AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0959050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0959050 MtrunA17_Chr6g0477001 92.308 39 3 0 1 39 263 301 9.47e-19 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 22 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATAATTTAGTGATGAATT+AGG 0.211043 6_3:+75411329 Msa0959050:three_prime_UTR
AATTGCAAAATCTCTGTAAA+TGG 0.254058 6_3:-75411244 None:intergenic
CATAATTTAGTGATGAATTA+GGG 0.347283 6_3:+75411330 Msa0959050:three_prime_UTR
AAACAAGCTTACCAGTTTGC+AGG 0.361797 6_3:-75409718 None:intergenic
CAGAATGGAGGCCTGCAAAC+TGG 0.440962 6_3:+75409707 Msa0959050:CDS
ATGACATGTCAAAAGAAGAA+TGG 0.445126 6_3:+75410430 Msa0959050:CDS
TTCTTCTGAGTTCAGAGTAC+CGG 0.445202 6_3:+75411160 Msa0959050:three_prime_UTR
CAGGTGAAGGAAGTGAAAAT+TGG 0.446695 6_3:+75411007 Msa0959050:three_prime_UTR
CAGGATTTGCATAGAATACA+AGG 0.447678 6_3:-75411190 None:intergenic
TGACATGTCAAAAGAAGAAT+GGG 0.471345 6_3:+75410431 Msa0959050:CDS
AAATTTCAATCAATGAGACT+TGG 0.491736 6_3:-75411105 None:intergenic
AATTTCAATCAATGAGACTT+GGG 0.521086 6_3:-75411104 None:intergenic
AATTGAGTAAGCAATTTGAA+TGG 0.521092 6_3:-75409875 None:intergenic
CCTGATTGTACTGTAAAATG+AGG 0.527130 6_3:+75411209 Msa0959050:three_prime_UTR
TTGTGATGCAACTCTTAAGC+AGG 0.534435 6_3:+75410465 Msa0959050:three_prime_UTR
TTTCAGATCATGTTTGAGGA+TGG 0.537141 6_3:+75410393 Msa0959050:intron
GTTATTATGATAAAACAACT+TGG 0.570866 6_3:+75409909 Msa0959050:CDS
TATGTGTTGTTCAGAGGTGC+AGG 0.576355 6_3:+75410988 Msa0959050:intron
TATCAAACAGAATATGAAGA+GGG 0.612264 6_3:+75411072 Msa0959050:three_prime_UTR
TTGTTCAGAGGTGCAGGTGA+AGG 0.629492 6_3:+75410994 Msa0959050:intron
TTATCAAACAGAATATGAAG+AGG 0.643212 6_3:+75411071 Msa0959050:three_prime_UTR
TAAAACAACTTGGAAATGTG+AGG 0.644254 6_3:+75409919 Msa0959050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTATTATAACATGAAATTA+AGG - chr6_3:75409993-75410012 None:intergenic 15.0%
!!! GCAAAATAATAGATTTTTAT+TGG + chr6_3:75410248-75410267 Msa0959050:intron 15.0%
!!! AAATAATCTCTAGAATTTAA+AGG - chr6_3:75410315-75410334 None:intergenic 15.0%
!! AAGATTATATTATACCTATA+GGG - chr6_3:75410659-75410678 None:intergenic 15.0%
!! AAAGATTATATTATACCTAT+AGG - chr6_3:75410660-75410679 None:intergenic 15.0%
!! CTTATTATAACATGAAATTA+AGG - chr6_3:75409993-75410012 None:intergenic 15.0%
!!! GCAAAATAATAGATTTTTAT+TGG + chr6_3:75410248-75410267 Msa0959050:intron 15.0%
!!! AAATAATCTCTAGAATTTAA+AGG - chr6_3:75410315-75410334 None:intergenic 15.0%
!! AAGATTATATTATACCTATA+GGG - chr6_3:75410659-75410678 None:intergenic 15.0%
!! AAAGATTATATTATACCTAT+AGG - chr6_3:75410660-75410679 None:intergenic 15.0%
!! GTTATTATGATAAAACAACT+TGG + chr6_3:75409909-75409928 Msa0959050:CDS 20.0%
!!! TAACTGCTTTTTAAAATTAG+TGG - chr6_3:75410210-75410229 None:intergenic 20.0%
!!! AATTCTAGAGATTATTTAGT+CGG + chr6_3:75410318-75410337 Msa0959050:intron 20.0%
!! GTTATTATGATAAAACAACT+TGG + chr6_3:75409909-75409928 Msa0959050:CDS 20.0%
!!! TAACTGCTTTTTAAAATTAG+TGG - chr6_3:75410210-75410229 None:intergenic 20.0%
!!! AATTCTAGAGATTATTTAGT+CGG + chr6_3:75410318-75410337 Msa0959050:intron 20.0%
!!! TTTTTGTTGTCTTCTACAAT+AGG + chr6_3:75409799-75409818 Msa0959050:intron 25.0%
!!! TTCTGTTGTATTGATTTTAC+AGG + chr6_3:75409834-75409853 Msa0959050:intron 25.0%
! AATTGAGTAAGCAATTTGAA+TGG - chr6_3:75409878-75409897 None:intergenic 25.0%
!! ATTTTATAATGCTGCAGATT+TGG + chr6_3:75410037-75410056 Msa0959050:intron 25.0%
!! TTTTATAATGCTGCAGATTT+GGG + chr6_3:75410038-75410057 Msa0959050:intron 25.0%
! CTAATTAACAATGACAATGT+AGG - chr6_3:75410127-75410146 None:intergenic 25.0%
!!! CTTTTTAAAATTAGTGGTAC+TGG - chr6_3:75410204-75410223 None:intergenic 25.0%
! TTAAAAAGCAGTTATGAAAG+TGG + chr6_3:75410216-75410235 Msa0959050:intron 25.0%
!! ATTCTAGAGATTATTTAGTC+GGG + chr6_3:75410319-75410338 Msa0959050:intron 25.0%
! TATATTATACCTATAGGGTT+AGG - chr6_3:75410654-75410673 None:intergenic 25.0%
! CAACTTATGAAAATAGCTTA+TGG + chr6_3:75410794-75410813 Msa0959050:intron 25.0%
! TTATCAAACAGAATATGAAG+AGG + chr6_3:75411071-75411090 Msa0959050:three_prime_UTR 25.0%
! TATCAAACAGAATATGAAGA+GGG + chr6_3:75411072-75411091 Msa0959050:three_prime_UTR 25.0%
! AATTTCAATCAATGAGACTT+GGG - chr6_3:75411107-75411126 None:intergenic 25.0%
! AAATTTCAATCAATGAGACT+TGG - chr6_3:75411108-75411127 None:intergenic 25.0%
!!! TAGAATACAAGGATTTTTTC+CGG - chr6_3:75411182-75411201 None:intergenic 25.0%
! AATTGCAAAATCTCTGTAAA+TGG - chr6_3:75411247-75411266 None:intergenic 25.0%
!!! TTAGACCATTTTTTAGCATA+AGG + chr6_3:75411303-75411322 Msa0959050:three_prime_UTR 25.0%
!!! TTTTTGTTGTCTTCTACAAT+AGG + chr6_3:75409799-75409818 Msa0959050:intron 25.0%
!!! TTCTGTTGTATTGATTTTAC+AGG + chr6_3:75409834-75409853 Msa0959050:intron 25.0%
! AATTGAGTAAGCAATTTGAA+TGG - chr6_3:75409878-75409897 None:intergenic 25.0%
!! ATTTTATAATGCTGCAGATT+TGG + chr6_3:75410037-75410056 Msa0959050:intron 25.0%
!! TTTTATAATGCTGCAGATTT+GGG + chr6_3:75410038-75410057 Msa0959050:intron 25.0%
! CTAATTAACAATGACAATGT+AGG - chr6_3:75410127-75410146 None:intergenic 25.0%
!!! CTTTTTAAAATTAGTGGTAC+TGG - chr6_3:75410204-75410223 None:intergenic 25.0%
! TTAAAAAGCAGTTATGAAAG+TGG + chr6_3:75410216-75410235 Msa0959050:intron 25.0%
!! ATTCTAGAGATTATTTAGTC+GGG + chr6_3:75410319-75410338 Msa0959050:intron 25.0%
! TATATTATACCTATAGGGTT+AGG - chr6_3:75410654-75410673 None:intergenic 25.0%
! CAACTTATGAAAATAGCTTA+TGG + chr6_3:75410794-75410813 Msa0959050:intron 25.0%
! TTATCAAACAGAATATGAAG+AGG + chr6_3:75411071-75411090 Msa0959050:three_prime_UTR 25.0%
! TATCAAACAGAATATGAAGA+GGG + chr6_3:75411072-75411091 Msa0959050:three_prime_UTR 25.0%
! AATTTCAATCAATGAGACTT+GGG - chr6_3:75411107-75411126 None:intergenic 25.0%
! AAATTTCAATCAATGAGACT+TGG - chr6_3:75411108-75411127 None:intergenic 25.0%
!!! TAGAATACAAGGATTTTTTC+CGG - chr6_3:75411182-75411201 None:intergenic 25.0%
! AATTGCAAAATCTCTGTAAA+TGG - chr6_3:75411247-75411266 None:intergenic 25.0%
!!! TTAGACCATTTTTTAGCATA+AGG + chr6_3:75411303-75411322 Msa0959050:three_prime_UTR 25.0%
TGTAGAAGACAACAAAAAGA+AGG - chr6_3:75409797-75409816 None:intergenic 30.0%
!!! TGTTGTATTGATTTTACAGG+TGG + chr6_3:75409837-75409856 Msa0959050:intron 30.0%
TAAAACAACTTGGAAATGTG+AGG + chr6_3:75409919-75409938 Msa0959050:CDS 30.0%
! GCAGATTTGGGATTATTAAA+TGG + chr6_3:75410050-75410069 Msa0959050:intron 30.0%
TGAATATTCTCGAAAACACA+AGG + chr6_3:75410078-75410097 Msa0959050:intron 30.0%
!! GTCAGAGATTAGAGTTTTAA+TGG + chr6_3:75410100-75410119 Msa0959050:intron 30.0%
ATGACATGTCAAAAGAAGAA+TGG + chr6_3:75410430-75410449 Msa0959050:CDS 30.0%
TGACATGTCAAAAGAAGAAT+GGG + chr6_3:75410431-75410450 Msa0959050:CDS 30.0%
ATGCAAAAGAAATACTCACA+TGG - chr6_3:75410499-75410518 None:intergenic 30.0%
TCAAATAAGCCAATTGAAAC+AGG - chr6_3:75410541-75410560 None:intergenic 30.0%
ACCTAAAATTGAAGCATATG+AGG + chr6_3:75410695-75410714 Msa0959050:intron 30.0%
TGTTACATGTTACCAAACAT+TGG + chr6_3:75410919-75410938 Msa0959050:intron 30.0%
! TAGTTGCTATTCGCAAAAAT+GGG + chr6_3:75410947-75410966 Msa0959050:intron 30.0%
GAGTTCCTTATGCTAAAAAA+TGG - chr6_3:75411311-75411330 None:intergenic 30.0%
TGTAGAAGACAACAAAAAGA+AGG - chr6_3:75409797-75409816 None:intergenic 30.0%
!!! TGTTGTATTGATTTTACAGG+TGG + chr6_3:75409837-75409856 Msa0959050:intron 30.0%
TAAAACAACTTGGAAATGTG+AGG + chr6_3:75409919-75409938 Msa0959050:CDS 30.0%
! GCAGATTTGGGATTATTAAA+TGG + chr6_3:75410050-75410069 Msa0959050:intron 30.0%
TGAATATTCTCGAAAACACA+AGG + chr6_3:75410078-75410097 Msa0959050:intron 30.0%
!! GTCAGAGATTAGAGTTTTAA+TGG + chr6_3:75410100-75410119 Msa0959050:intron 30.0%
ATGACATGTCAAAAGAAGAA+TGG + chr6_3:75410430-75410449 Msa0959050:CDS 30.0%
TGACATGTCAAAAGAAGAAT+GGG + chr6_3:75410431-75410450 Msa0959050:CDS 30.0%
ATGCAAAAGAAATACTCACA+TGG - chr6_3:75410499-75410518 None:intergenic 30.0%
TCAAATAAGCCAATTGAAAC+AGG - chr6_3:75410541-75410560 None:intergenic 30.0%
ACCTAAAATTGAAGCATATG+AGG + chr6_3:75410695-75410714 Msa0959050:intron 30.0%
TGTTACATGTTACCAAACAT+TGG + chr6_3:75410919-75410938 Msa0959050:intron 30.0%
! TAGTTGCTATTCGCAAAAAT+GGG + chr6_3:75410947-75410966 Msa0959050:intron 30.0%
GAGTTCCTTATGCTAAAAAA+TGG - chr6_3:75411311-75411330 None:intergenic 30.0%
! ACCTTTTCAGATCATGTTTG+AGG + chr6_3:75410389-75410408 Msa0959050:intron 35.0%
TCCTCAAACATGATCTGAAA+AGG - chr6_3:75410393-75410412 None:intergenic 35.0%
TTTCAGATCATGTTTGAGGA+TGG + chr6_3:75410393-75410412 Msa0959050:intron 35.0%
TGAGCTTTCATAAGTACTTG+TGG + chr6_3:75410558-75410577 Msa0959050:intron 35.0%
GAGCTTTCATAAGTACTTGT+GGG + chr6_3:75410559-75410578 Msa0959050:intron 35.0%
TAGGATTAACCTAACCCTAT+AGG + chr6_3:75410642-75410661 Msa0959050:intron 35.0%
! GCCTCATATGCTTCAATTTT+AGG - chr6_3:75410699-75410718 None:intergenic 35.0%
AATAAGCTGAAAACAACGCA+AGG - chr6_3:75410825-75410844 None:intergenic 35.0%
!! GCTTATTTTCATAAGCTCTC+CGG + chr6_3:75410838-75410857 Msa0959050:intron 35.0%
!! CTTATTTTCATAAGCTCTCC+GGG + chr6_3:75410839-75410858 Msa0959050:intron 35.0%
! GATGTTTTCATAAGCTATCC+CGG - chr6_3:75410860-75410879 None:intergenic 35.0%
! GTTTGGTAACATGTAACAAC+AGG - chr6_3:75410917-75410936 None:intergenic 35.0%
! CTAGTTGCTATTCGCAAAAA+TGG + chr6_3:75410946-75410965 Msa0959050:intron 35.0%
CAGGATTTGCATAGAATACA+AGG - chr6_3:75411193-75411212 None:intergenic 35.0%
! CCTCATTTTACAGTACAATC+AGG - chr6_3:75411212-75411231 None:intergenic 35.0%
CCTGATTGTACTGTAAAATG+AGG + chr6_3:75411209-75411228 Msa0959050:three_prime_UTR 35.0%
! ACCTTTTCAGATCATGTTTG+AGG + chr6_3:75410389-75410408 Msa0959050:intron 35.0%
TCCTCAAACATGATCTGAAA+AGG - chr6_3:75410393-75410412 None:intergenic 35.0%
TTTCAGATCATGTTTGAGGA+TGG + chr6_3:75410393-75410412 Msa0959050:intron 35.0%
TGAGCTTTCATAAGTACTTG+TGG + chr6_3:75410558-75410577 Msa0959050:intron 35.0%
GAGCTTTCATAAGTACTTGT+GGG + chr6_3:75410559-75410578 Msa0959050:intron 35.0%
TAGGATTAACCTAACCCTAT+AGG + chr6_3:75410642-75410661 Msa0959050:intron 35.0%
! GCCTCATATGCTTCAATTTT+AGG - chr6_3:75410699-75410718 None:intergenic 35.0%
AATAAGCTGAAAACAACGCA+AGG - chr6_3:75410825-75410844 None:intergenic 35.0%
!! GCTTATTTTCATAAGCTCTC+CGG + chr6_3:75410838-75410857 Msa0959050:intron 35.0%
!! CTTATTTTCATAAGCTCTCC+GGG + chr6_3:75410839-75410858 Msa0959050:intron 35.0%
! GATGTTTTCATAAGCTATCC+CGG - chr6_3:75410860-75410879 None:intergenic 35.0%
! GTTTGGTAACATGTAACAAC+AGG - chr6_3:75410917-75410936 None:intergenic 35.0%
! CTAGTTGCTATTCGCAAAAA+TGG + chr6_3:75410946-75410965 Msa0959050:intron 35.0%
CAGGATTTGCATAGAATACA+AGG - chr6_3:75411193-75411212 None:intergenic 35.0%
! CCTCATTTTACAGTACAATC+AGG - chr6_3:75411212-75411231 None:intergenic 35.0%
CCTGATTGTACTGTAAAATG+AGG + chr6_3:75411209-75411228 Msa0959050:three_prime_UTR 35.0%
AAACAAGCTTACCAGTTTGC+AGG - chr6_3:75409721-75409740 None:intergenic 40.0%
GACAGATGGATACTTTCGAT+TGG - chr6_3:75410172-75410191 None:intergenic 40.0%
GTTATGAAAGTGGAACTGTG+TGG + chr6_3:75410226-75410245 Msa0959050:intron 40.0%
TTGTGATGCAACTCTTAAGC+AGG + chr6_3:75410465-75410484 Msa0959050:three_prime_UTR 40.0%
GCATATGAGGCTGCATTAAT+CGG + chr6_3:75410708-75410727 Msa0959050:intron 40.0%
CATATGAGGCTGCATTAATC+GGG + chr6_3:75410709-75410728 Msa0959050:intron 40.0%
AATCGGGAATACATGACAGA+AGG + chr6_3:75410725-75410744 Msa0959050:intron 40.0%
ATCGGGAATACATGACAGAA+GGG + chr6_3:75410726-75410745 Msa0959050:intron 40.0%
ACAGTCTCACAGGTACTTTA+TGG - chr6_3:75410768-75410787 None:intergenic 40.0%
! GTTGTTTCAAACAGTCTCAC+AGG - chr6_3:75410778-75410797 None:intergenic 40.0%
CAGGAGAGAATGGAACAATT+TGG - chr6_3:75410898-75410917 None:intergenic 40.0%
CATGTAACAACAGGAGAGAA+TGG - chr6_3:75410908-75410927 None:intergenic 40.0%
GCAACTAGTTAGCCAATGTT+TGG - chr6_3:75410934-75410953 None:intergenic 40.0%
! GCTAACTATGTGTTGTTCAG+AGG + chr6_3:75410982-75411001 Msa0959050:intron 40.0%
CAGGTGAAGGAAGTGAAAAT+TGG + chr6_3:75411007-75411026 Msa0959050:three_prime_UTR 40.0%
TTCTTCTGAGTTCAGAGTAC+CGG + chr6_3:75411160-75411179 Msa0959050:three_prime_UTR 40.0%
AAACAAGCTTACCAGTTTGC+AGG - chr6_3:75409721-75409740 None:intergenic 40.0%
GACAGATGGATACTTTCGAT+TGG - chr6_3:75410172-75410191 None:intergenic 40.0%
GTTATGAAAGTGGAACTGTG+TGG + chr6_3:75410226-75410245 Msa0959050:intron 40.0%
TTGTGATGCAACTCTTAAGC+AGG + chr6_3:75410465-75410484 Msa0959050:three_prime_UTR 40.0%
GCATATGAGGCTGCATTAAT+CGG + chr6_3:75410708-75410727 Msa0959050:intron 40.0%
CATATGAGGCTGCATTAATC+GGG + chr6_3:75410709-75410728 Msa0959050:intron 40.0%
AATCGGGAATACATGACAGA+AGG + chr6_3:75410725-75410744 Msa0959050:intron 40.0%
ATCGGGAATACATGACAGAA+GGG + chr6_3:75410726-75410745 Msa0959050:intron 40.0%
ACAGTCTCACAGGTACTTTA+TGG - chr6_3:75410768-75410787 None:intergenic 40.0%
! GTTGTTTCAAACAGTCTCAC+AGG - chr6_3:75410778-75410797 None:intergenic 40.0%
CAGGAGAGAATGGAACAATT+TGG - chr6_3:75410898-75410917 None:intergenic 40.0%
CATGTAACAACAGGAGAGAA+TGG - chr6_3:75410908-75410927 None:intergenic 40.0%
GCAACTAGTTAGCCAATGTT+TGG - chr6_3:75410934-75410953 None:intergenic 40.0%
! GCTAACTATGTGTTGTTCAG+AGG + chr6_3:75410982-75411001 Msa0959050:intron 40.0%
CAGGTGAAGGAAGTGAAAAT+TGG + chr6_3:75411007-75411026 Msa0959050:three_prime_UTR 40.0%
TTCTTCTGAGTTCAGAGTAC+CGG + chr6_3:75411160-75411179 Msa0959050:three_prime_UTR 40.0%
!! TTAGTGGTACTGGTGTGACA+TGG - chr6_3:75410194-75410213 None:intergenic 45.0%
GACATCGTGCCTGTTTCAAT+TGG + chr6_3:75410529-75410548 Msa0959050:intron 45.0%
! TATGTGTTGTTCAGAGGTGC+AGG + chr6_3:75410988-75411007 Msa0959050:intron 45.0%
!! TTAGTGGTACTGGTGTGACA+TGG - chr6_3:75410194-75410213 None:intergenic 45.0%
GACATCGTGCCTGTTTCAAT+TGG + chr6_3:75410529-75410548 Msa0959050:intron 45.0%
! TATGTGTTGTTCAGAGGTGC+AGG + chr6_3:75410988-75411007 Msa0959050:intron 45.0%
ACTGGTGTGACATGGACAGA+TGG - chr6_3:75410186-75410205 None:intergenic 50.0%
CTAGTACCAAGAGGCAGCAT+GGG - chr6_3:75410617-75410636 None:intergenic 50.0%
ACTAGTACCAAGAGGCAGCA+TGG - chr6_3:75410618-75410637 None:intergenic 50.0%
ATGCTGCCTCTTGGTACTAG+TGG + chr6_3:75410617-75410636 Msa0959050:intron 50.0%
TGCTGCCTCTTGGTACTAGT+GGG + chr6_3:75410618-75410637 Msa0959050:intron 50.0%
! TTGTTCAGAGGTGCAGGTGA+AGG + chr6_3:75410994-75411013 Msa0959050:intron 50.0%
ACTGGTGTGACATGGACAGA+TGG - chr6_3:75410186-75410205 None:intergenic 50.0%
CTAGTACCAAGAGGCAGCAT+GGG - chr6_3:75410617-75410636 None:intergenic 50.0%
ACTAGTACCAAGAGGCAGCA+TGG - chr6_3:75410618-75410637 None:intergenic 50.0%
ATGCTGCCTCTTGGTACTAG+TGG + chr6_3:75410617-75410636 Msa0959050:intron 50.0%
TGCTGCCTCTTGGTACTAGT+GGG + chr6_3:75410618-75410637 Msa0959050:intron 50.0%
! TTGTTCAGAGGTGCAGGTGA+AGG + chr6_3:75410994-75411013 Msa0959050:intron 50.0%
CAGAATGGAGGCCTGCAAAC+TGG + chr6_3:75409707-75409726 Msa0959050:CDS 55.0%
TCTTCTCCCATGCTGCCTCT+TGG + chr6_3:75410608-75410627 Msa0959050:intron 55.0%
GCTGCCTCTTGGTACTAGTG+GGG + chr6_3:75410619-75410638 Msa0959050:intron 55.0%
CCTACCCCACTAGTACCAAG+AGG - chr6_3:75410626-75410645 None:intergenic 55.0%
CCTCTTGGTACTAGTGGGGT+AGG + chr6_3:75410623-75410642 Msa0959050:intron 55.0%
CAGAATGGAGGCCTGCAAAC+TGG + chr6_3:75409707-75409726 Msa0959050:CDS 55.0%
TCTTCTCCCATGCTGCCTCT+TGG + chr6_3:75410608-75410627 Msa0959050:intron 55.0%
GCTGCCTCTTGGTACTAGTG+GGG + chr6_3:75410619-75410638 Msa0959050:intron 55.0%
CCTACCCCACTAGTACCAAG+AGG - chr6_3:75410626-75410645 None:intergenic 55.0%
CCTCTTGGTACTAGTGGGGT+AGG + chr6_3:75410623-75410642 Msa0959050:intron 55.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 75409698 75411349 75409698 ID=Msa0959050;Name=Msa0959050
chr6_3 mRNA 75409698 75411349 75409698 ID=Msa0959050-mRNA-1;Parent=Msa0959050;Name=Msa0959050-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.66|1|1|0|0.25|4|388|58
chr6_3 exon 75409698 75409728 75409698 ID=Msa0959050-mRNA-1:exon:13481;Parent=Msa0959050-mRNA-1
chr6_3 exon 75409856 75409940 75409856 ID=Msa0959050-mRNA-1:exon:13482;Parent=Msa0959050-mRNA-1
chr6_3 exon 75410399 75410499 75410399 ID=Msa0959050-mRNA-1:exon:13483;Parent=Msa0959050-mRNA-1
chr6_3 exon 75411002 75411349 75411002 ID=Msa0959050-mRNA-1:exon:13484;Parent=Msa0959050-mRNA-1
chr6_3 CDS 75409698 75409728 75409698 ID=Msa0959050-mRNA-1:cds;Parent=Msa0959050-mRNA-1
chr6_3 CDS 75409856 75409940 75409856 ID=Msa0959050-mRNA-1:cds;Parent=Msa0959050-mRNA-1
chr6_3 CDS 75410399 75410459 75410399 ID=Msa0959050-mRNA-1:cds;Parent=Msa0959050-mRNA-1
chr6_3 three_prime_UTR 75410460 75410499 75410460 ID=Msa0959050-mRNA-1:three_prime_utr;Parent=Msa0959050-mRNA-1
chr6_3 three_prime_UTR 75411002 75411349 75411002 ID=Msa0959050-mRNA-1:three_prime_utr;Parent=Msa0959050-mRNA-1
Gene Sequence

>Msa0959050

CAGGTTTATCAGAATGGAGGCCTGCAAACTGGTGGTTCTCGTGTTGTTGACCATTCAAATTGCTTACTCAATTGCATCGATGAAGTTATTATGATAAAACAACTTGGAAATGTGAGATCATGTTTGAGGATGGTTGTGTTGAAATCTATGACATGTCAAAAGAAGAATGGGAATTAG
Protein sequence

>Msa0959050

QVYQNGGLQTGGSRVVDHSNCLLNCIDEVIMIKQLGNVRSCLRMVVLKSMTCQKKNGN*