Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699550 | XP_039685512.1 | 98.812 | 421 | 5 | 0 | 1 | 421 | 1 | 421 | 0.0 | 868 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699550 | sp|F4IPE3|IDD15_ARATH | 57.482 | 421 | 151 | 9 | 17 | 421 | 34 | 442 | 1.27e-163 | 470 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699550 | A0A396GMJ1 | 98.812 | 421 | 5 | 0 | 1 | 421 | 1 | 421 | 0.0 | 868 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0699550 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0699550 | 0.842073 | 3.230394e-58 | -8.615850e-47 |
| Msa0003700 | Msa0699550 | 0.808226 | 3.436541e-50 | -8.615850e-47 |
| Msa0012080 | Msa0699550 | 0.821675 | 3.559338e-53 | -8.615850e-47 |
| Msa0016670 | Msa0699550 | 0.828733 | 7.630779e-55 | -8.615850e-47 |
| Msa0017510 | Msa0699550 | 0.857547 | 1.514876e-62 | -8.615850e-47 |
| Msa0028640 | Msa0699550 | 0.839282 | 1.738940e-57 | -8.615850e-47 |
| Msa0032090 | Msa0699550 | 0.822396 | 2.423161e-53 | -8.615850e-47 |
| Msa0032430 | Msa0699550 | 0.808266 | 3.370227e-50 | -8.615850e-47 |
| Msa0032920 | Msa0699550 | -0.805223 | 1.481064e-49 | -8.615850e-47 |
| Msa0034270 | Msa0699550 | 0.818665 | 1.740729e-52 | -8.615850e-47 |
| Msa0040450 | Msa0699550 | 0.824152 | 9.424498e-54 | -8.615850e-47 |
| Msa0040690 | Msa0699550 | 0.806445 | 8.198292e-50 | -8.615850e-47 |
| Msa0046100 | Msa0699550 | 0.805042 | 1.615573e-49 | -8.615850e-47 |
| Msa0047050 | Msa0699550 | 0.809175 | 2.154857e-50 | -8.615850e-47 |
| Msa0072370 | Msa0699550 | 0.807735 | 4.370726e-50 | -8.615850e-47 |
| Msa0075220 | Msa0699550 | 0.800038 | 1.738020e-48 | -8.615850e-47 |
| Msa0076250 | Msa0699550 | 0.806857 | 6.709226e-50 | -8.615850e-47 |
| Msa0079380 | Msa0699550 | 0.818420 | 1.978177e-52 | -8.615850e-47 |
| Msa0081360 | Msa0699550 | 0.800815 | 1.207332e-48 | -8.615850e-47 |
| Msa0089630 | Msa0699550 | 0.821169 | 4.656782e-53 | -8.615850e-47 |
| Msa0094120 | Msa0699550 | 0.840001 | 1.130681e-57 | -8.615850e-47 |
| Msa0094140 | Msa0699550 | 0.833609 | 4.833519e-56 | -8.615850e-47 |
| Msa0110970 | Msa0699550 | 0.860859 | 1.539194e-63 | -8.615850e-47 |
| Msa0115160 | Msa0699550 | 0.805458 | 1.322205e-49 | -8.615850e-47 |
| Msa0615440 | Msa0699550 | 0.819740 | 9.909305e-53 | -8.615850e-47 |
| Msa0615590 | Msa0699550 | 0.831483 | 1.626807e-55 | -8.615850e-47 |
| Msa0616220 | Msa0699550 | 0.994253 | 9.080015e-206 | -8.615850e-47 |
| Msa0618040 | Msa0699550 | 0.806885 | 6.618194e-50 | -8.615850e-47 |
| Msa0620240 | Msa0699550 | 0.827651 | 1.390541e-54 | -8.615850e-47 |
| Msa0620990 | Msa0699550 | 0.806864 | 6.687684e-50 | -8.615850e-47 |
| Msa0621490 | Msa0699550 | 0.803233 | 3.844733e-49 | -8.615850e-47 |
| Msa0625720 | Msa0699550 | 0.808221 | 3.445048e-50 | -8.615850e-47 |
| Msa0639430 | Msa0699550 | 0.826649 | 2.415698e-54 | -8.615850e-47 |
| Msa0643220 | Msa0699550 | 0.810649 | 1.037641e-50 | -8.615850e-47 |
| Msa0650020 | Msa0699550 | 0.824750 | 6.813837e-54 | -8.615850e-47 |
| Msa0655690 | Msa0699550 | 0.848712 | 5.145339e-60 | -8.615850e-47 |
| Msa0657970 | Msa0699550 | 0.810758 | 9.831852e-51 | -8.615850e-47 |
| Msa0662500 | Msa0699550 | 0.810416 | 1.165305e-50 | -8.615850e-47 |
| Msa0663390 | Msa0699550 | 0.813880 | 2.045432e-51 | -8.615850e-47 |
| Msa0664610 | Msa0699550 | 0.806142 | 9.497233e-50 | -8.615850e-47 |
| Msa0682330 | Msa0699550 | 0.822687 | 2.073536e-53 | -8.615850e-47 |
| Msa0682900 | Msa0699550 | 0.803892 | 2.805597e-49 | -8.615850e-47 |
| Msa0683570 | Msa0699550 | 0.814026 | 1.899540e-51 | -8.615850e-47 |
| Msa0684500 | Msa0699550 | 0.816759 | 4.685429e-52 | -8.615850e-47 |
| Msa0691980 | Msa0699550 | 0.829940 | 3.885526e-55 | -8.615850e-47 |
| Msa0692080 | Msa0699550 | 0.810275 | 1.249855e-50 | -8.615850e-47 |
| Msa0698490 | Msa0699550 | 0.821261 | 4.435227e-53 | -8.615850e-47 |
| Msa0698660 | Msa0699550 | 0.826532 | 2.576539e-54 | -8.615850e-47 |
| Msa0698770 | Msa0699550 | 0.820587 | 6.339280e-53 | -8.615850e-47 |
| Msa0699550 | Msa0703230 | 0.803331 | 3.667781e-49 | -8.615850e-47 |
| Msa0699550 | Msa0708520 | 0.836627 | 8.377140e-57 | -8.615850e-47 |
| Msa0699550 | Msa0722960 | 0.800052 | 1.726587e-48 | -8.615850e-47 |
| Msa0699550 | Msa0727710 | 0.813446 | 2.549727e-51 | -8.615850e-47 |
| Msa0699550 | Msa0737570 | 0.803886 | 2.813703e-49 | -8.615850e-47 |
| Msa0699550 | Msa0738040 | 0.804318 | 2.288432e-49 | -8.615850e-47 |
| Msa0699550 | Msa0762970 | 0.802661 | 5.046686e-49 | -8.615850e-47 |
| Msa0699550 | Msa0763830 | 0.803711 | 3.060151e-49 | -8.615850e-47 |
| Msa0699550 | Msa0770720 | 0.825603 | 4.285172e-54 | -8.615850e-47 |
| Msa0699550 | Msa0785210 | 0.811997 | 5.289849e-51 | -8.615850e-47 |
| Msa0699550 | Msa0796530 | 0.837418 | 5.258786e-57 | -8.615850e-47 |
| Msa0699550 | Msa0813740 | 0.814563 | 1.445257e-51 | -8.615850e-47 |
| Msa0699550 | Msa0824660 | 0.825307 | 5.034500e-54 | -8.615850e-47 |
| Msa0699550 | Msa0828560 | 0.844286 | 8.307622e-59 | -8.615850e-47 |
| Msa0699550 | Msa0844240 | 0.805246 | 1.464630e-49 | -8.615850e-47 |
| Msa0699550 | Msa0850960 | 0.804667 | 1.935397e-49 | -8.615850e-47 |
| Msa0699550 | Msa0856920 | 0.816763 | 4.675518e-52 | -8.615850e-47 |
| Msa0699550 | Msa0861510 | 0.809281 | 2.044564e-50 | -8.615850e-47 |
| Msa0699550 | Msa0861530 | 0.800739 | 1.251338e-48 | -8.615850e-47 |
| Msa0699550 | Msa0861600 | 0.807811 | 4.211779e-50 | -8.615850e-47 |
| Msa0699550 | Msa0866520 | 0.810511 | 1.111318e-50 | -8.615850e-47 |
| Msa0699550 | Msa0867890 | 0.811102 | 8.281585e-51 | -8.615850e-47 |
| Msa0699550 | Msa0871270 | 0.813915 | 2.010237e-51 | -8.615850e-47 |
| Msa0699550 | Msa0876200 | 0.813898 | 2.027630e-51 | -8.615850e-47 |
| Msa0699550 | Msa0878500 | 0.801040 | 1.086087e-48 | -8.615850e-47 |
| Msa0699550 | Msa0880140 | 0.856971 | 2.242384e-62 | -8.615850e-47 |
| Msa0699550 | Msa0880440 | 0.814929 | 1.199106e-51 | -8.615850e-47 |
| Msa0699550 | Msa0902760 | 0.814687 | 1.357231e-51 | -8.615850e-47 |
| Msa0699550 | Msa0920610 | 0.808589 | 2.875027e-50 | -8.615850e-47 |
| Msa0699550 | Msa0938220 | 0.811143 | 8.113283e-51 | -8.615850e-47 |
| Msa0699550 | Msa0944190 | 0.812893 | 3.370561e-51 | -8.615850e-47 |
| Msa0699550 | Msa0947660 | 0.800540 | 1.373655e-48 | -8.615850e-47 |
| Msa0699550 | Msa0959050 | 0.801822 | 7.509794e-49 | -8.615850e-47 |
| Msa0699550 | Msa1003750 | 0.801542 | 8.573461e-49 | -8.615850e-47 |
| Msa0699550 | Msa1006840 | 0.810791 | 9.669712e-51 | -8.615850e-47 |
| Msa0699550 | Msa1007270 | 0.822430 | 2.378997e-53 | -8.615850e-47 |
| Msa0699550 | Msa1010110 | 0.814258 | 1.688633e-51 | -8.615850e-47 |
| Msa0699550 | Msa1013400 | 0.826247 | 3.011868e-54 | -8.615850e-47 |
| Msa0699550 | Msa1020670 | 0.817766 | 2.781393e-52 | -8.615850e-47 |
| Msa0699550 | Msa1031930 | 0.801037 | 1.087419e-48 | -8.615850e-47 |
| Msa0699550 | Msa1040400 | 0.806749 | 7.071233e-50 | -8.615850e-47 |
| Msa0699550 | Msa1046470 | 0.813505 | 2.474749e-51 | -8.615850e-47 |
| Msa0699550 | Msa1051830 | 0.811562 | 6.579890e-51 | -8.615850e-47 |
| Msa0699550 | Msa1074810 | 0.806555 | 7.770895e-50 | -8.615850e-47 |
| Msa0699550 | Msa1078170 | 0.806645 | 7.440259e-50 | -8.615850e-47 |
| Msa0699550 | Msa1081150 | 0.808021 | 3.801043e-50 | -8.615850e-47 |
| Msa0699550 | Msa1082500 | 0.807666 | 4.521094e-50 | -8.615850e-47 |
| Msa0699550 | Msa1085200 | 0.827317 | 1.672793e-54 | -8.615850e-47 |
| Msa0699550 | Msa1093530 | 0.813254 | 2.808677e-51 | -8.615850e-47 |
| Msa0699550 | Msa1097640 | 0.801895 | 7.254137e-49 | -8.615850e-47 |
| Msa0699550 | Msa1104140 | 0.805654 | 1.202739e-49 | -8.615850e-47 |
| Msa0699550 | Msa1104370 | 0.807080 | 6.020128e-50 | -8.615850e-47 |
| Msa0699550 | Msa1106700 | 0.813120 | 3.005772e-51 | -8.615850e-47 |
| Msa0699550 | Msa1108160 | 0.808095 | 3.665751e-50 | -8.615850e-47 |
| Msa0699550 | Msa1111110 | 0.814757 | 1.309714e-51 | -8.615850e-47 |
| Msa0699550 | Msa1111130 | 0.802178 | 6.347078e-49 | -8.615850e-47 |
| Msa0699550 | Msa1121440 | 0.805651 | 1.204368e-49 | -8.615850e-47 |
| Msa0699550 | Msa1123380 | 0.802231 | 6.189063e-49 | -8.615850e-47 |
| Msa0699550 | Msa1124110 | 0.805977 | 1.028449e-49 | -8.615850e-47 |
| Msa0699550 | Msa1127890 | 0.812777 | 3.574795e-51 | -8.615850e-47 |
| Msa0699550 | Msa1128710 | 0.801541 | 8.575210e-49 | -8.615850e-47 |
| Msa0699550 | Msa1133000 | 0.825277 | 5.116352e-54 | -8.615850e-47 |
| Msa0699550 | Msa1139810 | 0.829378 | 5.321841e-55 | -8.615850e-47 |
| Msa0699550 | Msa1140210 | 0.823620 | 1.255495e-53 | -8.615850e-47 |
| Msa0699550 | Msa1147900 | 0.833851 | 4.206131e-56 | -8.615850e-47 |
| Msa0699550 | Msa1151910 | 0.817949 | 2.529244e-52 | -8.615850e-47 |
| Msa0699550 | Msa1154710 | 0.800478 | 1.414351e-48 | -8.615850e-47 |
| Msa0699550 | Msa1168950 | 0.806801 | 6.896299e-50 | -8.615850e-47 |
| Msa0699550 | Msa1171710 | 0.801182 | 1.015993e-48 | -8.615850e-47 |
| Msa0699550 | Msa1182860 | 0.800469 | 1.420511e-48 | -8.615850e-47 |
| Msa0699550 | Msa1201650 | 0.817506 | 3.183997e-52 | -8.615850e-47 |
| Msa0699550 | Msa1203250 | 0.804916 | 1.716578e-49 | -8.615850e-47 |
| Msa0699550 | Msa1209460 | 0.852350 | 4.891011e-61 | -8.615850e-47 |
| Msa0699550 | Msa1218600 | 0.826470 | 2.666253e-54 | -8.615850e-47 |
| Msa0699550 | Msa1222850 | 0.806204 | 9.213574e-50 | -8.615850e-47 |
| Msa0699550 | Msa1231550 | 0.807686 | 4.478172e-50 | -8.615850e-47 |
| Msa0699550 | Msa1242240 | 0.809976 | 1.449776e-50 | -8.615850e-47 |
| Msa0699550 | Msa1252190 | 0.821674 | 3.560582e-53 | -8.615850e-47 |
| Msa0699550 | Msa1254610 | 0.807425 | 5.086272e-50 | -8.615850e-47 |
| Msa0699550 | Msa1264020 | 0.808732 | 2.680595e-50 | -8.615850e-47 |
| Msa0699550 | Msa1270610 | 0.800588 | 1.342973e-48 | -8.615850e-47 |
| Msa0699550 | Msa1271990 | 0.803328 | 3.672931e-49 | -8.615850e-47 |
| Msa0699550 | Msa1272900 | 0.811078 | 8.379549e-51 | -8.615850e-47 |
| Msa0699550 | Msa1280420 | 0.820613 | 6.252177e-53 | -8.615850e-47 |
| Msa0699550 | Msa1283840 | 0.809123 | 2.210881e-50 | -8.615850e-47 |
| Msa0699550 | Msa1283860 | 0.809334 | 1.991494e-50 | -8.615850e-47 |
| Msa0699550 | Msa1284260 | 0.821275 | 4.403579e-53 | -8.615850e-47 |
| Msa0699550 | Msa1292830 | 0.821639 | 3.627690e-53 | -8.615850e-47 |
| Msa0699550 | Msa1298820 | 0.825068 | 5.732570e-54 | -8.615850e-47 |
| Msa0699550 | Msa1303250 | 0.810828 | 9.492755e-51 | -8.615850e-47 |
| Msa0699550 | Msa1316780 | 0.800026 | 1.748399e-48 | -8.615850e-47 |
| Msa0699550 | Msa1319650 | 0.812356 | 4.417148e-51 | -8.615850e-47 |
| Msa0699550 | Msa1324550 | 0.803715 | 3.054227e-49 | -8.615850e-47 |
| Msa0699550 | Msa1327050 | 0.817202 | 3.727377e-52 | -8.615850e-47 |
| Msa0699550 | Msa1330410 | 0.832864 | 7.411470e-56 | -8.615850e-47 |
| Msa0699550 | Msa1343070 | 0.834071 | 3.703683e-56 | -8.615850e-47 |
| Msa0699550 | Msa1346370 | 0.819672 | 1.026939e-52 | -8.615850e-47 |
| Msa0699550 | Msa1366600 | 0.820319 | 7.303263e-53 | -8.615850e-47 |
| Msa0699550 | Msa1367370 | 0.819314 | 1.239682e-52 | -8.615850e-47 |
| Msa0699550 | Msa1370010 | 0.820249 | 7.578297e-53 | -8.615850e-47 |
| Msa0699550 | Msa1374120 | 0.812385 | 4.353734e-51 | -8.615850e-47 |
| Msa0699550 | Msa1374550 | 0.806609 | 7.570542e-50 | -8.615850e-47 |
| Msa0699550 | Msa1375560 | 0.806400 | 8.379773e-50 | -8.615850e-47 |
| Msa0699550 | Msa1409870 | 0.808957 | 2.398835e-50 | -8.615850e-47 |
| Msa0699550 | Msa1415640 | 0.825135 | 5.529692e-54 | -8.615850e-47 |
| Msa0699550 | Msa1416150 | 0.802774 | 4.781589e-49 | -8.615850e-47 |
| Msa0699550 | Msa1417420 | 0.820433 | 6.877493e-53 | -8.615850e-47 |
| Msa0699550 | Msa1417870 | 0.843758 | 1.151019e-58 | -8.615850e-47 |
| Msa0699550 | Msa1423350 | 0.837135 | 6.215581e-57 | -8.615850e-47 |
| Msa0699550 | Msa1443110 | 0.813055 | 3.106815e-51 | -8.615850e-47 |
| Msa0699550 | Msa1448690 | 0.800904 | 1.157707e-48 | -8.615850e-47 |
| Msa0699550 | Msa1451160 | 0.807813 | 4.207063e-50 | -8.615850e-47 |
| Msa0699550 | Msa1457440 | 0.801996 | 6.918657e-49 | -8.615850e-47 |
| Msa0699550 | Msa1459380 | 0.817418 | 3.331462e-52 | -8.615850e-47 |
| Msa0699550 | Msa1460020 | 0.819923 | 9.001051e-53 | -8.615850e-47 |
| Msa0699550 | Msa1461300 | 0.807995 | 3.848964e-50 | -8.615850e-47 |
| Msa0699550 | Msa1464810 | 0.819105 | 1.382908e-52 | -8.615850e-47 |
| Msa0124280 | Msa0699550 | 0.813583 | 2.378847e-51 | -8.615850e-47 |
| Msa0124340 | Msa0699550 | 0.838426 | 2.896600e-57 | -8.615850e-47 |
| Msa0136070 | Msa0699550 | 0.808772 | 2.627596e-50 | -8.615850e-47 |
| Msa0136100 | Msa0699550 | 0.802444 | 5.594086e-49 | -8.615850e-47 |
| Msa0140570 | Msa0699550 | 0.840093 | 1.070183e-57 | -8.615850e-47 |
| Msa0157290 | Msa0699550 | 0.857745 | 1.324303e-62 | -8.615850e-47 |
| Msa0163980 | Msa0699550 | 0.813764 | 2.170336e-51 | -8.615850e-47 |
| Msa0165220 | Msa0699550 | 0.802105 | 6.570811e-49 | -8.615850e-47 |
| Msa0168500 | Msa0699550 | 0.808565 | 2.910171e-50 | -8.615850e-47 |
| Msa0172070 | Msa0699550 | 0.809252 | 2.074607e-50 | -8.615850e-47 |
| Msa0173660 | Msa0699550 | 0.809000 | 2.348435e-50 | -8.615850e-47 |
| Msa0173990 | Msa0699550 | 0.800107 | 1.682759e-48 | -8.615850e-47 |
| Msa0186890 | Msa0699550 | 0.807272 | 5.482111e-50 | -8.615850e-47 |
| Msa0192510 | Msa0699550 | 0.834798 | 2.433711e-56 | -8.615850e-47 |
| Msa0197930 | Msa0699550 | 0.807585 | 4.705381e-50 | -8.615850e-47 |
| Msa0200260 | Msa0699550 | 0.806566 | 7.730723e-50 | -8.615850e-47 |
| Msa0203030 | Msa0699550 | 0.800257 | 1.569100e-48 | -8.615850e-47 |
| Msa0222620 | Msa0699550 | 0.803304 | 3.715352e-49 | -8.615850e-47 |
| Msa0223690 | Msa0699550 | 0.816594 | 5.101955e-52 | -8.615850e-47 |
| Msa0225740 | Msa0699550 | 0.844562 | 7.000476e-59 | -8.615850e-47 |
| Msa0225760 | Msa0699550 | 0.832647 | 8.389618e-56 | -8.615850e-47 |
| Msa0366240 | Msa0699550 | 0.805591 | 1.239686e-49 | -8.615850e-47 |
| Msa0371110 | Msa0699550 | 0.821709 | 3.495198e-53 | -8.615850e-47 |
| Msa0376350 | Msa0699550 | 0.802414 | 5.674923e-49 | -8.615850e-47 |
| Msa0378720 | Msa0699550 | 0.821802 | 3.326177e-53 | -8.615850e-47 |
| Msa0381550 | Msa0699550 | 0.805793 | 1.124603e-49 | -8.615850e-47 |
| Msa0387510 | Msa0699550 | 0.819209 | 1.309861e-52 | -8.615850e-47 |
| Msa0392510 | Msa0699550 | 0.804061 | 2.588213e-49 | -8.615850e-47 |
| Msa0402650 | Msa0699550 | 0.811983 | 5.329264e-51 | -8.615850e-47 |
| Msa0410500 | Msa0699550 | 0.831474 | 1.635735e-55 | -8.615850e-47 |
| Msa0410650 | Msa0699550 | 0.829289 | 5.595453e-55 | -8.615850e-47 |
| Msa0417270 | Msa0699550 | 0.816087 | 6.625846e-52 | -8.615850e-47 |
| Msa0417880 | Msa0699550 | 0.833008 | 6.826397e-56 | -8.615850e-47 |
| Msa0419820 | Msa0699550 | 0.819251 | 1.280989e-52 | -8.615850e-47 |
| Msa0432770 | Msa0699550 | 0.810405 | 1.171571e-50 | -8.615850e-47 |
| Msa0450720 | Msa0699550 | 0.803274 | 3.769019e-49 | -8.615850e-47 |
| Msa0464680 | Msa0699550 | 0.824732 | 6.880794e-54 | -8.615850e-47 |
| Msa0469030 | Msa0699550 | 0.813236 | 2.835635e-51 | -8.615850e-47 |
| Msa0475790 | Msa0699550 | 0.817365 | 3.425464e-52 | -8.615850e-47 |
| Msa0479170 | Msa0699550 | 0.819778 | 9.714247e-53 | -8.615850e-47 |
| Msa0480000 | Msa0699550 | 0.816408 | 5.616577e-52 | -8.615850e-47 |
| Msa0481530 | Msa0699550 | 0.805491 | 1.300970e-49 | -8.615850e-47 |
| Msa0243100 | Msa0699550 | 0.830984 | 2.158176e-55 | -8.615850e-47 |
| Msa0244860 | Msa0699550 | 0.817310 | 3.523849e-52 | -8.615850e-47 |
| Msa0248970 | Msa0699550 | 0.820674 | 6.056084e-53 | -8.615850e-47 |
| Msa0260610 | Msa0699550 | 0.838334 | 3.058773e-57 | -8.615850e-47 |
| Msa0260670 | Msa0699550 | 0.831427 | 1.679728e-55 | -8.615850e-47 |
| Msa0261340 | Msa0699550 | 0.829458 | 5.090663e-55 | -8.615850e-47 |
| Msa0264150 | Msa0699550 | 0.810074 | 1.380990e-50 | -8.615850e-47 |
| Msa0264870 | Msa0699550 | 0.831151 | 1.963891e-55 | -8.615850e-47 |
| Msa0268130 | Msa0699550 | 0.800346 | 1.504819e-48 | -8.615850e-47 |
| Msa0272690 | Msa0699550 | 0.815567 | 8.654339e-52 | -8.615850e-47 |
| Msa0283450 | Msa0699550 | 0.806908 | 6.543981e-50 | -8.615850e-47 |
| Msa0283520 | Msa0699550 | 0.830759 | 2.451226e-55 | -8.615850e-47 |
| Msa0287650 | Msa0699550 | 0.826786 | 2.240964e-54 | -8.615850e-47 |
| Msa0292400 | Msa0699550 | 0.849569 | 2.973135e-60 | -8.615850e-47 |
| Msa0300270 | Msa0699550 | 0.800476 | 1.415858e-48 | -8.615850e-47 |
| Msa0300690 | Msa0699550 | 0.810565 | 1.081990e-50 | -8.615850e-47 |
| Msa0309770 | Msa0699550 | 0.817710 | 2.863409e-52 | -8.615850e-47 |
| Msa0311860 | Msa0699550 | 0.811576 | 6.534555e-51 | -8.615850e-47 |
| Msa0332000 | Msa0699550 | 0.818167 | 2.257263e-52 | -8.615850e-47 |
| Msa0337620 | Msa0699550 | 0.807344 | 5.292723e-50 | -8.615850e-47 |
| Msa0339250 | Msa0699550 | 0.806854 | 6.718648e-50 | -8.615850e-47 |
| Msa0357990 | Msa0699550 | 0.802894 | 4.517932e-49 | -8.615850e-47 |
| Msa0362780 | Msa0699550 | 0.806933 | 6.465553e-50 | -8.615850e-47 |
| Msa0363070 | Msa0699550 | 0.837614 | 4.686253e-57 | -8.615850e-47 |
| Msa0363200 | Msa0699550 | 0.818066 | 2.379365e-52 | -8.615850e-47 |
| Msa0483860 | Msa0699550 | 0.829855 | 4.074420e-55 | -8.615850e-47 |
| Msa0485990 | Msa0699550 | 0.801276 | 9.720725e-49 | -8.615850e-47 |
| Msa0488560 | Msa0699550 | 0.808211 | 3.462082e-50 | -8.615850e-47 |
| Msa0498060 | Msa0699550 | 0.845295 | 4.438402e-59 | -8.615850e-47 |
| Msa0507680 | Msa0699550 | 0.831047 | 2.082339e-55 | -8.615850e-47 |
| Msa0509610 | Msa0699550 | 0.816789 | 4.613570e-52 | -8.615850e-47 |
| Msa0510980 | Msa0699550 | 0.820683 | 6.026633e-53 | -8.615850e-47 |
| Msa0516320 | Msa0699550 | 0.813257 | 2.805160e-51 | -8.615850e-47 |
| Msa0520070 | Msa0699550 | 0.814009 | 1.915733e-51 | -8.615850e-47 |
| Msa0524190 | Msa0699550 | 0.812015 | 5.243955e-51 | -8.615850e-47 |
| Msa0529890 | Msa0699550 | 0.802339 | 5.880292e-49 | -8.615850e-47 |
| Msa0532070 | Msa0699550 | 0.804427 | 2.171780e-49 | -8.615850e-47 |
| Msa0541860 | Msa0699550 | 0.804082 | 2.561766e-49 | -8.615850e-47 |
| Msa0546680 | Msa0699550 | 0.806343 | 8.612458e-50 | -8.615850e-47 |
| Msa0547360 | Msa0699550 | 0.811805 | 5.827054e-51 | -8.615850e-47 |
| Msa0548660 | Msa0699550 | 0.801943 | 7.092247e-49 | -8.615850e-47 |
| Msa0557070 | Msa0699550 | 0.805539 | 1.271238e-49 | -8.615850e-47 |
| Msa0562340 | Msa0699550 | 0.846705 | 1.836574e-59 | -8.615850e-47 |
| Msa0569200 | Msa0699550 | 0.815200 | 1.044207e-51 | -8.615850e-47 |
| Msa0571140 | Msa0699550 | 0.825697 | 4.070666e-54 | -8.615850e-47 |
| Msa0574890 | Msa0699550 | 0.821477 | 3.954998e-53 | -8.615850e-47 |
| Msa0585300 | Msa0699550 | 0.814408 | 1.564434e-51 | -8.615850e-47 |
| Msa0585560 | Msa0699550 | 0.808976 | 2.377088e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699550 | MtrunA17_Chr8g0375521 | 98.812 | 421 | 5 | 0 | 1 | 421 | 1 | 421 | 0.0 | 868 |
| Msa0699550 | MtrunA17_Chr6g0479921 | 58.499 | 453 | 126 | 11 | 16 | 418 | 17 | 457 | 3.65e-170 | 485 |
| Msa0699550 | MtrunA17_Chr1g0181381 | 64.103 | 156 | 55 | 1 | 27 | 182 | 38 | 192 | 1.62e-73 | 238 |
| Msa0699550 | MtrunA17_Chr1g0185121 | 65.385 | 156 | 53 | 1 | 27 | 182 | 40 | 194 | 3.71e-73 | 236 |
| Msa0699550 | MtrunA17_Chr1g0210821 | 45.669 | 254 | 133 | 4 | 30 | 280 | 47 | 298 | 7.28e-73 | 238 |
| Msa0699550 | MtrunA17_Chr7g0263941 | 59.116 | 181 | 66 | 3 | 8 | 182 | 9 | 187 | 1.05e-72 | 233 |
| Msa0699550 | MtrunA17_Chr8g0342421 | 64.103 | 156 | 54 | 2 | 27 | 182 | 62 | 215 | 4.92e-72 | 235 |
| Msa0699550 | MtrunA17_Chr8g0373541 | 57.143 | 189 | 67 | 4 | 2 | 182 | 4 | 186 | 1.37e-71 | 234 |
| Msa0699550 | MtrunA17_Chr2g0330171 | 63.462 | 156 | 55 | 2 | 27 | 182 | 46 | 199 | 2.84e-71 | 231 |
| Msa0699550 | MtrunA17_Chr2g0326381 | 62.179 | 156 | 58 | 1 | 27 | 182 | 32 | 186 | 3.98e-71 | 229 |
| Msa0699550 | MtrunA17_Chr1g0191991 | 64.744 | 156 | 53 | 2 | 27 | 182 | 63 | 216 | 6.79e-71 | 232 |
| Msa0699550 | MtrunA17_Chr1g0151351 | 61.392 | 158 | 60 | 1 | 27 | 184 | 41 | 197 | 1.01e-70 | 229 |
| Msa0699550 | MtrunA17_Chr4g0040571 | 64.103 | 156 | 54 | 2 | 27 | 182 | 39 | 192 | 2.78e-70 | 230 |
| Msa0699550 | MtrunA17_Chr1g0199101 | 60.897 | 156 | 59 | 2 | 27 | 182 | 47 | 200 | 3.40e-69 | 228 |
| Msa0699550 | MtrunA17_Chr4g0029521 | 60.256 | 156 | 61 | 1 | 27 | 182 | 38 | 192 | 3.97e-69 | 227 |
| Msa0699550 | MtrunA17_Chr1g0162971 | 59.615 | 156 | 61 | 2 | 27 | 182 | 41 | 194 | 3.49e-68 | 223 |
| Msa0699550 | MtrunA17_Chr1g0163001 | 61.538 | 156 | 58 | 2 | 27 | 182 | 43 | 196 | 3.94e-68 | 225 |
| Msa0699550 | MtrunA17_Chr7g0268961 | 67.123 | 146 | 46 | 2 | 37 | 182 | 32 | 175 | 4.29e-68 | 224 |
| Msa0699550 | MtrunA17_Chr3g0141431 | 58.974 | 156 | 63 | 1 | 27 | 182 | 22 | 176 | 3.93e-67 | 219 |
| Msa0699550 | MtrunA17_Chr2g0324991 | 65.414 | 133 | 44 | 2 | 38 | 170 | 3 | 133 | 8.81e-61 | 194 |
| Msa0699550 | MtrunA17_Chr2g0320341 | 33.974 | 156 | 89 | 4 | 36 | 178 | 224 | 378 | 7.30e-21 | 94.0 |
| Msa0699550 | MtrunA17_Chr3g0123941 | 37.107 | 159 | 80 | 6 | 33 | 178 | 114 | 265 | 2.95e-19 | 88.2 |
| Msa0699550 | MtrunA17_Chr8g0382121 | 35.714 | 154 | 88 | 5 | 35 | 178 | 104 | 256 | 2.27e-18 | 85.5 |
| Msa0699550 | MtrunA17_Chr1g0200421 | 32.215 | 149 | 89 | 5 | 41 | 178 | 236 | 383 | 5.14e-17 | 83.2 |
| Msa0699550 | MtrunA17_Chr4g0057391 | 34.884 | 86 | 56 | 0 | 311 | 396 | 58 | 143 | 9.38e-15 | 71.2 |
| Msa0699550 | MtrunA17_Chr8g0352011 | 32.394 | 142 | 85 | 5 | 48 | 181 | 171 | 309 | 2.96e-13 | 70.5 |
| Msa0699550 | MtrunA17_Chr1g0173841 | 29.891 | 184 | 106 | 7 | 3 | 178 | 187 | 355 | 3.02e-13 | 70.9 |
| Msa0699550 | MtrunA17_Chr7g0258011 | 30.986 | 142 | 87 | 5 | 48 | 181 | 181 | 319 | 7.05e-13 | 69.3 |
| Msa0699550 | MtrunA17_Chr4g0026521 | 30.935 | 139 | 85 | 5 | 48 | 178 | 123 | 258 | 7.85e-12 | 65.9 |
| Msa0699550 | MtrunA17_Chr1g0198651 | 27.374 | 179 | 114 | 6 | 15 | 181 | 74 | 248 | 3.15e-11 | 63.9 |
| Msa0699550 | MtrunA17_Chr2g0321291 | 30.216 | 139 | 86 | 5 | 48 | 178 | 138 | 273 | 3.30e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699550 | AT2G01940.1 | 57.482 | 421 | 151 | 9 | 17 | 421 | 34 | 442 | 1.29e-164 | 470 |
| Msa0699550 | AT2G01940.3 | 56.738 | 423 | 152 | 11 | 17 | 421 | 34 | 443 | 4.71e-159 | 456 |
| Msa0699550 | AT1G68130.1 | 56.553 | 412 | 132 | 10 | 21 | 419 | 34 | 411 | 9.59e-150 | 431 |
| Msa0699550 | AT1G25250.3 | 53.846 | 429 | 137 | 10 | 3 | 421 | 8 | 385 | 1.27e-145 | 420 |
| Msa0699550 | AT1G25250.1 | 54.315 | 394 | 120 | 9 | 37 | 421 | 20 | 362 | 5.50e-135 | 392 |
| Msa0699550 | AT2G01940.2 | 54.247 | 365 | 139 | 9 | 73 | 421 | 1 | 353 | 4.54e-127 | 371 |
| Msa0699550 | AT1G68130.2 | 52.113 | 355 | 132 | 8 | 73 | 419 | 1 | 325 | 4.60e-113 | 335 |
| Msa0699550 | AT1G25250.2 | 50.000 | 358 | 119 | 9 | 73 | 421 | 1 | 307 | 2.35e-106 | 317 |
| Msa0699550 | AT3G50700.1 | 56.757 | 185 | 74 | 3 | 2 | 182 | 5 | 187 | 6.66e-72 | 233 |
| Msa0699550 | AT5G66730.1 | 57.219 | 187 | 68 | 4 | 2 | 182 | 5 | 185 | 7.27e-71 | 232 |
| Msa0699550 | AT4G02670.2 | 49.569 | 232 | 95 | 4 | 27 | 243 | 55 | 279 | 3.06e-70 | 227 |
| Msa0699550 | AT4G02670.1 | 49.569 | 232 | 95 | 4 | 27 | 243 | 53 | 277 | 3.51e-70 | 227 |
| Msa0699550 | AT1G55110.3 | 61.538 | 156 | 59 | 1 | 27 | 182 | 63 | 217 | 9.93e-70 | 228 |
| Msa0699550 | AT1G55110.1 | 61.538 | 156 | 59 | 1 | 27 | 182 | 63 | 217 | 9.93e-70 | 228 |
| Msa0699550 | AT1G55110.2 | 61.538 | 156 | 59 | 1 | 27 | 182 | 63 | 217 | 9.93e-70 | 228 |
| Msa0699550 | AT3G45260.2 | 55.747 | 174 | 76 | 1 | 27 | 200 | 39 | 211 | 1.03e-69 | 227 |
| Msa0699550 | AT3G45260.1 | 55.747 | 174 | 76 | 1 | 27 | 200 | 39 | 211 | 1.03e-69 | 227 |
| Msa0699550 | AT3G13810.6 | 62.821 | 156 | 57 | 1 | 27 | 182 | 51 | 205 | 2.80e-69 | 227 |
| Msa0699550 | AT3G13810.5 | 62.821 | 156 | 57 | 1 | 27 | 182 | 65 | 219 | 3.48e-69 | 228 |
| Msa0699550 | AT3G13810.4 | 62.821 | 156 | 57 | 1 | 27 | 182 | 70 | 224 | 3.52e-69 | 228 |
| Msa0699550 | AT3G13810.1 | 62.821 | 156 | 57 | 1 | 27 | 182 | 70 | 224 | 3.52e-69 | 228 |
| Msa0699550 | AT5G60470.2 | 54.098 | 183 | 83 | 1 | 27 | 209 | 44 | 225 | 3.58e-69 | 226 |
| Msa0699550 | AT5G60470.3 | 54.098 | 183 | 83 | 1 | 27 | 209 | 40 | 221 | 3.92e-69 | 226 |
| Msa0699550 | AT2G02080.1 | 55.307 | 179 | 75 | 3 | 27 | 202 | 54 | 230 | 4.19e-69 | 228 |
| Msa0699550 | AT2G02080.4 | 55.307 | 179 | 75 | 3 | 27 | 202 | 54 | 230 | 4.19e-69 | 228 |
| Msa0699550 | AT2G02080.5 | 55.307 | 179 | 75 | 3 | 27 | 202 | 54 | 230 | 4.19e-69 | 228 |
| Msa0699550 | AT2G02080.3 | 55.307 | 179 | 75 | 3 | 27 | 202 | 54 | 230 | 4.19e-69 | 228 |
| Msa0699550 | AT5G03150.1 | 61.538 | 156 | 59 | 1 | 27 | 182 | 53 | 207 | 5.65e-69 | 227 |
| Msa0699550 | AT1G14580.1 | 58.974 | 156 | 62 | 2 | 27 | 182 | 53 | 206 | 2.65e-68 | 224 |
| Msa0699550 | AT1G14580.2 | 58.974 | 156 | 62 | 2 | 27 | 182 | 53 | 206 | 2.65e-68 | 224 |
| Msa0699550 | AT1G03840.1 | 63.462 | 156 | 55 | 2 | 27 | 182 | 41 | 194 | 3.00e-68 | 225 |
| Msa0699550 | AT1G14580.3 | 58.974 | 156 | 62 | 2 | 27 | 182 | 67 | 220 | 3.58e-68 | 224 |
| Msa0699550 | AT2G02070.2 | 61.538 | 156 | 58 | 2 | 27 | 182 | 52 | 205 | 1.05e-67 | 226 |
| Msa0699550 | AT2G02070.1 | 61.538 | 156 | 58 | 2 | 27 | 182 | 52 | 205 | 1.05e-67 | 226 |
| Msa0699550 | AT5G44160.1 | 49.302 | 215 | 97 | 5 | 27 | 236 | 37 | 244 | 2.20e-66 | 219 |
| Msa0699550 | AT3G13810.3 | 64.138 | 145 | 51 | 1 | 38 | 182 | 68 | 211 | 7.50e-65 | 216 |
| Msa0699550 | AT5G60470.1 | 54.070 | 172 | 78 | 1 | 38 | 209 | 46 | 216 | 8.53e-65 | 214 |
| Msa0699550 | AT3G13810.2 | 64.138 | 145 | 51 | 1 | 38 | 182 | 82 | 225 | 9.65e-65 | 216 |
| Msa0699550 | AT1G03840.2 | 62.179 | 156 | 55 | 3 | 27 | 182 | 41 | 192 | 1.02e-64 | 216 |
| Msa0699550 | AT5G44160.2 | 49.268 | 205 | 92 | 5 | 37 | 236 | 8 | 205 | 5.39e-63 | 209 |
| Msa0699550 | AT2G02080.6 | 53.205 | 156 | 68 | 3 | 51 | 203 | 1 | 154 | 2.25e-56 | 192 |
| Msa0699550 | AT2G02080.2 | 53.205 | 156 | 68 | 3 | 51 | 203 | 1 | 154 | 2.25e-56 | 192 |
| Msa0699550 | AT5G22890.1 | 32.335 | 167 | 94 | 7 | 26 | 178 | 190 | 351 | 6.33e-17 | 82.4 |
| Msa0699550 | AT1G34370.3 | 29.231 | 195 | 119 | 7 | 36 | 216 | 14 | 203 | 1.12e-16 | 80.5 |
| Msa0699550 | AT1G34370.2 | 29.231 | 195 | 119 | 7 | 36 | 216 | 224 | 413 | 1.23e-16 | 82.4 |
| Msa0699550 | AT1G34370.1 | 29.231 | 195 | 119 | 7 | 36 | 216 | 224 | 413 | 1.23e-16 | 82.4 |
| Msa0699550 | AT3G48550.1 | 30.058 | 173 | 90 | 5 | 226 | 393 | 11 | 157 | 7.67e-15 | 72.4 |
| Msa0699550 | AT3G57670.1 | 30.986 | 142 | 87 | 5 | 48 | 181 | 209 | 347 | 4.65e-12 | 67.8 |
Find 95 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTATGCATTTGAAGATTC+TGG | 0.162069 | 4_4:+70261441 | None:intergenic |
| AACAGGTTCTCTGAATTTAT+TGG | 0.193173 | 4_4:-70261786 | Msa0699550:five_prime_UTR |
| GTTCATATTCTTTATTAATA+TGG | 0.201980 | 4_4:-70258942 | Msa0699550:three_prime_UTR |
| TGTTTACTGTTTAGCACTTT+AGG | 0.204011 | 4_4:-70258905 | Msa0699550:three_prime_UTR |
| CAGTTTCAATCTTCAACTTC+TGG | 0.249687 | 4_4:-70259184 | Msa0699550:CDS |
| GTTTACTGTTTAGCACTTTA+GGG | 0.252219 | 4_4:-70258904 | Msa0699550:three_prime_UTR |
| AGGAATGAAGAGAGAGAAAA+AGG | 0.277026 | 4_4:+70261925 | None:intergenic |
| AATGGTTTATCAGGTGGTTT+TGG | 0.294809 | 4_4:+70259667 | None:intergenic |
| TTGAGTTTGAAAATGCTAAA+AGG | 0.314430 | 4_4:-70259318 | Msa0699550:CDS |
| AGAAGAAACATCCATTGTTA+TGG | 0.316252 | 4_4:-70259152 | Msa0699550:CDS |
| TCTGATTCTAACAAAGTCTT+TGG | 0.339052 | 4_4:+70261506 | None:intergenic |
| CTAAAATTTGCCTCACTAGA+TGG | 0.342793 | 4_4:+70259724 | None:intergenic |
| TTAATTTACAATAAGTCATA+TGG | 0.369490 | 4_4:-70259038 | Msa0699550:three_prime_UTR |
| GGTGCTGATAATGGTTTATC+AGG | 0.373734 | 4_4:+70259658 | None:intergenic |
| GAAGATAAGTAACACTGTTA+TGG | 0.384215 | 4_4:-70259233 | Msa0699550:CDS |
| TGATGCAAACAACTTGGTTC+TGG | 0.390697 | 4_4:+70261344 | None:intergenic |
| GAAGAAACATCCATTGTTAT+GGG | 0.391163 | 4_4:-70259151 | Msa0699550:CDS |
| AGAAAGATGATAGGTGATAA+TGG | 0.391803 | 4_4:+70261882 | None:intergenic |
| ACACACTTGAAACTTTCAAT+AGG | 0.397442 | 4_4:-70259499 | Msa0699550:CDS |
| ATTGTTGTTGCTTGGAACTC+TGG | 0.397896 | 4_4:+70259787 | None:intergenic |
| CAGGCTGCATTGTTGTTGCT+TGG | 0.402771 | 4_4:+70259779 | None:intergenic |
| AACAAGGTAGGTGCTGATAA+TGG | 0.405416 | 4_4:+70259649 | None:intergenic |
| ATGTTACCTGGTGTGCCTGC+TGG | 0.413494 | 4_4:+70261629 | None:intergenic |
| GAAACTGTTGCTTACAAGCT+TGG | 0.418931 | 4_4:+70259200 | None:intergenic |
| AATTAAAGATGATATATTGC+TGG | 0.423127 | 4_4:-70259066 | Msa0699550:three_prime_UTR |
| TGTATTACTTGAAGAAGAAA+AGG | 0.432708 | 4_4:-70258964 | Msa0699550:three_prime_UTR |
| TCTGGTCTCTTTGAAACCCT+TGG | 0.440797 | 4_4:+70261459 | None:intergenic |
| AGAGACACAACTTCAGCATC+TGG | 0.455957 | 4_4:+70261533 | None:intergenic |
| AGAGTTGAAGTTCTAAGTTA+TGG | 0.456212 | 4_4:+70259581 | None:intergenic |
| AAAGTTGGCAATGGCAGAAA+AGG | 0.462255 | 4_4:-70259395 | Msa0699550:CDS |
| ACAATGGATGTTTCTTCTGA+TGG | 0.469771 | 4_4:+70259157 | None:intergenic |
| TTCCCCTTCTGTGGTGGCTG+AGG | 0.471434 | 4_4:+70259120 | None:intergenic |
| GTACTGTACCTCACTGCAAC+AGG | 0.481858 | 4_4:-70261803 | Msa0699550:five_prime_UTR |
| TTCTGCTTCCCCTTCTGTGG+TGG | 0.491783 | 4_4:+70259114 | None:intergenic |
| TTGTTGCTTGGAACTCTGGT+TGG | 0.493027 | 4_4:+70259791 | None:intergenic |
| TTCGTTGAAAGAAAGATGAT+AGG | 0.498716 | 4_4:+70261873 | None:intergenic |
| AGTATATCAGCACCATTACA+AGG | 0.504067 | 4_4:-70259703 | Msa0699550:CDS |
| ACATAGTAATCATAAACAAT+GGG | 0.505280 | 4_4:-70261264 | Msa0699550:CDS |
| GTTTGTGAGATCTGTAACCA+AGG | 0.507755 | 4_4:-70261476 | Msa0699550:CDS |
| TACTAGTGAGGAGCTAAAGT+TGG | 0.509569 | 4_4:-70259410 | Msa0699550:CDS |
| GTGAAGTTTGTAATAGTGAG+TGG | 0.510773 | 4_4:+70261837 | None:intergenic |
| CAAAGAAAAGCTCGTGGCAA+AGG | 0.515637 | 4_4:-70262012 | Msa0699550:five_prime_UTR |
| AGAAGACCAGCAGGCACACC+AGG | 0.525697 | 4_4:-70261635 | Msa0699550:intron |
| AAACAAGCACAAGATGAACT+TGG | 0.527243 | 4_4:-70259289 | Msa0699550:CDS |
| ACTTGAGGGTTTATAGAGGA+AGG | 0.528633 | 4_4:+70259556 | None:intergenic |
| TCATTCTGCTTCCCCTTCTG+TGG | 0.531823 | 4_4:+70259111 | None:intergenic |
| AACATAGTAATCATAAACAA+TGG | 0.531879 | 4_4:-70261265 | Msa0699550:CDS |
| ATTAACTGTGTTATCTAACA+TGG | 0.533403 | 4_4:+70261724 | None:intergenic |
| TTTGAAAGAGTTTACTAGTG+AGG | 0.537749 | 4_4:-70259422 | Msa0699550:CDS |
| CATGATCCATGTCATGCACT+AGG | 0.544901 | 4_4:-70261323 | Msa0699550:CDS |
| TTCTACTTGAGGGTTTATAG+AGG | 0.552798 | 4_4:+70259552 | None:intergenic |
| TTTGTGAGATCTGTAACCAA+GGG | 0.553552 | 4_4:-70261475 | Msa0699550:CDS |
| GCTGATAATGGTTTATCAGG+TGG | 0.558635 | 4_4:+70259661 | None:intergenic |
| GTTGAAGTTCTAAGTTATGG+TGG | 0.560774 | 4_4:+70259584 | None:intergenic |
| ATGTCCTCAGCCACCACAGA+AGG | 0.565952 | 4_4:-70259124 | Msa0699550:CDS |
| GGATCATGATGCAAACAACT+TGG | 0.569323 | 4_4:+70261338 | None:intergenic |
| AGAGGACATTCGTGTGATTG+TGG | 0.573870 | 4_4:-70261170 | Msa0699550:CDS |
| CATGCACTAGGTGACCTTGT+TGG | 0.575089 | 4_4:-70261311 | Msa0699550:CDS |
| GTTATGGTGGTGATGAGAAG+TGG | 0.575098 | 4_4:+70259597 | None:intergenic |
| ACAATCACACGAATGTCCTC+TGG | 0.575624 | 4_4:+70261172 | None:intergenic |
| TGATAATGCAAAAGCAGTAG+TGG | 0.577782 | 4_4:+70261688 | None:intergenic |
| GTTATCTAACATGGGTGGAG+TGG | 0.580079 | 4_4:+70261733 | None:intergenic |
| TTTACTGTTTAGCACTTTAG+GGG | 0.583128 | 4_4:-70258903 | Msa0699550:three_prime_UTR |
| GCAGTGAGGTACAGTACAGC+TGG | 0.584238 | 4_4:+70261809 | None:intergenic |
| TGTCCTCAGCCACCACAGAA+GGG | 0.586753 | 4_4:-70259123 | Msa0699550:CDS |
| GTTTGTGACAAATGCAACAA+AGG | 0.587309 | 4_4:-70261242 | Msa0699550:CDS |
| GAAGAAGACACAAAGTGCCA+TGG | 0.587753 | 4_4:-70261421 | Msa0699550:CDS |
| TCTGAATTAGTTAACAAGGT+AGG | 0.590831 | 4_4:+70259637 | None:intergenic |
| AGCAGTAGTGGCATCAGAAG+AGG | 0.593577 | 4_4:+70261700 | None:intergenic |
| TGAAGTTTGTAATAGTGAGT+GGG | 0.595307 | 4_4:+70261838 | None:intergenic |
| ATAATGAGTCAGAGAAACAA+AGG | 0.608502 | 4_4:-70259474 | Msa0699550:CDS |
| AGCACTGGTAATCCTTGTAA+TGG | 0.609934 | 4_4:+70259691 | None:intergenic |
| CAAACTTGCTAGTTCCAATG+TGG | 0.610019 | 4_4:+70259441 | None:intergenic |
| TGTATCTGAATTAGTTAACA+AGG | 0.612656 | 4_4:+70259633 | None:intergenic |
| AAGGAATGATGTATCCACAT+TGG | 0.613625 | 4_4:-70259455 | Msa0699550:CDS |
| GTCCTCAGCCACCACAGAAG+GGG | 0.615788 | 4_4:-70259122 | Msa0699550:CDS |
| TGAGGAGCTAAAGTTGGCAA+TGG | 0.615902 | 4_4:-70259404 | Msa0699550:CDS |
| TTAACTGTGTTATCTAACAT+GGG | 0.627719 | 4_4:+70261725 | None:intergenic |
| CAAGACGCATGCACAATCAG+AGG | 0.629083 | 4_4:-70259820 | Msa0699550:CDS |
| ATCAAAACATGTGGTACCAG+AGG | 0.630022 | 4_4:-70261188 | Msa0699550:CDS |
| GCAGTTCTAGAAGAACATGC+AGG | 0.635627 | 4_4:+70259760 | None:intergenic |
| AGGTACAGTACAGCTGGTGG+TGG | 0.644840 | 4_4:+70261815 | None:intergenic |
| TCTCTGACAGCTATTGAACA+AGG | 0.646656 | 4_4:-70258871 | Msa0699550:three_prime_UTR |
| TGGTGGTGATGAGAAGTGGA+AGG | 0.646826 | 4_4:+70259601 | None:intergenic |
| AAAGCACATATCAAAACATG+TGG | 0.657146 | 4_4:-70261197 | Msa0699550:CDS |
| AAGCACAAGTCCATCTAGTG+AGG | 0.660327 | 4_4:-70259734 | Msa0699550:CDS |
| AATGTTTCTTGATTCCAACA+AGG | 0.660532 | 4_4:+70261297 | None:intergenic |
| AGGTCACCTAGTGCATGACA+TGG | 0.667882 | 4_4:+70261317 | None:intergenic |
| GGACATGTAACCCATAACAA+TGG | 0.669538 | 4_4:+70259141 | None:intergenic |
| ACTGTGTTATCTAACATGGG+TGG | 0.682813 | 4_4:+70261728 | None:intergenic |
| GCAAAGCAAAGAAAAGCTCG+TGG | 0.689460 | 4_4:-70262018 | Msa0699550:five_prime_UTR |
| TTTGCATTATCAGAAAATGG+GGG | 0.689769 | 4_4:-70261677 | Msa0699550:CDS |
| TTGAAAAGAGAAACAACACA+AGG | 0.699162 | 4_4:-70261392 | Msa0699550:CDS |
| TCAGAGAACCTGTTGCAGTG+AGG | 0.725813 | 4_4:+70261795 | None:intergenic |
| GTGAGGTACAGTACAGCTGG+TGG | 0.778381 | 4_4:+70261812 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAAATACTAATATTAATT+TGG | + | chr4_4:70259997-70260016 | None:intergenic | 10.0% |
| !!! | ATATTTAAATAGTACTATTT+TGG | - | chr4_4:70260188-70260207 | Msa0699550:intron | 10.0% |
| !! | ATCTAGTTATTAATATATAT+AGG | - | chr4_4:70260672-70260691 | Msa0699550:intron | 10.0% |
| !! | GTTAAAAAATAAAACTAAGT+TGG | + | chr4_4:70259337-70259356 | None:intergenic | 15.0% |
| !!! | CTCTCAAATATAAAATTTTA+GGG | + | chr4_4:70260086-70260105 | None:intergenic | 15.0% |
| !!! | ACTCTCAAATATAAAATTTT+AGG | + | chr4_4:70260087-70260106 | None:intergenic | 15.0% |
| !! | TGAGAATTTAATTACAAAAA+GGG | + | chr4_4:70260139-70260158 | None:intergenic | 15.0% |
| !! | ATGAGAATTTAATTACAAAA+AGG | + | chr4_4:70260140-70260159 | None:intergenic | 15.0% |
| !! | CTAATACTATTATAAGTTTA+TGG | - | chr4_4:70260365-70260384 | Msa0699550:intron | 15.0% |
| !! | AATTAATTAATCAAAGATCT+GGG | + | chr4_4:70260556-70260575 | None:intergenic | 15.0% |
| !! | AAATTAATTAATCAAAGATC+TGG | + | chr4_4:70260557-70260576 | None:intergenic | 15.0% |
| !! | TTTCATCTTAAAAAATAACA+TGG | + | chr4_4:70260604-70260623 | None:intergenic | 15.0% |
| !! | TTAATTTACAATAAGTCATA+TGG | - | chr4_4:70261876-70261895 | Msa0699550:five_prime_UTR | 15.0% |
| !! | AAAGAAAGAAAAAAAGAATA+GGG | + | chr4_4:70261912-70261931 | None:intergenic | 15.0% |
| !! | AAAAGAAAGAAAAAAAGAAT+AGG | + | chr4_4:70261913-70261932 | None:intergenic | 15.0% |
| !! | GTTCATATTCTTTATTAATA+TGG | - | chr4_4:70261972-70261991 | Msa0699550:five_prime_UTR | 15.0% |
| !!! | TATGAAATCAGCTTTTTTTA+AGG | + | chr4_4:70258958-70258977 | None:intergenic | 20.0% |
| !!! | TATTTTTTAACCTTGTTTTG+TGG | - | chr4_4:70259346-70259365 | Msa0699550:CDS | 20.0% |
| !!! | ATTTTTTAACCTTGTTTTGT+GGG | - | chr4_4:70259347-70259366 | Msa0699550:CDS | 20.0% |
| !! | AACATAGTAATCATAAACAA+TGG | - | chr4_4:70259649-70259668 | Msa0699550:CDS | 20.0% |
| !! | ACATAGTAATCATAAACAAT+GGG | - | chr4_4:70259650-70259669 | Msa0699550:CDS | 20.0% |
| !! | AATTAAATTCTCATCTTCTT+AGG | - | chr4_4:70260146-70260165 | Msa0699550:intron | 20.0% |
| !! | TATTGATAAAAAATGCAGAT+AGG | + | chr4_4:70260403-70260422 | None:intergenic | 20.0% |
| !!! | TTTTATCAATAAACCAAACA+AGG | - | chr4_4:70260412-70260431 | Msa0699550:intron | 20.0% |
| !!! | GTCAAATTATATTTTCATAC+AGG | - | chr4_4:70260837-70260856 | Msa0699550:intron | 20.0% |
| !! | AGTCAATAACCATATATTAT+AGG | + | chr4_4:70261026-70261045 | None:intergenic | 20.0% |
| !! | AATTAAAGATGATATATTGC+TGG | - | chr4_4:70261848-70261867 | Msa0699550:five_prime_UTR | 20.0% |
| ! | TTAACTGTGTTATCTAACAT+GGG | + | chr4_4:70259192-70259211 | None:intergenic | 25.0% |
| ! | ATTAACTGTGTTATCTAACA+TGG | + | chr4_4:70259193-70259212 | None:intergenic | 25.0% |
| !! | CTTTTGCATTATCAGAAAAT+GGG | - | chr4_4:70259235-70259254 | Msa0699550:CDS | 25.0% |
| !! | TTTTGCATTATCAGAAAATG+GGG | - | chr4_4:70259236-70259255 | Msa0699550:CDS | 25.0% |
| ! | TACAATAAAGATGGAAAACT+TGG | + | chr4_4:70259838-70259857 | None:intergenic | 25.0% |
| ! | GAAACTATCTACAATAAAGA+TGG | + | chr4_4:70259847-70259866 | None:intergenic | 25.0% |
| !! | TTTTCTCTCTCTTTCTTTTT+CGG | - | chr4_4:70259875-70259894 | Msa0699550:intron | 25.0% |
| ! | TAGTAGCTAATTAATGATAC+TGG | + | chr4_4:70260340-70260359 | None:intergenic | 25.0% |
| !!! | ATTCATTTTAGTACCTTGTT+TGG | + | chr4_4:70260428-70260447 | None:intergenic | 25.0% |
| ! | TAAGACAGAATGATCAAATA+GGG | + | chr4_4:70260490-70260509 | None:intergenic | 25.0% |
| ! | ATAAGACAGAATGATCAAAT+AGG | + | chr4_4:70260491-70260510 | None:intergenic | 25.0% |
| ! | TAAGATGAAATAGCTATAAC+AGG | - | chr4_4:70260614-70260633 | Msa0699550:intron | 25.0% |
| ! | TAATATATATAGGCCTTGAT+TGG | - | chr4_4:70260682-70260701 | Msa0699550:intron | 25.0% |
| ! | TGTATCTGAATTAGTTAACA+AGG | + | chr4_4:70261284-70261303 | None:intergenic | 25.0% |
| !!! | AATTTGGTTTTTCTACTTGA+GGG | + | chr4_4:70261375-70261394 | None:intergenic | 25.0% |
| !!! | TAGTTTTGATCGTTTGAATT+TGG | + | chr4_4:70261391-70261410 | None:intergenic | 25.0% |
| ! | TTGAGTTTGAAAATGCTAAA+AGG | - | chr4_4:70261596-70261615 | Msa0699550:intron | 25.0% |
| ! | TGTATTACTTGAAGAAGAAA+AGG | - | chr4_4:70261950-70261969 | Msa0699550:five_prime_UTR | 25.0% |
| ! | GATAATGGCAAAAAAACAGA+AGG | + | chr4_4:70259020-70259039 | None:intergenic | 30.0% |
| AGAAAGATGATAGGTGATAA+TGG | + | chr4_4:70259035-70259054 | None:intergenic | 30.0% | |
| TTCGTTGAAAGAAAGATGAT+AGG | + | chr4_4:70259044-70259063 | None:intergenic | 30.0% | |
| TGAAGTTTGTAATAGTGAGT+GGG | + | chr4_4:70259079-70259098 | None:intergenic | 30.0% | |
| AACAGGTTCTCTGAATTTAT+TGG | - | chr4_4:70259128-70259147 | Msa0699550:CDS | 30.0% | |
| ! | GCTTTTGCATTATCAGAAAA+TGG | - | chr4_4:70259234-70259253 | Msa0699550:CDS | 30.0% |
| TTTGCATTATCAGAAAATGG+GGG | - | chr4_4:70259237-70259256 | Msa0699550:CDS | 30.0% | |
| AATTTGTGTGATATGTTACC+TGG | + | chr4_4:70259300-70259319 | None:intergenic | 30.0% | |
| TCTGATTCTAACAAAGTCTT+TGG | + | chr4_4:70259411-70259430 | None:intergenic | 30.0% | |
| TTCTATGCATTTGAAGATTC+TGG | + | chr4_4:70259476-70259495 | None:intergenic | 30.0% | |
| ! | TCTCTTTTCAACAATTTCCA+TGG | + | chr4_4:70259513-70259532 | None:intergenic | 30.0% |
| TTGAAAAGAGAAACAACACA+AGG | - | chr4_4:70259522-70259541 | Msa0699550:CDS | 30.0% | |
| AATGTTTCTTGATTCCAACA+AGG | + | chr4_4:70259620-70259639 | None:intergenic | 30.0% | |
| AAAGCACATATCAAAACATG+TGG | - | chr4_4:70259717-70259736 | Msa0699550:CDS | 30.0% | |
| CAATATGAGAAAGTGAAAGA+TGG | + | chr4_4:70259806-70259825 | None:intergenic | 30.0% | |
| GTTCATCATTCATCAAATTC+AGG | - | chr4_4:70259932-70259951 | Msa0699550:intron | 30.0% | |
| ! | CAATTGACTGTGTTTGTTAA+CGG | - | chr4_4:70259968-70259987 | Msa0699550:intron | 30.0% |
| !! | GAAGACTTAATTTGTACTAG+TGG | - | chr4_4:70260461-70260480 | Msa0699550:intron | 30.0% |
| ACAAACTGTTTATCCAATCA+AGG | + | chr4_4:70260698-70260717 | None:intergenic | 30.0% | |
| ! | TTTTTACATGCTCTCTCAAA+CGG | - | chr4_4:70260947-70260966 | Msa0699550:intron | 30.0% |
| CCATATATTATAGGTCTGTT+TGG | + | chr4_4:70261017-70261036 | None:intergenic | 30.0% | |
| CCAAACAGACCTATAATATA+TGG | - | chr4_4:70261014-70261033 | Msa0699550:intron | 30.0% | |
| TTACATTTGCCCTTTGATTA+GGG | - | chr4_4:70261051-70261070 | Msa0699550:intron | 30.0% | |
| TCTGAATTAGTTAACAAGGT+AGG | + | chr4_4:70261280-70261299 | None:intergenic | 30.0% | |
| !! | AGAGTTGAAGTTCTAAGTTA+TGG | + | chr4_4:70261336-70261355 | None:intergenic | 30.0% |
| !!! | GAATTTGGTTTTTCTACTTG+AGG | + | chr4_4:70261376-70261395 | None:intergenic | 30.0% |
| ACACACTTGAAACTTTCAAT+AGG | - | chr4_4:70261415-70261434 | Msa0699550:CDS | 30.0% | |
| ATAATGAGTCAGAGAAACAA+AGG | - | chr4_4:70261440-70261459 | Msa0699550:CDS | 30.0% | |
| TTTGAAAGAGTTTACTAGTG+AGG | - | chr4_4:70261492-70261511 | Msa0699550:CDS | 30.0% | |
| GAAGATAAGTAACACTGTTA+TGG | - | chr4_4:70261681-70261700 | Msa0699550:CDS | 30.0% | |
| AGAAGAAACATCCATTGTTA+TGG | - | chr4_4:70261762-70261781 | Msa0699550:five_prime_UTR | 30.0% | |
| GAAGAAACATCCATTGTTAT+GGG | - | chr4_4:70261763-70261782 | Msa0699550:five_prime_UTR | 30.0% | |
| TGTTTACTGTTTAGCACTTT+AGG | - | chr4_4:70262009-70262028 | Msa0699550:five_prime_UTR | 30.0% | |
| GTTTACTGTTTAGCACTTTA+GGG | - | chr4_4:70262010-70262029 | Msa0699550:five_prime_UTR | 30.0% | |
| TTTACTGTTTAGCACTTTAG+GGG | - | chr4_4:70262011-70262030 | Msa0699550:five_prime_UTR | 30.0% | |
| AGGAATGAAGAGAGAGAAAA+AGG | + | chr4_4:70258992-70259011 | None:intergenic | 35.0% | |
| CAAAAAAACAGAAGGAGGAA+AGG | + | chr4_4:70259012-70259031 | None:intergenic | 35.0% | |
| AATGGCAAAAAAACAGAAGG+AGG | + | chr4_4:70259017-70259036 | None:intergenic | 35.0% | |
| GTGAAGTTTGTAATAGTGAG+TGG | + | chr4_4:70259080-70259099 | None:intergenic | 35.0% | |
| ! | TGATAATGCAAAAGCAGTAG+TGG | + | chr4_4:70259229-70259248 | None:intergenic | 35.0% |
| AAAAGAAAAAGAAGACCAGC+AGG | - | chr4_4:70259270-70259289 | Msa0699550:CDS | 35.0% | |
| TTTGTGAGATCTGTAACCAA+GGG | - | chr4_4:70259439-70259458 | Msa0699550:CDS | 35.0% | |
| GTTTGTGACAAATGCAACAA+AGG | - | chr4_4:70259672-70259691 | Msa0699550:CDS | 35.0% | |
| CGTTAACAAACACAGTCAAT+TGG | + | chr4_4:70259970-70259989 | None:intergenic | 35.0% | |
| !!! | ATTTTAGGGTTTGACTTCCT+AGG | + | chr4_4:70260072-70260091 | None:intergenic | 35.0% |
| !! | TTAATGATACTGGCTCTTAC+AGG | + | chr4_4:70260330-70260349 | None:intergenic | 35.0% |
| GTTACATTTGCCCTTTGATT+AGG | - | chr4_4:70261050-70261069 | Msa0699550:intron | 35.0% | |
| CTAAAATTTGCCTCACTAGA+TGG | + | chr4_4:70261193-70261212 | None:intergenic | 35.0% | |
| AGTATATCAGCACCATTACA+AGG | - | chr4_4:70261211-70261230 | Msa0699550:CDS | 35.0% | |
| ! | AATGGTTTATCAGGTGGTTT+TGG | + | chr4_4:70261250-70261269 | None:intergenic | 35.0% |
| !! | GTTGAAGTTCTAAGTTATGG+TGG | + | chr4_4:70261333-70261352 | None:intergenic | 35.0% |
| TTCTACTTGAGGGTTTATAG+AGG | + | chr4_4:70261365-70261384 | None:intergenic | 35.0% | |
| AAGGAATGATGTATCCACAT+TGG | - | chr4_4:70261459-70261478 | Msa0699550:CDS | 35.0% | |
| AAACAAGCACAAGATGAACT+TGG | - | chr4_4:70261625-70261644 | Msa0699550:intron | 35.0% | |
| CAGTTTCAATCTTCAACTTC+TGG | - | chr4_4:70261730-70261749 | Msa0699550:exon | 35.0% | |
| ACAATGGATGTTTCTTCTGA+TGG | + | chr4_4:70261760-70261779 | None:intergenic | 35.0% | |
| ACTGTGTTATCTAACATGGG+TGG | + | chr4_4:70259189-70259208 | None:intergenic | 40.0% | |
| CTAAACACACCCACAAAACA+AGG | + | chr4_4:70259359-70259378 | None:intergenic | 40.0% | |
| GTTTGTGAGATCTGTAACCA+AGG | - | chr4_4:70259438-70259457 | Msa0699550:CDS | 40.0% | |
| TGATGCAAACAACTTGGTTC+TGG | + | chr4_4:70259573-70259592 | None:intergenic | 40.0% | |
| GGATCATGATGCAAACAACT+TGG | + | chr4_4:70259579-70259598 | None:intergenic | 40.0% | |
| ATCAAAACATGTGGTACCAG+AGG | - | chr4_4:70259726-70259745 | Msa0699550:CDS | 40.0% | |
| AAGAAAGCAGAACACAAACC+TGG | + | chr4_4:70259781-70259800 | None:intergenic | 40.0% | |
| AAAGCCTGCATAATGATGAG+GGG | + | chr4_4:70260299-70260318 | None:intergenic | 40.0% | |
| CAAAGCCTGCATAATGATGA+GGG | + | chr4_4:70260300-70260319 | None:intergenic | 40.0% | |
| CAAACGGTTCAACAGTTCTT+AGG | - | chr4_4:70260963-70260982 | Msa0699550:intron | 40.0% | |
| ACAGTTCTTAGGACTGTAGT+AGG | - | chr4_4:70260974-70260993 | Msa0699550:intron | 40.0% | |
| AACTCTCCACCCTAATCAAA+GGG | + | chr4_4:70261063-70261082 | None:intergenic | 40.0% | |
| AAACTCTCCACCCTAATCAA+AGG | + | chr4_4:70261064-70261083 | None:intergenic | 40.0% | |
| ! | ATTGTTGTTGCTTGGAACTC+TGG | + | chr4_4:70261130-70261149 | None:intergenic | 40.0% |
| !! | AGCACTGGTAATCCTTGTAA+TGG | + | chr4_4:70261226-70261245 | None:intergenic | 40.0% |
| !! | GCTGATAATGGTTTATCAGG+TGG | + | chr4_4:70261256-70261275 | None:intergenic | 40.0% |
| !! | GGTGCTGATAATGGTTTATC+AGG | + | chr4_4:70261259-70261278 | None:intergenic | 40.0% |
| !! | AACAAGGTAGGTGCTGATAA+TGG | + | chr4_4:70261268-70261287 | None:intergenic | 40.0% |
| ACTTGAGGGTTTATAGAGGA+AGG | + | chr4_4:70261361-70261380 | None:intergenic | 40.0% | |
| !! | CAAACTTGCTAGTTCCAATG+TGG | + | chr4_4:70261476-70261495 | None:intergenic | 40.0% |
| TACTAGTGAGGAGCTAAAGT+TGG | - | chr4_4:70261504-70261523 | Msa0699550:CDS | 40.0% | |
| AAAGTTGGCAATGGCAGAAA+AGG | - | chr4_4:70261519-70261538 | Msa0699550:CDS | 40.0% | |
| ! | GAAACTGTTGCTTACAAGCT+TGG | + | chr4_4:70261717-70261736 | None:intergenic | 40.0% |
| GGACATGTAACCCATAACAA+TGG | + | chr4_4:70261776-70261795 | None:intergenic | 40.0% | |
| GCAAAGCAAAGAAAAGCTCG+TGG | - | chr4_4:70258896-70258915 | Msa0699550:three_prime_UTR | 45.0% | |
| CAAAGAAAAGCTCGTGGCAA+AGG | - | chr4_4:70258902-70258921 | Msa0699550:three_prime_UTR | 45.0% | |
| GTTATCTAACATGGGTGGAG+TGG | + | chr4_4:70259184-70259203 | None:intergenic | 45.0% | |
| AGAGACACAACTTCAGCATC+TGG | + | chr4_4:70259384-70259403 | None:intergenic | 45.0% | |
| !! | TCTGGTCTCTTTGAAACCCT+TGG | + | chr4_4:70259458-70259477 | None:intergenic | 45.0% |
| ! | GAAGAAGACACAAAGTGCCA+TGG | - | chr4_4:70259493-70259512 | Msa0699550:CDS | 45.0% |
| CATGATCCATGTCATGCACT+AGG | - | chr4_4:70259591-70259610 | Msa0699550:CDS | 45.0% | |
| ACAATCACACGAATGTCCTC+TGG | + | chr4_4:70259745-70259764 | None:intergenic | 45.0% | |
| AGAGGACATTCGTGTGATTG+TGG | - | chr4_4:70259744-70259763 | Msa0699550:CDS | 45.0% | |
| ! | ATTGTGGTCGTGTGTTTTCC+AGG | - | chr4_4:70259760-70259779 | Msa0699550:CDS | 45.0% |
| ! | TAGGGTTTGACTTCCTAGGA+AGG | + | chr4_4:70260068-70260087 | None:intergenic | 45.0% |
| AAGCCTGCATAATGATGAGG+GGG | + | chr4_4:70260298-70260317 | None:intergenic | 45.0% | |
| GCAAAGCCTGCATAATGATG+AGG | + | chr4_4:70260301-70260320 | None:intergenic | 45.0% | |
| AGATCTGGGTCATGACTCAT+GGG | + | chr4_4:70260542-70260561 | None:intergenic | 45.0% | |
| AAGATCTGGGTCATGACTCA+TGG | + | chr4_4:70260543-70260562 | None:intergenic | 45.0% | |
| CATTTGCCCTTTGATTAGGG+TGG | - | chr4_4:70261054-70261073 | Msa0699550:intron | 45.0% | |
| ! | TTGTTGCTTGGAACTCTGGT+TGG | + | chr4_4:70261126-70261145 | None:intergenic | 45.0% |
| !! | GCAGTTCTAGAAGAACATGC+AGG | + | chr4_4:70261157-70261176 | None:intergenic | 45.0% |
| AAGCACAAGTCCATCTAGTG+AGG | - | chr4_4:70261180-70261199 | Msa0699550:CDS | 45.0% | |
| ! | GTTATGGTGGTGATGAGAAG+TGG | + | chr4_4:70261320-70261339 | None:intergenic | 45.0% |
| TGAGGAGCTAAAGTTGGCAA+TGG | - | chr4_4:70261510-70261529 | Msa0699550:CDS | 45.0% | |
| GTACTGTACCTCACTGCAAC+AGG | - | chr4_4:70259111-70259130 | Msa0699550:CDS | 50.0% | |
| TCAGAGAACCTGTTGCAGTG+AGG | + | chr4_4:70259122-70259141 | None:intergenic | 50.0% | |
| AGCAGTAGTGGCATCAGAAG+AGG | + | chr4_4:70259217-70259236 | None:intergenic | 50.0% | |
| AGGTCACCTAGTGCATGACA+TGG | + | chr4_4:70259600-70259619 | None:intergenic | 50.0% | |
| CATGCACTAGGTGACCTTGT+TGG | - | chr4_4:70259603-70259622 | Msa0699550:CDS | 50.0% | |
| TGTGTGAGTGAGTGTGTGTG+TGG | - | chr4_4:70259910-70259929 | Msa0699550:intron | 50.0% | |
| TCTTCTGCAGCTACCTTCCT+AGG | - | chr4_4:70260052-70260071 | Msa0699550:intron | 50.0% | |
| ATAATGATGAGGGGGTGGGT+GGG | + | chr4_4:70260290-70260309 | None:intergenic | 50.0% | |
| CTGCATAATGATGAGGGGGT+GGG | + | chr4_4:70260294-70260313 | None:intergenic | 50.0% | |
| CAAGACGCATGCACAATCAG+AGG | - | chr4_4:70261094-70261113 | Msa0699550:intron | 50.0% | |
| ! | CAGGCTGCATTGTTGTTGCT+TGG | + | chr4_4:70261138-70261157 | None:intergenic | 50.0% |
| !!! | TCAGGTGGTTTTGGAAGCAC+TGG | + | chr4_4:70261241-70261260 | None:intergenic | 50.0% |
| ! | TGGTGGTGATGAGAAGTGGA+AGG | + | chr4_4:70261316-70261335 | None:intergenic | 50.0% |
| TCATTCTGCTTCCCCTTCTG+TGG | + | chr4_4:70261806-70261825 | None:intergenic | 50.0% | |
| AGGTACAGTACAGCTGGTGG+TGG | + | chr4_4:70259102-70259121 | None:intergenic | 55.0% | |
| GTGAGGTACAGTACAGCTGG+TGG | + | chr4_4:70259105-70259124 | None:intergenic | 55.0% | |
| GCAGTGAGGTACAGTACAGC+TGG | + | chr4_4:70259108-70259127 | None:intergenic | 55.0% | |
| ATGTTACCTGGTGTGCCTGC+TGG | + | chr4_4:70259288-70259307 | None:intergenic | 55.0% | |
| CATAATGATGAGGGGGTGGG+TGG | + | chr4_4:70260291-70260310 | None:intergenic | 55.0% | |
| CCTGCATAATGATGAGGGGG+TGG | + | chr4_4:70260295-70260314 | None:intergenic | 55.0% | |
| CCACCCCCTCATCATTATGC+AGG | - | chr4_4:70260292-70260311 | Msa0699550:intron | 55.0% | |
| ATGTCCTCAGCCACCACAGA+AGG | - | chr4_4:70261790-70261809 | Msa0699550:five_prime_UTR | 55.0% | |
| TGTCCTCAGCCACCACAGAA+GGG | - | chr4_4:70261791-70261810 | Msa0699550:five_prime_UTR | 55.0% | |
| TTCTGCTTCCCCTTCTGTGG+TGG | + | chr4_4:70261803-70261822 | None:intergenic | 55.0% | |
| AGAAGACCAGCAGGCACACC+AGG | - | chr4_4:70259279-70259298 | Msa0699550:CDS | 60.0% | |
| GTCCTCAGCCACCACAGAAG+GGG | - | chr4_4:70261792-70261811 | Msa0699550:five_prime_UTR | 60.0% | |
| TTCCCCTTCTGTGGTGGCTG+AGG | + | chr4_4:70261797-70261816 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 70258871 | 70262065 | 70258871 | ID=Msa0699550;Name=Msa0699550 |
| chr4_4 | mRNA | 70258871 | 70262065 | 70258871 | ID=Msa0699550-mRNA-1;Parent=Msa0699550;Name=Msa0699550-mRNA-1;_AED=0.01;_eAED=0.01;_QI=321|1|1|1|1|1|3|240|421 |
| chr4_4 | exon | 70258871 | 70259864 | 70258871 | ID=Msa0699550-mRNA-1:exon:21241;Parent=Msa0699550-mRNA-1 |
| chr4_4 | exon | 70261155 | 70261557 | 70261155 | ID=Msa0699550-mRNA-1:exon:21240;Parent=Msa0699550-mRNA-1 |
| chr4_4 | exon | 70261636 | 70262065 | 70261636 | ID=Msa0699550-mRNA-1:exon:21239;Parent=Msa0699550-mRNA-1 |
| chr4_4 | five_prime_UTR | 70261745 | 70262065 | 70261745 | ID=Msa0699550-mRNA-1:five_prime_utr;Parent=Msa0699550-mRNA-1 |
| chr4_4 | CDS | 70261636 | 70261744 | 70261636 | ID=Msa0699550-mRNA-1:cds;Parent=Msa0699550-mRNA-1 |
| chr4_4 | CDS | 70261155 | 70261557 | 70261155 | ID=Msa0699550-mRNA-1:cds;Parent=Msa0699550-mRNA-1 |
| chr4_4 | CDS | 70259111 | 70259864 | 70259111 | ID=Msa0699550-mRNA-1:cds;Parent=Msa0699550-mRNA-1 |
| chr4_4 | three_prime_UTR | 70258871 | 70259110 | 70258871 | ID=Msa0699550-mRNA-1:three_prime_utr;Parent=Msa0699550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
