Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693500 | XP_003607905.1 | 97.101 | 621 | 18 | 0 | 1 | 621 | 1 | 621 | 0.0 | 1251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693500 | sp|Q88BD4|ALGC_PSESM | 30.479 | 397 | 243 | 12 | 128 | 519 | 53 | 421 | 3.24e-39 | 153 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693500 | G7JJZ2 | 97.101 | 621 | 18 | 0 | 1 | 621 | 1 | 621 | 0.0 | 1251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0693500 | 0.857627 | 1.435087e-62 | -8.615850e-47 |
| Msa0005690 | Msa0693500 | 0.810453 | 1.144161e-50 | -8.615850e-47 |
| Msa0009560 | Msa0693500 | 0.809326 | 1.999886e-50 | -8.615850e-47 |
| Msa0012380 | Msa0693500 | 0.867895 | 9.762869e-66 | -8.615850e-47 |
| Msa0020320 | Msa0693500 | 0.832278 | 1.035603e-55 | -8.615850e-47 |
| Msa0024900 | Msa0693500 | 0.829299 | 5.564945e-55 | -8.615850e-47 |
| Msa0037270 | Msa0693500 | 0.813468 | 2.520677e-51 | -8.615850e-47 |
| Msa0044180 | Msa0693500 | 0.831286 | 1.819855e-55 | -8.615850e-47 |
| Msa0064550 | Msa0693500 | 0.832824 | 7.581542e-56 | -8.615850e-47 |
| Msa0072390 | Msa0693500 | 0.844517 | 7.199755e-59 | -8.615850e-47 |
| Msa0072830 | Msa0693500 | 0.856250 | 3.653028e-62 | -8.615850e-47 |
| Msa0072860 | Msa0693500 | 0.852402 | 4.726975e-61 | -8.615850e-47 |
| Msa0080810 | Msa0693500 | 0.845302 | 4.421360e-59 | -8.615850e-47 |
| Msa0081120 | Msa0693500 | 0.829526 | 4.899183e-55 | -8.615850e-47 |
| Msa0091470 | Msa0693500 | 0.828543 | 8.478315e-55 | -8.615850e-47 |
| Msa0096510 | Msa0693500 | 0.811350 | 7.315814e-51 | -8.615850e-47 |
| Msa0108070 | Msa0693500 | 0.824506 | 7.777584e-54 | -8.615850e-47 |
| Msa0114700 | Msa0693500 | 0.855329 | 6.787883e-62 | -8.615850e-47 |
| Msa0116470 | Msa0693500 | 0.830502 | 2.832678e-55 | -8.615850e-47 |
| Msa0116510 | Msa0693500 | 0.847626 | 1.026675e-59 | -8.615850e-47 |
| Msa0120320 | Msa0693500 | 0.841485 | 4.618747e-58 | -8.615850e-47 |
| Msa0604880 | Msa0693500 | 0.864927 | 8.545560e-65 | -8.615850e-47 |
| Msa0605250 | Msa0693500 | 0.826140 | 3.194421e-54 | -8.615850e-47 |
| Msa0608780 | Msa0693500 | 0.847121 | 1.412472e-59 | -8.615850e-47 |
| Msa0610780 | Msa0693500 | 0.947150 | 1.176030e-105 | -8.615850e-47 |
| Msa0610810 | Msa0693500 | 0.936896 | 8.324984e-98 | -8.615850e-47 |
| Msa0614980 | Msa0693500 | 0.808153 | 3.561427e-50 | -8.615850e-47 |
| Msa0615430 | Msa0693500 | 0.828179 | 1.038218e-54 | -8.615850e-47 |
| Msa0619390 | Msa0693500 | 0.847507 | 1.107298e-59 | -8.615850e-47 |
| Msa0621780 | Msa0693500 | 0.801685 | 8.011962e-49 | -8.615850e-47 |
| Msa0622250 | Msa0693500 | 0.850039 | 2.197173e-60 | -8.615850e-47 |
| Msa0624040 | Msa0693500 | 0.816742 | 4.728298e-52 | -8.615850e-47 |
| Msa0624930 | Msa0693500 | -0.811847 | 5.705079e-51 | -8.615850e-47 |
| Msa0627050 | Msa0693500 | 0.871725 | 5.489570e-67 | -8.615850e-47 |
| Msa0644630 | Msa0693500 | 0.827079 | 1.906541e-54 | -8.615850e-47 |
| Msa0645410 | Msa0693500 | 0.838151 | 3.408848e-57 | -8.615850e-47 |
| Msa0646190 | Msa0693500 | 0.866709 | 2.338148e-65 | -8.615850e-47 |
| Msa0646340 | Msa0693500 | 0.856532 | 3.018774e-62 | -8.615850e-47 |
| Msa0649250 | Msa0693500 | 0.846803 | 1.725997e-59 | -8.615850e-47 |
| Msa0651310 | Msa0693500 | 0.963834 | 1.426490e-122 | -8.615850e-47 |
| Msa0654880 | Msa0693500 | 0.841153 | 5.647335e-58 | -8.615850e-47 |
| Msa0675010 | Msa0693500 | 0.840557 | 8.095931e-58 | -8.615850e-47 |
| Msa0679780 | Msa0693500 | 0.807868 | 4.096084e-50 | -8.615850e-47 |
| Msa0681210 | Msa0693500 | 0.840536 | 8.195027e-58 | -8.615850e-47 |
| Msa0685000 | Msa0693500 | 0.839345 | 1.675155e-57 | -8.615850e-47 |
| Msa0685890 | Msa0693500 | 0.828779 | 7.437889e-55 | -8.615850e-47 |
| Msa0693400 | Msa0693500 | 0.856435 | 3.222811e-62 | -8.615850e-47 |
| Msa0693500 | Msa0698480 | 0.822372 | 2.454209e-53 | -8.615850e-47 |
| Msa0693500 | Msa0698650 | 0.842152 | 3.078073e-58 | -8.615850e-47 |
| Msa0693500 | Msa0702310 | 0.803557 | 3.293019e-49 | -8.615850e-47 |
| Msa0693500 | Msa0702360 | 0.814329 | 1.628750e-51 | -8.615850e-47 |
| Msa0693500 | Msa0702560 | 0.819016 | 1.449062e-52 | -8.615850e-47 |
| Msa0693500 | Msa0702620 | 0.803163 | 3.974249e-49 | -8.615850e-47 |
| Msa0693500 | Msa0705810 | 0.867526 | 1.282395e-65 | -8.615850e-47 |
| Msa0693500 | Msa0712670 | 0.806393 | 8.406358e-50 | -8.615850e-47 |
| Msa0693500 | Msa0715510 | -0.807801 | 4.231900e-50 | -8.615850e-47 |
| Msa0693500 | Msa0738410 | -0.821973 | 3.036623e-53 | -8.615850e-47 |
| Msa0693500 | Msa0742090 | 0.849807 | 2.550322e-60 | -8.615850e-47 |
| Msa0693500 | Msa0744690 | 0.810687 | 1.018189e-50 | -8.615850e-47 |
| Msa0693500 | Msa0748330 | 0.842373 | 2.690260e-58 | -8.615850e-47 |
| Msa0693500 | Msa0748980 | 0.821297 | 4.352385e-53 | -8.615850e-47 |
| Msa0693500 | Msa0749150 | 0.831029 | 2.104237e-55 | -8.615850e-47 |
| Msa0693500 | Msa0786100 | 0.826044 | 3.365633e-54 | -8.615850e-47 |
| Msa0693500 | Msa0788160 | 0.807535 | 4.820433e-50 | -8.615850e-47 |
| Msa0693500 | Msa0790640 | 0.842047 | 3.281766e-58 | -8.615850e-47 |
| Msa0693500 | Msa0792880 | 0.811024 | 8.608834e-51 | -8.615850e-47 |
| Msa0693500 | Msa0793100 | 0.823313 | 1.481329e-53 | -8.615850e-47 |
| Msa0693500 | Msa0795710 | 0.802550 | 5.320240e-49 | -8.615850e-47 |
| Msa0693500 | Msa0803530 | 0.847495 | 1.115301e-59 | -8.615850e-47 |
| Msa0693500 | Msa0812970 | 0.813527 | 2.446354e-51 | -8.615850e-47 |
| Msa0693500 | Msa0823310 | 0.832843 | 7.499293e-56 | -8.615850e-47 |
| Msa0693500 | Msa0825520 | 0.826787 | 2.239614e-54 | -8.615850e-47 |
| Msa0693500 | Msa0828900 | 0.814056 | 1.870741e-51 | -8.615850e-47 |
| Msa0693500 | Msa0833030 | 0.802073 | 6.669893e-49 | -8.615850e-47 |
| Msa0693500 | Msa0848720 | 0.802057 | 6.718852e-49 | -8.615850e-47 |
| Msa0693500 | Msa0864730 | 0.835272 | 1.848619e-56 | -8.615850e-47 |
| Msa0693500 | Msa0864750 | 0.834412 | 3.042232e-56 | -8.615850e-47 |
| Msa0693500 | Msa0871470 | 0.819804 | 9.582341e-53 | -8.615850e-47 |
| Msa0693500 | Msa0879650 | 0.860583 | 1.866499e-63 | -8.615850e-47 |
| Msa0693500 | Msa0884840 | 0.810673 | 1.025641e-50 | -8.615850e-47 |
| Msa0693500 | Msa0887100 | 0.903751 | 2.508030e-79 | -8.615850e-47 |
| Msa0693500 | Msa0888900 | 0.801210 | 1.002505e-48 | -8.615850e-47 |
| Msa0693500 | Msa0904630 | 0.811715 | 6.096035e-51 | -8.615850e-47 |
| Msa0693500 | Msa0909720 | 0.843206 | 1.616248e-58 | -8.615850e-47 |
| Msa0693500 | Msa0912110 | 0.826714 | 2.331361e-54 | -8.615850e-47 |
| Msa0693500 | Msa0913140 | 0.871073 | 9.019040e-67 | -8.615850e-47 |
| Msa0693500 | Msa0928940 | 0.822925 | 1.825099e-53 | -8.615850e-47 |
| Msa0693500 | Msa0928970 | 0.815370 | 9.572273e-52 | -8.615850e-47 |
| Msa0693500 | Msa0930210 | -0.827564 | 1.459068e-54 | -8.615850e-47 |
| Msa0693500 | Msa0936650 | 0.827986 | 1.155359e-54 | -8.615850e-47 |
| Msa0693500 | Msa0950470 | 0.873553 | 1.344942e-67 | -8.615850e-47 |
| Msa0693500 | Msa0950570 | 0.884034 | 2.704877e-71 | -8.615850e-47 |
| Msa0693500 | Msa0956910 | 0.815766 | 7.813558e-52 | -8.615850e-47 |
| Msa0693500 | Msa0968960 | 0.813375 | 2.642732e-51 | -8.615850e-47 |
| Msa0693500 | Msa0973890 | 0.837092 | 6.373192e-57 | -8.615850e-47 |
| Msa0693500 | Msa0980980 | 0.827715 | 1.342431e-54 | -8.615850e-47 |
| Msa0693500 | Msa0984000 | 0.855315 | 6.849601e-62 | -8.615850e-47 |
| Msa0693500 | Msa0992190 | 0.810247 | 1.267421e-50 | -8.615850e-47 |
| Msa0693500 | Msa1004720 | 0.805130 | 1.548637e-49 | -8.615850e-47 |
| Msa0693500 | Msa1014700 | 0.816778 | 4.641213e-52 | -8.615850e-47 |
| Msa0693500 | Msa1031530 | 0.820576 | 6.375781e-53 | -8.615850e-47 |
| Msa0693500 | Msa1036020 | -0.815389 | 9.480640e-52 | -8.615850e-47 |
| Msa0693500 | Msa1036250 | 0.806610 | 7.564948e-50 | -8.615850e-47 |
| Msa0693500 | Msa1043020 | 0.817399 | 3.364290e-52 | -8.615850e-47 |
| Msa0693500 | Msa1070630 | 0.803209 | 3.887729e-49 | -8.615850e-47 |
| Msa0693500 | Msa1076280 | -0.815445 | 9.213607e-52 | -8.615850e-47 |
| Msa0693500 | Msa1076520 | 0.819544 | 1.098778e-52 | -8.615850e-47 |
| Msa0693500 | Msa1078300 | -0.812753 | 3.618029e-51 | -8.615850e-47 |
| Msa0693500 | Msa1078600 | 0.826113 | 3.241517e-54 | -8.615850e-47 |
| Msa0693500 | Msa1078770 | 0.829041 | 6.426395e-55 | -8.615850e-47 |
| Msa0693500 | Msa1082150 | 0.832166 | 1.103729e-55 | -8.615850e-47 |
| Msa0693500 | Msa1083130 | -0.824648 | 7.202578e-54 | -8.615850e-47 |
| Msa0693500 | Msa1096510 | 0.813939 | 1.985936e-51 | -8.615850e-47 |
| Msa0693500 | Msa1096520 | 0.820353 | 7.173126e-53 | -8.615850e-47 |
| Msa0693500 | Msa1096570 | 0.831973 | 1.232099e-55 | -8.615850e-47 |
| Msa0693500 | Msa1101300 | 0.809660 | 1.695153e-50 | -8.615850e-47 |
| Msa0693500 | Msa1122720 | 0.817350 | 3.451781e-52 | -8.615850e-47 |
| Msa0693500 | Msa1127910 | -0.803997 | 2.668768e-49 | -8.615850e-47 |
| Msa0693500 | Msa1143860 | 0.815811 | 7.635075e-52 | -8.615850e-47 |
| Msa0693500 | Msa1144730 | 0.853760 | 1.930579e-61 | -8.615850e-47 |
| Msa0693500 | Msa1152290 | -0.800020 | 1.753311e-48 | -8.615850e-47 |
| Msa0693500 | Msa1157030 | 0.810084 | 1.374167e-50 | -8.615850e-47 |
| Msa0693500 | Msa1158450 | 0.812259 | 4.638389e-51 | -8.615850e-47 |
| Msa0693500 | Msa1169600 | 0.822198 | 2.693559e-53 | -8.615850e-47 |
| Msa0693500 | Msa1173380 | 0.858830 | 6.293771e-63 | -8.615850e-47 |
| Msa0693500 | Msa1181510 | 0.816825 | 4.529355e-52 | -8.615850e-47 |
| Msa0693500 | Msa1181730 | 0.819781 | 9.696836e-53 | -8.615850e-47 |
| Msa0693500 | Msa1182800 | 0.843773 | 1.140095e-58 | -8.615850e-47 |
| Msa0693500 | Msa1182830 | 0.804536 | 2.060595e-49 | -8.615850e-47 |
| Msa0693500 | Msa1184010 | 0.840002 | 1.130173e-57 | -8.615850e-47 |
| Msa0693500 | Msa1191960 | 0.806438 | 8.227283e-50 | -8.615850e-47 |
| Msa0693500 | Msa1193400 | 0.803664 | 3.129677e-49 | -8.615850e-47 |
| Msa0693500 | Msa1193430 | 0.811727 | 6.058187e-51 | -8.615850e-47 |
| Msa0693500 | Msa1209160 | 0.840201 | 1.003087e-57 | -8.615850e-47 |
| Msa0693500 | Msa1219060 | 0.839306 | 1.715022e-57 | -8.615850e-47 |
| Msa0693500 | Msa1224820 | 0.820770 | 5.755927e-53 | -8.615850e-47 |
| Msa0693500 | Msa1225140 | 0.814230 | 1.712960e-51 | -8.615850e-47 |
| Msa0693500 | Msa1228350 | 0.828904 | 6.935725e-55 | -8.615850e-47 |
| Msa0693500 | Msa1228460 | 0.833890 | 4.113032e-56 | -8.615850e-47 |
| Msa0693500 | Msa1236860 | 0.883434 | 4.502000e-71 | -8.615850e-47 |
| Msa0693500 | Msa1239900 | 0.805279 | 1.441271e-49 | -8.615850e-47 |
| Msa0693500 | Msa1243730 | 0.812978 | 3.229027e-51 | -8.615850e-47 |
| Msa0693500 | Msa1244220 | 0.801351 | 9.381817e-49 | -8.615850e-47 |
| Msa0693500 | Msa1249410 | 0.817538 | 3.130448e-52 | -8.615850e-47 |
| Msa0693500 | Msa1255020 | 0.884982 | 1.203484e-71 | -8.615850e-47 |
| Msa0693500 | Msa1257100 | 0.848528 | 5.787354e-60 | -8.615850e-47 |
| Msa0693500 | Msa1272950 | 0.811117 | 8.218548e-51 | -8.615850e-47 |
| Msa0693500 | Msa1288970 | 0.805199 | 1.497693e-49 | -8.615850e-47 |
| Msa0693500 | Msa1295470 | 0.883383 | 4.699095e-71 | -8.615850e-47 |
| Msa0693500 | Msa1297220 | 0.826897 | 2.108367e-54 | -8.615850e-47 |
| Msa0693500 | Msa1303760 | 0.833968 | 3.931095e-56 | -8.615850e-47 |
| Msa0693500 | Msa1303820 | 0.841848 | 3.704768e-58 | -8.615850e-47 |
| Msa0693500 | Msa1317240 | 0.888740 | 4.513854e-73 | -8.615850e-47 |
| Msa0693500 | Msa1323260 | 0.820769 | 5.756899e-53 | -8.615850e-47 |
| Msa0693500 | Msa1332690 | 0.819964 | 8.806621e-53 | -8.615850e-47 |
| Msa0693500 | Msa1338590 | 0.809653 | 1.701635e-50 | -8.615850e-47 |
| Msa0693500 | Msa1343450 | 0.836080 | 1.153633e-56 | -8.615850e-47 |
| Msa0693500 | Msa1349810 | 0.867711 | 1.119157e-65 | -8.615850e-47 |
| Msa0693500 | Msa1358340 | 0.835476 | 1.641340e-56 | -8.615850e-47 |
| Msa0693500 | Msa1359890 | 0.864903 | 8.694361e-65 | -8.615850e-47 |
| Msa0693500 | Msa1363070 | 0.826712 | 2.333887e-54 | -8.615850e-47 |
| Msa0693500 | Msa1369180 | 0.857284 | 1.813047e-62 | -8.615850e-47 |
| Msa0693500 | Msa1373390 | 0.809008 | 2.339996e-50 | -8.615850e-47 |
| Msa0693500 | Msa1376010 | 0.814664 | 1.373246e-51 | -8.615850e-47 |
| Msa0693500 | Msa1384620 | 0.825110 | 5.604398e-54 | -8.615850e-47 |
| Msa0693500 | Msa1387520 | 0.819234 | 1.292886e-52 | -8.615850e-47 |
| Msa0693500 | Msa1404690 | 0.840314 | 9.370004e-58 | -8.615850e-47 |
| Msa0693500 | Msa1405380 | 0.834179 | 3.481163e-56 | -8.615850e-47 |
| Msa0693500 | Msa1406020 | 0.829060 | 6.358879e-55 | -8.615850e-47 |
| Msa0693500 | Msa1406990 | 0.848182 | 7.211837e-60 | -8.615850e-47 |
| Msa0693500 | Msa1412500 | -0.809382 | 1.944846e-50 | -8.615850e-47 |
| Msa0693500 | Msa1418840 | 0.810276 | 1.249015e-50 | -8.615850e-47 |
| Msa0693500 | Msa1421540 | -0.808092 | 3.671062e-50 | -8.615850e-47 |
| Msa0693500 | Msa1427600 | 0.807524 | 4.847259e-50 | -8.615850e-47 |
| Msa0693500 | Msa1431240 | 0.810438 | 1.152807e-50 | -8.615850e-47 |
| Msa0693500 | Msa1436660 | 0.813058 | 3.101368e-51 | -8.615850e-47 |
| Msa0693500 | Msa1443550 | 0.827542 | 1.477415e-54 | -8.615850e-47 |
| Msa0693500 | Msa1450630 | 0.806979 | 6.324046e-50 | -8.615850e-47 |
| Msa0693500 | Msa1450780 | 0.840224 | 9.889489e-58 | -8.615850e-47 |
| Msa0693500 | Msa1453180 | 0.801110 | 1.050698e-48 | -8.615850e-47 |
| Msa0693500 | Msa1453540 | 0.805398 | 1.360751e-49 | -8.615850e-47 |
| Msa0693500 | Msa1456620 | 0.851370 | 9.276371e-61 | -8.615850e-47 |
| Msa0693500 | Msa1460530 | 0.822836 | 1.913911e-53 | -8.615850e-47 |
| Msa0128110 | Msa0693500 | 0.800936 | 1.140768e-48 | -8.615850e-47 |
| Msa0135330 | Msa0693500 | -0.814015 | 1.910732e-51 | -8.615850e-47 |
| Msa0143280 | Msa0693500 | 0.803155 | 3.989075e-49 | -8.615850e-47 |
| Msa0147540 | Msa0693500 | 0.815166 | 1.062524e-51 | -8.615850e-47 |
| Msa0154220 | Msa0693500 | 0.813695 | 2.247721e-51 | -8.615850e-47 |
| Msa0154240 | Msa0693500 | 0.846871 | 1.654503e-59 | -8.615850e-47 |
| Msa0154270 | Msa0693500 | 0.834105 | 3.631911e-56 | -8.615850e-47 |
| Msa0163530 | Msa0693500 | 0.819823 | 9.488038e-53 | -8.615850e-47 |
| Msa0163960 | Msa0693500 | 0.839014 | 2.040625e-57 | -8.615850e-47 |
| Msa0173370 | Msa0693500 | 0.832531 | 8.965077e-56 | -8.615850e-47 |
| Msa0180100 | Msa0693500 | 0.806557 | 7.763198e-50 | -8.615850e-47 |
| Msa0184510 | Msa0693500 | 0.828831 | 7.223602e-55 | -8.615850e-47 |
| Msa0187980 | Msa0693500 | 0.864950 | 8.403847e-65 | -8.615850e-47 |
| Msa0195140 | Msa0693500 | 0.803127 | 4.042861e-49 | -8.615850e-47 |
| Msa0197030 | Msa0693500 | 0.833775 | 4.392521e-56 | -8.615850e-47 |
| Msa0199740 | Msa0693500 | 0.813610 | 2.346531e-51 | -8.615850e-47 |
| Msa0202740 | Msa0693500 | 0.813590 | 2.370050e-51 | -8.615850e-47 |
| Msa0367590 | Msa0693500 | 0.816329 | 5.850820e-52 | -8.615850e-47 |
| Msa0369100 | Msa0693500 | 0.801294 | 9.636481e-49 | -8.615850e-47 |
| Msa0387970 | Msa0693500 | 0.822353 | 2.478828e-53 | -8.615850e-47 |
| Msa0388200 | Msa0693500 | 0.820688 | 6.008282e-53 | -8.615850e-47 |
| Msa0392050 | Msa0693500 | 0.853301 | 2.616625e-61 | -8.615850e-47 |
| Msa0392540 | Msa0693500 | 0.826504 | 2.616305e-54 | -8.615850e-47 |
| Msa0404060 | Msa0693500 | 0.833995 | 3.871677e-56 | -8.615850e-47 |
| Msa0404070 | Msa0693500 | 0.851148 | 1.071780e-60 | -8.615850e-47 |
| Msa0415200 | Msa0693500 | 0.816797 | 4.594465e-52 | -8.615850e-47 |
| Msa0416540 | Msa0693500 | 0.807398 | 5.154353e-50 | -8.615850e-47 |
| Msa0425320 | Msa0693500 | 0.836979 | 6.812299e-57 | -8.615850e-47 |
| Msa0428330 | Msa0693500 | 0.819234 | 1.292886e-52 | -8.615850e-47 |
| Msa0433670 | Msa0693500 | 0.825659 | 4.155384e-54 | -8.615850e-47 |
| Msa0437550 | Msa0693500 | 0.823850 | 1.109078e-53 | -8.615850e-47 |
| Msa0440310 | Msa0693500 | 0.811599 | 6.457921e-51 | -8.615850e-47 |
| Msa0469950 | Msa0693500 | 0.853911 | 1.747430e-61 | -8.615850e-47 |
| Msa0471760 | Msa0693500 | 0.838290 | 3.140093e-57 | -8.615850e-47 |
| Msa0476960 | Msa0693500 | -0.818391 | 2.009134e-52 | -8.615850e-47 |
| Msa0477550 | Msa0693500 | 0.800698 | 1.275344e-48 | -8.615850e-47 |
| Msa0238860 | Msa0693500 | 0.836342 | 9.901560e-57 | -8.615850e-47 |
| Msa0239610 | Msa0693500 | 0.804109 | 2.528893e-49 | -8.615850e-47 |
| Msa0253160 | Msa0693500 | 0.826429 | 2.726836e-54 | -8.615850e-47 |
| Msa0276590 | Msa0693500 | 0.823054 | 1.702337e-53 | -8.615850e-47 |
| Msa0291940 | Msa0693500 | 0.825786 | 3.875977e-54 | -8.615850e-47 |
| Msa0303920 | Msa0693500 | -0.805660 | 1.199135e-49 | -8.615850e-47 |
| Msa0306160 | Msa0693500 | 0.819174 | 1.333715e-52 | -8.615850e-47 |
| Msa0316610 | Msa0693500 | 0.842065 | 3.246946e-58 | -8.615850e-47 |
| Msa0343370 | Msa0693500 | 0.826077 | 3.306132e-54 | -8.615850e-47 |
| Msa0344680 | Msa0693500 | 0.855583 | 5.725244e-62 | -8.615850e-47 |
| Msa0485210 | Msa0693500 | 0.803573 | 3.268865e-49 | -8.615850e-47 |
| Msa0508780 | Msa0693500 | 0.820225 | 7.676037e-53 | -8.615850e-47 |
| Msa0515460 | Msa0693500 | 0.840011 | 1.124058e-57 | -8.615850e-47 |
| Msa0518480 | Msa0693500 | 0.809000 | 2.348683e-50 | -8.615850e-47 |
| Msa0521570 | Msa0693500 | 0.822013 | 2.971915e-53 | -8.615850e-47 |
| Msa0529360 | Msa0693500 | -0.815637 | 8.346553e-52 | -8.615850e-47 |
| Msa0530340 | Msa0693500 | 0.855217 | 7.318031e-62 | -8.615850e-47 |
| Msa0545230 | Msa0693500 | 0.829409 | 5.231142e-55 | -8.615850e-47 |
| Msa0546080 | Msa0693500 | 0.820917 | 5.323649e-53 | -8.615850e-47 |
| Msa0548210 | Msa0693500 | 0.832376 | 9.793885e-56 | -8.615850e-47 |
| Msa0549110 | Msa0693500 | 0.811116 | 8.224779e-51 | -8.615850e-47 |
| Msa0549540 | Msa0693500 | 0.862000 | 6.905930e-64 | -8.615850e-47 |
| Msa0556070 | Msa0693500 | 0.873447 | 1.460181e-67 | -8.615850e-47 |
| Msa0561420 | Msa0693500 | 0.827965 | 1.168531e-54 | -8.615850e-47 |
| Msa0565760 | Msa0693500 | 0.808699 | 2.723735e-50 | -8.615850e-47 |
| Msa0565860 | Msa0693500 | 0.820729 | 5.881714e-53 | -8.615850e-47 |
| Msa0569230 | Msa0693500 | 0.803460 | 3.449595e-49 | -8.615850e-47 |
| Msa0570680 | Msa0693500 | 0.928951 | 1.393914e-92 | -8.615850e-47 |
| Msa0575380 | Msa0693500 | -0.815056 | 1.124230e-51 | -8.615850e-47 |
| Msa0577050 | Msa0693500 | 0.866551 | 2.624502e-65 | -8.615850e-47 |
| Msa0579170 | Msa0693500 | 0.825542 | 4.430216e-54 | -8.615850e-47 |
| Msa0579230 | Msa0693500 | 0.830846 | 2.332881e-55 | -8.615850e-47 |
| Msa0584280 | Msa0693500 | 0.802646 | 5.082002e-49 | -8.615850e-47 |
| Msa0587250 | Msa0693500 | 0.844453 | 7.491047e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693500 | MtrunA17_Chr4g0043871 | 97.101 | 621 | 18 | 0 | 1 | 621 | 1 | 621 | 0.0 | 1251 |
| Msa0693500 | MtrunA17_Chr1g0199691 | 41.935 | 589 | 294 | 14 | 41 | 615 | 59 | 613 | 9.40e-135 | 407 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693500 | AT1G70820.1 | 73.948 | 618 | 151 | 5 | 1 | 615 | 1 | 611 | 0.0 | 946 |
| Msa0693500 | AT1G70820.2 | 74.707 | 597 | 141 | 5 | 1 | 594 | 1 | 590 | 0.0 | 922 |
| Msa0693500 | AT5G17530.5 | 43.643 | 527 | 256 | 10 | 73 | 588 | 20 | 516 | 2.62e-133 | 401 |
| Msa0693500 | AT5G17530.1 | 43.633 | 534 | 258 | 11 | 68 | 588 | 52 | 555 | 9.91e-133 | 401 |
| Msa0693500 | AT5G17530.7 | 43.633 | 534 | 258 | 11 | 68 | 588 | 52 | 555 | 9.91e-133 | 401 |
| Msa0693500 | AT5G17530.2 | 43.633 | 534 | 258 | 11 | 68 | 588 | 52 | 555 | 9.91e-133 | 401 |
| Msa0693500 | AT5G17530.6 | 43.633 | 534 | 258 | 11 | 68 | 588 | 52 | 555 | 9.91e-133 | 401 |
| Msa0693500 | AT5G17530.3 | 43.633 | 534 | 258 | 11 | 68 | 588 | 85 | 588 | 4.58e-132 | 400 |
| Msa0693500 | AT5G17530.4 | 44.466 | 524 | 248 | 11 | 68 | 578 | 85 | 578 | 5.13e-131 | 399 |
Find 160 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGATAAGTTTGTTGAAAA+TGG | 0.159254 | 4_4:+62421874 | Msa0693500:CDS |
| AACTCCACTTAAGGGATTTC+AGG | 0.200454 | 4_4:+62419410 | Msa0693500:CDS |
| TCTCCTTGATGATTTCTCTT+AGG | 0.241263 | 4_4:-62419362 | None:intergenic |
| GTACAGGAAGGGAGGCTTAA+AGG | 0.243975 | 4_4:+62421247 | Msa0693500:intron |
| ATGAGTTTGTCACCGTTTAT+TGG | 0.279165 | 4_4:-62420435 | None:intergenic |
| GATATCCTGTTGAGAATGTT+AGG | 0.282778 | 4_4:+62418892 | Msa0693500:CDS |
| GAGGCAATATCAGAGAGTTT+TGG | 0.300966 | 4_4:+62418834 | Msa0693500:CDS |
| AGTAATAATCCCAAGATATA+AGG | 0.313843 | 4_4:+62422054 | Msa0693500:three_prime_UTR |
| CTTGGGATTATTACTAGTTT+AGG | 0.316416 | 4_4:-62422046 | None:intergenic |
| CTCCTTTGTCAATGACATTT+CGG | 0.316509 | 4_4:-62420590 | None:intergenic |
| AACCTTGCATATTGTAAATC+AGG | 0.317494 | 4_4:-62421905 | None:intergenic |
| TGCAAGTTCACAGCAATGTT+TGG | 0.318198 | 4_4:-62421653 | None:intergenic |
| ATATTGGATTTGTAAGGTTA+TGG | 0.320920 | 4_4:+62418432 | Msa0693500:five_prime_UTR |
| TATTCATATTCCTTATATCT+TGG | 0.323647 | 4_4:-62422064 | None:intergenic |
| CATATTGTAAATCAGGCTAA+TGG | 0.323981 | 4_4:-62421898 | None:intergenic |
| AATGGTTTAGAGAAGGAAAA+AGG | 0.330346 | 4_4:+62418870 | Msa0693500:CDS |
| GCATTATGAAACTCCACTTA+AGG | 0.337071 | 4_4:+62419401 | Msa0693500:CDS |
| TGTCTATGATGCTTCGATAA+TGG | 0.339955 | 4_4:+62419061 | Msa0693500:CDS |
| TGCTTTAGCATTTCGAGGTT+CGG | 0.347623 | 4_4:-62420959 | None:intergenic |
| TTAGAAAATTCAGCTGATCT+TGG | 0.348367 | 4_4:+62420357 | Msa0693500:CDS |
| TGGTTGTATGGTGTTCGATA+TGG | 0.364157 | 4_4:+62418989 | Msa0693500:CDS |
| CATTATGAAACTCCACTTAA+GGG | 0.365922 | 4_4:+62419402 | Msa0693500:CDS |
| ATTCATATTCCTTATATCTT+GGG | 0.377218 | 4_4:-62422063 | None:intergenic |
| CTTATTACAGATTTATTGAA+TGG | 0.379212 | 4_4:-62418660 | None:intergenic |
| CCTGTTATATTGGATTTGTA+AGG | 0.382963 | 4_4:+62418426 | Msa0693500:five_prime_UTR |
| GTGAATGCTGGAAACGGTTC+AGG | 0.385357 | 4_4:+62420192 | Msa0693500:CDS |
| CCTTACAAATCCAATATAAC+AGG | 0.393617 | 4_4:-62418426 | None:intergenic |
| AGAAGATGAGAAACCAAGTT+TGG | 0.394739 | 4_4:-62418634 | None:intergenic |
| GTAATAAGTGTGAAATGTTA+TGG | 0.397911 | 4_4:+62418675 | Msa0693500:CDS |
| ATGAAGAACTGGACAAGATT+AGG | 0.401197 | 4_4:+62418727 | Msa0693500:CDS |
| GCAAGTTCACAGCAATGTTT+GGG | 0.402997 | 4_4:-62421652 | None:intergenic |
| GAAAACCATTTCCTTGATGA+TGG | 0.403160 | 4_4:+62420681 | Msa0693500:CDS |
| AGGCCTTAACATTTAGCTAT+AGG | 0.405868 | 4_4:-62422026 | None:intergenic |
| TTCAAACCATTACGCGTGTA+AGG | 0.408128 | 4_4:-62419186 | None:intergenic |
| TAGACTCATGTGGTGATTGT+TGG | 0.408525 | 4_4:+62421278 | Msa0693500:CDS |
| TTTGGGGAGTGGGTTATCAA+TGG | 0.408829 | 4_4:+62418852 | Msa0693500:CDS |
| TACAGGAAGGGAGGCTTAAA+GGG | 0.417177 | 4_4:+62421248 | Msa0693500:intron |
| CATGGCTGCCATTGTATTGA+AGG | 0.421469 | 4_4:+62420464 | Msa0693500:CDS |
| TTGAGTGTTGCAGTGTTTGC+CGG | 0.424973 | 4_4:+62418954 | Msa0693500:CDS |
| TGTGCGAGCATCGGTTACTA+TGG | 0.426358 | 4_4:-62420502 | None:intergenic |
| TCTTGCCCGTGCTGGTTGTA+TGG | 0.435743 | 4_4:+62418977 | Msa0693500:CDS |
| TCGGGATTGGGAATGTGATT+AGG | 0.440559 | 4_4:-62420297 | None:intergenic |
| CAGAATGGTTCGGATGTTAG+AGG | 0.441225 | 4_4:+62418756 | Msa0693500:CDS |
| CATTTGCCTTACACGCGTAA+TGG | 0.443439 | 4_4:+62419180 | Msa0693500:CDS |
| AAGCTTGGTGCAGATACCTT+TGG | 0.445592 | 4_4:+62420243 | Msa0693500:CDS |
| ATATTGTAAATCAGGCTAAT+GGG | 0.446537 | 4_4:-62421897 | None:intergenic |
| ACTAACCATCATCAAGGAAA+TGG | 0.455559 | 4_4:-62420686 | None:intergenic |
| CTAAGTTCTACTGATTCATA+AGG | 0.458468 | 4_4:-62420922 | None:intergenic |
| ACACACTGTCATTCTTTGCT+AGG | 0.461028 | 4_4:+62418591 | Msa0693500:CDS |
| TCGGTTACTATGGTTGATCC+TGG | 0.462108 | 4_4:-62420492 | None:intergenic |
| CTGCCTATAGCTAAATGTTA+AGG | 0.466168 | 4_4:+62422023 | Msa0693500:three_prime_UTR |
| CAAACCTGAAATCCCTTAAG+TGG | 0.467227 | 4_4:-62419414 | None:intergenic |
| TCACCTTATCTCTTAAAACT+TGG | 0.470522 | 4_4:+62418470 | Msa0693500:five_prime_UTR |
| GGACGCGACCCTCGAGTCAC+AGG | 0.474920 | 4_4:+62418924 | Msa0693500:CDS |
| GACACCCTAACATTCTCAAC+AGG | 0.478256 | 4_4:-62418897 | None:intergenic |
| GTTGCATTGGAAGGCGAGAA+AGG | 0.478585 | 4_4:+62418780 | Msa0693500:CDS |
| TCGAAAATATGCAAATAGAT+TGG | 0.479157 | 4_4:+62419272 | Msa0693500:CDS |
| AACAAAGGGAATCCAATAAA+CGG | 0.482733 | 4_4:+62420423 | Msa0693500:CDS |
| TGATTAGGAAACATGCCATC+AGG | 0.483044 | 4_4:-62420282 | None:intergenic |
| AGACTCATGTGGTGATTGTT+GGG | 0.486205 | 4_4:+62421279 | Msa0693500:CDS |
| CATCTTATGATTGAAACATC+TGG | 0.487363 | 4_4:+62420642 | Msa0693500:CDS |
| CCTCGAAATGCTAAAGCAAA+AGG | 0.489207 | 4_4:+62420964 | Msa0693500:CDS |
| CCTCCACGGCAGGAGGAGTA+AGG | 0.491033 | 4_4:-62418815 | None:intergenic |
| TTTGCCGGTCTTGCCCGTGC+TGG | 0.491242 | 4_4:+62418969 | Msa0693500:CDS |
| GGTGAAAATTATAATTGAAA+TGG | 0.492081 | 4_4:+62420837 | Msa0693500:CDS |
| TCTGATATTGCCTCCACGGC+AGG | 0.494254 | 4_4:-62418825 | None:intergenic |
| ACTAAGTTTATAACTGATAG+AGG | 0.494389 | 4_4:+62420537 | Msa0693500:CDS |
| GGTTGTATGGTGTTCGATAT+GGG | 0.494885 | 4_4:+62418990 | Msa0693500:CDS |
| CTTATGAATCAGTAGAACTT+AGG | 0.496088 | 4_4:+62420923 | Msa0693500:CDS |
| TATCAATTTGAGCAATGTCT+AGG | 0.498567 | 4_4:-62421858 | None:intergenic |
| ACAACCAGCACGGGCAAGAC+CGG | 0.498948 | 4_4:-62418973 | None:intergenic |
| CTTAACATTTAGCTATAGGC+AGG | 0.499510 | 4_4:-62422022 | None:intergenic |
| TAGGAGGCTTCAGAATGGTT+CGG | 0.500282 | 4_4:+62418746 | Msa0693500:CDS |
| GTGATTGTTGGGTGAGTGAA+GGG | 0.507653 | 4_4:+62421290 | Msa0693500:CDS |
| TCAAGGAGGTTGCTTGTCAA+TGG | 0.508461 | 4_4:+62421685 | Msa0693500:CDS |
| TGTTGACATATGAGACAAGA+TGG | 0.511191 | 4_4:-62422089 | None:intergenic |
| TGAACATGGACAACATGGTT+GGG | 0.514106 | 4_4:+62421604 | Msa0693500:CDS |
| AGTAGTGGTGGATGAAGAAC+TGG | 0.516808 | 4_4:+62418716 | Msa0693500:CDS |
| ATGAACATGGACAACATGGT+TGG | 0.518204 | 4_4:+62421603 | Msa0693500:CDS |
| AAGCTTGGTGGATCAGATGA+AGG | 0.519389 | 4_4:+62420868 | Msa0693500:CDS |
| CTACAGATAATAGTGAATGC+TGG | 0.522007 | 4_4:+62420180 | Msa0693500:intron |
| ATCGAAGCATCATAGACAAA+TGG | 0.522028 | 4_4:-62419056 | None:intergenic |
| ATATTGATGCTCAAATGTAC+AGG | 0.524473 | 4_4:+62421344 | Msa0693500:CDS |
| TGACAAACTCATTGCTCTCA+TGG | 0.524707 | 4_4:+62420446 | Msa0693500:CDS |
| ATATAATGAAGGGGCCTACA+TGG | 0.525333 | 4_4:+62420813 | Msa0693500:intron |
| TTTGAGCATCAATATGAGCC+GGG | 0.527926 | 4_4:-62421336 | None:intergenic |
| GGTGATTGTTGGGTGAGTGA+AGG | 0.531696 | 4_4:+62421289 | Msa0693500:CDS |
| GAGAATGTTAGGGTGTCTCT+TGG | 0.540583 | 4_4:+62418903 | Msa0693500:CDS |
| ATTTGAGCATCAATATGAGC+CGG | 0.540769 | 4_4:-62421337 | None:intergenic |
| ATAATAGTGAATGCTGGAAA+CGG | 0.546802 | 4_4:+62420186 | Msa0693500:CDS |
| TTTGAGATGCAGAGAGCCAA+AGG | 0.548288 | 4_4:-62420259 | None:intergenic |
| ATTGTATTGAAGGAAAATCC+AGG | 0.558299 | 4_4:+62420474 | Msa0693500:CDS |
| CACCATTGTTTATACCGCGT+TGG | 0.558868 | 4_4:+62420564 | Msa0693500:CDS |
| AGCCTGATTTACAATATGCA+AGG | 0.560226 | 4_4:+62421903 | Msa0693500:exon |
| AACAATGAACATGGACAACA+TGG | 0.562336 | 4_4:+62421599 | Msa0693500:CDS |
| TAACTAACTAACCATCATCA+AGG | 0.564044 | 4_4:-62420692 | None:intergenic |
| GGTGGATCAGATGAAGGGAT+TGG | 0.566186 | 4_4:+62420874 | Msa0693500:CDS |
| CGACCTTACTCCTCCTGCCG+TGG | 0.566388 | 4_4:+62418812 | Msa0693500:CDS |
| GGTTATCAATGGTTTAGAGA+AGG | 0.568136 | 4_4:+62418863 | Msa0693500:CDS |
| TACGATGTCTTAGACAAGCT+TGG | 0.568721 | 4_4:+62420228 | Msa0693500:CDS |
| ATATCCTGTTGAGAATGTTA+GGG | 0.574389 | 4_4:+62418893 | Msa0693500:CDS |
| GGATGTTAGAGGAGTTGCAT+TGG | 0.576031 | 4_4:+62418767 | Msa0693500:CDS |
| GCGGCGTGGTTGATAACAAA+GGG | 0.576808 | 4_4:+62420409 | Msa0693500:CDS |
| ATTTAGACCCTGTGACTCGA+GGG | 0.578792 | 4_4:-62418932 | None:intergenic |
| CGACATGCTTGTGCGAGCAT+CGG | 0.582293 | 4_4:-62420511 | None:intergenic |
| CAAAGGAGTTCAGCTTAACA+AGG | 0.582640 | 4_4:+62420605 | Msa0693500:CDS |
| CCTTACTCCTCCTGCCGTGG+AGG | 0.582653 | 4_4:+62418815 | Msa0693500:CDS |
| AACTTGCAATCATCTGCTCA+AGG | 0.583771 | 4_4:+62421668 | Msa0693500:CDS |
| GTTAGAGGAGTTGCATTGGA+AGG | 0.585950 | 4_4:+62418771 | Msa0693500:CDS |
| TCTCTGCATCTCAAACCTGA+TGG | 0.591260 | 4_4:+62420267 | Msa0693500:CDS |
| AGTGGAGTTTCATAATGCAA+AGG | 0.592830 | 4_4:-62419396 | None:intergenic |
| GAACACCATACAACCAGCAC+GGG | 0.593242 | 4_4:-62418982 | None:intergenic |
| ATGTTGCTGTACAGGAAGGG+AGG | 0.593434 | 4_4:+62421239 | Msa0693500:intron |
| GATATTGCCTCCACGGCAGG+AGG | 0.597822 | 4_4:-62418822 | None:intergenic |
| AAGATTAGGAGGCTTCAGAA+TGG | 0.602089 | 4_4:+62418741 | Msa0693500:CDS |
| ATGGTAAGAATGAAGCTTGG+TGG | 0.602153 | 4_4:+62420856 | Msa0693500:CDS |
| GAAATGGTAAGAATGAAGCT+TGG | 0.602393 | 4_4:+62420853 | Msa0693500:CDS |
| ACTCTCTGATATTGCCTCCA+CGG | 0.605057 | 4_4:-62418829 | None:intergenic |
| TCCCGAGGACAAAATTGCCA+TGG | 0.605099 | 4_4:+62420314 | Msa0693500:CDS |
| GGAAGGGAGGCTTAAAGGGT+GGG | 0.606977 | 4_4:+62421252 | Msa0693500:intron |
| GACGCGACCCTCGAGTCACA+GGG | 0.611240 | 4_4:+62418925 | Msa0693500:CDS |
| GATACCGATGTTGACAGAAG+CGG | 0.611913 | 4_4:+62420390 | Msa0693500:CDS |
| AAGAACTGGACAAGATTAGG+AGG | 0.612386 | 4_4:+62418730 | Msa0693500:CDS |
| AATTTAGACCCTGTGACTCG+AGG | 0.613432 | 4_4:-62418933 | None:intergenic |
| AAATGCTAAAGCAAAAGGAT+CGG | 0.620165 | 4_4:+62420969 | Msa0693500:CDS |
| TGCTAAAGCAAAAGGATCGG+AGG | 0.622933 | 4_4:+62420972 | Msa0693500:CDS |
| GGAGTTCAGCTTAACAAGGA+GGG | 0.622995 | 4_4:+62420609 | Msa0693500:CDS |
| GAAGCATCATAGACAAATGG+AGG | 0.623916 | 4_4:-62419053 | None:intergenic |
| AGGAAGGGAGGCTTAAAGGG+TGG | 0.627499 | 4_4:+62421251 | Msa0693500:intron |
| AGCGGCGTGGTTGATAACAA+AGG | 0.627508 | 4_4:+62420408 | Msa0693500:CDS |
| AGCTTGGTGGATCAGATGAA+GGG | 0.629122 | 4_4:+62420869 | Msa0693500:CDS |
| AATGCTGGAAACGGTTCAGG+AGG | 0.629528 | 4_4:+62420195 | Msa0693500:CDS |
| TACCGAAATGTCATTGACAA+AGG | 0.633169 | 4_4:+62420588 | Msa0693500:CDS |
| CATGAAACAAGCTGGTGTGG+TGG | 0.638242 | 4_4:-62419018 | None:intergenic |
| ATGATTGAAACATCTGGTCA+CGG | 0.638606 | 4_4:+62420648 | Msa0693500:CDS |
| TGCAAAGTATGATGAAGTAG+TGG | 0.641435 | 4_4:+62418701 | Msa0693500:CDS |
| AACATGGTTGGGTACACATG+AGG | 0.643450 | 4_4:+62421615 | Msa0693500:CDS |
| AAAGTATCAAACAATGAACA+TGG | 0.643511 | 4_4:+62421590 | Msa0693500:CDS |
| GCACCTAAGAGAAATCATCA+AGG | 0.645515 | 4_4:+62419359 | Msa0693500:CDS |
| AACCAACGCGGTATAAACAA+TGG | 0.648208 | 4_4:-62420566 | None:intergenic |
| CGAACACCATACAACCAGCA+CGG | 0.651126 | 4_4:-62418983 | None:intergenic |
| AATGTGCTCATGAAACAAGC+TGG | 0.662216 | 4_4:-62419026 | None:intergenic |
| GGGTGGGAGTTAGACTCATG+TGG | 0.663424 | 4_4:+62421268 | Msa0693500:CDS |
| GGGTGTCATTTGTATCAACA+AGG | 0.663565 | 4_4:-62421315 | None:intergenic |
| TAATTCAAATAAAGCAAGAG+CGG | 0.666600 | 4_4:+62418496 | Msa0693500:five_prime_UTR |
| GCGGCAAACAAAATCAACAA+TGG | 0.668178 | 4_4:+62418515 | Msa0693500:exon |
| AGGAGTTCAGCTTAACAAGG+AGG | 0.668823 | 4_4:+62420608 | Msa0693500:CDS |
| CGATGTTGACAGAAGCGGCG+TGG | 0.670101 | 4_4:+62420395 | Msa0693500:CDS |
| TTGAGCATCAATATGAGCCG+GGG | 0.674597 | 4_4:-62421335 | None:intergenic |
| GCTCATGAAACAAGCTGGTG+TGG | 0.679906 | 4_4:-62419021 | None:intergenic |
| TAATGAAGGGGCCTACATGG+TGG | 0.680927 | 4_4:+62420816 | Msa0693500:intron |
| TGTTGATACAAATGACACCC+CGG | 0.681662 | 4_4:+62421318 | Msa0693500:CDS |
| AAAGTATGATGAAGTAGTGG+TGG | 0.692926 | 4_4:+62418704 | Msa0693500:CDS |
| TAATCACATTCCCAATCCCG+AGG | 0.693986 | 4_4:+62420299 | Msa0693500:CDS |
| AGAAGAAGTATGTGACAAAG+CGG | 0.700368 | 4_4:+62419248 | Msa0693500:CDS |
| AAGTTTATAACTGATAGAGG+AGG | 0.701127 | 4_4:+62420540 | Msa0693500:CDS |
| TTGCAATCATCTGCTCAAGG+AGG | 0.704569 | 4_4:+62421671 | Msa0693500:CDS |
| TGACATTTCGGTAACCAACG+CGG | 0.705467 | 4_4:-62420578 | None:intergenic |
| CACGCCGCTTCTGTCAACAT+CGG | 0.714678 | 4_4:-62420394 | None:intergenic |
| AACATTTCGAAACTACATCG+AGG | 0.755001 | 4_4:+62421002 | Msa0693500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATCTTAATATATTGAATA+GGG | - | chr4_4:62419519-62419538 | None:intergenic | 15.0% |
| !! | AAGATCTTAATATATTGAAT+AGG | - | chr4_4:62419520-62419539 | None:intergenic | 15.0% |
| !! | ATTCAATATATTAAGATCTT+AGG | + | chr4_4:62419520-62419539 | Msa0693500:intron | 15.0% |
| !!! | AAATTTTCAAAGAAAATAGA+GGG | - | chr4_4:62420127-62420146 | None:intergenic | 15.0% |
| !!! | TAAATTTTCAAAGAAAATAG+AGG | - | chr4_4:62420128-62420147 | None:intergenic | 15.0% |
| !! | TTTCTGTATATATATAATGA+AGG | + | chr4_4:62420802-62420821 | Msa0693500:intron | 15.0% |
| !! | TTCTGTATATATATAATGAA+GGG | + | chr4_4:62420803-62420822 | Msa0693500:intron | 15.0% |
| !! | TATATACACATAAAAAATTG+TGG | - | chr4_4:62421114-62421133 | None:intergenic | 15.0% |
| !! | TGCAATAATAATTGAATAAA+AGG | - | chr4_4:62421807-62421826 | None:intergenic | 15.0% |
| !!! | TTTTTTTGTTCCTGTTATAT+TGG | + | chr4_4:62418416-62418435 | Msa0693500:five_prime_UTR | 20.0% |
| !! | CTTATTACAGATTTATTGAA+TGG | - | chr4_4:62418663-62418682 | None:intergenic | 20.0% |
| !!! | TTGAAATTTTTTACAAAGAG+AGG | + | chr4_4:62419204-62419223 | Msa0693500:CDS | 20.0% |
| !!! | TGAAATTTTTTACAAAGAGA+GGG | + | chr4_4:62419205-62419224 | Msa0693500:CDS | 20.0% |
| !! | TCTGTATATATATAATGAAG+GGG | + | chr4_4:62420804-62420823 | Msa0693500:intron | 20.0% |
| !! | GGTGAAAATTATAATTGAAA+TGG | + | chr4_4:62420837-62420856 | Msa0693500:CDS | 20.0% |
| !! | GAAATTTCTCCTTAAATATA+AGG | + | chr4_4:62421431-62421450 | Msa0693500:intron | 20.0% |
| !! | TGAAAAAGTCCTTATATTTA+AGG | - | chr4_4:62421443-62421462 | None:intergenic | 20.0% |
| !!! | GCGTTTATTTTTTACAAAAA+GGG | + | chr4_4:62421474-62421493 | Msa0693500:intron | 20.0% |
| !!! | TTATTTTTTACAAAAAGGGA+CGG | + | chr4_4:62421478-62421497 | Msa0693500:intron | 20.0% |
| !!! | TTTAGAATAATAAATCTGAG+TGG | - | chr4_4:62421746-62421765 | None:intergenic | 20.0% |
| !!! | ATTGATAAGTTTGTTGAAAA+TGG | + | chr4_4:62421874-62421893 | Msa0693500:CDS | 20.0% |
| !! | ATTCATATTCCTTATATCTT+GGG | - | chr4_4:62422066-62422085 | None:intergenic | 20.0% |
| !! | TATTCATATTCCTTATATCT+TGG | - | chr4_4:62422067-62422086 | None:intergenic | 20.0% |
| ! | ATATTGGATTTGTAAGGTTA+TGG | + | chr4_4:62418432-62418451 | Msa0693500:five_prime_UTR | 25.0% |
| !!! | TAACCAAGTTTTAAGAGATA+AGG | - | chr4_4:62418476-62418495 | None:intergenic | 25.0% |
| ! | TAATTCAAATAAAGCAAGAG+CGG | + | chr4_4:62418496-62418515 | Msa0693500:five_prime_UTR | 25.0% |
| !!! | ATATTTTTGCAAACCAAACT+TGG | + | chr4_4:62418621-62418640 | Msa0693500:CDS | 25.0% |
| ! | GTAATAAGTGTGAAATGTTA+TGG | + | chr4_4:62418675-62418694 | Msa0693500:CDS | 25.0% |
| !!! | GAAATTTTTTACAAAGAGAG+GGG | + | chr4_4:62419206-62419225 | Msa0693500:CDS | 25.0% |
| !!! | AAATTTTTTACAAAGAGAGG+GGG | + | chr4_4:62419207-62419226 | Msa0693500:CDS | 25.0% |
| ! | TCGAAAATATGCAAATAGAT+TGG | + | chr4_4:62419272-62419291 | Msa0693500:CDS | 25.0% |
| ! | ATTTAGAAGATACCAAATAC+AGG | - | chr4_4:62419481-62419500 | None:intergenic | 25.0% |
| ! | AATATATTGAATAGGGCATA+AGG | - | chr4_4:62419512-62419531 | None:intergenic | 25.0% |
| ! | TATTAAGATCTTAGGAACTA+CGG | + | chr4_4:62419528-62419547 | Msa0693500:intron | 25.0% |
| ! | ACTAGTTAAACTGTTCAATT+CGG | - | chr4_4:62419578-62419597 | None:intergenic | 25.0% |
| ! | TTAATTTAAACATGACCTAG+AGG | + | chr4_4:62419784-62419803 | Msa0693500:intron | 25.0% |
| !! | ATTTAGACTTAGTTTGGATT+AGG | - | chr4_4:62420042-62420061 | None:intergenic | 25.0% |
| ! | AATTGCATTTAGACTTAGTT+TGG | - | chr4_4:62420048-62420067 | None:intergenic | 25.0% |
| ! | ACTAAGTTTATAACTGATAG+AGG | + | chr4_4:62420537-62420556 | Msa0693500:CDS | 25.0% |
| ! | TTAGTTAAAACTCATGTTCA+TGG | + | chr4_4:62420716-62420735 | Msa0693500:intron | 25.0% |
| !! | ATTGATTTCATCGATATTTG+AGG | + | chr4_4:62421143-62421162 | Msa0693500:intron | 25.0% |
| ! | ACATTGTGGTTATTTAAAAG+TGG | + | chr4_4:62421207-62421226 | Msa0693500:intron | 25.0% |
| !! | TCTATTTATAAGCACGTTTT+GGG | + | chr4_4:62421405-62421424 | Msa0693500:intron | 25.0% |
| !!! | CGCGTTTATTTTTTACAAAA+AGG | + | chr4_4:62421473-62421492 | Msa0693500:intron | 25.0% |
| !! | CATAAAAACTGACTTTATTG+TGG | + | chr4_4:62421554-62421573 | Msa0693500:intron | 25.0% |
| !! | AAAGTATCAAACAATGAACA+TGG | + | chr4_4:62421590-62421609 | Msa0693500:CDS | 25.0% |
| ! | TATTTATTAGAGCCATGATT+TGG | + | chr4_4:62421768-62421787 | Msa0693500:intron | 25.0% |
| ! | TAAATCAGATAACCAAATCA+TGG | - | chr4_4:62421783-62421802 | None:intergenic | 25.0% |
| ! | ATATTGTAAATCAGGCTAAT+GGG | - | chr4_4:62421900-62421919 | None:intergenic | 25.0% |
| ! | AGTAATAATCCCAAGATATA+AGG | + | chr4_4:62422054-62422073 | Msa0693500:three_prime_UTR | 25.0% |
| CCTTACAAATCCAATATAAC+AGG | - | chr4_4:62418429-62418448 | None:intergenic | 30.0% | |
| CCTGTTATATTGGATTTGTA+AGG | + | chr4_4:62418426-62418445 | Msa0693500:five_prime_UTR | 30.0% | |
| TCACCTTATCTCTTAAAACT+TGG | + | chr4_4:62418470-62418489 | Msa0693500:five_prime_UTR | 30.0% | |
| AATGGTTTAGAGAAGGAAAA+AGG | + | chr4_4:62418870-62418889 | Msa0693500:CDS | 30.0% | |
| ATATCCTGTTGAGAATGTTA+GGG | + | chr4_4:62418893-62418912 | Msa0693500:CDS | 30.0% | |
| GTTGTTTATTCAACAGATGA+CGG | + | chr4_4:62419152-62419171 | Msa0693500:intron | 30.0% | |
| !!! | AATTTTTTACAAAGAGAGGG+GGG | + | chr4_4:62419208-62419227 | Msa0693500:CDS | 30.0% |
| ! | CTCATGAAATCAACTTTTGT+TGG | - | chr4_4:62419327-62419346 | None:intergenic | 30.0% |
| CATTATGAAACTCCACTTAA+GGG | + | chr4_4:62419402-62419421 | Msa0693500:CDS | 30.0% | |
| TTGTTACATATGCCTGTATT+TGG | + | chr4_4:62419466-62419485 | Msa0693500:intron | 30.0% | |
| AAATAACTGAACCGTAAACA+GGG | - | chr4_4:62419731-62419750 | None:intergenic | 30.0% | |
| !! | CTAAATGCAATTTTGAAGAG+AGG | + | chr4_4:62420056-62420075 | Msa0693500:intron | 30.0% |
| ATAATAGTGAATGCTGGAAA+CGG | + | chr4_4:62420186-62420205 | Msa0693500:CDS | 30.0% | |
| TTAGAAAATTCAGCTGATCT+TGG | + | chr4_4:62420357-62420376 | Msa0693500:CDS | 30.0% | |
| AACAAAGGGAATCCAATAAA+CGG | + | chr4_4:62420423-62420442 | Msa0693500:CDS | 30.0% | |
| ! | TGGATTTTCCTTCAATACAA+TGG | - | chr4_4:62420475-62420494 | None:intergenic | 30.0% |
| ATTGTATTGAAGGAAAATCC+AGG | + | chr4_4:62420474-62420493 | Msa0693500:CDS | 30.0% | |
| AAGTTTATAACTGATAGAGG+AGG | + | chr4_4:62420540-62420559 | Msa0693500:CDS | 30.0% | |
| CATCTTATGATTGAAACATC+TGG | + | chr4_4:62420642-62420661 | Msa0693500:CDS | 30.0% | |
| TAACTAACTAACCATCATCA+AGG | - | chr4_4:62420695-62420714 | None:intergenic | 30.0% | |
| CATCTATAAAACATTCAACG+TGG | - | chr4_4:62420767-62420786 | None:intergenic | 30.0% | |
| ! | TATAATTTTCACCACCATGT+AGG | - | chr4_4:62420830-62420849 | None:intergenic | 30.0% |
| !! | CTAAGTTCTACTGATTCATA+AGG | - | chr4_4:62420925-62420944 | None:intergenic | 30.0% |
| CTTATGAATCAGTAGAACTT+AGG | + | chr4_4:62420923-62420942 | Msa0693500:CDS | 30.0% | |
| AAATGCTAAAGCAAAAGGAT+CGG | + | chr4_4:62420969-62420988 | Msa0693500:CDS | 30.0% | |
| AAAGCTAGTTGAAGTTTAGT+TGG | - | chr4_4:62421040-62421059 | None:intergenic | 30.0% | |
| ! | AACTAAACTTCAACTAGCTT+TGG | + | chr4_4:62421039-62421058 | Msa0693500:intron | 30.0% |
| CACAATGTGTCAAAATATGT+AGG | - | chr4_4:62421195-62421214 | None:intergenic | 30.0% | |
| !!! | CTACATATTTTGACACATTG+TGG | + | chr4_4:62421193-62421212 | Msa0693500:intron | 30.0% |
| ATATTGATGCTCAAATGTAC+AGG | + | chr4_4:62421344-62421363 | Msa0693500:CDS | 30.0% | |
| CAAAACGTGCTTATAAATAG+AGG | - | chr4_4:62421406-62421425 | None:intergenic | 30.0% | |
| ! | CTCTATTTATAAGCACGTTT+TGG | + | chr4_4:62421404-62421423 | Msa0693500:intron | 30.0% |
| ! | CTATTTATAAGCACGTTTTG+GGG | + | chr4_4:62421406-62421425 | Msa0693500:intron | 30.0% |
| ACTTTATTGTGGCAAATCAA+GGG | + | chr4_4:62421565-62421584 | Msa0693500:intron | 30.0% | |
| TATCAATTTGAGCAATGTCT+AGG | - | chr4_4:62421861-62421880 | None:intergenic | 30.0% | |
| CATATTGTAAATCAGGCTAA+TGG | - | chr4_4:62421901-62421920 | None:intergenic | 30.0% | |
| AACCTTGCATATTGTAAATC+AGG | - | chr4_4:62421908-62421927 | None:intergenic | 30.0% | |
| ! | CTTGGGATTATTACTAGTTT+AGG | - | chr4_4:62422049-62422068 | None:intergenic | 30.0% |
| AGAAGATGAGAAACCAAGTT+TGG | - | chr4_4:62418637-62418656 | None:intergenic | 35.0% | |
| TGCAAAGTATGATGAAGTAG+TGG | + | chr4_4:62418701-62418720 | Msa0693500:CDS | 35.0% | |
| AAAGTATGATGAAGTAGTGG+TGG | + | chr4_4:62418704-62418723 | Msa0693500:CDS | 35.0% | |
| ATGAAGAACTGGACAAGATT+AGG | + | chr4_4:62418727-62418746 | Msa0693500:CDS | 35.0% | |
| ! | AGGCAATATCAGAGAGTTTT+GGG | + | chr4_4:62418835-62418854 | Msa0693500:CDS | 35.0% |
| GGTTATCAATGGTTTAGAGA+AGG | + | chr4_4:62418863-62418882 | Msa0693500:CDS | 35.0% | |
| GATATCCTGTTGAGAATGTT+AGG | + | chr4_4:62418892-62418911 | Msa0693500:CDS | 35.0% | |
| ! | ATCGAAGCATCATAGACAAA+TGG | - | chr4_4:62419059-62419078 | None:intergenic | 35.0% |
| TGTCTATGATGCTTCGATAA+TGG | + | chr4_4:62419061-62419080 | Msa0693500:CDS | 35.0% | |
| ! | TATGATGCTTCGATAATGGT+AGG | + | chr4_4:62419065-62419084 | Msa0693500:intron | 35.0% |
| ! | AGAAGAAGTATGTGACAAAG+CGG | + | chr4_4:62419248-62419267 | Msa0693500:CDS | 35.0% |
| ! | TCTCCTTGATGATTTCTCTT+AGG | - | chr4_4:62419365-62419384 | None:intergenic | 35.0% |
| AGTGGAGTTTCATAATGCAA+AGG | - | chr4_4:62419399-62419418 | None:intergenic | 35.0% | |
| GCATTATGAAACTCCACTTA+AGG | + | chr4_4:62419401-62419420 | Msa0693500:CDS | 35.0% | |
| CTATGGTTATTTGAGTGGTT+CGG | + | chr4_4:62419624-62419643 | Msa0693500:intron | 35.0% | |
| CAAATAACTGAACCGTAAAC+AGG | - | chr4_4:62419732-62419751 | None:intergenic | 35.0% | |
| TAAATGAGAGAGCTTCTCAA+AGG | - | chr4_4:62419976-62419995 | None:intergenic | 35.0% | |
| !! | CTTCCTTTTAACTCATAAGC+TGG | + | chr4_4:62419997-62420016 | Msa0693500:intron | 35.0% |
| ATGCCAGCTTATGAGTTAAA+AGG | - | chr4_4:62420003-62420022 | None:intergenic | 35.0% | |
| ATTTGAATACAGCGCATTAC+AGG | - | chr4_4:62420093-62420112 | None:intergenic | 35.0% | |
| CTACAGATAATAGTGAATGC+TGG | + | chr4_4:62420180-62420199 | Msa0693500:intron | 35.0% | |
| ATGAGTTTGTCACCGTTTAT+TGG | - | chr4_4:62420438-62420457 | None:intergenic | 35.0% | |
| TACCGAAATGTCATTGACAA+AGG | + | chr4_4:62420588-62420607 | Msa0693500:CDS | 35.0% | |
| CTCCTTTGTCAATGACATTT+CGG | - | chr4_4:62420593-62420612 | None:intergenic | 35.0% | |
| ATGATTGAAACATCTGGTCA+CGG | + | chr4_4:62420648-62420667 | Msa0693500:CDS | 35.0% | |
| GAAAACCATTTCCTTGATGA+TGG | + | chr4_4:62420681-62420700 | Msa0693500:CDS | 35.0% | |
| ACTAACCATCATCAAGGAAA+TGG | - | chr4_4:62420689-62420708 | None:intergenic | 35.0% | |
| GAAATGGTAAGAATGAAGCT+TGG | + | chr4_4:62420853-62420872 | Msa0693500:CDS | 35.0% | |
| AACATTTCGAAACTACATCG+AGG | + | chr4_4:62421002-62421021 | Msa0693500:CDS | 35.0% | |
| !! | GTGTTTTTATGTTGCTGTAC+AGG | + | chr4_4:62421231-62421250 | Msa0693500:intron | 35.0% |
| ! | TTTTATGTTGCTGTACAGGA+AGG | + | chr4_4:62421235-62421254 | Msa0693500:intron | 35.0% |
| TTTATGTTGCTGTACAGGAA+GGG | + | chr4_4:62421236-62421255 | Msa0693500:intron | 35.0% | |
| ATTTGAGCATCAATATGAGC+CGG | - | chr4_4:62421340-62421359 | None:intergenic | 35.0% | |
| TGCTTATAAATAGAGGCGAA+GGG | - | chr4_4:62421399-62421418 | None:intergenic | 35.0% | |
| !!! | TTTTTTACAAAAAGGGACGG+AGG | + | chr4_4:62421481-62421500 | Msa0693500:intron | 35.0% |
| ! | TTTTTACAAAAAGGGACGGA+GGG | + | chr4_4:62421482-62421501 | Msa0693500:intron | 35.0% |
| GACTTTATTGTGGCAAATCA+AGG | + | chr4_4:62421564-62421583 | Msa0693500:intron | 35.0% | |
| AACAATGAACATGGACAACA+TGG | + | chr4_4:62421599-62421618 | Msa0693500:CDS | 35.0% | |
| AGCCTGATTTACAATATGCA+AGG | + | chr4_4:62421903-62421922 | Msa0693500:exon | 35.0% | |
| CTTAACATTTAGCTATAGGC+AGG | - | chr4_4:62422025-62422044 | None:intergenic | 35.0% | |
| CTGCCTATAGCTAAATGTTA+AGG | + | chr4_4:62422023-62422042 | Msa0693500:three_prime_UTR | 35.0% | |
| AGGCCTTAACATTTAGCTAT+AGG | - | chr4_4:62422029-62422048 | None:intergenic | 35.0% | |
| TGTTGACATATGAGACAAGA+TGG | - | chr4_4:62422092-62422111 | None:intergenic | 35.0% | |
| GCGGCAAACAAAATCAACAA+TGG | + | chr4_4:62418515-62418534 | Msa0693500:exon | 40.0% | |
| ACACACTGTCATTCTTTGCT+AGG | + | chr4_4:62418591-62418610 | Msa0693500:CDS | 40.0% | |
| AAGAACTGGACAAGATTAGG+AGG | + | chr4_4:62418730-62418749 | Msa0693500:CDS | 40.0% | |
| AAGATTAGGAGGCTTCAGAA+TGG | + | chr4_4:62418741-62418760 | Msa0693500:CDS | 40.0% | |
| ! | GAGGCAATATCAGAGAGTTT+TGG | + | chr4_4:62418834-62418853 | Msa0693500:CDS | 40.0% |
| ! | GGCAATATCAGAGAGTTTTG+GGG | + | chr4_4:62418836-62418855 | Msa0693500:CDS | 40.0% |
| TGGTTGTATGGTGTTCGATA+TGG | + | chr4_4:62418989-62419008 | Msa0693500:CDS | 40.0% | |
| GGTTGTATGGTGTTCGATAT+GGG | + | chr4_4:62418990-62419009 | Msa0693500:CDS | 40.0% | |
| AATGTGCTCATGAAACAAGC+TGG | - | chr4_4:62419029-62419048 | None:intergenic | 40.0% | |
| ! | GAAGCATCATAGACAAATGG+AGG | - | chr4_4:62419056-62419075 | None:intergenic | 40.0% |
| TTCAAACCATTACGCGTGTA+AGG | - | chr4_4:62419189-62419208 | None:intergenic | 40.0% | |
| GCACCTAAGAGAAATCATCA+AGG | + | chr4_4:62419359-62419378 | Msa0693500:CDS | 40.0% | |
| AACTCCACTTAAGGGATTTC+AGG | + | chr4_4:62419410-62419429 | Msa0693500:CDS | 40.0% | |
| CAAACCTGAAATCCCTTAAG+TGG | - | chr4_4:62419417-62419436 | None:intergenic | 40.0% | |
| TTGAATAGGGCATAAGGCAA+GGG | - | chr4_4:62419506-62419525 | None:intergenic | 40.0% | |
| ATTGAATAGGGCATAAGGCA+AGG | - | chr4_4:62419507-62419526 | None:intergenic | 40.0% | |
| GGAACTACGGCATTTATGAT+AGG | + | chr4_4:62419541-62419560 | Msa0693500:intron | 40.0% | |
| AATTAGCAATGCCTGCACTA+TGG | + | chr4_4:62419607-62419626 | Msa0693500:intron | 40.0% | |
| CACTCAAATAACCATAGTGC+AGG | - | chr4_4:62419621-62419640 | None:intergenic | 40.0% | |
| CTGCACTATGGTTATTTGAG+TGG | + | chr4_4:62419619-62419638 | Msa0693500:intron | 40.0% | |
| ! | CTGCTTTAAACCACTAGAAC+CGG | - | chr4_4:62419663-62419682 | None:intergenic | 40.0% |
| CAGTTTAACCATGACTCAGA+CGG | + | chr4_4:62419680-62419699 | Msa0693500:intron | 40.0% | |
| CCATGAATTGACCCTGTTTA+CGG | + | chr4_4:62419717-62419736 | Msa0693500:intron | 40.0% | |
| TTTCCTTCTCTATGAGTGAG+TGG | - | chr4_4:62419872-62419891 | None:intergenic | 40.0% | |
| CATAAGCTGGCATAAAGCAT+AGG | + | chr4_4:62420010-62420029 | Msa0693500:intron | 40.0% | |
| TACGATGTCTTAGACAAGCT+TGG | + | chr4_4:62420228-62420247 | Msa0693500:CDS | 40.0% | |
| TGATTAGGAAACATGCCATC+AGG | - | chr4_4:62420285-62420304 | None:intergenic | 40.0% | |
| ! | TGCTTTTCTTGTCATTGCCA+TGG | - | chr4_4:62420334-62420353 | None:intergenic | 40.0% |
| TGACAAACTCATTGCTCTCA+TGG | + | chr4_4:62420446-62420465 | Msa0693500:CDS | 40.0% | |
| AACCAACGCGGTATAAACAA+TGG | - | chr4_4:62420569-62420588 | None:intergenic | 40.0% | |
| CAAAGGAGTTCAGCTTAACA+AGG | + | chr4_4:62420605-62420624 | Msa0693500:CDS | 40.0% | |
| ATATAATGAAGGGGCCTACA+TGG | + | chr4_4:62420813-62420832 | Msa0693500:intron | 40.0% | |
| ATGGTAAGAATGAAGCTTGG+TGG | + | chr4_4:62420856-62420875 | Msa0693500:CDS | 40.0% | |
| TGCTTTAGCATTTCGAGGTT+CGG | - | chr4_4:62420962-62420981 | None:intergenic | 40.0% | |
| ! | CCTTTTGCTTTAGCATTTCG+AGG | - | chr4_4:62420967-62420986 | None:intergenic | 40.0% |
| CCTCGAAATGCTAAAGCAAA+AGG | + | chr4_4:62420964-62420983 | Msa0693500:CDS | 40.0% | |
| TAGACTCATGTGGTGATTGT+TGG | + | chr4_4:62421278-62421297 | Msa0693500:CDS | 40.0% | |
| AGACTCATGTGGTGATTGTT+GGG | + | chr4_4:62421279-62421298 | Msa0693500:CDS | 40.0% | |
| !! | GGGTGTCATTTGTATCAACA+AGG | - | chr4_4:62421318-62421337 | None:intergenic | 40.0% |
| TGTTGATACAAATGACACCC+CGG | + | chr4_4:62421318-62421337 | Msa0693500:CDS | 40.0% | |
| TTTGAGCATCAATATGAGCC+GGG | - | chr4_4:62421339-62421358 | None:intergenic | 40.0% | |
| GTGCTTATAAATAGAGGCGA+AGG | - | chr4_4:62421400-62421419 | None:intergenic | 40.0% | |
| !!! | TTTATAAGCACGTTTTGGGG+AGG | + | chr4_4:62421409-62421428 | Msa0693500:intron | 40.0% |
| ATGAACATGGACAACATGGT+TGG | + | chr4_4:62421603-62421622 | Msa0693500:CDS | 40.0% | |
| TGAACATGGACAACATGGTT+GGG | + | chr4_4:62421604-62421623 | Msa0693500:CDS | 40.0% | |
| GCAAGTTCACAGCAATGTTT+GGG | - | chr4_4:62421655-62421674 | None:intergenic | 40.0% | |
| TGCAAGTTCACAGCAATGTT+TGG | - | chr4_4:62421656-62421675 | None:intergenic | 40.0% | |
| AACTTGCAATCATCTGCTCA+AGG | + | chr4_4:62421668-62421687 | Msa0693500:CDS | 40.0% | |
| ! | TGCAGTTTTCTCAAAGCAAG+TGG | + | chr4_4:62421823-62421842 | Msa0693500:intron | 40.0% |
| !! | AGTAGTGGTGGATGAAGAAC+TGG | + | chr4_4:62418716-62418735 | Msa0693500:CDS | 45.0% |
| TAGGAGGCTTCAGAATGGTT+CGG | + | chr4_4:62418746-62418765 | Msa0693500:CDS | 45.0% | |
| ! | CAGAATGGTTCGGATGTTAG+AGG | + | chr4_4:62418756-62418775 | Msa0693500:CDS | 45.0% |
| GGATGTTAGAGGAGTTGCAT+TGG | + | chr4_4:62418767-62418786 | Msa0693500:CDS | 45.0% | |
| GTTAGAGGAGTTGCATTGGA+AGG | + | chr4_4:62418771-62418790 | Msa0693500:CDS | 45.0% | |
| ACTCTCTGATATTGCCTCCA+CGG | - | chr4_4:62418832-62418851 | None:intergenic | 45.0% | |
| !!! | TATCAGAGAGTTTTGGGGAG+TGG | + | chr4_4:62418841-62418860 | Msa0693500:CDS | 45.0% |
| !!! | ATCAGAGAGTTTTGGGGAGT+GGG | + | chr4_4:62418842-62418861 | Msa0693500:CDS | 45.0% |
| !! | TTTGGGGAGTGGGTTATCAA+TGG | + | chr4_4:62418852-62418871 | Msa0693500:CDS | 45.0% |
| GACACCCTAACATTCTCAAC+AGG | - | chr4_4:62418900-62418919 | None:intergenic | 45.0% | |
| ! | GAGAATGTTAGGGTGTCTCT+TGG | + | chr4_4:62418903-62418922 | Msa0693500:CDS | 45.0% |
| ATTTAGACCCTGTGACTCGA+GGG | - | chr4_4:62418935-62418954 | None:intergenic | 45.0% | |
| AATTTAGACCCTGTGACTCG+AGG | - | chr4_4:62418936-62418955 | None:intergenic | 45.0% | |
| ! | TTGAGTGTTGCAGTGTTTGC+CGG | + | chr4_4:62418954-62418973 | Msa0693500:CDS | 45.0% |
| CATTTGCCTTACACGCGTAA+TGG | + | chr4_4:62419180-62419199 | Msa0693500:CDS | 45.0% | |
| ! | GTGCAGGCATTGCTAATTCA+TGG | - | chr4_4:62419605-62419624 | None:intergenic | 45.0% |
| CATGACTCAGACGGTTCAAT+CGG | + | chr4_4:62419689-62419708 | Msa0693500:intron | 45.0% | |
| CCGTAAACAGGGTCAATTCA+TGG | - | chr4_4:62419720-62419739 | None:intergenic | 45.0% | |
| ! | GAGCGATCACAGTTTCGTTT+TGG | + | chr4_4:62419751-62419770 | Msa0693500:intron | 45.0% |
| ACATGACCTAGAGGTCTCAT+TGG | + | chr4_4:62419793-62419812 | Msa0693500:intron | 45.0% | |
| ATCCAACCAATGAGACCTCT+AGG | - | chr4_4:62419802-62419821 | None:intergenic | 45.0% | |
| ! | GGTCTCATTGGTTGGATGTT+CGG | + | chr4_4:62419805-62419824 | Msa0693500:intron | 45.0% |
| TCTCCACTCACTCATAGAGA+AGG | + | chr4_4:62419866-62419885 | Msa0693500:intron | 45.0% | |
| !! | AAGCTTGGTGCAGATACCTT+TGG | + | chr4_4:62420243-62420262 | Msa0693500:CDS | 45.0% |
| ! | TTTGAGATGCAGAGAGCCAA+AGG | - | chr4_4:62420262-62420281 | None:intergenic | 45.0% |
| TCTCTGCATCTCAAACCTGA+TGG | + | chr4_4:62420267-62420286 | Msa0693500:CDS | 45.0% | |
| TCGGGATTGGGAATGTGATT+AGG | - | chr4_4:62420300-62420319 | None:intergenic | 45.0% | |
| TAATCACATTCCCAATCCCG+AGG | + | chr4_4:62420299-62420318 | Msa0693500:CDS | 45.0% | |
| ! | GCAATTTTGTCCTCGGGATT+GGG | - | chr4_4:62420312-62420331 | None:intergenic | 45.0% |
| ! | TGCCATGGCAATTTTGTCCT+CGG | - | chr4_4:62420319-62420338 | None:intergenic | 45.0% |
| GATACCGATGTTGACAGAAG+CGG | + | chr4_4:62420390-62420409 | Msa0693500:CDS | 45.0% | |
| CATGGCTGCCATTGTATTGA+AGG | + | chr4_4:62420464-62420483 | Msa0693500:CDS | 45.0% | |
| TCGGTTACTATGGTTGATCC+TGG | - | chr4_4:62420495-62420514 | None:intergenic | 45.0% | |
| CACCATTGTTTATACCGCGT+TGG | + | chr4_4:62420564-62420583 | Msa0693500:CDS | 45.0% | |
| TGACATTTCGGTAACCAACG+CGG | - | chr4_4:62420581-62420600 | None:intergenic | 45.0% | |
| AGGAGTTCAGCTTAACAAGG+AGG | + | chr4_4:62420608-62420627 | Msa0693500:CDS | 45.0% | |
| GGAGTTCAGCTTAACAAGGA+GGG | + | chr4_4:62420609-62420628 | Msa0693500:CDS | 45.0% | |
| ! | AAGCTTGGTGGATCAGATGA+AGG | + | chr4_4:62420868-62420887 | Msa0693500:CDS | 45.0% |
| ! | AGCTTGGTGGATCAGATGAA+GGG | + | chr4_4:62420869-62420888 | Msa0693500:CDS | 45.0% |
| TGCTAAAGCAAAAGGATCGG+AGG | + | chr4_4:62420972-62420991 | Msa0693500:CDS | 45.0% | |
| TACAGGAAGGGAGGCTTAAA+GGG | + | chr4_4:62421248-62421267 | Msa0693500:intron | 45.0% | |
| GTGATTGTTGGGTGAGTGAA+GGG | + | chr4_4:62421290-62421309 | Msa0693500:CDS | 45.0% | |
| TTGAGCATCAATATGAGCCG+GGG | - | chr4_4:62421338-62421357 | None:intergenic | 45.0% | |
| AACATGGTTGGGTACACATG+AGG | + | chr4_4:62421615-62421634 | Msa0693500:CDS | 45.0% | |
| TTGCAATCATCTGCTCAAGG+AGG | + | chr4_4:62421671-62421690 | Msa0693500:CDS | 45.0% | |
| TCAAGGAGGTTGCTTGTCAA+TGG | + | chr4_4:62421685-62421704 | Msa0693500:CDS | 45.0% | |
| GTTGCATTGGAAGGCGAGAA+AGG | + | chr4_4:62418780-62418799 | Msa0693500:CDS | 50.0% | |
| GAACACCATACAACCAGCAC+GGG | - | chr4_4:62418985-62419004 | None:intergenic | 50.0% | |
| CGAACACCATACAACCAGCA+CGG | - | chr4_4:62418986-62419005 | None:intergenic | 50.0% | |
| CATGAAACAAGCTGGTGTGG+TGG | - | chr4_4:62419021-62419040 | None:intergenic | 50.0% | |
| GCTCATGAAACAAGCTGGTG+TGG | - | chr4_4:62419024-62419043 | None:intergenic | 50.0% | |
| ! | CACTTTCGTTCCGGTTCTAG+TGG | + | chr4_4:62419650-62419669 | Msa0693500:intron | 50.0% |
| CGATTGAACCGTCTGAGTCA+TGG | - | chr4_4:62419691-62419710 | None:intergenic | 50.0% | |
| GACCTAGAGGTCTCATTGGT+TGG | + | chr4_4:62419797-62419816 | Msa0693500:intron | 50.0% | |
| GTGAATGCTGGAAACGGTTC+AGG | + | chr4_4:62420192-62420211 | Msa0693500:CDS | 50.0% | |
| AATGCTGGAAACGGTTCAGG+AGG | + | chr4_4:62420195-62420214 | Msa0693500:CDS | 50.0% | |
| ! | GGCAATTTTGTCCTCGGGAT+TGG | - | chr4_4:62420313-62420332 | None:intergenic | 50.0% |
| TCCCGAGGACAAAATTGCCA+TGG | + | chr4_4:62420314-62420333 | Msa0693500:CDS | 50.0% | |
| ! | GCCATGGCAATTTTGTCCTC+GGG | - | chr4_4:62420318-62420337 | None:intergenic | 50.0% |
| !! | AGCGGCGTGGTTGATAACAA+AGG | + | chr4_4:62420408-62420427 | Msa0693500:CDS | 50.0% |
| !! | GCGGCGTGGTTGATAACAAA+GGG | + | chr4_4:62420409-62420428 | Msa0693500:CDS | 50.0% |
| !! | TGTGCGAGCATCGGTTACTA+TGG | - | chr4_4:62420505-62420524 | None:intergenic | 50.0% |
| TAATGAAGGGGCCTACATGG+TGG | + | chr4_4:62420816-62420835 | Msa0693500:intron | 50.0% | |
| GGTGGATCAGATGAAGGGAT+TGG | + | chr4_4:62420874-62420893 | Msa0693500:CDS | 50.0% | |
| ATGTTGCTGTACAGGAAGGG+AGG | + | chr4_4:62421239-62421258 | Msa0693500:intron | 50.0% | |
| GTACAGGAAGGGAGGCTTAA+AGG | + | chr4_4:62421247-62421266 | Msa0693500:intron | 50.0% | |
| GGTGATTGTTGGGTGAGTGA+AGG | + | chr4_4:62421289-62421308 | Msa0693500:CDS | 50.0% | |
| TCTGATATTGCCTCCACGGC+AGG | - | chr4_4:62418828-62418847 | None:intergenic | 55.0% | |
| !! | TCTTGCCCGTGCTGGTTGTA+TGG | + | chr4_4:62418977-62418996 | Msa0693500:CDS | 55.0% |
| GTTCGGTCGCACTTTCGTTC+CGG | + | chr4_4:62419641-62419660 | Msa0693500:intron | 55.0% | |
| CACGCCGCTTCTGTCAACAT+CGG | - | chr4_4:62420397-62420416 | None:intergenic | 55.0% | |
| CGACATGCTTGTGCGAGCAT+CGG | - | chr4_4:62420514-62420533 | None:intergenic | 55.0% | |
| AGGAAGGGAGGCTTAAAGGG+TGG | + | chr4_4:62421251-62421270 | Msa0693500:intron | 55.0% | |
| GGAAGGGAGGCTTAAAGGGT+GGG | + | chr4_4:62421252-62421271 | Msa0693500:intron | 55.0% | |
| GGGTGGGAGTTAGACTCATG+TGG | + | chr4_4:62421268-62421287 | Msa0693500:CDS | 55.0% | |
| !! | AGGGACGGAGGGAGTATTCT+AGG | + | chr4_4:62421493-62421512 | Msa0693500:intron | 55.0% |
| GATATTGCCTCCACGGCAGG+AGG | - | chr4_4:62418825-62418844 | None:intergenic | 60.0% | |
| ACAACCAGCACGGGCAAGAC+CGG | - | chr4_4:62418976-62418995 | None:intergenic | 60.0% | |
| CGATGTTGACAGAAGCGGCG+TGG | + | chr4_4:62420395-62420414 | Msa0693500:CDS | 60.0% | |
| CGACCTTACTCCTCCTGCCG+TGG | + | chr4_4:62418812-62418831 | Msa0693500:CDS | 65.0% | |
| CCTCCACGGCAGGAGGAGTA+AGG | - | chr4_4:62418818-62418837 | None:intergenic | 65.0% | |
| CCTTACTCCTCCTGCCGTGG+AGG | + | chr4_4:62418815-62418834 | Msa0693500:CDS | 65.0% | |
| GACGCGACCCTCGAGTCACA+GGG | + | chr4_4:62418925-62418944 | Msa0693500:CDS | 65.0% | |
| TTTGCCGGTCTTGCCCGTGC+TGG | + | chr4_4:62418969-62418988 | Msa0693500:CDS | 65.0% | |
| ! | GAGAGGGGGGCTGACTTCAC+TGG | + | chr4_4:62419221-62419240 | Msa0693500:CDS | 65.0% |
| ! | AGGGGGGCTGACTTCACTGG+CGG | + | chr4_4:62419224-62419243 | Msa0693500:CDS | 65.0% |
| GGACGCGACCCTCGAGTCAC+AGG | + | chr4_4:62418924-62418943 | Msa0693500:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 62418391 | 62422115 | 62418391 | ID=Msa0693500;Name=Msa0693500 |
| chr4_4 | mRNA | 62418391 | 62422115 | 62418391 | ID=Msa0693500-mRNA-1;Parent=Msa0693500;Name=Msa0693500-mRNA-1;_AED=0.03;_eAED=0.03;_QI=143|1|1|1|1|1|7|206|621 |
| chr4_4 | exon | 62418391 | 62419082 | 62418391 | ID=Msa0693500-mRNA-1:exon:17457;Parent=Msa0693500-mRNA-1 |
| chr4_4 | exon | 62419168 | 62419431 | 62419168 | ID=Msa0693500-mRNA-1:exon:17458;Parent=Msa0693500-mRNA-1 |
| chr4_4 | exon | 62420186 | 62420702 | 62420186 | ID=Msa0693500-mRNA-1:exon:17459;Parent=Msa0693500-mRNA-1 |
| chr4_4 | exon | 62420824 | 62421023 | 62420824 | ID=Msa0693500-mRNA-1:exon:17460;Parent=Msa0693500-mRNA-1 |
| chr4_4 | exon | 62421253 | 62421365 | 62421253 | ID=Msa0693500-mRNA-1:exon:17461;Parent=Msa0693500-mRNA-1 |
| chr4_4 | exon | 62421586 | 62421726 | 62421586 | ID=Msa0693500-mRNA-1:exon:17462;Parent=Msa0693500-mRNA-1 |
| chr4_4 | exon | 62421828 | 62422115 | 62421828 | ID=Msa0693500-mRNA-1:exon:17463;Parent=Msa0693500-mRNA-1 |
| chr4_4 | five_prime_UTR | 62418391 | 62418533 | 62418391 | ID=Msa0693500-mRNA-1:five_prime_utr;Parent=Msa0693500-mRNA-1 |
| chr4_4 | CDS | 62418534 | 62419082 | 62418534 | ID=Msa0693500-mRNA-1:cds;Parent=Msa0693500-mRNA-1 |
| chr4_4 | CDS | 62419168 | 62419431 | 62419168 | ID=Msa0693500-mRNA-1:cds;Parent=Msa0693500-mRNA-1 |
| chr4_4 | CDS | 62420186 | 62420702 | 62420186 | ID=Msa0693500-mRNA-1:cds;Parent=Msa0693500-mRNA-1 |
| chr4_4 | CDS | 62420824 | 62421023 | 62420824 | ID=Msa0693500-mRNA-1:cds;Parent=Msa0693500-mRNA-1 |
| chr4_4 | CDS | 62421253 | 62421365 | 62421253 | ID=Msa0693500-mRNA-1:cds;Parent=Msa0693500-mRNA-1 |
| chr4_4 | CDS | 62421586 | 62421726 | 62421586 | ID=Msa0693500-mRNA-1:cds;Parent=Msa0693500-mRNA-1 |
| chr4_4 | CDS | 62421828 | 62421909 | 62421828 | ID=Msa0693500-mRNA-1:cds;Parent=Msa0693500-mRNA-1 |
| chr4_4 | three_prime_UTR | 62421910 | 62422115 | 62421910 | ID=Msa0693500-mRNA-1:three_prime_utr;Parent=Msa0693500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
