.647935e-49 | -8.615850e-47 |
Msa0509390 | Msa0878500 | 0.810205 | 1.294321e-50 | -8.615850e-47 |
Msa0510350 | Msa0878500 | 0.829491 | 4.997743e-55 | -8.615850e-47 |
Msa0511310 | Msa0878500 | 0.808495 | 3.011960e-50 | -8.615850e-47 |
Msa0511370 | Msa0878500 | 0.833526 | 5.070887e-56 | -8.615850e-47 |
Msa0516320 | Msa0878500 | 0.816017 | 6.869523e-52 | -8.615850e-47 |
Msa0520070 | Msa0878500 | 0.822561 | 2.217404e-53 | -8.615850e-47 |
Msa0521500 | Msa0878500 | 0.812694 | 3.726264e-51 | -8.615850e-47 |
Msa0529680 | Msa0878500 | 0.800151 | 1.648800e-48 | -8.615850e-47 |
Msa0529890 | Msa0878500 | 0.817998 | 2.465468e-52 | -8.615850e-47 |
Msa0541360 | Msa0878500 | 0.829688 | 4.474660e-55 | -8.615850e-47 |
Msa0541410 | Msa0878500 | 0.819925 | 8.992121e-53 | -8.615850e-47 |
Msa0541860 | Msa0878500 | 0.802033 | 6.798065e-49 | -8.615850e-47 |
Msa0565960 | Msa0878500 | 0.833015 | 6.798262e-56 | -8.615850e-47 |
Msa0578040 | Msa0878500 | 0.802469 | 5.527123e-49 | -8.615850e-47 |
Msa0585300 | Msa0878500 | 0.816759 | 4.686182e-52 | -8.615850e-47 |
Msa0585560 | Msa0878500 | 0.813369 | 2.650334e-51 | -8.615850e-47 |
Msa0593650 | Msa0878500 | 0.827594 | 1.435401e-54 | -8.615850e-47 |
Msa0596800 | Msa0878500 | 0.804078 | 2.567402e-49 | -8.615850e-47 |
Msa0598720 | Msa0878500 | 0.814433 | 1.544508e-51 | -8.615850e-47 |
Msa0598810 | Msa0878500 | 0.807878 | 4.076063e-50 | -8.615850e-47 |
Msa0601850 | Msa0878500 | 0.812158 | 4.879620e-51 | -8.615850e-47 |
Msa0602250 | Msa0878500 | 0.801875 | 7.324773e-49 | -8.615850e-47 |
Msa0602310 | Msa0878500 | 0.809002 | 2.345966e-50 | -8.615850e-47 |
Msa0602390 | Msa0878500 | 0.833064 | 6.608991e-56 | -8.615850e-47 |
Msa0844240 | Msa0878500 | 0.806023 | 1.006114e-49 | -8.615850e-47 |
Msa0850960 | Msa0878500 | 0.820910 | 5.344353e-53 | -8.615850e-47 |
Msa0853540 | Msa0878500 | 0.802096 | 6.597443e-49 | -8.615850e-47 |
Msa0864250 | Msa0878500 | 0.801718 | 7.887230e-49 | -8.615850e-47 |
Msa0871270 | Msa0878500 | 0.830321 | 3.135869e-55 | -8.615850e-47 |
Msa0876200 | Msa0878500 | 0.836184 | 1.085584e-56 | -8.615850e-47 |
Msa0878500 | Msa0880140 | 0.827699 | 1.354653e-54 | -8.615850e-47 |
Msa0878500 | Msa0888580 | 0.800059 | 1.721521e-48 | -8.615850e-47 |
Msa0878500 | Msa0894390 | 0.819162 | 1.342168e-52 | -8.615850e-47 |
Msa0878500 | Msa0920610 | 0.815064 | 1.119616e-51 | -8.615850e-47 |
Msa0878500 | Msa0920870 | 0.814899 | 1.217619e-51 | -8.615850e-47 |
Msa0878500 | Msa0935670 | 0.800796 | 1.218473e-48 | -8.615850e-47 |
Msa0878500 | Msa0938210 | 0.803970 | 2.703874e-49 | -8.615850e-47 |
Msa0878500 | Msa0938220 | 0.842908 | 1.939276e-58 | -8.615850e-47 |
Msa0878500 | Msa0944190 | 0.968683 | 5.002521e-129 | -8.615850e-47 |
Msa0878500 | Msa0945970 | 0.862094 | 6.464414e-64 | -8.615850e-47 |
Msa0878500 | Msa0947660 | 0.811376 | 7.220098e-51 | -8.615850e-47 |
Msa0878500 | Msa0959360 | 0.819621 | 1.054880e-52 | -8.615850e-47 |
Msa0878500 | Msa0965490 | 0.807757 | 4.324659e-50 | -8.615850e-47 |
Msa0878500 | Msa0968590 | 0.802744 | 4.851448e-49 | -8.615850e-47 |
Msa0878500 | Msa0975340 | 0.801561 | 8.494684e-49 | -8.615850e-47 |
Msa0878500 | Msa0979730 | 0.809929 | 1.483654e-50 | -8.615850e-47 |
Msa0878500 | Msa0981060 | 0.956220 | 4.923630e-114 | -8.615850e-47 |
Msa0878500 | Msa0993290 | 0.820082 | 8.276195e-53 | -8.615850e-47 |
Msa0878500 | Msa0993600 | 0.816575 | 5.151657e-52 | -8.615850e-47 |
Msa0878500 | Msa0994950 | 0.814659 | 1.376458e-51 | -8.615850e-47 |
Msa0878500 | Msa0999970 | 0.819630 | 1.050196e-52 | -8.615850e-47 |
Msa0878500 | Msa1003620 | 0.809511 | 1.825455e-50 | -8.615850e-47 |
Msa0878500 | Msa1003750 | 0.814220 | 1.721725e-51 | -8.615850e-47 |
Msa0878500 | Msa1014500 | 0.806222 | 9.137037e-50 | -8.615850e-47 |
Msa0878500 | Msa1014540 | 0.823722 | 1.188506e-53 | -8.615850e-47 |
Msa0878500 | Msa1018980 | 0.834352 | 3.149469e-56 | -8.615850e-47 |
Msa0878500 | Msa1019640 | 0.805230 | 1.475805e-49 | -8.615850e-47 |
Msa0878500 | Msa1023400 | 0.837037 | 6.584053e-57 | -8.615850e-47 |
Msa0878500 | Msa1037420 | 0.809286 | 2.039883e-50 | -8.615850e-47 |
Msa0878500 | Msa1043690 | 0.802974 | 4.347740e-49 | -8.615850e-47 |
Msa0878500 | Msa1046020 | 0.807996 | 3.846937e-50 | -8.615850e-47 |
Msa0878500 | Msa1046060 | 0.808305 | 3.306644e-50 | -8.615850e-47 |
Msa0878500 | Msa1051200 | 0.812877 | 3.397620e-51 | -8.615850e-47 |
Msa0878500 | Msa1066490 | 0.800137 | 1.659227e-48 | -8.615850e-47 |
Msa0878500 | Msa1079590 | 0.800240 | 1.581443e-48 | -8.615850e-47 |
Msa0878500 | Msa1081150 | 0.811252 | 7.684237e-51 | -8.615850e-47 |
Msa0878500 | Msa1082500 | 0.804179 | 2.445355e-49 | -8.615850e-47 |
Msa0878500 | Msa1084960 | 0.800074 | 1.709385e-48 | -8.615850e-47 |
Msa0878500 | Msa1087710 | 0.838174 | 3.362812e-57 | -8.615850e-47 |
Msa0878500 | Msa1104370 | 0.814547 | 1.457180e-51 | -8.615850e-47 |
Msa0878500 | Msa1106700 | 0.821261 | 4.435200e-53 | -8.615850e-47 |
Msa0878500 | Msa1111110 | 0.807837 | 4.157875e-50 | -8.615850e-47 |
Msa0878500 | Msa1120530 | 0.810054 | 1.394708e-50 | -8.615850e-47 |
Msa0878500 | Msa1121440 | 0.824314 | 8.633755e-54 | -8.615850e-47 |
Msa0878500 | Msa1124960 | 0.802666 | 5.034850e-49 | -8.615850e-47 |
Msa0878500 | Msa1147710 | 0.829469 | 5.059025e-55 | -8.615850e-47 |
Msa0878500 | Msa1147900 | 0.800866 | 1.178650e-48 | -8.615850e-47 |
Msa0878500 | Msa1154710 | 0.814016 | 1.908984e-51 | -8.615850e-47 |
Msa0878500 | Msa1162270 | 0.802192 | 6.304654e-49 | -8.615850e-47 |
Msa0878500 | Msa1168160 | 0.800058 | 1.722286e-48 | -8.615850e-47 |
Msa0878500 | Msa1171710 | 0.809172 | 2.157268e-50 | -8.615850e-47 |
Msa0878500 | Msa1181850 | 0.805832 | 1.103290e-49 | -8.615850e-47 |
Msa0878500 | Msa1181860 | 0.809122 | 2.211558e-50 | -8.615850e-47 |
Msa0878500 | Msa1203250 | 0.816800 | 4.587599e-52 | -8.615850e-47 |
Msa0878500 | Msa1204090 | 0.810597 | 1.065028e-50 | -8.615850e-47 |
Msa0878500 | Msa1206670 | 0.825428 | 4.714047e-54 | -8.615850e-47 |
Msa0878500 | Msa1209460 | 0.840953 | 6.372512e-58 | -8.615850e-47 |
Msa0878500 | Msa1220280 | 0.836268 | 1.033460e-56 | -8.615850e-47 |
Msa0878500 | Msa1220380 | 0.834229 | 3.382479e-56 | -8.615850e-47 |
Msa0878500 | Msa1225700 | 0.825998 | 3.451970e-54 | -8.615850e-47 |
Msa0878500 | Msa1242220 | 0.813437 | 2.561077e-51 | -8.615850e-47 |
Msa0878500 | Msa1242240 | 0.825609 | 4.270470e-54 | -8.615850e-47 |
Msa0878500 | Msa1249490 | 0.802873 | 4.562279e-49 | -8.615850e-47 |
Msa0878500 | Msa1265890 | 0.844502 | 7.267679e-59 | -8.615850e-47 |
Msa0878500 | Msa1275800 | 0.848033 | 7.931659e-60 | -8.615850e-47 |
Msa0878500 | Msa1283840 | 0.827440 | 1.562484e-54 | -8.615850e-47 |
Msa0878500 | Msa1284260 | 0.817604 | 3.025850e-52 | -8.615850e-47 |
Msa0878500 | Msa1287460 | 0.825344 | 4.935213e-54 | -8.615850e-47 |
Msa0878500 | Msa1291890 | 0.808735 | 2.675990e-50 | -8.615850e-47 |
Msa0878500 | Msa1298820 | 0.808750 | 2.657085e-50 | -8.615850e-47 |
Msa0878500 | Msa1303480 | 0.806187 | 9.292318e-50 | -8.615850e-47 |
Msa0878500 | Msa1306860 | 0.805426 | 1.342792e-49 | -8.615850e-47 |
Msa0878500 | Msa1322890 | 0.812213 | 4.746905e-51 | -8.615850e-47 |
Msa0878500 | Msa1324100 | 0.800368 | 1.489626e-48 | -8.615850e-47 |
Msa0878500 | Msa1327050 | 0.808386 | 3.177493e-50 | -8.615850e-47 |
Msa0878500 | Msa1330410 | 0.824405 | 8.216332e-54 | -8.615850e-47 |
Msa0878500 | Msa1343070 | 0.804401 | 2.199030e-49 | -8.615850e-47 |
Msa0878500 | Msa1348490 | 0.803437 | 3.488377e-49 | -8.615850e-47 |
Msa0878500 | Msa1351730 | 0.810379 | 1.187052e-50 | -8.615850e-47 |
Msa0878500 | Msa1353330 | 0.814468 | 1.517261e-51 | -8.615850e-47 |
Msa0878500 | Msa1353980 | 0.802507 | 5.428931e-49 | -8.615850e-47 |
Msa0878500 | Msa1371430 | 0.812387 | 4.349985e-51 | -8.615850e-47 |
Msa0878500 | Msa1374120 | 0.833792 | 4.350818e-56 | -8.615850e-47 |
Msa0878500 | Msa1382620 | 0.805539 | 1.271462e-49 | -8.615850e-47 |
Msa0878500 | Msa1385770 | 0.821363 | 4.201254e-53 | -8.615850e-47 |
Msa0878500 | Msa1386780 | 0.802787 | 4.753692e-49 | -8.615850e-47 |
Msa0878500 | Msa1392200 | 0.826904 | 2.100196e-54 | -8.615850e-47 |
Msa0878500 | Msa1392240 | 0.802147 | 6.438598e-49 | -8.615850e-47 |
Msa0878500 | Msa1400190 | 0.809639 | 1.712834e-50 | -8.615850e-47 |
Msa0878500 | Msa1402730 | 0.805032 | 1.623157e-49 | -8.615850e-47 |
Msa0878500 | Msa1409240 | 0.820815 | 5.618118e-53 | -8.615850e-47 |
Msa0878500 | Msa1411070 | 0.807773 | 4.290654e-50 | -8.615850e-47 |
Msa0878500 | Msa1415640 | 0.831428 | 1.679026e-55 | -8.615850e-47 |
Msa0878500 | Msa1416150 | 0.817361 | 3.432754e-52 | -8.615850e-47 |
Msa0878500 | Msa1417420 | 0.819856 | 9.324891e-53 | -8.615850e-47 |
Msa0878500 | Msa1417870 | 0.832007 | 1.208651e-55 | -8.615850e-47 |
Msa0878500 | Msa1419370 | 0.803216 | 3.874776e-49 | -8.615850e-47 |
Msa0878500 | Msa1423350 | 0.803941 | 2.741511e-49 | -8.615850e-47 |
Msa0878500 | Msa1426030 | 0.830099 | 3.553327e-55 | -8.615850e-47 |
Msa0878500 | Msa1429150 | 0.805850 | 1.093917e-49 | -8.615850e-47 |
Msa0878500 | Msa1434140 | 0.826230 | 3.040596e-54 | -8.615850e-47 |
Msa0878500 | Msa1440560 | 0.807325 | 5.342039e-50 | -8.615850e-47 |
Msa0878500 | Msa1452240 | 0.816742 | 4.726448e-52 | -8.615850e-47 |
Msa0878500 | Msa1457910 | 0.803719 | 3.048831e-49 | -8.615850e-47 |
Msa0878500 | Msa1464810 | 0.813448 | 2.546023e-51 | -8.615850e-47 |
Msa0878500 | Msa1464830 | 0.803298 | 3.726195e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0878500 | MtrunA17_Chr6g0460991 | 99.338 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 5.50e-110 | 308 |
Msa0878500 | MtrunA17_Chr1g0195701 | 50.435 | 115 | 56 | 1 | 1 | 114 | 1 | 115 | 4.07e-38 | 128 |
Msa0878500 | MtrunA17_Chr7g0269271 | 50.000 | 108 | 53 | 1 | 1 | 107 | 1 | 108 | 4.80e-33 | 116 |
Msa0878500 | MtrunA17_Chr6g0465301 | 46.032 | 126 | 65 | 2 | 1 | 123 | 1 | 126 | 4.48e-32 | 112 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0878500 | AT3G03773.1 | 72.185 | 151 | 41 | 1 | 1 | 151 | 1 | 150 | 1.79e-75 | 222 |
Msa0878500 | AT3G03773.2 | 71.523 | 151 | 42 | 1 | 1 | 151 | 55 | 204 | 5.12e-74 | 220 |
Msa0878500 | AT3G03773.3 | 75.221 | 113 | 27 | 1 | 1 | 113 | 1 | 112 | 4.42e-57 | 174 |
Msa0878500 | AT4G02450.2 | 44.737 | 114 | 61 | 2 | 1 | 113 | 1 | 113 | 1.59e-29 | 108 |
Msa0878500 | AT4G02450.1 | 44.737 | 114 | 61 | 2 | 1 | 113 | 1 | 113 | 1.62e-29 | 108 |
Find 58 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTTACCTTCTCTGCTTCT+AGG | 0.161269 | 6_1:+19605169 | Msa0878500:CDS |
CGCTGTGCCCAGAGAACTTC+TGG | 0.233437 | 6_1:-19605072 | None:intergenic |
ATTTATTCCAATCAACTTTC+AGG | 0.279329 | 6_1:-19605782 | None:intergenic |
AGCTTTAGCTTGGAACTTTA+CGG | 0.318131 | 6_1:+19605210 | Msa0878500:CDS |
TGAAAGTTGATTGGAATAAA+TGG | 0.325851 | 6_1:+19605784 | Msa0878500:CDS |
TAGGGTTGTAAAACTAAAAC+TGG | 0.339082 | 6_1:+19605672 | Msa0878500:intron |
CGTCCATCATCGTCAGATAT+TGG | 0.361939 | 6_1:-19608449 | None:intergenic |
TTCTGTGAAGTGTGAGCCTC+AGG | 0.376022 | 6_1:+19605143 | Msa0878500:CDS |
ATAAAATCTGAGTGGTGCTT+TGG | 0.378229 | 6_1:+19609624 | Msa0878500:three_prime_UTR |
GTCGCCATCCAGAAGTTCTC+TGG | 0.391191 | 6_1:+19605064 | Msa0878500:intron |
TCAATTGTTGTTGTTAGAGT+TGG | 0.394547 | 6_1:+19609796 | Msa0878500:three_prime_UTR |
TTCAAGGAGATGGAATTATA+TGG | 0.406270 | 6_1:+19609530 | Msa0878500:three_prime_UTR |
ATTATATGGAAGTGTTATAT+AGG | 0.409310 | 6_1:+19609544 | Msa0878500:three_prime_UTR |
CAAAAGTTGATGAAGCTTCA+AGG | 0.422552 | 6_1:+19609514 | Msa0878500:three_prime_UTR |
CACCATACCTGAAAGTTGAT+TGG | 0.430676 | 6_1:+19605775 | Msa0878500:CDS |
AAGTTCCAAGCTAAAGCTAT+AGG | 0.431266 | 6_1:-19605205 | None:intergenic |
CAATTGTTGTTGTTAGAGTT+GGG | 0.432885 | 6_1:+19609797 | Msa0878500:three_prime_UTR |
TAACAACAACAATTGATGTC+AGG | 0.435310 | 6_1:-19609789 | None:intergenic |
CTGGGCACAGCGTTCTGGTA+AGG | 0.451788 | 6_1:+19605083 | Msa0878500:CDS |
TTCCAATCAACTTTCAGGTA+TGG | 0.454166 | 6_1:-19605777 | None:intergenic |
GACAAAGAGGTTGGTGGAAA+AGG | 0.458246 | 6_1:+19605727 | Msa0878500:CDS |
TGGAAGTGTTATATAGGTGC+AGG | 0.463244 | 6_1:+19609550 | Msa0878500:three_prime_UTR |
TTGTTGTTAGAGTTGGGAAT+AGG | 0.467711 | 6_1:+19609803 | Msa0878500:three_prime_UTR |
TCTTGCAGATCTCCCTGACT+TGG | 0.470280 | 6_1:+19609456 | Msa0878500:intron |
GTTTACCTTCTCTGCTTCTA+GGG | 0.475165 | 6_1:+19605170 | Msa0878500:CDS |
ACAGAAACATCCTTGGCATC+AGG | 0.484531 | 6_1:-19605126 | None:intergenic |
TTGATGAAGCTTCAAGGAGA+TGG | 0.499101 | 6_1:+19609520 | Msa0878500:three_prime_UTR |
TGAATCCTATAGCTTTAGCT+TGG | 0.502986 | 6_1:+19605200 | Msa0878500:CDS |
TCAACTTTCAGGTATGGTGC+AGG | 0.517519 | 6_1:-19605771 | None:intergenic |
AGATCTCCCTGACTTGGAAA+AGG | 0.525126 | 6_1:+19609462 | Msa0878500:intron |
TTGACTCTTTGATGTGTCGT+TGG | 0.526952 | 6_1:-19603897 | None:intergenic |
CCCTGACTTGGAAAAGGCTA+GGG | 0.528158 | 6_1:+19609468 | Msa0878500:CDS |
TCCCTGACTTGGAAAAGGCT+AGG | 0.531404 | 6_1:+19609467 | Msa0878500:CDS |
GGAATAGGTTGAGCCGAGCT+AGG | 0.538504 | 6_1:+19609818 | Msa0878500:three_prime_UTR |
CATCAGGTAGAGCAATAGTC+AGG | 0.541944 | 6_1:-19605110 | None:intergenic |
GATGAAAGCAGTGACGATGA+AGG | 0.545274 | 6_1:+19608589 | Msa0878500:CDS |
ACACTTCACAGAAACATCCT+TGG | 0.552534 | 6_1:-19605133 | None:intergenic |
GATAGTCTACAAGTCAAACT+TGG | 0.553100 | 6_1:-19609852 | None:intergenic |
CAATATCTGACGATGATGGA+CGG | 0.555023 | 6_1:+19608450 | Msa0878500:CDS |
TTCAGAAAGGACAAAGAGGT+TGG | 0.555066 | 6_1:+19605718 | Msa0878500:CDS |
GAACCAATATCTGACGATGA+TGG | 0.555270 | 6_1:+19608446 | Msa0878500:CDS |
AACAACAACAATTGATGTCA+GGG | 0.560965 | 6_1:-19609788 | None:intergenic |
TCTCACTCAGCTCAAGAATG+AGG | 0.568493 | 6_1:+19603943 | Msa0878500:exon |
AGAAAGGACAAAGAGGTTGG+TGG | 0.573743 | 6_1:+19605721 | Msa0878500:CDS |
AATATCTGACGATGATGGAC+GGG | 0.575138 | 6_1:+19608451 | Msa0878500:CDS |
TCGCCATCCAGAAGTTCTCT+GGG | 0.582774 | 6_1:+19605065 | Msa0878500:CDS |
TTGAACCCTAGAAGCAGAGA+AGG | 0.586114 | 6_1:-19605175 | None:intergenic |
ATACTATGCTCAATTCAGAA+AGG | 0.596991 | 6_1:+19605705 | Msa0878500:CDS |
GTGCCCAGAGAACTTCTGGA+TGG | 0.615220 | 6_1:-19605068 | None:intergenic |
GGAAGTGTTATATAGGTGCA+GGG | 0.618632 | 6_1:+19609551 | Msa0878500:three_prime_UTR |
TCTGTGAAGTGTGAGCCTCA+GGG | 0.627276 | 6_1:+19605144 | Msa0878500:CDS |
GAGCCGAGCTAGGCTATGCA+AGG | 0.630588 | 6_1:+19609828 | Msa0878500:three_prime_UTR |
GGACCTTGCATAGCCTAGCT+CGG | 0.631296 | 6_1:-19609831 | None:intergenic |
TATTGCTCTACCTGATGCCA+AGG | 0.634051 | 6_1:+19605116 | Msa0878500:CDS |
TTACGGATCGATTCAACCTG+AGG | 0.640397 | 6_1:+19605227 | Msa0878500:CDS |
TCAATTCAGAAAGGACAAAG+AGG | 0.648365 | 6_1:+19605714 | Msa0878500:CDS |
CTGTATATATAAAATCTGAG+TGG | 0.718139 | 6_1:+19609616 | Msa0878500:three_prime_UTR |
GAGAAGGTAAACAAACCCTG+AGG | 0.771648 | 6_1:-19605159 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTTTATTTTTTAAAAA+AGG | + | chr6_1:19609088-19609107 | Msa0878500:intron | 0.0% |
!! | AATAACAAAAAAATTGAAAT+GGG | - | chr6_1:19604051-19604070 | None:intergenic | 10.0% |
!! | TAATAACAAAAAAATTGAAA+TGG | - | chr6_1:19604052-19604071 | None:intergenic | 10.0% |
!!! | TTTATTATGTAATTGAATTT+TGG | + | chr6_1:19604625-19604644 | Msa0878500:intron | 10.0% |
!!! | AATTAATTTGATTTGATTTT+TGG | + | chr6_1:19605027-19605046 | Msa0878500:intron | 10.0% |
!!! | TTATCTATTTAATTTAGATT+CGG | - | chr6_1:19607229-19607248 | None:intergenic | 10.0% |
!!! | AATATTTTCTCAAATTAAAT+AGG | + | chr6_1:19608264-19608283 | Msa0878500:intron | 10.0% |
!! | TATATTATGAAATAAAGTAA+GGG | - | chr6_1:19609027-19609046 | None:intergenic | 10.0% |
!! | ATATATTATGAAATAAAGTA+AGG | - | chr6_1:19609028-19609047 | None:intergenic | 10.0% |
!!! | TTACTTTATTTCATAATATA+TGG | + | chr6_1:19609027-19609046 | Msa0878500:intron | 10.0% |
!!! | TTTTCATCATTATTTTTACA+AGG | - | chr6_1:19604114-19604133 | None:intergenic | 15.0% |
!! | TTTATTAAGTAATTGAATAC+TGG | + | chr6_1:19604411-19604430 | Msa0878500:intron | 15.0% |
!!! | ATCATAAAGTATTTTCTAAT+TGG | + | chr6_1:19605845-19605864 | Msa0878500:intron | 15.0% |
!! | TAAGATACTAAGATTAAAAA+TGG | + | chr6_1:19606052-19606071 | Msa0878500:intron | 15.0% |
!! | CAAAAGATATTAAATAAACA+AGG | - | chr6_1:19606387-19606406 | None:intergenic | 15.0% |
!!! | ATAAAAAAATGTTTTTCATC+TGG | + | chr6_1:19606734-19606753 | Msa0878500:intron | 15.0% |
!!! | TAATGTGCATATTTATTTTT+TGG | - | chr6_1:19606798-19606817 | None:intergenic | 15.0% |
!! | TATACTTAAGATATGTAAAA+AGG | + | chr6_1:19606839-19606858 | Msa0878500:intron | 15.0% |
!!! | ATAAGCTATTTCTATATTAA+AGG | + | chr6_1:19608813-19608832 | Msa0878500:intron | 15.0% |
!!! | ATTCTATTTTTCTTTAACTA+TGG | + | chr6_1:19609181-19609200 | Msa0878500:intron | 15.0% |
!! | TTTACATGTTACAAACAAAT+GGG | - | chr6_1:19604165-19604184 | None:intergenic | 20.0% |
!! | TTATTGAGTATATTGAATGT+TGG | + | chr6_1:19604210-19604229 | Msa0878500:intron | 20.0% |
!!! | TGCTGATATGATTTTAATAA+TGG | + | chr6_1:19604279-19604298 | Msa0878500:intron | 20.0% |
!! | CAGATTATTGAAACTTTATA+AGG | - | chr6_1:19604585-19604604 | None:intergenic | 20.0% |
!! | CAGAATATTGAAATGTTATA+GGG | - | chr6_1:19604786-19604805 | None:intergenic | 20.0% |
!! | TCAGAATATTGAAATGTTAT+AGG | - | chr6_1:19604787-19604806 | None:intergenic | 20.0% |
!! | TATCGAAATATTTGATATTG+CGG | + | chr6_1:19604854-19604873 | Msa0878500:intron | 20.0% |
!! | AAAAAAAAATCTTTCGACTA+GGG | - | chr6_1:19605004-19605023 | None:intergenic | 20.0% |
!! | AAAAAAAAAATCTTTCGACT+AGG | - | chr6_1:19605005-19605024 | None:intergenic | 20.0% |
!!! | ACGTAATATAAAGGTTTTAA+AGG | + | chr6_1:19605343-19605362 | Msa0878500:intron | 20.0% |
!!! | AAGATTAACCCTTATTTATA+GGG | + | chr6_1:19605947-19605966 | Msa0878500:intron | 20.0% |
!! | GTTTCTAATCATAATTAAAC+AGG | + | chr6_1:19605977-19605996 | Msa0878500:intron | 20.0% |
!! | TATATTTGTAAGTTTCTTTG+TGG | + | chr6_1:19606446-19606465 | Msa0878500:intron | 20.0% |
!! | ATATTTGTAAGTTTCTTTGT+GGG | + | chr6_1:19606447-19606466 | Msa0878500:intron | 20.0% |
!!! | ATTACCAACAAATATCATTT+TGG | - | chr6_1:19608678-19608697 | None:intergenic | 20.0% |
!! | TTCTTTAACTATGGATTTAA+AGG | + | chr6_1:19609190-19609209 | Msa0878500:intron | 20.0% |
!!! | ATTATATGGAAGTGTTATAT+AGG | + | chr6_1:19609544-19609563 | Msa0878500:three_prime_UTR | 20.0% |
!! | TTACAAGGATGTGATTTTTA+TGG | - | chr6_1:19604099-19604118 | None:intergenic | 25.0% |
! | CTTTACATGTTACAAACAAA+TGG | - | chr6_1:19604166-19604185 | None:intergenic | 25.0% |
!! | AATTGTGGTTTTTGATATTG+TGG | + | chr6_1:19604238-19604257 | Msa0878500:intron | 25.0% |
! | CAGAATATTGAAACTCTATA+GGG | - | chr6_1:19604381-19604400 | None:intergenic | 25.0% |
! | TCAGAATATTGAAACTCTAT+AGG | - | chr6_1:19604382-19604401 | None:intergenic | 25.0% |
!!! | AACATTTTGATATGATTCTC+CGG | - | chr6_1:19604461-19604480 | None:intergenic | 25.0% |
! | ATATCAAAATGTTGTTGACA+CGG | + | chr6_1:19604468-19604487 | Msa0878500:intron | 25.0% |
!!! | TGAATTTTGGTTTTGAAATG+TGG | + | chr6_1:19604638-19604657 | Msa0878500:intron | 25.0% |
!! | AAATGTGGTTTTTGATATTG+TGG | + | chr6_1:19604653-19604672 | Msa0878500:intron | 25.0% |
! | TTTGATTATGTACATACTTG+TGG | + | chr6_1:19605295-19605314 | Msa0878500:intron | 25.0% |
! | TATATCCTAGTTTCAAATTG+TGG | + | chr6_1:19605319-19605338 | Msa0878500:intron | 25.0% |
! | AATTGTGGTACGTAATATAA+AGG | + | chr6_1:19605334-19605353 | Msa0878500:intron | 25.0% |
!!! | TGCATTTTTTCACATTATCA+AGG | + | chr6_1:19605409-19605428 | Msa0878500:intron | 25.0% |
! | AACTAAAACAATTCGTAAAG+TGG | - | chr6_1:19605585-19605604 | None:intergenic | 25.0% |
!!! | TTCCTTATCATGTTTTGAAA+AGG | + | chr6_1:19605611-19605630 | Msa0878500:intron | 25.0% |
!! | AACCTTTTCAAAACATGATA+AGG | - | chr6_1:19605616-19605635 | None:intergenic | 25.0% |
!!! | TTATCATGTTTTGAAAAGGT+TGG | + | chr6_1:19605615-19605634 | Msa0878500:intron | 25.0% |
! | ATATTGTCATTGTTGTATCT+AGG | + | chr6_1:19605653-19605672 | Msa0878500:intron | 25.0% |
! | TATTGTCATTGTTGTATCTA+GGG | + | chr6_1:19605654-19605673 | Msa0878500:intron | 25.0% |
! | ATTTATTCCAATCAACTTTC+AGG | - | chr6_1:19605785-19605804 | None:intergenic | 25.0% |
!! | TGAAAGTTGATTGGAATAAA+TGG | + | chr6_1:19605784-19605803 | Msa0878500:CDS | 25.0% |
! | CATGAACATTTATATCTGTA+TGG | + | chr6_1:19605894-19605913 | Msa0878500:intron | 25.0% |
!! | GAAGATTAACCCTTATTTAT+AGG | + | chr6_1:19605946-19605965 | Msa0878500:intron | 25.0% |
!! | TATACCTTTTTACGTCATTT+CGG | + | chr6_1:19606215-19606234 | Msa0878500:intron | 25.0% |
! | TATTTGTAAGTTTCTTTGTG+GGG | + | chr6_1:19606448-19606467 | Msa0878500:intron | 25.0% |
! | ATTAGGATTATAACTGTGTT+AGG | + | chr6_1:19606491-19606510 | Msa0878500:intron | 25.0% |
! | TGTTGCCAATGATATATAAA+TGG | + | chr6_1:19606524-19606543 | Msa0878500:intron | 25.0% |
! | AAAGGCCATTTATATATCAT+TGG | - | chr6_1:19606532-19606551 | None:intergenic | 25.0% |
! | AGAGAAATCCAATTTAATTG+CGG | + | chr6_1:19606682-19606701 | Msa0878500:intron | 25.0% |
! | TTATTGTACCGCAATTAAAT+TGG | - | chr6_1:19606693-19606712 | None:intergenic | 25.0% |
!! | AAAAAATGTTTTTCATCTGG+TGG | + | chr6_1:19606737-19606756 | Msa0878500:intron | 25.0% |
! | AGTATATAATATCGTGTCAT+CGG | - | chr6_1:19606825-19606844 | None:intergenic | 25.0% |
!!! | GATGTATAGTGTTGTTTTTA+CGG | + | chr6_1:19606995-19607014 | Msa0878500:intron | 25.0% |
!! | TTTTGGATTAAGCAAGATTT+TGG | + | chr6_1:19607334-19607353 | Msa0878500:intron | 25.0% |
! | CAACTTGAGTTCAAATATTA+TGG | + | chr6_1:19607367-19607386 | Msa0878500:intron | 25.0% |
! | TCTAATATGGTAAAAACTGA+GGG | - | chr6_1:19607607-19607626 | None:intergenic | 25.0% |
!! | TAAGTAAATAATCAAGTTGC+AGG | - | chr6_1:19607739-19607758 | None:intergenic | 25.0% |
! | ATTTACTTAGATGCAAAAGA+TGG | + | chr6_1:19607750-19607769 | Msa0878500:intron | 25.0% |
!! | TGAACAGAAAAGATTTTACA+AGG | - | chr6_1:19608047-19608066 | None:intergenic | 25.0% |
! | TAATTAAAGTAGAGATGCAA+TGG | - | chr6_1:19608633-19608652 | None:intergenic | 25.0% |
! | CTTACCAAAATGATATTTGT+TGG | + | chr6_1:19608671-19608690 | Msa0878500:intron | 25.0% |
! | ATATGCTCTATGAAATATGT+AGG | + | chr6_1:19608717-19608736 | Msa0878500:intron | 25.0% |
!! | AAATAAAGTAAGGGTTTGTT+TGG | - | chr6_1:19609018-19609037 | None:intergenic | 25.0% |
! | AGACAATTATCATTTATGTC+AGG | - | chr6_1:19609439-19609458 | None:intergenic | 25.0% |
!! | CACTCAGATTTTATATATAC+AGG | - | chr6_1:19609618-19609637 | None:intergenic | 25.0% |
! | CTGTATATATAAAATCTGAG+TGG | + | chr6_1:19609616-19609635 | Msa0878500:three_prime_UTR | 25.0% |
!!! | CTTGTTTTTCTTTGATTACA+TGG | + | chr6_1:19609661-19609680 | Msa0878500:three_prime_UTR | 25.0% |
!!! | ACTATCATCGACTTATTTTT+AGG | + | chr6_1:19609869-19609888 | Msa0878500:three_prime_UTR | 25.0% |
TTCAGTGAAAGTAAAACGAA+GGG | - | chr6_1:19603979-19603998 | None:intergenic | 30.0% | |
TTTCAGTGAAAGTAAAACGA+AGG | - | chr6_1:19603980-19603999 | None:intergenic | 30.0% | |
!!! | TGAATGTTGGTTTTGAATTG+TGG | + | chr6_1:19604223-19604242 | Msa0878500:intron | 30.0% |
!!! | TGAATACTGGTTTTAAATCG+TGG | + | chr6_1:19604424-19604443 | Msa0878500:intron | 30.0% |
AATCGTGGTATTTGATATTC+CGG | + | chr6_1:19604439-19604458 | Msa0878500:intron | 30.0% | |
ATCAAAAACTGTTGATGTTG+CGG | + | chr6_1:19604527-19604546 | Msa0878500:intron | 30.0% | |
! | GTGAGTGATCTTTTCTTAAA+TGG | + | chr6_1:19605249-19605268 | Msa0878500:intron | 30.0% |
TGAAAAAATGCAGTCAAATG+TGG | - | chr6_1:19605401-19605420 | None:intergenic | 30.0% | |
TATGAAAAACTTTCATAGCC+CGG | - | chr6_1:19605479-19605498 | None:intergenic | 30.0% | |
AAAACAATTCGTAAAGTGGA+CGG | - | chr6_1:19605581-19605600 | None:intergenic | 30.0% | |
ACAATGACAATATTTCAGAC+AGG | - | chr6_1:19605646-19605665 | None:intergenic | 30.0% | |
TAGGGTTGTAAAACTAAAAC+TGG | + | chr6_1:19605672-19605691 | Msa0878500:intron | 30.0% | |
ATACTATGCTCAATTCAGAA+AGG | + | chr6_1:19605705-19605724 | Msa0878500:CDS | 30.0% | |
ACTAACATGTAGAAATCACA+TGG | - | chr6_1:19605924-19605943 | None:intergenic | 30.0% | |
CCGTTTATCCCTATAAATAA+GGG | - | chr6_1:19605958-19605977 | None:intergenic | 30.0% | |
! | CCCTTATTTATAGGGATAAA+CGG | + | chr6_1:19605955-19605974 | Msa0878500:intron | 30.0% |
ACCGTTTATCCCTATAAATA+AGG | - | chr6_1:19605959-19605978 | None:intergenic | 30.0% | |
TCTAACAGTCATTATGATCT+TGG | + | chr6_1:19606131-19606150 | Msa0878500:intron | 30.0% | |
ATTTGTAAGTTTCTTTGTGG+GGG | + | chr6_1:19606449-19606468 | Msa0878500:intron | 30.0% | |
GTTCACTACAATTAGGATAA+AGG | - | chr6_1:19606550-19606569 | None:intergenic | 30.0% | |
AGACTAAGTTCACTACAATT+AGG | - | chr6_1:19606557-19606576 | None:intergenic | 30.0% | |
ATTGAAAGCTCTCTAACAAA+AGG | + | chr6_1:19606656-19606675 | Msa0878500:intron | 30.0% | |
TTGAAAGCTCTCTAACAAAA+GGG | + | chr6_1:19606657-19606676 | Msa0878500:intron | 30.0% | |
TAAGATATGTAAAAAGGCTG+AGG | + | chr6_1:19606845-19606864 | Msa0878500:intron | 30.0% | |
AAGATATGTAAAAAGGCTGA+GGG | + | chr6_1:19606846-19606865 | Msa0878500:intron | 30.0% | |
GTTCAGAATCCATTTATCAA+TGG | - | chr6_1:19607023-19607042 | None:intergenic | 30.0% | |
TGAGTTCAAATATTATGGTC+TGG | + | chr6_1:19607372-19607391 | Msa0878500:intron | 30.0% | |
AAAAGTTGTTGGAAGTTGAA+TGG | + | chr6_1:19607530-19607549 | Msa0878500:intron | 30.0% | |
AAAGTTGTTGGAAGTTGAAT+GGG | + | chr6_1:19607531-19607550 | Msa0878500:intron | 30.0% | |
GTCTAATATGGTAAAAACTG+AGG | - | chr6_1:19607608-19607627 | None:intergenic | 30.0% | |
!! | TTCATTTTAGTCATCTCTAG+TGG | + | chr6_1:19607799-19607818 | Msa0878500:intron | 30.0% |
! | ATGTTTTGTGCTTTACTTCT+TGG | + | chr6_1:19607940-19607959 | Msa0878500:intron | 30.0% |
GGTAATAGTATATAGAGACA+AGG | + | chr6_1:19607961-19607980 | Msa0878500:intron | 30.0% | |
!!! | ACCATGTTTCTAGTTTTCAA+AGG | + | chr6_1:19608111-19608130 | Msa0878500:intron | 30.0% |
! | ACCTTTGAAAACTAGAAACA+TGG | - | chr6_1:19608115-19608134 | None:intergenic | 30.0% |
! | ACCTTGCTTTCTTATTTGTA+TGG | + | chr6_1:19608340-19608359 | Msa0878500:intron | 30.0% |
! | CCTTGCTTTCTTATTTGTAT+GGG | + | chr6_1:19608341-19608360 | Msa0878500:intron | 30.0% |
TTATTTGTATGGGTTTCTTG+AGG | + | chr6_1:19608351-19608370 | Msa0878500:intron | 30.0% | |
TGTCTGATTAAAGTTTCTGT+TGG | + | chr6_1:19608410-19608429 | Msa0878500:intron | 30.0% | |
ATTGAACAAGATTAAGTACC+TGG | - | chr6_1:19608535-19608554 | None:intergenic | 30.0% | |
CTTATGCATAAGCACTTATA+TGG | - | chr6_1:19608798-19608817 | None:intergenic | 30.0% | |
! | AGTCAAATTGTTTTCATGCA+AGG | + | chr6_1:19608845-19608864 | Msa0878500:intron | 30.0% |
ACTAAGCTGAAAACAGTTTA+TGG | + | chr6_1:19608907-19608926 | Msa0878500:intron | 30.0% | |
! | GCTTATTTGAGTTTATCTAC+TGG | - | chr6_1:19608991-19609010 | None:intergenic | 30.0% |
!!! | GCAAAATAGTGGATTTTCAT+TGG | - | chr6_1:19609254-19609273 | None:intergenic | 30.0% |
TTGAAACTGATAGTATGACA+TGG | + | chr6_1:19609302-19609321 | Msa0878500:intron | 30.0% | |
TATCATTTATGTCAGGTGTA+AGG | - | chr6_1:19609432-19609451 | None:intergenic | 30.0% | |
TTCAAGGAGATGGAATTATA+TGG | + | chr6_1:19609530-19609549 | Msa0878500:three_prime_UTR | 30.0% | |
AACAACAACAATTGATGTCA+GGG | - | chr6_1:19609791-19609810 | None:intergenic | 30.0% | |
TAACAACAACAATTGATGTC+AGG | - | chr6_1:19609792-19609811 | None:intergenic | 30.0% | |
! | TCAATTGTTGTTGTTAGAGT+TGG | + | chr6_1:19609796-19609815 | Msa0878500:three_prime_UTR | 30.0% |
! | CAATTGTTGTTGTTAGAGTT+GGG | + | chr6_1:19609797-19609816 | Msa0878500:three_prime_UTR | 30.0% |
!!! | CTTATTTTTAGGCATGAATC+TGG | + | chr6_1:19609880-19609899 | Msa0878500:three_prime_UTR | 30.0% |
TGAAAGTAAAACGAAGGGAA+AGG | - | chr6_1:19603974-19603993 | None:intergenic | 35.0% | |
! | TTTTAATAATGGCCGTGTTG+TGG | + | chr6_1:19604290-19604309 | Msa0878500:intron | 35.0% |
TTGTGGAGAATTGTGATCAA+AGG | + | chr6_1:19604670-19604689 | Msa0878500:intron | 35.0% | |
! | AAGAATTTTGAACCGCAACA+CGG | - | chr6_1:19604720-19604739 | None:intergenic | 35.0% |
TTGCGGAAAATCACATTCAA+AGG | + | chr6_1:19604871-19604890 | Msa0878500:intron | 35.0% | |
AAAATCACATTCAAAGGCAG+CGG | + | chr6_1:19604877-19604896 | Msa0878500:intron | 35.0% | |
!! | TGAATCCTATAGCTTTAGCT+TGG | + | chr6_1:19605200-19605219 | Msa0878500:CDS | 35.0% |
AAGTTCCAAGCTAAAGCTAT+AGG | - | chr6_1:19605208-19605227 | None:intergenic | 35.0% | |
!! | AGCTTTAGCTTGGAACTTTA+CGG | + | chr6_1:19605210-19605229 | Msa0878500:CDS | 35.0% |
! | ACGTACCACAATTTGAAACT+AGG | - | chr6_1:19605327-19605346 | None:intergenic | 35.0% |
CAATCACAATGTAGTTGAAG+AGG | - | chr6_1:19605369-19605388 | None:intergenic | 35.0% | |
! | CCATTTTACCAATTGTTGTC+CGG | + | chr6_1:19605457-19605476 | Msa0878500:intron | 35.0% |
! | CATTTTACCAATTGTTGTCC+GGG | + | chr6_1:19605458-19605477 | Msa0878500:intron | 35.0% |
! | TGAAAAAGTGCAGACAAATG+TGG | - | chr6_1:19605526-19605545 | None:intergenic | 35.0% |
AAACAATTCGTAAAGTGGAC+GGG | - | chr6_1:19605580-19605599 | None:intergenic | 35.0% | |
!!! | CATGTTTTGAAAAGGTTGGA+TGG | + | chr6_1:19605619-19605638 | Msa0878500:intron | 35.0% |
TCAATTCAGAAAGGACAAAG+AGG | + | chr6_1:19605714-19605733 | Msa0878500:CDS | 35.0% | |
! | TTCCAATCAACTTTCAGGTA+TGG | - | chr6_1:19605780-19605799 | None:intergenic | 35.0% |
AACAGTCATTATGATCTTGG+AGG | + | chr6_1:19606134-19606153 | Msa0878500:intron | 35.0% | |
AGAAATAAGCCAGGTTTGAT+AGG | - | chr6_1:19606168-19606187 | None:intergenic | 35.0% | |
AGAATGAGTTACTGCAGAAA+GGG | - | chr6_1:19606289-19606308 | None:intergenic | 35.0% | |
TAGAATGAGTTACTGCAGAA+AGG | - | chr6_1:19606290-19606309 | None:intergenic | 35.0% | |
TTTGTAAGTTTCTTTGTGGG+GGG | + | chr6_1:19606450-19606469 | Msa0878500:intron | 35.0% | |
! | ACTTAGTCTAGAATGTTAGC+AGG | + | chr6_1:19606568-19606587 | Msa0878500:intron | 35.0% |
! | TCTAGAATGTTAGCAGGAAT+GGG | + | chr6_1:19606574-19606593 | Msa0878500:intron | 35.0% |
ATTACGCAATGAGGAAACTT+GGG | - | chr6_1:19606629-19606648 | None:intergenic | 35.0% | |
ATGAGTAAGATTACGCAATG+AGG | - | chr6_1:19606638-19606657 | None:intergenic | 35.0% | |
TCACTAGCTCATAACTAATC+AGG | - | chr6_1:19606939-19606958 | None:intergenic | 35.0% | |
AGTAGGATCAATGACTATAC+TGG | + | chr6_1:19607121-19607140 | Msa0878500:intron | 35.0% | |
TTCTTCACCAGAGATAACAA+TGG | - | chr6_1:19607187-19607206 | None:intergenic | 35.0% | |
ATTGTTATCTCTGGTGAAGA+AGG | + | chr6_1:19607186-19607205 | Msa0878500:intron | 35.0% | |
TCCTTAACACAACAAACAGA+TGG | + | chr6_1:19607431-19607450 | Msa0878500:intron | 35.0% | |
CCTTAACACAACAAACAGAT+GGG | + | chr6_1:19607432-19607451 | Msa0878500:intron | 35.0% | |
GCGATGTTAAGAAAAGTTGT+TGG | + | chr6_1:19607519-19607538 | Msa0878500:intron | 35.0% | |
ACCTATAGCACACAATATCA+AGG | + | chr6_1:19607556-19607575 | Msa0878500:intron | 35.0% | |
TATGGTAAAAACTGAGGGTA+AGG | - | chr6_1:19607602-19607621 | None:intergenic | 35.0% | |
CGTCAAATTAGCGTCTAATA+TGG | - | chr6_1:19607620-19607639 | None:intergenic | 35.0% | |
GCTAATTTGACGACTATACT+CGG | + | chr6_1:19607628-19607647 | Msa0878500:intron | 35.0% | |
TGACAATATCTAGTATAGCC+TGG | - | chr6_1:19607657-19607676 | None:intergenic | 35.0% | |
TAAATAGGACCTTAGCATCA+TGG | + | chr6_1:19608279-19608298 | Msa0878500:intron | 35.0% | |
CCCATACAAATAAGAAAGCA+AGG | - | chr6_1:19608344-19608363 | None:intergenic | 35.0% | |
! | TTTCATCTTTTGCAGTTTGC+TGG | + | chr6_1:19608559-19608578 | Msa0878500:intron | 35.0% |
TGAAATATGTAGGCTCAGTT+TGG | + | chr6_1:19608727-19608746 | Msa0878500:intron | 35.0% | |
! | AAACAGTTGTTTGATTTCGC+AGG | - | chr6_1:19609160-19609179 | None:intergenic | 35.0% |
!! | AGTGGATTTTCATTGGATGT+CGG | - | chr6_1:19609247-19609266 | None:intergenic | 35.0% |
TGAGTAATGTGGCAAAATAG+TGG | - | chr6_1:19609265-19609284 | None:intergenic | 35.0% | |
CTCTCAAAAGTTGAGTAATG+TGG | - | chr6_1:19609276-19609295 | None:intergenic | 35.0% | |
ATTTATGTCAGGTGTAAGGT+GGG | - | chr6_1:19609428-19609447 | None:intergenic | 35.0% | |
!! | CAAAAGTTGATGAAGCTTCA+AGG | + | chr6_1:19609514-19609533 | Msa0878500:three_prime_UTR | 35.0% |
ATAAAATCTGAGTGGTGCTT+TGG | + | chr6_1:19609624-19609643 | Msa0878500:three_prime_UTR | 35.0% | |
! | GCTTTCTTTGTTGTGAATGT+TGG | + | chr6_1:19609699-19609718 | Msa0878500:intron | 35.0% |
CAGGGTTGTATAATCTCAAA+AGG | - | chr6_1:19609773-19609792 | None:intergenic | 35.0% | |
! | TTGTTGTTAGAGTTGGGAAT+AGG | + | chr6_1:19609803-19609822 | Msa0878500:three_prime_UTR | 35.0% |
GATAGTCTACAAGTCAAACT+TGG | - | chr6_1:19609855-19609874 | None:intergenic | 35.0% | |
!! | TGCCAACTGAGCTTTTAAAA+AGG | - | chr6_1:19609906-19609925 | None:intergenic | 35.0% |
TTGACTCTTTGATGTGTCGT+TGG | - | chr6_1:19603900-19603919 | None:intergenic | 40.0% | |
TTGTGGAGAATCACGATCAA+AGG | + | chr6_1:19604255-19604274 | Msa0878500:intron | 40.0% | |
TGTTGACACGGTTTCAATGA+TGG | + | chr6_1:19604480-19604499 | Msa0878500:intron | 40.0% | |
!!! | TGCTGATATGGTTTTGACGA+TGG | + | chr6_1:19604694-19604713 | Msa0878500:intron | 40.0% |
CTTCAATGAAGTCTGTGTTC+AGG | + | chr6_1:19604906-19604925 | Msa0878500:intron | 40.0% | |
AGTCTAAGTCGCAACATCAA+AGG | - | chr6_1:19604956-19604975 | None:intergenic | 40.0% | |
ACACTTCACAGAAACATCCT+TGG | - | chr6_1:19605136-19605155 | None:intergenic | 40.0% | |
TGTTTACCTTCTCTGCTTCT+AGG | + | chr6_1:19605169-19605188 | Msa0878500:CDS | 40.0% | |
GTTTACCTTCTCTGCTTCTA+GGG | + | chr6_1:19605170-19605189 | Msa0878500:CDS | 40.0% | |
AAGAAAAGATCACTCACCTC+AGG | - | chr6_1:19605246-19605265 | None:intergenic | 40.0% | |
CTACATTGTGATTGCAACTG+CGG | + | chr6_1:19605375-19605394 | Msa0878500:intron | 40.0% | |
CCGGACAACAATTGGTAAAA+TGG | - | chr6_1:19605460-19605479 | None:intergenic | 40.0% | |
CCACATTGTGATTGCAATTG+CGG | + | chr6_1:19605500-19605519 | Msa0878500:intron | 40.0% | |
TTCAGAAAGGACAAAGAGGT+TGG | + | chr6_1:19605718-19605737 | Msa0878500:CDS | 40.0% | |
! | CACCATACCTGAAAGTTGAT+TGG | + | chr6_1:19605775-19605794 | Msa0878500:CDS | 40.0% |
GTTCAATTGCCTATCAAACC+TGG | + | chr6_1:19606156-19606175 | Msa0878500:intron | 40.0% | |
ATGTGTTGGAGAAATAAGCC+AGG | - | chr6_1:19606177-19606196 | None:intergenic | 40.0% | |
! | TGGCTTATTTCTCCAACACA+TGG | + | chr6_1:19606176-19606195 | Msa0878500:intron | 40.0% |
CAAGCCGAAATGACGTAAAA+AGG | - | chr6_1:19606222-19606241 | None:intergenic | 40.0% | |
AAACAAAATGAGCATGGCTG+AGG | - | chr6_1:19606254-19606273 | None:intergenic | 40.0% | |
CTGCTCAAACAAAATGAGCA+TGG | - | chr6_1:19606260-19606279 | None:intergenic | 40.0% | |
ATATGCAGTGACTACATTGC+AGG | - | chr6_1:19606351-19606370 | None:intergenic | 40.0% | |
TCATAAACTGCCACATGTGA+CGG | - | chr6_1:19606414-19606433 | None:intergenic | 40.0% | |
TTGTAAGTTTCTTTGTGGGG+GGG | + | chr6_1:19606451-19606470 | Msa0878500:intron | 40.0% | |
! | GTCTAGAATGTTAGCAGGAA+TGG | + | chr6_1:19606573-19606592 | Msa0878500:intron | 40.0% |
GATTACGCAATGAGGAAACT+TGG | - | chr6_1:19606630-19606649 | None:intergenic | 40.0% | |
GTTCTGATCAAACTCAAGGT+AGG | - | chr6_1:19606917-19606936 | None:intergenic | 40.0% | |
! | TCAGGTTCTGATCAAACTCA+AGG | - | chr6_1:19606921-19606940 | None:intergenic | 40.0% |
TTTACGGCGCCATTGATAAA+TGG | + | chr6_1:19607011-19607030 | Msa0878500:intron | 40.0% | |
! | TTAGCTGCTTTGGCTAGTAT+AGG | + | chr6_1:19607051-19607070 | Msa0878500:intron | 40.0% |
! | TAGCTGCTTTGGCTAGTATA+GGG | + | chr6_1:19607052-19607071 | Msa0878500:intron | 40.0% |
AGGATCAATGACTATACTGG+TGG | + | chr6_1:19607124-19607143 | Msa0878500:intron | 40.0% | |
TCACCAGAGATAACAATGGT+AGG | - | chr6_1:19607183-19607202 | None:intergenic | 40.0% | |
! | AAGAGTGACTGCTGTGATTT+TGG | + | chr6_1:19607317-19607336 | Msa0878500:intron | 40.0% |
TTGTTGTGTTAAGGAGAGGA+GGG | - | chr6_1:19607426-19607445 | None:intergenic | 40.0% | |
! | TTTGTTGTGTTAAGGAGAGG+AGG | - | chr6_1:19607427-19607446 | None:intergenic | 40.0% |
!! | CTGTTTGTTGTGTTAAGGAG+AGG | - | chr6_1:19607430-19607449 | None:intergenic | 40.0% |
!! | CCCATCTGTTTGTTGTGTTA+AGG | - | chr6_1:19607435-19607454 | None:intergenic | 40.0% |
GCCTTGATATTGTGTGCTAT+AGG | - | chr6_1:19607560-19607579 | None:intergenic | 40.0% | |
AGAAGAAATGTGACAAGCAG+TGG | - | chr6_1:19607716-19607735 | None:intergenic | 40.0% | |
TCATCTCTAGTGGTAGAAAG+TGG | + | chr6_1:19607809-19607828 | Msa0878500:intron | 40.0% | |
! | GAAAAATAGGTAGTGGTCAG+TGG | - | chr6_1:19607837-19607856 | None:intergenic | 40.0% |
AGAAGGGGAAAAATAGGTAG+TGG | - | chr6_1:19607844-19607863 | None:intergenic | 40.0% | |
AGAGACAAGGAGACTAACAA+TGG | + | chr6_1:19607974-19607993 | Msa0878500:intron | 40.0% | |
GAACCAATATCTGACGATGA+TGG | + | chr6_1:19608446-19608465 | Msa0878500:CDS | 40.0% | |
!! | CAATATCTGACGATGATGGA+CGG | + | chr6_1:19608450-19608469 | Msa0878500:CDS | 40.0% |
!! | AATATCTGACGATGATGGAC+GGG | + | chr6_1:19608451-19608470 | Msa0878500:CDS | 40.0% |
GTAGAGTTTAACAAACCTCC+AGG | + | chr6_1:19608514-19608533 | Msa0878500:intron | 40.0% | |
GAACAAGATTAAGTACCTGG+AGG | - | chr6_1:19608532-19608551 | None:intergenic | 40.0% | |
AACCACTTGTGAGGCTATTT+GGG | - | chr6_1:19608964-19608983 | None:intergenic | 40.0% | |
AAACCACTTGTGAGGCTATT+TGG | - | chr6_1:19608965-19608984 | None:intergenic | 40.0% | |
ACTGGTATAAACCACTTGTG+AGG | - | chr6_1:19608973-19608992 | None:intergenic | 40.0% | |
CATTTATGTCAGGTGTAAGG+TGG | - | chr6_1:19609429-19609448 | None:intergenic | 40.0% | |
TTGATGAAGCTTCAAGGAGA+TGG | + | chr6_1:19609520-19609539 | Msa0878500:three_prime_UTR | 40.0% | |
!! | TGGAAGTGTTATATAGGTGC+AGG | + | chr6_1:19609550-19609569 | Msa0878500:three_prime_UTR | 40.0% |
!! | GGAAGTGTTATATAGGTGCA+GGG | + | chr6_1:19609551-19609570 | Msa0878500:three_prime_UTR | 40.0% |
!! | GGCCTTTTTAAAAGCTCAGT+TGG | + | chr6_1:19609901-19609920 | Msa0878500:three_prime_UTR | 40.0% |
TCTCACTCAGCTCAAGAATG+AGG | + | chr6_1:19603943-19603962 | Msa0878500:exon | 45.0% | |
ATGTCTCTGCAACCACAACA+CGG | - | chr6_1:19604305-19604324 | None:intergenic | 45.0% | |
ATCAAAACCCTCTGATGTCG+CGG | + | chr6_1:19604323-19604342 | Msa0878500:intron | 45.0% | |
! | CAATGATGGTCGTGTTGTTG+CGG | + | chr6_1:19604494-19604513 | Msa0878500:intron | 45.0% |
TGCGGCTCATATTGTAGTTG+AGG | + | chr6_1:19604545-19604564 | Msa0878500:intron | 45.0% | |
GTGATCAAAGGCTGCTGATA+TGG | + | chr6_1:19604682-19604701 | Msa0878500:intron | 45.0% | |
CATCAGGTAGAGCAATAGTC+AGG | - | chr6_1:19605113-19605132 | None:intergenic | 45.0% | |
TATTGCTCTACCTGATGCCA+AGG | + | chr6_1:19605116-19605135 | Msa0878500:CDS | 45.0% | |
ACAGAAACATCCTTGGCATC+AGG | - | chr6_1:19605129-19605148 | None:intergenic | 45.0% | |
GAGAAGGTAAACAAACCCTG+AGG | - | chr6_1:19605162-19605181 | None:intergenic | 45.0% | |
TTGAACCCTAGAAGCAGAGA+AGG | - | chr6_1:19605178-19605197 | None:intergenic | 45.0% | |
! | TTACGGATCGATTCAACCTG+AGG | + | chr6_1:19605227-19605246 | Msa0878500:CDS | 45.0% |
TTCATAGCCCGGACAACAAT+TGG | - | chr6_1:19605468-19605487 | None:intergenic | 45.0% | |
CCGCAATTGCAATCACAATG+TGG | - | chr6_1:19605503-19605522 | None:intergenic | 45.0% | |
AGAAAGGACAAAGAGGTTGG+TGG | + | chr6_1:19605721-19605740 | Msa0878500:CDS | 45.0% | |
!! | GACAAAGAGGTTGGTGGAAA+AGG | + | chr6_1:19605727-19605746 | Msa0878500:CDS | 45.0% |
! | TCAACTTTCAGGTATGGTGC+AGG | - | chr6_1:19605774-19605793 | None:intergenic | 45.0% |
GTCAGCAAAGAACCATGTGT+TGG | - | chr6_1:19606191-19606210 | None:intergenic | 45.0% | |
CATAAACTGCCACATGTGAC+GGG | - | chr6_1:19606413-19606432 | None:intergenic | 45.0% | |
TGTAAGTTTCTTTGTGGGGG+GGG | + | chr6_1:19606452-19606471 | Msa0878500:intron | 45.0% | |
GGGGGGGGTAATAGAATATT+AGG | + | chr6_1:19606474-19606493 | Msa0878500:intron | 45.0% | |
GAATGTTAGCAGGAATGGGA+AGG | + | chr6_1:19606578-19606597 | Msa0878500:intron | 45.0% | |
ATGTAAAAAGGCTGAGGGTG+TGG | + | chr6_1:19606851-19606870 | Msa0878500:intron | 45.0% | |
GAGACGTTAATCCTAGCAGT+TGG | + | chr6_1:19606876-19606895 | Msa0878500:intron | 45.0% | |
GCAAAAATCTGCCAACTGCT+AGG | - | chr6_1:19606890-19606909 | None:intergenic | 45.0% | |
ATCTCACGAGCTCAGAATCT+AGG | - | chr6_1:19606978-19606997 | None:intergenic | 45.0% | |
ACCTCGTCTATTAGCTGCTT+TGG | + | chr6_1:19607041-19607060 | Msa0878500:intron | 45.0% | |
! | AGCTGCTTTGGCTAGTATAG+GGG | + | chr6_1:19607053-19607072 | Msa0878500:intron | 45.0% |
GTGCCTACCATTGTTATCTC+TGG | + | chr6_1:19607177-19607196 | Msa0878500:intron | 45.0% | |
ACAACAAACAGATGGGCCAA+AGG | + | chr6_1:19607439-19607458 | Msa0878500:intron | 45.0% | |
TCGTGAGTCATACACAACGA+AGG | + | chr6_1:19607497-19607516 | Msa0878500:intron | 45.0% | |
! | AGGTCGTGAGAGCATAATGT+TGG | - | chr6_1:19607582-19607601 | None:intergenic | 45.0% |
GATGCAAAAGATGGCATGAC+TGG | + | chr6_1:19607759-19607778 | Msa0878500:intron | 45.0% | |
GGGAAGAGAAGGGGAAAAAT+AGG | - | chr6_1:19607850-19607869 | None:intergenic | 45.0% | |
ATGACTGAAGACAGACTGCA+GGG | - | chr6_1:19607871-19607890 | None:intergenic | 45.0% | |
TTACAGGGACCATGATGCTA+AGG | - | chr6_1:19608291-19608310 | None:intergenic | 45.0% | |
! | ATGGTCCCTGTAATTTGCCT+TGG | + | chr6_1:19608298-19608317 | Msa0878500:intron | 45.0% |
! | TGGTCCCTGTAATTTGCCTT+GGG | + | chr6_1:19608299-19608318 | Msa0878500:intron | 45.0% |
GACACCCAAGGCAAATTACA+GGG | - | chr6_1:19608306-19608325 | None:intergenic | 45.0% | |
TGACACCCAAGGCAAATTAC+AGG | - | chr6_1:19608307-19608326 | None:intergenic | 45.0% | |
ATTTGCCTTGGGTGTCAGAT+TGG | + | chr6_1:19608310-19608329 | Msa0878500:intron | 45.0% | |
TTGAACCAATCTGACACCCA+AGG | - | chr6_1:19608318-19608337 | None:intergenic | 45.0% | |
CGTCCATCATCGTCAGATAT+TGG | - | chr6_1:19608452-19608471 | None:intergenic | 45.0% | |
GATGAAAGCAGTGACGATGA+AGG | + | chr6_1:19608589-19608608 | Msa0878500:CDS | 45.0% | |
ACTTGTGAGGCTATTTGGGA+GGG | - | chr6_1:19608960-19608979 | None:intergenic | 45.0% | |
AGATAGAGCAGATGCATGCA+TGG | - | chr6_1:19609063-19609082 | None:intergenic | 45.0% | |
AGGTGTAAGGTGGGAATAAG+AGG | - | chr6_1:19609419-19609438 | None:intergenic | 45.0% | |
!! | AGATCTCCCTGACTTGGAAA+AGG | + | chr6_1:19609462-19609481 | Msa0878500:intron | 45.0% |
!! | ATAAAAATAAATTGTTTAAA+AGG | - | chr6_1:19604610-19604629 | None:intergenic | 5.0% |
! | TTTTGACGATGGCCGTGTTG+CGG | + | chr6_1:19604705-19604724 | Msa0878500:intron | 50.0% |
ACATTCAAAGGCAGCGGACA+TGG | + | chr6_1:19604883-19604902 | Msa0878500:intron | 50.0% | |
GCGACTTAGACTACAGTTCG+CGG | + | chr6_1:19604964-19604983 | Msa0878500:intron | 50.0% | |
TCGCCATCCAGAAGTTCTCT+GGG | + | chr6_1:19605065-19605084 | Msa0878500:CDS | 50.0% | |
TTCTGTGAAGTGTGAGCCTC+AGG | + | chr6_1:19605143-19605162 | Msa0878500:CDS | 50.0% | |
TCTGTGAAGTGTGAGCCTCA+GGG | + | chr6_1:19605144-19605163 | Msa0878500:CDS | 50.0% | |
TGACTACATTGCAGGACGGT+TGG | - | chr6_1:19606343-19606362 | None:intergenic | 50.0% | |
GCAGTGACTACATTGCAGGA+CGG | - | chr6_1:19606347-19606366 | None:intergenic | 50.0% | |
!!! | CTTTTGAAGCCCGTCACATG+TGG | + | chr6_1:19606401-19606420 | Msa0878500:intron | 50.0% |
GTAAGTTTCTTTGTGGGGGG+GGG | + | chr6_1:19606453-19606472 | Msa0878500:intron | 50.0% | |
TAAGTTTCTTTGTGGGGGGG+GGG | + | chr6_1:19606454-19606473 | Msa0878500:intron | 50.0% | |
! | GCAGTTGGCAGATTTTTGCC+TGG | + | chr6_1:19606891-19606910 | Msa0878500:intron | 50.0% |
GATCAAACTCAAGGTAGGCC+AGG | - | chr6_1:19606912-19606931 | None:intergenic | 50.0% | |
GCCAAAGCAGCTAATAGACG+AGG | - | chr6_1:19607045-19607064 | None:intergenic | 50.0% | |
! | GCTGCTTTGGCTAGTATAGG+GGG | + | chr6_1:19607054-19607073 | Msa0878500:intron | 50.0% |
GGTAGAGCAGGTAGATGAGA+AGG | + | chr6_1:19607078-19607097 | Msa0878500:intron | 50.0% | |
CAGGTAGATGAGAAGGACAC+AGG | + | chr6_1:19607085-19607104 | Msa0878500:intron | 50.0% | |
GTAGATGAGAAGGACACAGG+AGG | + | chr6_1:19607088-19607107 | Msa0878500:intron | 50.0% | |
AGAAGGACACAGGAGGTGAT+GGG | + | chr6_1:19607095-19607114 | Msa0878500:intron | 50.0% | |
ACCACGAGCGATTGAGATTG+CGG | + | chr6_1:19607263-19607282 | Msa0878500:intron | 50.0% | |
GCGATTGAGATTGCGGAGTT+TGG | + | chr6_1:19607270-19607289 | Msa0878500:intron | 50.0% | |
CACAGCAGTCACTCTTCTGT+AGG | - | chr6_1:19607313-19607332 | None:intergenic | 50.0% | |
TAAGGAGAGGAGGGTGGTTT+GGG | - | chr6_1:19607417-19607436 | None:intergenic | 50.0% | |
TTAAGGAGAGGAGGGTGGTT+TGG | - | chr6_1:19607418-19607437 | None:intergenic | 50.0% | |
TTGTGTTAAGGAGAGGAGGG+TGG | - | chr6_1:19607423-19607442 | None:intergenic | 50.0% | |
GACGACTATACTCGGATTCC+AGG | + | chr6_1:19607636-19607655 | Msa0878500:intron | 50.0% | |
TGACTGAAGACAGACTGCAG+GGG | - | chr6_1:19607870-19607889 | None:intergenic | 50.0% | |
GATGACTGAAGACAGACTGC+AGG | - | chr6_1:19607872-19607891 | None:intergenic | 50.0% | |
CACTTGTGAGGCTATTTGGG+AGG | - | chr6_1:19608961-19608980 | None:intergenic | 50.0% | |
CTCCCAAATAGCCTCACAAG+TGG | + | chr6_1:19608959-19608978 | Msa0878500:intron | 50.0% | |
TCTTGCAGATCTCCCTGACT+TGG | + | chr6_1:19609456-19609475 | Msa0878500:intron | 50.0% | |
!! | TCCCTGACTTGGAAAAGGCT+AGG | + | chr6_1:19609467-19609486 | Msa0878500:CDS | 50.0% |
!! | CCCTAGCCTTTTCCAAGTCA+GGG | - | chr6_1:19609471-19609490 | None:intergenic | 50.0% |
!! | CCCTGACTTGGAAAAGGCTA+GGG | + | chr6_1:19609468-19609487 | Msa0878500:CDS | 50.0% |
ATCTGAGCCGCGACATCAGA+GGG | - | chr6_1:19604333-19604352 | None:intergenic | 55.0% | |
AATCTGAGCCGCGACATCAG+AGG | - | chr6_1:19604334-19604353 | None:intergenic | 55.0% | |
CTCGACTACAAGCTGAGCTG+TGG | - | chr6_1:19604748-19604767 | None:intergenic | 55.0% | |
CACAGCTCAGCTTGTAGTCG+AGG | + | chr6_1:19604746-19604765 | Msa0878500:intron | 55.0% | |
GTCGCCATCCAGAAGTTCTC+TGG | + | chr6_1:19605064-19605083 | Msa0878500:intron | 55.0% | |
GTGCCCAGAGAACTTCTGGA+TGG | - | chr6_1:19605071-19605090 | None:intergenic | 55.0% | |
AAGTTTCTTTGTGGGGGGGG+GGG | + | chr6_1:19606455-19606474 | Msa0878500:intron | 55.0% | |
GCTTTGGCTAGTATAGGGGG+TGG | + | chr6_1:19607057-19607076 | Msa0878500:intron | 55.0% | |
AGTATAGGGGGTGGTAGAGC+AGG | + | chr6_1:19607066-19607085 | Msa0878500:intron | 55.0% | |
GAGAAGGACACAGGAGGTGA+TGG | + | chr6_1:19607094-19607113 | Msa0878500:intron | 55.0% | |
!! | CAGGAGGTGATGGGTGTAGT+AGG | + | chr6_1:19607104-19607123 | Msa0878500:intron | 55.0% |
TCCGCAATCTCAATCGCTCG+TGG | - | chr6_1:19607267-19607286 | None:intergenic | 55.0% | |
AGACTGCAGGGGAAGAGAAG+GGG | - | chr6_1:19607859-19607878 | None:intergenic | 55.0% | |
CAGACTGCAGGGGAAGAGAA+GGG | - | chr6_1:19607860-19607879 | None:intergenic | 55.0% | |
ACAGACTGCAGGGGAAGAGA+AGG | - | chr6_1:19607861-19607880 | None:intergenic | 55.0% | |
!! | GCCCTAGCCTTTTCCAAGTC+AGG | - | chr6_1:19609472-19609491 | None:intergenic | 55.0% |
! | GGAATAGGTTGAGCCGAGCT+AGG | + | chr6_1:19609818-19609837 | Msa0878500:three_prime_UTR | 55.0% |
GGACCTTGCATAGCCTAGCT+CGG | - | chr6_1:19609834-19609853 | None:intergenic | 55.0% | |
CGCGGCTCAGATTGTAGTCG+AGG | + | chr6_1:19604341-19604360 | Msa0878500:intron | 60.0% | |
GGCTGCGACTGCAGAGACAT+TGG | + | chr6_1:19604927-19604946 | Msa0878500:intron | 60.0% | |
CGCTGTGCCCAGAGAACTTC+TGG | - | chr6_1:19605075-19605094 | None:intergenic | 60.0% | |
GTTCTCTGGGCACAGCGTTC+TGG | + | chr6_1:19605078-19605097 | Msa0878500:CDS | 60.0% | |
CTGGGCACAGCGTTCTGGTA+AGG | + | chr6_1:19605083-19605102 | Msa0878500:CDS | 60.0% | |
AGTTTCTTTGTGGGGGGGGG+GGG | + | chr6_1:19606456-19606475 | Msa0878500:intron | 60.0% | |
! | GAGGAGGGTGGTTTGGGTCA+GGG | - | chr6_1:19607411-19607430 | None:intergenic | 60.0% |
! | AGAGGAGGGTGGTTTGGGTC+AGG | - | chr6_1:19607412-19607431 | None:intergenic | 60.0% |
TCGAGCGCAATGAGCGGAGA+GGG | - | chr6_1:19607469-19607488 | None:intergenic | 60.0% | |
AGTCGCTCGAGCGCAATGAG+CGG | - | chr6_1:19607475-19607494 | None:intergenic | 60.0% | |
GAGCCGAGCTAGGCTATGCA+AGG | + | chr6_1:19609828-19609847 | Msa0878500:three_prime_UTR | 60.0% | |
GTTTCTTTGTGGGGGGGGGG+GGG | + | chr6_1:19606457-19606476 | Msa0878500:intron | 65.0% | |
TTTCTTTGTGGGGGGGGGGG+GGG | + | chr6_1:19606458-19606477 | Msa0878500:intron | 65.0% | |
CTCGAGCGCAATGAGCGGAG+AGG | - | chr6_1:19607470-19607489 | None:intergenic | 65.0% | |
TTCTTTGTGGGGGGGGGGGG+GGG | + | chr6_1:19606459-19606478 | Msa0878500:intron | 70.0% | |
!! | GAGCGGAGAGGGAGCGCCTT+TGG | - | chr6_1:19607458-19607477 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_1 | gene | 19603895 | 19609932 | 19603895 | ID=Msa0878500;Name=Msa0878500 |
chr6_1 | mRNA | 19603895 | 19609932 | 19603895 | ID=Msa0878500-mRNA-1;Parent=Msa0878500;Name=Msa0878500-mRNA-1;_AED=0.13;_eAED=0.13;_QI=65|1|1|1|0.83|0.71|7|367|151 |
chr6_1 | exon | 19603895 | 19603964 | 19603895 | ID=Msa0878500-mRNA-1:exon:5304;Parent=Msa0878500-mRNA-1 |
chr6_1 | exon | 19605065 | 19605248 | 19605065 | ID=Msa0878500-mRNA-1:exon:5305;Parent=Msa0878500-mRNA-1 |
chr6_1 | exon | 19605675 | 19605831 | 19605675 | ID=Msa0878500-mRNA-1:exon:5306;Parent=Msa0878500-mRNA-1 |
chr6_1 | exon | 19608444 | 19608472 | 19608444 | ID=Msa0878500-mRNA-1:exon:5307;Parent=Msa0878500-mRNA-1 |
chr6_1 | exon | 19608574 | 19608619 | 19608574 | ID=Msa0878500-mRNA-1:exon:5308;Parent=Msa0878500-mRNA-1 |
chr6_1 | exon | 19609464 | 19609707 | 19609464 | ID=Msa0878500-mRNA-1:exon:5309;Parent=Msa0878500-mRNA-1 |
chr6_1 | exon | 19609775 | 19609932 | 19609775 | ID=Msa0878500-mRNA-1:exon:5310;Parent=Msa0878500-mRNA-1 |
chr6_1 | five_prime_UTR | 19603895 | 19603959 | 19603895 | ID=Msa0878500-mRNA-1:five_prime_utr;Parent=Msa0878500-mRNA-1 |
chr6_1 | CDS | 19603960 | 19603964 | 19603960 | ID=Msa0878500-mRNA-1:cds;Parent=Msa0878500-mRNA-1 |
chr6_1 | CDS | 19605065 | 19605248 | 19605065 | ID=Msa0878500-mRNA-1:cds;Parent=Msa0878500-mRNA-1 |
chr6_1 | CDS | 19605675 | 19605831 | 19605675 | ID=Msa0878500-mRNA-1:cds;Parent=Msa0878500-mRNA-1 |
chr6_1 | CDS | 19608444 | 19608472 | 19608444 | ID=Msa0878500-mRNA-1:cds;Parent=Msa0878500-mRNA-1 |
chr6_1 | CDS | 19608574 | 19608619 | 19608574 | ID=Msa0878500-mRNA-1:cds;Parent=Msa0878500-mRNA-1 |
chr6_1 | CDS | 19609464 | 19609498 | 19609464 | ID=Msa0878500-mRNA-1:cds;Parent=Msa0878500-mRNA-1 |
chr6_1 | three_prime_UTR | 19609499 | 19609707 | 19609499 | ID=Msa0878500-mRNA-1:three_prime_utr;Parent=Msa0878500-mRNA-1 |
chr6_1 | three_prime_UTR | 19609775 | 19609932 | 19609775 | ID=Msa0878500-mRNA-1:three_prime_utr;Parent=Msa0878500-mRNA-1 |
Gene Sequence |
Protein sequence |