AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0136070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 110 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTCCTTTCATTCCTTTC+TGG 0.052010 1_3:-67857122 None:intergenic
AAAACCAATCTCAACATTTA+TGG 0.196922 1_3:-67856403 None:intergenic
TTCAAACTAAAGCCAATATT+TGG 0.198057 1_3:+67857447 Msa0136070:three_prime_UTR
AACATCTATAGCATATAAAA+AGG 0.223008 1_3:-67856565 None:intergenic
TAGGATTTGCATTATGATTA+AGG 0.224028 1_3:-67856176 None:intergenic
ATCTGATCATCCTCATTCTT+TGG 0.243825 1_3:-67857392 None:intergenic
TGAGGAAAAGGCCAGCATTT+AGG 0.247990 1_3:+67857018 Msa0136070:exon
CCTTTGCCCCTTGATTTATA+AGG 0.256774 1_3:+67856430 Msa0136070:five_prime_UTR
TTCCAATACTGTTTATATAA+AGG 0.258271 1_3:-67856476 None:intergenic
TTTCTGGAGGGTGGCTAGTA+TGG 0.266311 1_3:-67857106 None:intergenic
TTGGAAAGAAAACATCTTAA+TGG 0.290462 1_3:+67856493 Msa0136070:five_prime_UTR
TGAGAAATCACTGGCTAAAC+TGG 0.294321 1_3:+67856935 Msa0136070:CDS
AGTAGCTAACATCGAGAAAA+TGG 0.296815 1_3:-67856207 None:intergenic
GAGGAAAAGGCCAGCATTTA+GGG 0.296936 1_3:+67857019 Msa0136070:exon
TATAAAGAAATCATGAAAAT+TGG 0.297933 1_3:-67857540 None:intergenic
TTCTCTGTTTGAGTCTTAAT+AGG 0.302168 1_3:-67857326 None:intergenic
CTTCCTAGGTTCTCGCTTGT+TGG 0.303209 1_3:-67857210 None:intergenic
ATAACAAGCTTACCAAATAT+TGG 0.306733 1_3:-67857459 None:intergenic
GCCGTATATATTGTTGTATT+GGG 0.332162 1_3:+67856277 Msa0136070:five_prime_UTR
AGAGGAAGAGACAAATTTAA+TGG 0.334230 1_3:+67857287 Msa0136070:three_prime_UTR
ACCCAATACAACAATATATA+CGG 0.336082 1_3:-67856278 None:intergenic
TGCCGTATATATTGTTGTAT+TGG 0.350885 1_3:+67856276 Msa0136070:five_prime_UTR
TTTGACCTGTCTCCAACCTT+TGG 0.360011 1_3:-67856896 None:intergenic
AATATTTGGTAAGCTTGTTA+TGG 0.363167 1_3:+67857461 Msa0136070:three_prime_UTR
TAATATCACAATGATCGATT+TGG 0.373867 1_3:-67857614 None:intergenic
TCCTCTGCAATTCGCTTCTC+AGG 0.377354 1_3:-67857179 None:intergenic
TTCACCATAAATGTTGAGAT+TGG 0.378247 1_3:+67856399 Msa0136070:five_prime_UTR
GCTTCTCAGGTCTATCTAGA+TGG 0.381632 1_3:-67857166 None:intergenic
TACCTTTATATAAACAGTAT+TGG 0.401824 1_3:+67856474 Msa0136070:five_prime_UTR
TCAGGTCTATCTAGATGGTT+AGG 0.410188 1_3:-67857161 None:intergenic
ATAGGTTAACAGGGTTATCC+AGG 0.411868 1_3:+67857707 Msa0136070:three_prime_UTR
ACAACTGGAATTTGCTTTGA+CGG 0.420904 1_3:+67856330 Msa0136070:five_prime_UTR
TCATGAAAATTGGTAATCTC+TGG 0.425387 1_3:-67857530 None:intergenic
AAATGTTAATAAAAGACAAC+TGG 0.427278 1_3:+67856315 Msa0136070:five_prime_UTR
GATGAAAATCCATCCTTCCT+AGG 0.435435 1_3:-67857224 None:intergenic
TCTGTTGAGCACTTGAGCTC+TGG 0.435869 1_3:+67857668 Msa0136070:three_prime_UTR
GGGTTATCCCTAATGACAAC+GGG 0.439716 1_3:+67857728 Msa0136070:three_prime_UTR
TCCTTTCATTCCTTTCTGGA+GGG 0.447281 1_3:-67857118 None:intergenic
GGATGATCAGATTGCAAAGC+TGG 0.457045 1_3:+67857403 Msa0136070:three_prime_UTR
TTCCTTTCATTCCTTTCTGG+AGG 0.457901 1_3:-67857119 None:intergenic
AACAATATATACGGCAATCC+TGG 0.458072 1_3:-67856269 None:intergenic
CAACACCTTCTGTGAGGAAA+AGG 0.461132 1_3:+67857006 Msa0136070:exon
TTTACTGTCACTGTCGCAGC+TGG 0.462931 1_3:-67857077 None:intergenic
TAACATCGAGAAAATGGAAA+TGG 0.465359 1_3:-67856201 None:intergenic
ATCTTCTTCTCCCTAAATGC+TGG 0.485997 1_3:-67857029 None:intergenic
AAAGGTATATGCTCAAAGTA+AGG 0.495225 1_3:+67856866 Msa0136070:CDS
AATGGACATTGAAGATAACT+TGG 0.498931 1_3:+67856511 Msa0136070:five_prime_UTR
ACTGACCTCCTTATAAATCA+AGG 0.501564 1_3:-67856438 None:intergenic
GCATATACCGAGGCACTTGA+AGG 0.502861 1_3:-67856643 None:intergenic
TTTCATTCCTTTCTGGAGGG+TGG 0.506208 1_3:-67857115 None:intergenic
TTTCATCAAGAGTAAGGTAT+GGG 0.512420 1_3:+67857240 Msa0136070:three_prime_UTR
GATGCTGTTAAAACATGCAT+TGG 0.513238 1_3:-67856669 None:intergenic
TGGTCGAAGCACTGGTCAAA+GGG 0.514223 1_3:+67856717 Msa0136070:CDS
GTGCAGGTTGGTCGAAGCAC+TGG 0.521659 1_3:+67856709 Msa0136070:CDS
AATCTCAACATTTATGGTGA+AGG 0.523731 1_3:-67856397 None:intergenic
CGAGAAAATGGAAATGGTGT+AGG 0.524036 1_3:-67856195 None:intergenic
ACCGAGGCACTTGAAGGCAT+GGG 0.524350 1_3:-67856637 None:intergenic
AGAAGCGAATTGCAGAGGAC+AGG 0.525004 1_3:+67857183 Msa0136070:three_prime_UTR
CCCCATGCCTTCAAGTGCCT+CGG 0.525301 1_3:+67856636 Msa0136070:five_prime_UTR
TACCGAGGCACTTGAAGGCA+TGG 0.525895 1_3:-67856638 None:intergenic
GTTACTTATTCGAGATTACC+AGG 0.540802 1_3:+67856251 Msa0136070:five_prime_UTR
TAAGGAGAATAACCAAAGGT+TGG 0.542846 1_3:+67856884 Msa0136070:CDS
AATAACCAAAGGTTGGAGAC+AGG 0.542889 1_3:+67856891 Msa0136070:CDS
TTGCCCCTTGATTTATAAGG+AGG 0.550980 1_3:+67856433 Msa0136070:five_prime_UTR
TTGGTCGAAGCACTGGTCAA+AGG 0.551358 1_3:+67856716 Msa0136070:CDS
GAAGCGAATTGCAGAGGACA+GGG 0.551739 1_3:+67857184 Msa0136070:three_prime_UTR
TTAAGACTCAAACAGAGAAG+TGG 0.554278 1_3:+67857330 Msa0136070:three_prime_UTR
CCTTATAAATCAAGGGGCAA+AGG 0.558976 1_3:-67856430 None:intergenic
GCAAAGAGATGAGAAATCAC+TGG 0.563837 1_3:+67856926 Msa0136070:CDS
AAGCGAGAACCTAGGAAGGA+TGG 0.574352 1_3:+67857215 Msa0136070:three_prime_UTR
ACCCTCCAGAAAGGAATGAA+AGG 0.576042 1_3:+67857117 Msa0136070:three_prime_UTR
TCCAGAAAGGAATGAAAGGA+AGG 0.580588 1_3:+67857121 Msa0136070:three_prime_UTR
CTGACCTCCTTATAAATCAA+GGG 0.585147 1_3:-67856437 None:intergenic
ATACTAGCCACCCTCCAGAA+AGG 0.585699 1_3:+67857108 Msa0136070:three_prime_UTR
GAAACATGATTTGTATCAAG+AGG 0.586742 1_3:+67857352 Msa0136070:three_prime_UTR
AAATCACTGGCTAAACTGGA+TGG 0.588753 1_3:+67856939 Msa0136070:CDS
GCTAAGTTCAGCATAGCACC+TGG 0.589155 1_3:+67857644 Msa0136070:three_prime_UTR
AGATTCTATTCCAAAGAATG+AGG 0.590814 1_3:+67857382 Msa0136070:three_prime_UTR
GTAGATAGTTTAGCAAAGCA+TGG 0.591110 1_3:-67857793 None:intergenic
TATTTCAACATGTGCCATGT+GGG 0.594116 1_3:+67857500 Msa0136070:three_prime_UTR
CTCAAGTGCTCAACAGACCC+AGG 0.598621 1_3:-67857662 None:intergenic
ACCTGAGAAGCGAATTGCAG+AGG 0.607322 1_3:+67857178 Msa0136070:three_prime_UTR
TGAATGGGGCAATACTGTGC+AGG 0.607456 1_3:+67856693 Msa0136070:CDS
TTCATCAAGAGTAAGGTATG+GGG 0.620262 1_3:+67857241 Msa0136070:three_prime_UTR
CAACAAGCGAGAACCTAGGA+AGG 0.622024 1_3:+67857211 Msa0136070:three_prime_UTR
GATCTCAGTGGATTCAAGAG+AGG 0.625358 1_3:+67857049 Msa0136070:three_prime_UTR
CTACTACAACATGTGGTGGG+TGG 0.632319 1_3:+67856225 Msa0136070:five_prime_UTR
AGAAAGGAATGAAAGGAAGG+AGG 0.636511 1_3:+67857124 Msa0136070:three_prime_UTR
TCATCAAGAGTAAGGTATGG+GGG 0.637056 1_3:+67857242 Msa0136070:three_prime_UTR
AATCCAACAAGCGAGAACCT+AGG 0.638185 1_3:+67857207 Msa0136070:three_prime_UTR
TAGGTTAACAGGGTTATCCA+GGG 0.638683 1_3:+67857708 Msa0136070:three_prime_UTR
ACTGGTCAAAGGGAAGCTGA+TGG 0.653810 1_3:+67856727 Msa0136070:CDS
AGGGTTATCCCTAATGACAA+CGG 0.654194 1_3:+67857727 Msa0136070:three_prime_UTR
CTAAGTTCAGCATAGCACCT+GGG 0.655614 1_3:+67857645 Msa0136070:three_prime_UTR
CCGAGGCACTTGAAGGCATG+GGG 0.656763 1_3:-67856636 None:intergenic
TGACCTCCTTATAAATCAAG+GGG 0.658780 1_3:-67856436 None:intergenic
TTATTTCAACATGTGCCATG+TGG 0.659372 1_3:+67857499 Msa0136070:three_prime_UTR
TGGGGCAATACTGTGCAGGT+TGG 0.672427 1_3:+67856697 Msa0136070:CDS
TTAGCTACTACAACATGTGG+TGG 0.675739 1_3:+67856221 Msa0136070:five_prime_UTR
AAAGTAAGGAGAATAACCAA+AGG 0.679155 1_3:+67856880 Msa0136070:CDS
GTTGTCATTAGGGATAACCC+TGG 0.682031 1_3:-67857725 None:intergenic
ATGATCCAACACCTTCTGTG+AGG 0.687855 1_3:+67857000 Msa0136070:CDS
ATGTTAGCTACTACAACATG+TGG 0.692628 1_3:+67856218 Msa0136070:five_prime_UTR
TCTCTGGAAATTGTCCCACA+TGG 0.701395 1_3:-67857514 None:intergenic
TAGCTACTACAACATGTGGT+GGG 0.716780 1_3:+67856222 Msa0136070:five_prime_UTR
TAGGGAGAAGAAGATCTCAG+TGG 0.726006 1_3:+67857037 Msa0136070:three_prime_UTR
GGAGGCAATAGCAATCACAG+AGG 0.738956 1_3:+67857269 Msa0136070:three_prime_UTR
GTTATCCCTAATGACAACGG+GGG 0.742554 1_3:+67857730 Msa0136070:three_prime_UTR
GCATTGGAAAGCATATACCG+AGG 0.758730 1_3:-67856653 None:intergenic
GGTTATCCCTAATGACAACG+GGG 0.760063 1_3:+67857729 Msa0136070:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTCTTTTATTAACATTTA+TGG - chr1_3:67856314-67856333 None:intergenic 15.0%
!! TATAAAGAAATCATGAAAAT+TGG - chr1_3:67857543-67857562 None:intergenic 15.0%
!!! TTGTCTTTTATTAACATTTA+TGG - chr1_3:67856314-67856333 None:intergenic 15.0%
!! TATAAAGAAATCATGAAAAT+TGG - chr1_3:67857543-67857562 None:intergenic 15.0%
!! AAATGTTAATAAAAGACAAC+TGG + chr1_3:67856315-67856334 Msa0136070:five_prime_UTR 20.0%
!! TACCTTTATATAAACAGTAT+TGG + chr1_3:67856474-67856493 Msa0136070:five_prime_UTR 20.0%
!! TTCCAATACTGTTTATATAA+AGG - chr1_3:67856479-67856498 None:intergenic 20.0%
!! ACATCTATAGCATATAAAAA+GGG - chr1_3:67856567-67856586 None:intergenic 20.0%
!! AACATCTATAGCATATAAAA+AGG - chr1_3:67856568-67856587 None:intergenic 20.0%
!!! CTTTACATGTTTTAGTTTTA+TGG + chr1_3:67857571-67857590 Msa0136070:three_prime_UTR 20.0%
!!! TATCTACTTTTTTTGGTATA+TGG + chr1_3:67857809-67857828 Msa0136070:three_prime_UTR 20.0%
!! TGATTAAGGTTATAAAATTG+CGG - chr1_3:67856165-67856184 None:intergenic 20.0%
!! AAATGTTAATAAAAGACAAC+TGG + chr1_3:67856315-67856334 Msa0136070:five_prime_UTR 20.0%
!! TACCTTTATATAAACAGTAT+TGG + chr1_3:67856474-67856493 Msa0136070:five_prime_UTR 20.0%
!! TTCCAATACTGTTTATATAA+AGG - chr1_3:67856479-67856498 None:intergenic 20.0%
!! ACATCTATAGCATATAAAAA+GGG - chr1_3:67856567-67856586 None:intergenic 20.0%
!! AACATCTATAGCATATAAAA+AGG - chr1_3:67856568-67856587 None:intergenic 20.0%
!!! CTTTACATGTTTTAGTTTTA+TGG + chr1_3:67857571-67857590 Msa0136070:three_prime_UTR 20.0%
!!! TATCTACTTTTTTTGGTATA+TGG + chr1_3:67857809-67857828 Msa0136070:three_prime_UTR 20.0%
! TAGGATTTGCATTATGATTA+AGG - chr1_3:67856179-67856198 None:intergenic 25.0%
! ACCCAATACAACAATATATA+CGG - chr1_3:67856281-67856300 None:intergenic 25.0%
! AAAACCAATCTCAACATTTA+TGG - chr1_3:67856406-67856425 None:intergenic 25.0%
! TTGGAAAGAAAACATCTTAA+TGG + chr1_3:67856493-67856512 Msa0136070:five_prime_UTR 25.0%
!!! TGTATGCAAACTATTTTTCT+GGG + chr1_3:67856594-67856613 Msa0136070:five_prime_UTR 25.0%
!!! TCTTTTCGCTTTATTGTATA+TGG + chr1_3:67856786-67856805 Msa0136070:intron 25.0%
! TTTATTGTATATGGATGGTT+TGG + chr1_3:67856795-67856814 Msa0136070:intron 25.0%
! TTCAAACTAAAGCCAATATT+TGG + chr1_3:67857447-67857466 Msa0136070:three_prime_UTR 25.0%
! ATAACAAGCTTACCAAATAT+TGG - chr1_3:67857462-67857481 None:intergenic 25.0%
!!! AATATTTGGTAAGCTTGTTA+TGG + chr1_3:67857461-67857480 Msa0136070:three_prime_UTR 25.0%
! TAATATCACAATGATCGATT+TGG - chr1_3:67857617-67857636 None:intergenic 25.0%
!! ATTTTTGCAAATAGGTTAAC+AGG + chr1_3:67857697-67857716 Msa0136070:three_prime_UTR 25.0%
!! TTTTTGCAAATAGGTTAACA+GGG + chr1_3:67857698-67857717 Msa0136070:three_prime_UTR 25.0%
!!! GCTAAACTATCTACTTTTTT+TGG + chr1_3:67857802-67857821 Msa0136070:three_prime_UTR 25.0%
! TAGGATTTGCATTATGATTA+AGG - chr1_3:67856179-67856198 None:intergenic 25.0%
! ACCCAATACAACAATATATA+CGG - chr1_3:67856281-67856300 None:intergenic 25.0%
! AAAACCAATCTCAACATTTA+TGG - chr1_3:67856406-67856425 None:intergenic 25.0%
! TTGGAAAGAAAACATCTTAA+TGG + chr1_3:67856493-67856512 Msa0136070:five_prime_UTR 25.0%
!!! TGTATGCAAACTATTTTTCT+GGG + chr1_3:67856594-67856613 Msa0136070:five_prime_UTR 25.0%
!!! TCTTTTCGCTTTATTGTATA+TGG + chr1_3:67856786-67856805 Msa0136070:intron 25.0%
! TTTATTGTATATGGATGGTT+TGG + chr1_3:67856795-67856814 Msa0136070:intron 25.0%
! TTCAAACTAAAGCCAATATT+TGG + chr1_3:67857447-67857466 Msa0136070:three_prime_UTR 25.0%
! ATAACAAGCTTACCAAATAT+TGG - chr1_3:67857462-67857481 None:intergenic 25.0%
!!! AATATTTGGTAAGCTTGTTA+TGG + chr1_3:67857461-67857480 Msa0136070:three_prime_UTR 25.0%
! TAATATCACAATGATCGATT+TGG - chr1_3:67857617-67857636 None:intergenic 25.0%
!! ATTTTTGCAAATAGGTTAAC+AGG + chr1_3:67857697-67857716 Msa0136070:three_prime_UTR 25.0%
!! TTTTTGCAAATAGGTTAACA+GGG + chr1_3:67857698-67857717 Msa0136070:three_prime_UTR 25.0%
!!! GCTAAACTATCTACTTTTTT+TGG + chr1_3:67857802-67857821 Msa0136070:three_prime_UTR 25.0%
TAACATCGAGAAAATGGAAA+TGG - chr1_3:67856204-67856223 None:intergenic 30.0%
TGCCGTATATATTGTTGTAT+TGG + chr1_3:67856276-67856295 Msa0136070:five_prime_UTR 30.0%
GCCGTATATATTGTTGTATT+GGG + chr1_3:67856277-67856296 Msa0136070:five_prime_UTR 30.0%
AATCTCAACATTTATGGTGA+AGG - chr1_3:67856400-67856419 None:intergenic 30.0%
TTCACCATAAATGTTGAGAT+TGG + chr1_3:67856399-67856418 Msa0136070:five_prime_UTR 30.0%
AATGGACATTGAAGATAACT+TGG + chr1_3:67856511-67856530 Msa0136070:five_prime_UTR 30.0%
!! GTGTATGCAAACTATTTTTC+TGG + chr1_3:67856593-67856612 Msa0136070:five_prime_UTR 30.0%
!! GTATGCAAACTATTTTTCTG+GGG + chr1_3:67856595-67856614 Msa0136070:five_prime_UTR 30.0%
!!! TGTTTTAACAGCATCATGAA+TGG + chr1_3:67856677-67856696 Msa0136070:CDS 30.0%
!! GTTTTAACAGCATCATGAAT+GGG + chr1_3:67856678-67856697 Msa0136070:CDS 30.0%
! TTTTAACAGCATCATGAATG+GGG + chr1_3:67856679-67856698 Msa0136070:CDS 30.0%
! TTCGCTTTATTGTATATGGA+TGG + chr1_3:67856790-67856809 Msa0136070:intron 30.0%
!! GTTTGGAATCGAAGAATTTT+GGG - chr1_3:67856843-67856862 None:intergenic 30.0%
!! TGTTTGGAATCGAAGAATTT+TGG - chr1_3:67856844-67856863 None:intergenic 30.0%
! AAAGGTATATGCTCAAAGTA+AGG + chr1_3:67856866-67856885 Msa0136070:CDS 30.0%
AAAGTAAGGAGAATAACCAA+AGG + chr1_3:67856880-67856899 Msa0136070:CDS 30.0%
! ATGGATTTTCATCAAGAGTA+AGG + chr1_3:67857234-67857253 Msa0136070:three_prime_UTR 30.0%
! TTTTCATCAAGAGTAAGGTA+TGG + chr1_3:67857239-67857258 Msa0136070:three_prime_UTR 30.0%
TTTCATCAAGAGTAAGGTAT+GGG + chr1_3:67857240-67857259 Msa0136070:three_prime_UTR 30.0%
AGAGGAAGAGACAAATTTAA+TGG + chr1_3:67857287-67857306 Msa0136070:three_prime_UTR 30.0%
TTCTCTGTTTGAGTCTTAAT+AGG - chr1_3:67857329-67857348 None:intergenic 30.0%
! GAAACATGATTTGTATCAAG+AGG + chr1_3:67857352-67857371 Msa0136070:three_prime_UTR 30.0%
AGATTCTATTCCAAAGAATG+AGG + chr1_3:67857382-67857401 Msa0136070:three_prime_UTR 30.0%
! TCATGAAAATTGGTAATCTC+TGG - chr1_3:67857533-67857552 None:intergenic 30.0%
TAACATCGAGAAAATGGAAA+TGG - chr1_3:67856204-67856223 None:intergenic 30.0%
TGCCGTATATATTGTTGTAT+TGG + chr1_3:67856276-67856295 Msa0136070:five_prime_UTR 30.0%
GCCGTATATATTGTTGTATT+GGG + chr1_3:67856277-67856296 Msa0136070:five_prime_UTR 30.0%
AATCTCAACATTTATGGTGA+AGG - chr1_3:67856400-67856419 None:intergenic 30.0%
TTCACCATAAATGTTGAGAT+TGG + chr1_3:67856399-67856418 Msa0136070:five_prime_UTR 30.0%
AATGGACATTGAAGATAACT+TGG + chr1_3:67856511-67856530 Msa0136070:five_prime_UTR 30.0%
!! GTGTATGCAAACTATTTTTC+TGG + chr1_3:67856593-67856612 Msa0136070:five_prime_UTR 30.0%
!! GTATGCAAACTATTTTTCTG+GGG + chr1_3:67856595-67856614 Msa0136070:five_prime_UTR 30.0%
!!! TGTTTTAACAGCATCATGAA+TGG + chr1_3:67856677-67856696 Msa0136070:CDS 30.0%
!! GTTTTAACAGCATCATGAAT+GGG + chr1_3:67856678-67856697 Msa0136070:CDS 30.0%
! TTTTAACAGCATCATGAATG+GGG + chr1_3:67856679-67856698 Msa0136070:CDS 30.0%
! TTCGCTTTATTGTATATGGA+TGG + chr1_3:67856790-67856809 Msa0136070:intron 30.0%
!! GTTTGGAATCGAAGAATTTT+GGG - chr1_3:67856843-67856862 None:intergenic 30.0%
!! TGTTTGGAATCGAAGAATTT+TGG - chr1_3:67856844-67856863 None:intergenic 30.0%
! AAAGGTATATGCTCAAAGTA+AGG + chr1_3:67856866-67856885 Msa0136070:CDS 30.0%
AAAGTAAGGAGAATAACCAA+AGG + chr1_3:67856880-67856899 Msa0136070:CDS 30.0%
! ATGGATTTTCATCAAGAGTA+AGG + chr1_3:67857234-67857253 Msa0136070:three_prime_UTR 30.0%
! TTTTCATCAAGAGTAAGGTA+TGG + chr1_3:67857239-67857258 Msa0136070:three_prime_UTR 30.0%
TTTCATCAAGAGTAAGGTAT+GGG + chr1_3:67857240-67857259 Msa0136070:three_prime_UTR 30.0%
AGAGGAAGAGACAAATTTAA+TGG + chr1_3:67857287-67857306 Msa0136070:three_prime_UTR 30.0%
TTCTCTGTTTGAGTCTTAAT+AGG - chr1_3:67857329-67857348 None:intergenic 30.0%
! GAAACATGATTTGTATCAAG+AGG + chr1_3:67857352-67857371 Msa0136070:three_prime_UTR 30.0%
AGATTCTATTCCAAAGAATG+AGG + chr1_3:67857382-67857401 Msa0136070:three_prime_UTR 30.0%
! TCATGAAAATTGGTAATCTC+TGG - chr1_3:67857533-67857552 None:intergenic 30.0%
AGTAGCTAACATCGAGAAAA+TGG - chr1_3:67856210-67856229 None:intergenic 35.0%
ATGTTAGCTACTACAACATG+TGG + chr1_3:67856218-67856237 Msa0136070:five_prime_UTR 35.0%
GTTACTTATTCGAGATTACC+AGG + chr1_3:67856251-67856270 Msa0136070:five_prime_UTR 35.0%
AACAATATATACGGCAATCC+TGG - chr1_3:67856272-67856291 None:intergenic 35.0%
! ACAACTGGAATTTGCTTTGA+CGG + chr1_3:67856330-67856349 Msa0136070:five_prime_UTR 35.0%
TGACCTCCTTATAAATCAAG+GGG - chr1_3:67856439-67856458 None:intergenic 35.0%
CTGACCTCCTTATAAATCAA+GGG - chr1_3:67856440-67856459 None:intergenic 35.0%
ACTGACCTCCTTATAAATCA+AGG - chr1_3:67856441-67856460 None:intergenic 35.0%
GATGCTGTTAAAACATGCAT+TGG - chr1_3:67856672-67856691 None:intergenic 35.0%
TCTTCGATTCCAAACAGAAA+AGG + chr1_3:67856848-67856867 Msa0136070:intron 35.0%
! GAGCATATACCTTTTCTGTT+TGG - chr1_3:67856860-67856879 None:intergenic 35.0%
TAAGGAGAATAACCAAAGGT+TGG + chr1_3:67856884-67856903 Msa0136070:CDS 35.0%
TTCATCAAGAGTAAGGTATG+GGG + chr1_3:67857241-67857260 Msa0136070:three_prime_UTR 35.0%
TTAAGACTCAAACAGAGAAG+TGG + chr1_3:67857330-67857349 Msa0136070:three_prime_UTR 35.0%
ATCTGATCATCCTCATTCTT+TGG - chr1_3:67857395-67857414 None:intergenic 35.0%
TTATTTCAACATGTGCCATG+TGG + chr1_3:67857499-67857518 Msa0136070:three_prime_UTR 35.0%
TATTTCAACATGTGCCATGT+GGG + chr1_3:67857500-67857519 Msa0136070:three_prime_UTR 35.0%
! GGCTGTCAATTTTTGCAAAT+AGG + chr1_3:67857689-67857708 Msa0136070:three_prime_UTR 35.0%
GTAGATAGTTTAGCAAAGCA+TGG - chr1_3:67857796-67857815 None:intergenic 35.0%
AGTAGCTAACATCGAGAAAA+TGG - chr1_3:67856210-67856229 None:intergenic 35.0%
ATGTTAGCTACTACAACATG+TGG + chr1_3:67856218-67856237 Msa0136070:five_prime_UTR 35.0%
GTTACTTATTCGAGATTACC+AGG + chr1_3:67856251-67856270 Msa0136070:five_prime_UTR 35.0%
AACAATATATACGGCAATCC+TGG - chr1_3:67856272-67856291 None:intergenic 35.0%
! ACAACTGGAATTTGCTTTGA+CGG + chr1_3:67856330-67856349 Msa0136070:five_prime_UTR 35.0%
TGACCTCCTTATAAATCAAG+GGG - chr1_3:67856439-67856458 None:intergenic 35.0%
CTGACCTCCTTATAAATCAA+GGG - chr1_3:67856440-67856459 None:intergenic 35.0%
ACTGACCTCCTTATAAATCA+AGG - chr1_3:67856441-67856460 None:intergenic 35.0%
GATGCTGTTAAAACATGCAT+TGG - chr1_3:67856672-67856691 None:intergenic 35.0%
TCTTCGATTCCAAACAGAAA+AGG + chr1_3:67856848-67856867 Msa0136070:intron 35.0%
! GAGCATATACCTTTTCTGTT+TGG - chr1_3:67856860-67856879 None:intergenic 35.0%
TAAGGAGAATAACCAAAGGT+TGG + chr1_3:67856884-67856903 Msa0136070:CDS 35.0%
TTCATCAAGAGTAAGGTATG+GGG + chr1_3:67857241-67857260 Msa0136070:three_prime_UTR 35.0%
TTAAGACTCAAACAGAGAAG+TGG + chr1_3:67857330-67857349 Msa0136070:three_prime_UTR 35.0%
ATCTGATCATCCTCATTCTT+TGG - chr1_3:67857395-67857414 None:intergenic 35.0%
TTATTTCAACATGTGCCATG+TGG + chr1_3:67857499-67857518 Msa0136070:three_prime_UTR 35.0%
TATTTCAACATGTGCCATGT+GGG + chr1_3:67857500-67857519 Msa0136070:three_prime_UTR 35.0%
! GGCTGTCAATTTTTGCAAAT+AGG + chr1_3:67857689-67857708 Msa0136070:three_prime_UTR 35.0%
GTAGATAGTTTAGCAAAGCA+TGG - chr1_3:67857796-67857815 None:intergenic 35.0%
CGAGAAAATGGAAATGGTGT+AGG - chr1_3:67856198-67856217 None:intergenic 40.0%
TTAGCTACTACAACATGTGG+TGG + chr1_3:67856221-67856240 Msa0136070:five_prime_UTR 40.0%
TAGCTACTACAACATGTGGT+GGG + chr1_3:67856222-67856241 Msa0136070:five_prime_UTR 40.0%
CCTTATAAATCAAGGGGCAA+AGG - chr1_3:67856433-67856452 None:intergenic 40.0%
CCTTTGCCCCTTGATTTATA+AGG + chr1_3:67856430-67856449 Msa0136070:five_prime_UTR 40.0%
TTGCCCCTTGATTTATAAGG+AGG + chr1_3:67856433-67856452 Msa0136070:five_prime_UTR 40.0%
!!! AAACTATTTTTCTGGGGCGT+GGG + chr1_3:67856601-67856620 Msa0136070:five_prime_UTR 40.0%
AATAACCAAAGGTTGGAGAC+AGG + chr1_3:67856891-67856910 Msa0136070:CDS 40.0%
GCAAAGAGATGAGAAATCAC+TGG + chr1_3:67856926-67856945 Msa0136070:CDS 40.0%
! TGAGAAATCACTGGCTAAAC+TGG + chr1_3:67856935-67856954 Msa0136070:CDS 40.0%
! AAATCACTGGCTAAACTGGA+TGG + chr1_3:67856939-67856958 Msa0136070:CDS 40.0%
!! GAAGAGACAGTTTTCGAGAA+AGG + chr1_3:67856973-67856992 Msa0136070:CDS 40.0%
ATCTTCTTCTCCCTAAATGC+TGG - chr1_3:67857032-67857051 None:intergenic 40.0%
TCCTTTCATTCCTTTCTGGA+GGG - chr1_3:67857121-67857140 None:intergenic 40.0%
TTCCTTTCATTCCTTTCTGG+AGG - chr1_3:67857122-67857141 None:intergenic 40.0%
TCCAGAAAGGAATGAAAGGA+AGG + chr1_3:67857121-67857140 Msa0136070:three_prime_UTR 40.0%
TCCTTCCTTTCATTCCTTTC+TGG - chr1_3:67857125-67857144 None:intergenic 40.0%
AGAAAGGAATGAAAGGAAGG+AGG + chr1_3:67857124-67857143 Msa0136070:three_prime_UTR 40.0%
TCAGGTCTATCTAGATGGTT+AGG - chr1_3:67857164-67857183 None:intergenic 40.0%
GATGAAAATCCATCCTTCCT+AGG - chr1_3:67857227-67857246 None:intergenic 40.0%
TCATCAAGAGTAAGGTATGG+GGG + chr1_3:67857242-67857261 Msa0136070:three_prime_UTR 40.0%
ATAGGTTAACAGGGTTATCC+AGG + chr1_3:67857707-67857726 Msa0136070:three_prime_UTR 40.0%
TAGGTTAACAGGGTTATCCA+GGG + chr1_3:67857708-67857727 Msa0136070:three_prime_UTR 40.0%
AGGGTTATCCCTAATGACAA+CGG + chr1_3:67857727-67857746 Msa0136070:three_prime_UTR 40.0%
CGAGAAAATGGAAATGGTGT+AGG - chr1_3:67856198-67856217 None:intergenic 40.0%
TTAGCTACTACAACATGTGG+TGG + chr1_3:67856221-67856240 Msa0136070:five_prime_UTR 40.0%
TAGCTACTACAACATGTGGT+GGG + chr1_3:67856222-67856241 Msa0136070:five_prime_UTR 40.0%
CCTTATAAATCAAGGGGCAA+AGG - chr1_3:67856433-67856452 None:intergenic 40.0%
CCTTTGCCCCTTGATTTATA+AGG + chr1_3:67856430-67856449 Msa0136070:five_prime_UTR 40.0%
TTGCCCCTTGATTTATAAGG+AGG + chr1_3:67856433-67856452 Msa0136070:five_prime_UTR 40.0%
!!! AAACTATTTTTCTGGGGCGT+GGG + chr1_3:67856601-67856620 Msa0136070:five_prime_UTR 40.0%
AATAACCAAAGGTTGGAGAC+AGG + chr1_3:67856891-67856910 Msa0136070:CDS 40.0%
GCAAAGAGATGAGAAATCAC+TGG + chr1_3:67856926-67856945 Msa0136070:CDS 40.0%
! TGAGAAATCACTGGCTAAAC+TGG + chr1_3:67856935-67856954 Msa0136070:CDS 40.0%
! AAATCACTGGCTAAACTGGA+TGG + chr1_3:67856939-67856958 Msa0136070:CDS 40.0%
!! GAAGAGACAGTTTTCGAGAA+AGG + chr1_3:67856973-67856992 Msa0136070:CDS 40.0%
ATCTTCTTCTCCCTAAATGC+TGG - chr1_3:67857032-67857051 None:intergenic 40.0%
TCCTTTCATTCCTTTCTGGA+GGG - chr1_3:67857121-67857140 None:intergenic 40.0%
TTCCTTTCATTCCTTTCTGG+AGG - chr1_3:67857122-67857141 None:intergenic 40.0%
TCCAGAAAGGAATGAAAGGA+AGG + chr1_3:67857121-67857140 Msa0136070:three_prime_UTR 40.0%
TCCTTCCTTTCATTCCTTTC+TGG - chr1_3:67857125-67857144 None:intergenic 40.0%
AGAAAGGAATGAAAGGAAGG+AGG + chr1_3:67857124-67857143 Msa0136070:three_prime_UTR 40.0%
TCAGGTCTATCTAGATGGTT+AGG - chr1_3:67857164-67857183 None:intergenic 40.0%
GATGAAAATCCATCCTTCCT+AGG - chr1_3:67857227-67857246 None:intergenic 40.0%
TCATCAAGAGTAAGGTATGG+GGG + chr1_3:67857242-67857261 Msa0136070:three_prime_UTR 40.0%
ATAGGTTAACAGGGTTATCC+AGG + chr1_3:67857707-67857726 Msa0136070:three_prime_UTR 40.0%
TAGGTTAACAGGGTTATCCA+GGG + chr1_3:67857708-67857727 Msa0136070:three_prime_UTR 40.0%
AGGGTTATCCCTAATGACAA+CGG + chr1_3:67857727-67857746 Msa0136070:three_prime_UTR 40.0%
!!! CAAACTATTTTTCTGGGGCG+TGG + chr1_3:67856600-67856619 Msa0136070:five_prime_UTR 45.0%
! GCATTGGAAAGCATATACCG+AGG - chr1_3:67856656-67856675 None:intergenic 45.0%
TTTGACCTGTCTCCAACCTT+TGG - chr1_3:67856899-67856918 None:intergenic 45.0%
ATGATCCAACACCTTCTGTG+AGG + chr1_3:67857000-67857019 Msa0136070:CDS 45.0%
!! CTTTTCCTCACAGAAGGTGT+TGG - chr1_3:67857008-67857027 None:intergenic 45.0%
CAACACCTTCTGTGAGGAAA+AGG + chr1_3:67857006-67857025 Msa0136070:exon 45.0%
TGAGGAAAAGGCCAGCATTT+AGG + chr1_3:67857018-67857037 Msa0136070:exon 45.0%
GAGGAAAAGGCCAGCATTTA+GGG + chr1_3:67857019-67857038 Msa0136070:exon 45.0%
TAGGGAGAAGAAGATCTCAG+TGG + chr1_3:67857037-67857056 Msa0136070:three_prime_UTR 45.0%
! GATCTCAGTGGATTCAAGAG+AGG + chr1_3:67857049-67857068 Msa0136070:three_prime_UTR 45.0%
! TTTCATTCCTTTCTGGAGGG+TGG - chr1_3:67857118-67857137 None:intergenic 45.0%
ACCCTCCAGAAAGGAATGAA+AGG + chr1_3:67857117-67857136 Msa0136070:three_prime_UTR 45.0%
GCTTCTCAGGTCTATCTAGA+TGG - chr1_3:67857169-67857188 None:intergenic 45.0%
AATCCAACAAGCGAGAACCT+AGG + chr1_3:67857207-67857226 Msa0136070:three_prime_UTR 45.0%
GGATGATCAGATTGCAAAGC+TGG + chr1_3:67857403-67857422 Msa0136070:three_prime_UTR 45.0%
! TCTCTGGAAATTGTCCCACA+TGG - chr1_3:67857517-67857536 None:intergenic 45.0%
CTAAGTTCAGCATAGCACCT+GGG + chr1_3:67857645-67857664 Msa0136070:three_prime_UTR 45.0%
GTTGTCATTAGGGATAACCC+TGG - chr1_3:67857728-67857747 None:intergenic 45.0%
GGGTTATCCCTAATGACAAC+GGG + chr1_3:67857728-67857747 Msa0136070:three_prime_UTR 45.0%
GGTTATCCCTAATGACAACG+GGG + chr1_3:67857729-67857748 Msa0136070:three_prime_UTR 45.0%
GTTATCCCTAATGACAACGG+GGG + chr1_3:67857730-67857749 Msa0136070:three_prime_UTR 45.0%
ATGATCCCCCGTTGTCATTA+GGG - chr1_3:67857738-67857757 None:intergenic 45.0%
AATGATCCCCCGTTGTCATT+AGG - chr1_3:67857739-67857758 None:intergenic 45.0%
!!! CAAACTATTTTTCTGGGGCG+TGG + chr1_3:67856600-67856619 Msa0136070:five_prime_UTR 45.0%
! GCATTGGAAAGCATATACCG+AGG - chr1_3:67856656-67856675 None:intergenic 45.0%
TTTGACCTGTCTCCAACCTT+TGG - chr1_3:67856899-67856918 None:intergenic 45.0%
ATGATCCAACACCTTCTGTG+AGG + chr1_3:67857000-67857019 Msa0136070:CDS 45.0%
!! CTTTTCCTCACAGAAGGTGT+TGG - chr1_3:67857008-67857027 None:intergenic 45.0%
CAACACCTTCTGTGAGGAAA+AGG + chr1_3:67857006-67857025 Msa0136070:exon 45.0%
TGAGGAAAAGGCCAGCATTT+AGG + chr1_3:67857018-67857037 Msa0136070:exon 45.0%
GAGGAAAAGGCCAGCATTTA+GGG + chr1_3:67857019-67857038 Msa0136070:exon 45.0%
TAGGGAGAAGAAGATCTCAG+TGG + chr1_3:67857037-67857056 Msa0136070:three_prime_UTR 45.0%
! GATCTCAGTGGATTCAAGAG+AGG + chr1_3:67857049-67857068 Msa0136070:three_prime_UTR 45.0%
! TTTCATTCCTTTCTGGAGGG+TGG - chr1_3:67857118-67857137 None:intergenic 45.0%
ACCCTCCAGAAAGGAATGAA+AGG + chr1_3:67857117-67857136 Msa0136070:three_prime_UTR 45.0%
GCTTCTCAGGTCTATCTAGA+TGG - chr1_3:67857169-67857188 None:intergenic 45.0%
AATCCAACAAGCGAGAACCT+AGG + chr1_3:67857207-67857226 Msa0136070:three_prime_UTR 45.0%
GGATGATCAGATTGCAAAGC+TGG + chr1_3:67857403-67857422 Msa0136070:three_prime_UTR 45.0%
! TCTCTGGAAATTGTCCCACA+TGG - chr1_3:67857517-67857536 None:intergenic 45.0%
CTAAGTTCAGCATAGCACCT+GGG + chr1_3:67857645-67857664 Msa0136070:three_prime_UTR 45.0%
GTTGTCATTAGGGATAACCC+TGG - chr1_3:67857728-67857747 None:intergenic 45.0%
GGGTTATCCCTAATGACAAC+GGG + chr1_3:67857728-67857747 Msa0136070:three_prime_UTR 45.0%
GGTTATCCCTAATGACAACG+GGG + chr1_3:67857729-67857748 Msa0136070:three_prime_UTR 45.0%
GTTATCCCTAATGACAACGG+GGG + chr1_3:67857730-67857749 Msa0136070:three_prime_UTR 45.0%
ATGATCCCCCGTTGTCATTA+GGG - chr1_3:67857738-67857757 None:intergenic 45.0%
AATGATCCCCCGTTGTCATT+AGG - chr1_3:67857739-67857758 None:intergenic 45.0%
!! TATATATCAATATAAAATTA+AGG - chr1_3:67856760-67856779 None:intergenic 5.0%
!! TATATATCAATATAAAATTA+AGG - chr1_3:67856760-67856779 None:intergenic 5.0%
! CTACTACAACATGTGGTGGG+TGG + chr1_3:67856225-67856244 Msa0136070:five_prime_UTR 50.0%
! GCATATACCGAGGCACTTGA+AGG - chr1_3:67856646-67856665 None:intergenic 50.0%
TGAATGGGGCAATACTGTGC+AGG + chr1_3:67856693-67856712 Msa0136070:CDS 50.0%
!! TTGGTCGAAGCACTGGTCAA+AGG + chr1_3:67856716-67856735 Msa0136070:CDS 50.0%
!! TGGTCGAAGCACTGGTCAAA+GGG + chr1_3:67856717-67856736 Msa0136070:CDS 50.0%
ACTGGTCAAAGGGAAGCTGA+TGG + chr1_3:67856727-67856746 Msa0136070:CDS 50.0%
TTTACTGTCACTGTCGCAGC+TGG - chr1_3:67857080-67857099 None:intergenic 50.0%
! TTTCTGGAGGGTGGCTAGTA+TGG - chr1_3:67857109-67857128 None:intergenic 50.0%
ATACTAGCCACCCTCCAGAA+AGG + chr1_3:67857108-67857127 Msa0136070:three_prime_UTR 50.0%
ACCTGAGAAGCGAATTGCAG+AGG + chr1_3:67857178-67857197 Msa0136070:three_prime_UTR 50.0%
TCCTCTGCAATTCGCTTCTC+AGG - chr1_3:67857182-67857201 None:intergenic 50.0%
AGAAGCGAATTGCAGAGGAC+AGG + chr1_3:67857183-67857202 Msa0136070:three_prime_UTR 50.0%
GAAGCGAATTGCAGAGGACA+GGG + chr1_3:67857184-67857203 Msa0136070:three_prime_UTR 50.0%
CTTCCTAGGTTCTCGCTTGT+TGG - chr1_3:67857213-67857232 None:intergenic 50.0%
CAACAAGCGAGAACCTAGGA+AGG + chr1_3:67857211-67857230 Msa0136070:three_prime_UTR 50.0%
AAGCGAGAACCTAGGAAGGA+TGG + chr1_3:67857215-67857234 Msa0136070:three_prime_UTR 50.0%
AGAGTAAGGTATGGGGGAAG+TGG + chr1_3:67857248-67857267 Msa0136070:three_prime_UTR 50.0%
GGAGGCAATAGCAATCACAG+AGG + chr1_3:67857269-67857288 Msa0136070:three_prime_UTR 50.0%
GCTAAGTTCAGCATAGCACC+TGG + chr1_3:67857644-67857663 Msa0136070:three_prime_UTR 50.0%
TCTGTTGAGCACTTGAGCTC+TGG + chr1_3:67857668-67857687 Msa0136070:three_prime_UTR 50.0%
! CTACTACAACATGTGGTGGG+TGG + chr1_3:67856225-67856244 Msa0136070:five_prime_UTR 50.0%
! GCATATACCGAGGCACTTGA+AGG - chr1_3:67856646-67856665 None:intergenic 50.0%
TGAATGGGGCAATACTGTGC+AGG + chr1_3:67856693-67856712 Msa0136070:CDS 50.0%
!! TTGGTCGAAGCACTGGTCAA+AGG + chr1_3:67856716-67856735 Msa0136070:CDS 50.0%
!! TGGTCGAAGCACTGGTCAAA+GGG + chr1_3:67856717-67856736 Msa0136070:CDS 50.0%
ACTGGTCAAAGGGAAGCTGA+TGG + chr1_3:67856727-67856746 Msa0136070:CDS 50.0%
TTTACTGTCACTGTCGCAGC+TGG - chr1_3:67857080-67857099 None:intergenic 50.0%
! TTTCTGGAGGGTGGCTAGTA+TGG - chr1_3:67857109-67857128 None:intergenic 50.0%
ATACTAGCCACCCTCCAGAA+AGG + chr1_3:67857108-67857127 Msa0136070:three_prime_UTR 50.0%
ACCTGAGAAGCGAATTGCAG+AGG + chr1_3:67857178-67857197 Msa0136070:three_prime_UTR 50.0%
TCCTCTGCAATTCGCTTCTC+AGG - chr1_3:67857182-67857201 None:intergenic 50.0%
AGAAGCGAATTGCAGAGGAC+AGG + chr1_3:67857183-67857202 Msa0136070:three_prime_UTR 50.0%
GAAGCGAATTGCAGAGGACA+GGG + chr1_3:67857184-67857203 Msa0136070:three_prime_UTR 50.0%
CTTCCTAGGTTCTCGCTTGT+TGG - chr1_3:67857213-67857232 None:intergenic 50.0%
CAACAAGCGAGAACCTAGGA+AGG + chr1_3:67857211-67857230 Msa0136070:three_prime_UTR 50.0%
AAGCGAGAACCTAGGAAGGA+TGG + chr1_3:67857215-67857234 Msa0136070:three_prime_UTR 50.0%
AGAGTAAGGTATGGGGGAAG+TGG + chr1_3:67857248-67857267 Msa0136070:three_prime_UTR 50.0%
GGAGGCAATAGCAATCACAG+AGG + chr1_3:67857269-67857288 Msa0136070:three_prime_UTR 50.0%
GCTAAGTTCAGCATAGCACC+TGG + chr1_3:67857644-67857663 Msa0136070:three_prime_UTR 50.0%
TCTGTTGAGCACTTGAGCTC+TGG + chr1_3:67857668-67857687 Msa0136070:three_prime_UTR 50.0%
! ACCGAGGCACTTGAAGGCAT+GGG - chr1_3:67856640-67856659 None:intergenic 55.0%
! TACCGAGGCACTTGAAGGCA+TGG - chr1_3:67856641-67856660 None:intergenic 55.0%
TGGGGCAATACTGTGCAGGT+TGG + chr1_3:67856697-67856716 Msa0136070:CDS 55.0%
!!! GCTGGCCTTTTCCTCACAGA+AGG - chr1_3:67857014-67857033 None:intergenic 55.0%
GTAAGGTATGGGGGAAGTGG+AGG + chr1_3:67857251-67857270 Msa0136070:three_prime_UTR 55.0%
CTCAAGTGCTCAACAGACCC+AGG - chr1_3:67857665-67857684 None:intergenic 55.0%
! ACCGAGGCACTTGAAGGCAT+GGG - chr1_3:67856640-67856659 None:intergenic 55.0%
! TACCGAGGCACTTGAAGGCA+TGG - chr1_3:67856641-67856660 None:intergenic 55.0%
TGGGGCAATACTGTGCAGGT+TGG + chr1_3:67856697-67856716 Msa0136070:CDS 55.0%
!!! GCTGGCCTTTTCCTCACAGA+AGG - chr1_3:67857014-67857033 None:intergenic 55.0%
GTAAGGTATGGGGGAAGTGG+AGG + chr1_3:67857251-67857270 Msa0136070:three_prime_UTR 55.0%
CTCAAGTGCTCAACAGACCC+AGG - chr1_3:67857665-67857684 None:intergenic 55.0%
! CCGAGGCACTTGAAGGCATG+GGG - chr1_3:67856639-67856658 None:intergenic 60.0%
CCCCATGCCTTCAAGTGCCT+CGG + chr1_3:67856636-67856655 Msa0136070:five_prime_UTR 60.0%
!! GTGCAGGTTGGTCGAAGCAC+TGG + chr1_3:67856709-67856728 Msa0136070:CDS 60.0%
! CCGAGGCACTTGAAGGCATG+GGG - chr1_3:67856639-67856658 None:intergenic 60.0%
CCCCATGCCTTCAAGTGCCT+CGG + chr1_3:67856636-67856655 Msa0136070:five_prime_UTR 60.0%
!! GTGCAGGTTGGTCGAAGCAC+TGG + chr1_3:67856709-67856728 Msa0136070:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 67856164 67857876 67856164 ID=Msa0136070;Name=Msa0136070
chr1_3 mRNA 67856164 67857876 67856164 ID=Msa0136070-mRNA-1;Parent=Msa0136070;Name=Msa0136070-mRNA-1;_AED=0.00;_eAED=0.00;_QI=498|1|1|1|1|1|2|856|80
chr1_3 exon 67856164 67856748 67856164 ID=Msa0136070-mRNA-1:exon:23336;Parent=Msa0136070-mRNA-1
chr1_3 exon 67856865 67857876 67856865 ID=Msa0136070-mRNA-1:exon:23337;Parent=Msa0136070-mRNA-1
chr1_3 five_prime_UTR 67856164 67856661 67856164 ID=Msa0136070-mRNA-1:five_prime_utr;Parent=Msa0136070-mRNA-1
chr1_3 CDS 67856662 67856748 67856662 ID=Msa0136070-mRNA-1:cds;Parent=Msa0136070-mRNA-1
chr1_3 CDS 67856865 67857020 67856865 ID=Msa0136070-mRNA-1:cds;Parent=Msa0136070-mRNA-1
chr1_3 three_prime_UTR 67857021 67857876 67857021 ID=Msa0136070-mRNA-1:three_prime_utr;Parent=Msa0136070-mRNA-1
Gene Sequence

>Msa0136070

ATGCTTTCCAATGCATGTTTTAACAGCATCATGAATGGGGCAATACTGTGCAGGTTGGTCGAAGCACTGGTCAAAGGGAAGCTGATGAAAAGGTATATGCTCAAAGTAAGGAGAATAACCAAAGGTTGGAGACAGGTCAAAGTAGAGAGCAAAGAGATGAGAAATCACTGGCTAAACTGGATGGTAATTTTCAGAGAAGAGACAGTTTTCGAGAAAGGAAAGATGATCCAACACCTTCTGTGA

Protein sequence

>Msa0136070

MLSNACFNSIMNGAILCRLVEALVKGKLMKRYMLKVRRITKGWRQVKVESKEMRNHWLNWMVIFREETVFEKGKMIQHLL*