Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1127650 | KEH24445.1 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 3.15e-42 | 152 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1127650 | A0A072UF85 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 1.50e-42 | 152 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004920 | Msa1127650 | 0.811597 | 6.466012e-51 | -8.615850e-47 |
Msa0017510 | Msa1127650 | 0.808105 | 3.646249e-50 | -8.615850e-47 |
Msa0020930 | Msa1127650 | 0.826576 | 2.514401e-54 | -8.615850e-47 |
Msa0036140 | Msa1127650 | 0.814608 | 1.413019e-51 | -8.615850e-47 |
Msa0040450 | Msa1127650 | 0.823747 | 1.172607e-53 | -8.615850e-47 |
Msa0051770 | Msa1127650 | 0.813130 | 2.991535e-51 | -8.615850e-47 |
Msa0068680 | Msa1127650 | 0.822726 | 2.030115e-53 | -8.615850e-47 |
Msa0077610 | Msa1127650 | 0.815143 | 1.075346e-51 | -8.615850e-47 |
Msa0077670 | Msa1127650 | 0.808740 | 2.669825e-50 | -8.615850e-47 |
Msa0078650 | Msa1127650 | 0.805451 | 1.326246e-49 | -8.615850e-47 |
Msa0084080 | Msa1127650 | 0.810550 | 1.090355e-50 | -8.615850e-47 |
Msa0089380 | Msa1127650 | 0.800562 | 1.359762e-48 | -8.615850e-47 |
Msa0110970 | Msa1127650 | 0.814386 | 1.581580e-51 | -8.615850e-47 |
Msa0114060 | Msa1127650 | 0.800742 | 1.249332e-48 | -8.615850e-47 |
Msa0616160 | Msa1127650 | 0.805871 | 1.082885e-49 | -8.615850e-47 |
Msa0617580 | Msa1127650 | 0.810169 | 1.317707e-50 | -8.615850e-47 |
Msa0631200 | Msa1127650 | 0.810483 | 1.127148e-50 | -8.615850e-47 |
Msa0638070 | Msa1127650 | 0.813188 | 2.904908e-51 | -8.615850e-47 |
Msa0657970 | Msa1127650 | 0.820708 | 5.945274e-53 | -8.615850e-47 |
Msa0667050 | Msa1127650 | 0.800131 | 1.663842e-48 | -8.615850e-47 |
Msa0669440 | Msa1127650 | 0.820734 | 5.863926e-53 | -8.615850e-47 |
Msa0683510 | Msa1127650 | 0.808508 | 2.992925e-50 | -8.615850e-47 |
Msa0687020 | Msa1127650 | 0.802752 | 4.832542e-49 | -8.615850e-47 |
Msa0689010 | Msa1127650 | 0.800358 | 1.496170e-48 | -8.615850e-47 |
Msa0692230 | Msa1127650 | 0.820305 | 7.357176e-53 | -8.615850e-47 |
Msa0693380 | Msa1127650 | 0.833705 | 4.573085e-56 | -8.615850e-47 |
Msa0695100 | Msa1127650 | 0.804482 | 2.114845e-49 | -8.615850e-47 |
Msa0708520 | Msa1127650 | 0.805868 | 1.084321e-49 | -8.615850e-47 |
Msa0711790 | Msa1127650 | 0.814355 | 1.607061e-51 | -8.615850e-47 |
Msa0737560 | Msa1127650 | 0.805860 | 1.088708e-49 | -8.615850e-47 |
Msa0740510 | Msa1127650 | 0.802934 | 4.432670e-49 | -8.615850e-47 |
Msa0744030 | Msa1127650 | 0.822475 | 2.322903e-53 | -8.615850e-47 |
Msa0744040 | Msa1127650 | 0.824036 | 1.003325e-53 | -8.615850e-47 |
Msa0754720 | Msa1127650 | -0.801099 | 1.056501e-48 | -8.615850e-47 |
Msa0756630 | Msa1127650 | -0.814628 | 1.398579e-51 | -8.615850e-47 |
Msa0760380 | Msa1127650 | 0.820266 | 7.510678e-53 | -8.615850e-47 |
Msa0767300 | Msa1127650 | 0.826699 | 2.351183e-54 | -8.615850e-47 |
Msa0784380 | Msa1127650 | 0.811837 | 5.733165e-51 | -8.615850e-47 |
Msa0795680 | Msa1127650 | 0.805662 | 1.198020e-49 | -8.615850e-47 |
Msa0796700 | Msa1127650 | 0.802263 | 6.096723e-49 | -8.615850e-47 |
Msa0804230 | Msa1127650 | 0.810312 | 1.227321e-50 | -8.615850e-47 |
Msa0820770 | Msa1127650 | 0.800613 | 1.327822e-48 | -8.615850e-47 |
Msa0824660 | Msa1127650 | 0.811229 | 7.772662e-51 | -8.615850e-47 |
Msa0829620 | Msa1127650 | 0.802389 | 5.742869e-49 | -8.615850e-47 |
Msa0830530 | Msa1127650 | 0.827833 | 1.257671e-54 | -8.615850e-47 |
Msa0840260 | Msa1127650 | 0.804049 | 2.603416e-49 | -8.615850e-47 |
Msa0124340 | Msa1127650 | 0.804593 | 2.005373e-49 | -8.615850e-47 |
Msa0135420 | Msa1127650 | 0.804068 | 2.580004e-49 | -8.615850e-47 |
Msa0157290 | Msa1127650 | 0.808216 | 3.452911e-50 | -8.615850e-47 |
Msa0159930 | Msa1127650 | 0.821242 | 4.481746e-53 | -8.615850e-47 |
Msa0166870 | Msa1127650 | 0.804788 | 1.826081e-49 | -8.615850e-47 |
Msa0179580 | Msa1127650 | 0.800140 | 1.656987e-48 | -8.615850e-47 |
Msa0184960 | Msa1127650 | 0.804516 | 2.081109e-49 | -8.615850e-47 |
Msa0191250 | Msa1127650 | 0.803128 | 4.041230e-49 | -8.615850e-47 |
Msa0197660 | Msa1127650 | 0.806402 | 8.369513e-50 | -8.615850e-47 |
Msa0212990 | Msa1127650 | 0.806671 | 7.346790e-50 | -8.615850e-47 |
Msa0220580 | Msa1127650 | 0.834842 | 2.371929e-56 | -8.615850e-47 |
Msa0232320 | Msa1127650 | 0.805151 | 1.532742e-49 | -8.615850e-47 |
Msa0369440 | Msa1127650 | 0.810998 | 8.721863e-51 | -8.615850e-47 |
Msa0370110 | Msa1127650 | 0.800739 | 1.251552e-48 | -8.615850e-47 |
Msa0373930 | Msa1127650 | 0.810672 | 1.026042e-50 | -8.615850e-47 |
Msa0376350 | Msa1127650 | 0.804019 | 2.640135e-49 | -8.615850e-47 |
Msa0398710 | Msa1127650 | 0.810735 | 9.944686e-51 | -8.615850e-47 |
Msa0398730 | Msa1127650 | 0.800707 | 1.270525e-48 | -8.615850e-47 |
Msa0410500 | Msa1127650 | 0.813695 | 2.247614e-51 | -8.615850e-47 |
Msa0410650 | Msa1127650 | 0.811307 | 7.475990e-51 | -8.615850e-47 |
Msa0412440 | Msa1127650 | 0.802979 | 4.337685e-49 | -8.615850e-47 |
Msa0414170 | Msa1127650 | 0.815627 | 8.392244e-52 | -8.615850e-47 |
Msa0417880 | Msa1127650 | 0.809249 | 2.077606e-50 | -8.615850e-47 |
Msa0423040 | Msa1127650 | 0.817708 | 2.865672e-52 | -8.615850e-47 |
Msa0424790 | Msa1127650 | 0.801934 | 7.123887e-49 | -8.615850e-47 |
Msa0433640 | Msa1127650 | 0.821109 | 4.807590e-53 | -8.615850e-47 |
Msa0440750 | Msa1127650 | 0.802634 | 5.111531e-49 | -8.615850e-47 |
Msa0452960 | Msa1127650 | 0.805333 | 1.404484e-49 | -8.615850e-47 |
Msa0453330 | Msa1127650 | 0.811441 | 6.989385e-51 | -8.615850e-47 |
Msa0456910 | Msa1127650 | 0.808278 | 3.350094e-50 | -8.615850e-47 |
Msa0479170 | Msa1127650 | 0.803197 | 3.910507e-49 | -8.615850e-47 |
Msa1046020 | Msa1127650 | 0.807647 | 4.564540e-50 | -8.615850e-47 |
Msa1046060 | Msa1127650 | 0.810222 | 1.283053e-50 | -8.615850e-47 |
Msa1063950 | Msa1127650 | 0.812067 | 5.107451e-51 | -8.615850e-47 |
Msa1079590 | Msa1127650 | 0.821162 | 4.674643e-53 | -8.615850e-47 |
Msa1082500 | Msa1127650 | 0.850053 | 2.177481e-60 | -8.615850e-47 |
Msa1085200 | Msa1127650 | 0.805609 | 1.229138e-49 | -8.615850e-47 |
Msa1085300 | Msa1127650 | 0.812151 | 4.898178e-51 | -8.615850e-47 |
Msa1097800 | Msa1127650 | 0.830622 | 2.648098e-55 | -8.615850e-47 |
Msa1097840 | Msa1127650 | 0.802239 | 6.164595e-49 | -8.615850e-47 |
Msa0239800 | Msa1127650 | 0.811408 | 7.105572e-51 | -8.615850e-47 |
Msa0243710 | Msa1127650 | 0.836537 | 8.828023e-57 | -8.615850e-47 |
Msa0244860 | Msa1127650 | 0.809174 | 2.155874e-50 | -8.615850e-47 |
Msa0260680 | Msa1127650 | 0.808276 | 3.352753e-50 | -8.615850e-47 |
Msa0265380 | Msa1127650 | 0.816316 | 5.890172e-52 | -8.615850e-47 |
Msa0283450 | Msa1127650 | 0.800285 | 1.548243e-48 | -8.615850e-47 |
Msa0287650 | Msa1127650 | 0.825461 | 4.627992e-54 | -8.615850e-47 |
Msa0292120 | Msa1127650 | 0.823969 | 1.040093e-53 | -8.615850e-47 |
Msa0299730 | Msa1127650 | 0.803425 | 3.507719e-49 | -8.615850e-47 |
Msa0303360 | Msa1127650 | 0.808954 | 2.402648e-50 | -8.615850e-47 |
Msa0309770 | Msa1127650 | 0.844510 | 7.231295e-59 | -8.615850e-47 |
Msa0311860 | Msa1127650 | 0.824720 | 6.927343e-54 | -8.615850e-47 |
Msa0317510 | Msa1127650 | 0.814610 | 1.411093e-51 | -8.615850e-47 |
Msa0330340 | Msa1127650 | 0.800388 | 1.475114e-48 | -8.615850e-47 |
Msa0335040 | Msa1127650 | 0.803844 | 2.870838e-49 | -8.615850e-47 |
Msa0345970 | Msa1127650 | 0.800536 | 1.376585e-48 | -8.615850e-47 |
Msa0347360 | Msa1127650 | 0.803489 | 3.402627e-49 | -8.615850e-47 |
Msa0351380 | Msa1127650 | 0.801662 | 8.101527e-49 | -8.615850e-47 |
Msa1108160 | Msa1127650 | 0.816045 | 6.770886e-52 | -8.615850e-47 |
Msa1111110 | Msa1127650 | 0.807132 | 5.869874e-50 | -8.615850e-47 |
Msa1115430 | Msa1127650 | 0.828519 | 8.595972e-55 | -8.615850e-47 |
Msa1124410 | Msa1127650 | 0.804872 | 1.753919e-49 | -8.615850e-47 |
Msa1127650 | Msa1127830 | 0.807532 | 4.827574e-50 | -8.615850e-47 |
Msa1127650 | Msa1131220 | 0.824815 | 6.579577e-54 | -8.615850e-47 |
Msa1127650 | Msa1151910 | 0.808661 | 2.776120e-50 | -8.615850e-47 |
Msa1127650 | Msa1165520 | 0.828691 | 7.809623e-55 | -8.615850e-47 |
Msa1127650 | Msa1168160 | 0.815317 | 9.835212e-52 | -8.615850e-47 |
Msa1127650 | Msa1171870 | 0.817415 | 3.336466e-52 | -8.615850e-47 |
Msa1127650 | Msa1172400 | 0.801762 | 7.724882e-49 | -8.615850e-47 |
Msa1127650 | Msa1185980 | 0.810793 | 9.660849e-51 | -8.615850e-47 |
Msa1127650 | Msa1194920 | 0.801799 | 7.591250e-49 | -8.615850e-47 |
Msa1127650 | Msa1197410 | 0.801538 | 8.589502e-49 | -8.615850e-47 |
Msa1127650 | Msa1203250 | 0.835180 | 1.949835e-56 | -8.615850e-47 |
Msa1127650 | Msa1204530 | 0.800260 | 1.566673e-48 | -8.615850e-47 |
Msa1127650 | Msa1214480 | 0.824304 | 8.677670e-54 | -8.615850e-47 |
Msa1127650 | Msa1214890 | 0.800969 | 1.123016e-48 | -8.615850e-47 |
Msa1127650 | Msa1228210 | 0.800952 | 1.131975e-48 | -8.615850e-47 |
Msa1127650 | Msa1233890 | 0.800165 | 1.637919e-48 | -8.615850e-47 |
Msa1127650 | Msa1240180 | 0.816831 | 4.515724e-52 | -8.615850e-47 |
Msa1127650 | Msa1240210 | 0.810070 | 1.383852e-50 | -8.615850e-47 |
Msa1127650 | Msa1240310 | 0.800076 | 1.707493e-48 | -8.615850e-47 |
Msa1127650 | Msa1255290 | 0.806630 | 7.492160e-50 | -8.615850e-47 |
Msa1127650 | Msa1264020 | 0.800605 | 1.332349e-48 | -8.615850e-47 |
Msa1127650 | Msa1270610 | 0.804776 | 1.836063e-49 | -8.615850e-47 |
Msa1127650 | Msa1278840 | 0.802954 | 4.390389e-49 | -8.615850e-47 |
Msa1127650 | Msa1283860 | 0.822793 | 1.958897e-53 | -8.615850e-47 |
Msa1127650 | Msa1306430 | 0.817973 | 2.498064e-52 | -8.615850e-47 |
Msa1127650 | Msa1306840 | 0.829619 | 4.651177e-55 | -8.615850e-47 |
Msa1127650 | Msa1308380 | 0.812333 | 4.469883e-51 | -8.615850e-47 |
Msa1127650 | Msa1314340 | 0.804676 | 1.926679e-49 | -8.615850e-47 |
Msa1127650 | Msa1320410 | 0.801569 | 8.463821e-49 | -8.615850e-47 |
Msa1127650 | Msa1320620 | 0.831767 | 1.385351e-55 | -8.615850e-47 |
Msa1127650 | Msa1331910 | 0.819739 | 9.916206e-53 | -8.615850e-47 |
Msa1127650 | Msa1340260 | 0.808958 | 2.397546e-50 | -8.615850e-47 |
Msa1127650 | Msa1342900 | 0.803223 | 3.861527e-49 | -8.615850e-47 |
Msa1127650 | Msa1343070 | 0.818638 | 1.766244e-52 | -8.615850e-47 |
Msa1127650 | Msa1351730 | 0.967274 | 4.719888e-127 | -8.615850e-47 |
Msa1127650 | Msa1353980 | 0.809239 | 2.087965e-50 | -8.615850e-47 |
Msa1127650 | Msa1357530 | 0.800912 | 1.153359e-48 | -8.615850e-47 |
Msa1127650 | Msa1366600 | 0.819143 | 1.356011e-52 | -8.615850e-47 |
Msa1127650 | Msa1367750 | 0.812496 | 4.118417e-51 | -8.615850e-47 |
Msa1127650 | Msa1384350 | 0.810423 | 1.161539e-50 | -8.615850e-47 |
Msa1127650 | Msa1385670 | 0.801897 | 7.248017e-49 | -8.615850e-47 |
Msa1127650 | Msa1386230 | 0.805401 | 1.358779e-49 | -8.615850e-47 |
Msa1127650 | Msa1389400 | 0.811450 | 6.958188e-51 | -8.615850e-47 |
Msa1127650 | Msa1392260 | 0.805844 | 1.096834e-49 | -8.615850e-47 |
Msa1127650 | Msa1404540 | 0.801575 | 8.440915e-49 | -8.615850e-47 |
Msa1127650 | Msa1409870 | 0.804315 | 2.291011e-49 | -8.615850e-47 |
Msa1127650 | Msa1414690 | 0.815329 | 9.773390e-52 | -8.615850e-47 |
Msa1127650 | Msa1415640 | 0.802009 | 6.874466e-49 | -8.615850e-47 |
Msa1127650 | Msa1420290 | 0.804570 | 2.027681e-49 | -8.615850e-47 |
Msa1127650 | Msa1424450 | 0.805144 | 1.538565e-49 | -8.615850e-47 |
Msa1127650 | Msa1429900 | 0.806191 | 9.274334e-50 | -8.615850e-47 |
Msa1127650 | Msa1436480 | 0.803003 | 4.288945e-49 | -8.615850e-47 |
Msa1127650 | Msa1443850 | 0.814662 | 1.374541e-51 | -8.615850e-47 |
Msa1127650 | Msa1445080 | 0.823543 | 1.308820e-53 | -8.615850e-47 |
Msa1127650 | Msa1459180 | 0.802884 | 4.537870e-49 | -8.615850e-47 |
Msa1127650 | Msa1460020 | 0.836074 | 1.157990e-56 | -8.615850e-47 |
Msa1127650 | Msa1460050 | 0.809193 | 2.135215e-50 | -8.615850e-47 |
Msa0484780 | Msa1127650 | 0.837665 | 4.545218e-57 | -8.615850e-47 |
Msa0500360 | Msa1127650 | 0.801043 | 1.084579e-48 | -8.615850e-47 |
Msa0505770 | Msa1127650 | 0.805658 | 1.200446e-49 | -8.615850e-47 |
Msa0507680 | Msa1127650 | 0.810991 | 8.754050e-51 | -8.615850e-47 |
Msa0509610 | Msa1127650 | 0.810858 | 9.350675e-51 | -8.615850e-47 |
Msa0512870 | Msa1127650 | 0.802824 | 4.669858e-49 | -8.615850e-47 |
Msa0521500 | Msa1127650 | 0.821628 | 3.649088e-53 | -8.615850e-47 |
Msa0521540 | Msa1127650 | 0.829499 | 4.976121e-55 | -8.615850e-47 |
Msa0526890 | Msa1127650 | 0.803950 | 2.729148e-49 | -8.615850e-47 |
Msa0563840 | Msa1127650 | 0.823676 | 1.218115e-53 | -8.615850e-47 |
Msa0577500 | Msa1127650 | 0.832696 | 8.156598e-56 | -8.615850e-47 |
Msa0844240 | Msa1127650 | 0.802576 | 5.254253e-49 | -8.615850e-47 |
Msa0850960 | Msa1127650 | 0.806038 | 9.986403e-50 | -8.615850e-47 |
Msa0856910 | Msa1127650 | 0.810650 | 1.037036e-50 | -8.615850e-47 |
Msa0863930 | Msa1127650 | 0.823248 | 1.534085e-53 | -8.615850e-47 |
Msa0867890 | Msa1127650 | 0.812628 | 3.852644e-51 | -8.615850e-47 |
Msa0880140 | Msa1127650 | 0.811503 | 6.776592e-51 | -8.615850e-47 |
Msa0895790 | Msa1127650 | 0.812640 | 3.830412e-51 | -8.615850e-47 |
Msa0944190 | Msa1127650 | 0.808192 | 3.493904e-50 | -8.615850e-47 |
Msa0945970 | Msa1127650 | 0.835810 | 1.351097e-56 | -8.615850e-47 |
Msa0959050 | Msa1127650 | 0.803961 | 2.714825e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1127650 | MtrunA17_Chr7g0270701 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 3.33e-46 | 152 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 83 sgRNAs with CRISPR-Local
Find 431 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACATGTAAATTGTGCCATTT+TGG | 0.159770 | 7_3:+79261531 | None:intergenic |
AACTCTCACTTCCGAATTTC+CGG | 0.193573 | 7_3:-79266928 | Msa1127650:CDS |
AACAGATCCGGTGATATTTC+AGG | 0.234503 | 7_3:+79266796 | None:intergenic |
TACTCTGACTGTGACGTTTC+TGG | 0.234667 | 7_3:+79266602 | None:intergenic |
CAGTTTCCTTTCTTCCTCTA+TGG | 0.235024 | 7_3:+79262919 | None:intergenic |
TTCTATAGATCCGGTGGTTC+AGG | 0.263634 | 7_3:-79261661 | Msa1127650:three_prime_UTR |
ACCGGATCTGTTAAATATAA+TGG | 0.276498 | 7_3:-79266785 | Msa1127650:CDS |
CGTTTCGGCTAAGCTGAAAA+TGG | 0.288717 | 7_3:+79267127 | None:intergenic |
TCTAAGCTTCTTTCGCGTTT+CGG | 0.291815 | 7_3:+79267112 | None:intergenic |
CGGTTTCGTCTTTACTCTTC+CGG | 0.293909 | 7_3:-79266908 | Msa1127650:intron |
TCTTGATAATCTTATTAATC+AGG | 0.302774 | 7_3:-79266725 | Msa1127650:intron |
AGACAAAGACATGCTAAATA+TGG | 0.324341 | 7_3:-79262963 | Msa1127650:three_prime_UTR |
TAAAGACGAAACCGGAAATT+CGG | 0.355429 | 7_3:+79266917 | None:intergenic |
TATGGTAAATGATTCCAAAA+TGG | 0.357567 | 7_3:-79261545 | Msa1127650:three_prime_UTR |
ACATGATAATTACATACATT+TGG | 0.357990 | 7_3:-79260374 | Msa1127650:three_prime_UTR |
TGCAGGCACTGGTGGGGAGG+AGG | 0.376498 | 7_3:-79262647 | Msa1127650:intron |
TCCTTTCTTCCTCTATGGCC+TGG | 0.384019 | 7_3:+79262924 | None:intergenic |
GTACAAAATTACCTTCTGTT+TGG | 0.386420 | 7_3:+79266514 | None:intergenic |
TACCATCTGCAGGAAATTGA+TGG | 0.386920 | 7_3:-79263016 | Msa1127650:intron |
TGATGAAAGAGATTGCATTT+TGG | 0.392141 | 7_3:-79262855 | Msa1127650:three_prime_UTR |
TCCATTATATTTAACAGATC+CGG | 0.397333 | 7_3:+79266784 | None:intergenic |
AGAATGACTCACATTCCAAC+TGG | 0.414670 | 7_3:-79261604 | Msa1127650:three_prime_UTR |
AAAATTGATTTCTATAGATC+CGG | 0.417665 | 7_3:-79261670 | Msa1127650:three_prime_UTR |
GAGGCTACTGCAGCTATTGT+AGG | 0.422228 | 7_3:-79262217 | Msa1127650:three_prime_UTR |
CTTTCATCAGCATCATCCTT+AGG | 0.423814 | 7_3:+79262869 | None:intergenic |
TCTTCTTCTTAAAGAAGAAA+TGG | 0.429187 | 7_3:-79260568 | Msa1127650:three_prime_UTR |
GCAACTTATTAATCAATTGA+AGG | 0.431077 | 7_3:-79266537 | Msa1127650:three_prime_UTR |
ACACAGTACCTTGAGAGCTT+TGG | 0.439461 | 7_3:+79260897 | None:intergenic |
ATCTGATATGAAGGGATTCA+AGG | 0.449262 | 7_3:-79262452 | Msa1127650:intron |
CATATTGTACAGATCGGTAG+TGG | 0.453978 | 7_3:-79260720 | Msa1127650:intron |
TATAGCTCAATCTGATATGA+AGG | 0.454121 | 7_3:-79262461 | Msa1127650:three_prime_UTR |
CTTGAGGAAAGTTGTATGTT+CGG | 0.461744 | 7_3:+79260679 | None:intergenic |
TTCCGTTGCAATTCTCCCAC+AGG | 0.466385 | 7_3:-79262018 | Msa1127650:three_prime_UTR |
TGATCGACTACTATGAAGTC+TGG | 0.475682 | 7_3:+79260849 | None:intergenic |
AGATGAGCGTTCTCAGCATA+TGG | 0.481437 | 7_3:-79261563 | Msa1127650:three_prime_UTR |
GAAATTCGGAAGTGAGAGTT+CGG | 0.492224 | 7_3:+79266931 | None:intergenic |
GCTGAAGTCATTACTTCCTA+AGG | 0.497967 | 7_3:-79262885 | Msa1127650:three_prime_UTR |
GCCAGGCCATAGAGGAAGAA+AGG | 0.502842 | 7_3:-79262925 | Msa1127650:three_prime_UTR |
AGTATGCTCACAACAAAGGT+TGG | 0.516645 | 7_3:-79262501 | Msa1127650:three_prime_UTR |
GAATAAAGCCAAAGCTCTCA+AGG | 0.523351 | 7_3:-79260905 | Msa1127650:three_prime_UTR |
GATTCTCTGCTATTAAGCAC+AGG | 0.526234 | 7_3:-79266756 | Msa1127650:CDS |
AGAGTATGCAAGAGCTAACA+AGG | 0.527690 | 7_3:-79266585 | Msa1127650:exon |
CAGTTCAGTGTGTGAAAGAG+AGG | 0.530767 | 7_3:-79267032 | Msa1127650:five_prime_UTR |
GGCAACAGAGGAAATGAGCC+AGG | 0.537076 | 7_3:-79262942 | Msa1127650:three_prime_UTR |
GGAAATGAGCCAGGCCATAG+AGG | 0.537832 | 7_3:-79262933 | Msa1127650:three_prime_UTR |
ATGCTGACCACCTGAACCAC+CGG | 0.538846 | 7_3:+79261651 | None:intergenic |
ACTGCAGCTATTGTAGGAGT+TGG | 0.539895 | 7_3:-79262211 | Msa1127650:three_prime_UTR |
CGGAAGAGTAAAGACGAAAC+CGG | 0.540382 | 7_3:+79266909 | None:intergenic |
GAGTGGAATTCATAGAGTAC+AGG | 0.544385 | 7_3:-79262164 | Msa1127650:intron |
GGGAAACTAAAATTTGAGAG+TGG | 0.547551 | 7_3:-79262181 | Msa1127650:three_prime_UTR |
ATCAAAGCTTCGATCAGAGC+AGG | 0.548817 | 7_3:-79260830 | Msa1127650:intron |
TAATTACCTCATCAGCCTGT+GGG | 0.550923 | 7_3:+79262003 | None:intergenic |
AAGAAGAAGAGCATCAATGA+AGG | 0.557042 | 7_3:+79260581 | None:intergenic |
CGTGTAACTGATCATAGAGT+TGG | 0.576242 | 7_3:-79260654 | Msa1127650:three_prime_UTR |
AAATATATGATTTGTACCAT+CGG | 0.582486 | 7_3:-79260290 | Msa1127650:three_prime_UTR |
GTTATTCTGTTCGAGATGCT+AGG | 0.583335 | 7_3:-79260436 | Msa1127650:three_prime_UTR |
AAAGATATTCATTGCAAACA+AGG | 0.584561 | 7_3:+79262621 | None:intergenic |
TCAATTGAAGGCCAAACAGA+AGG | 0.589477 | 7_3:-79266525 | Msa1127650:intron |
AATTGCAACGGAAACAGCAC+TGG | 0.594367 | 7_3:+79262028 | None:intergenic |
TTAATTACCTCATCAGCCTG+TGG | 0.596975 | 7_3:+79262002 | None:intergenic |
AACATAGACGATGTGATGCA+AGG | 0.597991 | 7_3:-79260618 | Msa1127650:three_prime_UTR |
CATGCTAAATATGGCAACAG+AGG | 0.599188 | 7_3:-79262954 | Msa1127650:three_prime_UTR |
TATAGATCCGGTGGTTCAGG+TGG | 0.600047 | 7_3:-79261658 | Msa1127650:three_prime_UTR |
CTGTTCGAGATGCTAGGCAG+AGG | 0.603453 | 7_3:-79260430 | Msa1127650:three_prime_UTR |
ATATTGTACAGATCGGTAGT+GGG | 0.607392 | 7_3:-79260719 | Msa1127650:intron |
AATTCTCCCACAGGCTGATG+AGG | 0.609271 | 7_3:-79262009 | Msa1127650:intron |
ATAGCAATCACGATCCCAGT+TGG | 0.611104 | 7_3:+79261589 | None:intergenic |
ATTGATTTCTATAGATCCGG+TGG | 0.614792 | 7_3:-79261667 | Msa1127650:three_prime_UTR |
ATAGCTCAATCTGATATGAA+GGG | 0.616699 | 7_3:-79262460 | Msa1127650:three_prime_UTR |
AGCCTGTGGGAGAATTGCAA+CGG | 0.624639 | 7_3:+79262016 | None:intergenic |
CAAAGGTTGGAAGTTTGATG+TGG | 0.624693 | 7_3:-79262488 | Msa1127650:three_prime_UTR |
AGTGGAACCTGAAATATCAC+CGG | 0.627145 | 7_3:-79266803 | Msa1127650:CDS |
GTTCTTCTACGTAAGCCAGT+GGG | 0.629474 | 7_3:-79260527 | Msa1127650:three_prime_UTR |
TGATCAGTTACACGGCCTTG+AGG | 0.631260 | 7_3:+79260663 | None:intergenic |
CAACTCTATGATCAGTTACA+CGG | 0.632031 | 7_3:+79260655 | None:intergenic |
GAGAAGTATGCTCACAACAA+AGG | 0.634109 | 7_3:-79262505 | Msa1127650:three_prime_UTR |
TGCTAGGCAGAGGAAGAGCA+TGG | 0.642613 | 7_3:-79260420 | Msa1127650:three_prime_UTR |
CGAACATACAACTTTCCTCA+AGG | 0.648494 | 7_3:-79260678 | Msa1127650:three_prime_UTR |
ATTCTCTGCTATTAAGCACA+GGG | 0.649059 | 7_3:-79266755 | Msa1127650:CDS |
TGAGTTTGGAATGCATCCGA+TGG | 0.659870 | 7_3:+79260274 | None:intergenic |
GAATGACTCACATTCCAACT+GGG | 0.661685 | 7_3:-79261603 | Msa1127650:three_prime_UTR |
TATTGTACAGATCGGTAGTG+GGG | 0.675160 | 7_3:-79260718 | Msa1127650:intron |
AAGGAGCTTCGAAAGCTCAG+TGG | 0.714146 | 7_3:-79266566 | Msa1127650:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTATAATAATGATTCAA+TGG | - | chr7_3:79260750-79260769 | Msa1127650:intron | 10.0% |
!! | TTATTTATGTATAAATATGA+TGG | + | chr7_3:79263638-79263657 | None:intergenic | 10.0% |
!! | AAAAAAATAGTAAAAGAATA+AGG | - | chr7_3:79264356-79264375 | Msa1127650:intron | 10.0% |
!!! | ATAAATAGATTGATTCAAAT+CGG | + | chr7_3:79260557-79260576 | None:intergenic | 15.0% |
!! | TTCTTTATGTATAAATATGA+TGG | + | chr7_3:79261368-79261387 | None:intergenic | 15.0% |
!!! | TATCTTTTTATGTTATTGTT+AGG | + | chr7_3:79261476-79261495 | None:intergenic | 15.0% |
!!! | GATAATAGATTCTAAAAATT+AGG | - | chr7_3:79261492-79261511 | Msa1127650:intron | 15.0% |
!!! | AAAAGGTTTTGATTAATTTT+AGG | - | chr7_3:79262318-79262337 | Msa1127650:intron | 15.0% |
!!! | TATCTTTTTATGTTATTGTT+AGG | + | chr7_3:79261476-79261495 | None:intergenic | 15.0% |
!!! | GATTTATTTACTATGTATTT+TGG | - | chr7_3:79264132-79264151 | Msa1127650:intron | 15.0% |
!!! | AAACTTTAGAAGTTAAATTT+AGG | - | chr7_3:79264196-79264215 | Msa1127650:intron | 15.0% |
!! | TTGTATAAACAAATGAAAAT+GGG | + | chr7_3:79264762-79264781 | None:intergenic | 15.0% |
!! | ATTGTATAAACAAATGAAAA+TGG | + | chr7_3:79264763-79264782 | None:intergenic | 15.0% |
!! | AAGTAATAGACAAAAAAAAA+CGG | + | chr7_3:79265162-79265181 | None:intergenic | 15.0% |
!!! | TCTTTATATTATCACTATTT+TGG | + | chr7_3:79265548-79265567 | None:intergenic | 15.0% |
!! | GTAAAAAAAATGAGGATTAA+TGG | - | chr7_3:79260422-79260441 | Msa1127650:three_prime_UTR | 20.0% |
!!! | AATAATTTTGATAACAGAAG+TGG | - | chr7_3:79260611-79260630 | Msa1127650:three_prime_UTR | 20.0% |
!!! | TCTTGATAATCTTATTAATC+AGG | - | chr7_3:79260707-79260726 | Msa1127650:three_prime_UTR | 20.0% |
!!! | GTTTCTTTATGCATTATTTT+AGG | + | chr7_3:79261394-79261413 | None:intergenic | 20.0% |
!! | AAACTAAATGCCTAAAAAAT+TGG | - | chr7_3:79261424-79261443 | Msa1127650:intron | 20.0% |
!!! | CTATTTGTTACCAATTTTTT+AGG | + | chr7_3:79261437-79261456 | None:intergenic | 20.0% |
!!! | GGTTATTTTTTTTTGTAGTA+TGG | - | chr7_3:79262709-79262728 | Msa1127650:intron | 20.0% |
!! | AAATAGTGTTTAAGCATTTA+TGG | - | chr7_3:79263474-79263493 | Msa1127650:intron | 20.0% |
!!! | GTTTCTTTATGCATTATTTT+AGG | + | chr7_3:79261394-79261413 | None:intergenic | 20.0% |
!! | AAACTAAATGCCTAAAAAAT+TGG | - | chr7_3:79261424-79261443 | Msa1127650:intron | 20.0% |
!!! | CTATTTGTTACCAATTTTTT+AGG | + | chr7_3:79261437-79261456 | None:intergenic | 20.0% |
!! | GATAATAGATCCTAAAATTT+AGG | - | chr7_3:79263762-79263781 | Msa1127650:intron | 20.0% |
!!! | GTTTTAAGTTCCTAAATTTT+AGG | + | chr7_3:79263775-79263794 | None:intergenic | 20.0% |
!! | AAATTTATCCTTCATATAAG+CGG | - | chr7_3:79263849-79263868 | Msa1127650:intron | 20.0% |
!! | TTTGTTAAACATATATGCTT+AGG | + | chr7_3:79263927-79263946 | None:intergenic | 20.0% |
!! | ACATAGTAAATAAATCACAT+AGG | + | chr7_3:79264128-79264147 | None:intergenic | 20.0% |
!!! | ATTTGTTTATACAATTTTGC+AGG | - | chr7_3:79264768-79264787 | Msa1127650:intron | 20.0% |
!!! | ATGAATATCTTTAAGATGTA+AGG | - | chr7_3:79264822-79264841 | Msa1127650:intron | 20.0% |
!!! | TCTATTACTTGATGTATTTT+TGG | - | chr7_3:79265172-79265191 | Msa1127650:intron | 20.0% |
!! | GTAATTAATAAATACCCTTA+TGG | - | chr7_3:79265445-79265464 | Msa1127650:intron | 20.0% |
!! | TGAATCTTATATTATGTTCA+TGG | - | chr7_3:79265698-79265717 | Msa1127650:intron | 20.0% |
!!! | AAAATTGATTTCTATAGATC+CGG | - | chr7_3:79265762-79265781 | Msa1127650:intron | 20.0% |
!! | AATAAGAGAAATATAGAACA+GGG | + | chr7_3:79266456-79266475 | None:intergenic | 20.0% |
!! | AAATAAGAGAAATATAGAAC+AGG | + | chr7_3:79266457-79266476 | None:intergenic | 20.0% |
!! | ACATGATAATTACATACATT+TGG | - | chr7_3:79267058-79267077 | Msa1127650:five_prime_UTR | 20.0% |
!!! | AAATATATGATTTGTACCAT+CGG | - | chr7_3:79267142-79267161 | Msa1127650:five_prime_UTR | 20.0% |
! | AAAGAGAGGTAAAAAAAATG+AGG | - | chr7_3:79260414-79260433 | Msa1127650:three_prime_UTR | 25.0% |
! | TCCATTATATTTAACAGATC+CGG | + | chr7_3:79260651-79260670 | None:intergenic | 25.0% |
! | GCAACTTATTAATCAATTGA+AGG | - | chr7_3:79260895-79260914 | Msa1127650:three_prime_UTR | 25.0% |
!! | TTGACTGTAATTACATGTTT+TGG | - | chr7_3:79261013-79261032 | Msa1127650:intron | 25.0% |
! | ATGATATTAAGCTAATGCTT+TGG | - | chr7_3:79261173-79261192 | Msa1127650:intron | 25.0% |
!!! | TGACTATCTTATTTTGGTAA+AGG | - | chr7_3:79261202-79261221 | Msa1127650:intron | 25.0% |
!!! | GACTATCTTATTTTGGTAAA+GGG | - | chr7_3:79261203-79261222 | Msa1127650:intron | 25.0% |
!! | TTAAGATTGTAAGTATTGTG+TGG | - | chr7_3:79261259-79261278 | Msa1127650:intron | 25.0% |
! | AAAACTGCTAATAACGTTAT+TGG | - | chr7_3:79261921-79261940 | Msa1127650:intron | 25.0% |
! | ATATGGGAACAAATGAATAA+AGG | + | chr7_3:79261952-79261971 | None:intergenic | 25.0% |
! | TTTATTCATTTGTTCCCATA+TGG | - | chr7_3:79261951-79261970 | Msa1127650:intron | 25.0% |
!! | AAATTAGTTTCAAACCTGAA+AGG | - | chr7_3:79262358-79262377 | Msa1127650:intron | 25.0% |
!!! | TTTTTTTTTGTAGTATGGAC+AGG | - | chr7_3:79262714-79262733 | Msa1127650:intron | 25.0% |
!!! | TTTTTTTTGTAGTATGGACA+GGG | - | chr7_3:79262715-79262734 | Msa1127650:intron | 25.0% |
! | AAATTAAAGAACTACAATGG+TGG | + | chr7_3:79262787-79262806 | None:intergenic | 25.0% |
! | GCTAAATTAAAGAACTACAA+TGG | + | chr7_3:79262790-79262809 | None:intergenic | 25.0% |
! | AAGAACAAAGAAGAATGATA+AGG | + | chr7_3:79262843-79262862 | None:intergenic | 25.0% |
! | TTATCATTCTTCTTTGTTCT+TGG | - | chr7_3:79262842-79262861 | Msa1127650:intron | 25.0% |
! | TATCATTCTTCTTTGTTCTT+GGG | - | chr7_3:79262843-79262862 | Msa1127650:three_prime_UTR | 25.0% |
! | TGAAGAAGATGAAAGAATTA+GGG | + | chr7_3:79263127-79263146 | None:intergenic | 25.0% |
! | ATGAAGAAGATGAAAGAATT+AGG | + | chr7_3:79263128-79263147 | None:intergenic | 25.0% |
!! | TCAAATCAGCATTTGAAATA+TGG | + | chr7_3:79263170-79263189 | None:intergenic | 25.0% |
!!! | TATTTCAAATGCTGATTTGA+TGG | - | chr7_3:79263170-79263189 | Msa1127650:intron | 25.0% |
! | AGATAAAAAATCACAAGGAA+AGG | + | chr7_3:79263269-79263288 | None:intergenic | 25.0% |
! | TGGTGAAAACTATCATATAT+GGG | + | chr7_3:79263391-79263410 | None:intergenic | 25.0% |
! | ATGGTGAAAACTATCATATA+TGG | + | chr7_3:79263392-79263411 | None:intergenic | 25.0% |
!! | TTTTCAATTCATCAAACAGA+TGG | + | chr7_3:79263457-79263476 | None:intergenic | 25.0% |
! | AATTTATCCTTCATATAAGC+GGG | - | chr7_3:79263850-79263869 | Msa1127650:intron | 25.0% |
!!! | AGTTCTAGAAATAAGATTGA+AGG | - | chr7_3:79264155-79264174 | Msa1127650:intron | 25.0% |
!! | ATTGAAGGTGTACATAATAT+TGG | - | chr7_3:79264170-79264189 | Msa1127650:intron | 25.0% |
! | GAAGTTAAATTTAGGCAATT+AGG | - | chr7_3:79264204-79264223 | Msa1127650:intron | 25.0% |
! | TAAATTATCACTGTTGAAGA+TGG | - | chr7_3:79264613-79264632 | Msa1127650:intron | 25.0% |
!! | TGGGAATAAAAAAAAGTGTA+GGG | + | chr7_3:79264743-79264762 | None:intergenic | 25.0% |
!! | ATGGGAATAAAAAAAAGTGT+AGG | + | chr7_3:79264744-79264763 | None:intergenic | 25.0% |
! | AAAGATATTCATTGCAAACA+AGG | + | chr7_3:79264814-79264833 | None:intergenic | 25.0% |
! | TAAGGTTACACTTTATACTT+GGG | - | chr7_3:79264840-79264859 | Msa1127650:intron | 25.0% |
! | ACAATGGTAAACACTATAAA+CGG | + | chr7_3:79265111-79265130 | None:intergenic | 25.0% |
!!! | TACTTGATGTATTTTTGGTT+TGG | - | chr7_3:79265177-79265196 | Msa1127650:intron | 25.0% |
! | CATTCAAATTTCATATCACA+AGG | + | chr7_3:79265478-79265497 | None:intergenic | 25.0% |
! | GATTGTAAAAGATATTGAAC+AGG | + | chr7_3:79265658-79265677 | None:intergenic | 25.0% |
! | TATGGTAAATGATTCCAAAA+TGG | - | chr7_3:79265887-79265906 | Msa1127650:intron | 25.0% |
!! | ACTAACTCCATAAACATTTT+CGG | - | chr7_3:79265995-79266014 | Msa1127650:intron | 25.0% |
! | TAATGACATGAACTTACTAA+TGG | - | chr7_3:79266163-79266182 | Msa1127650:intron | 25.0% |
! | CTTAATGGAAAATAACCTAA+CGG | + | chr7_3:79266331-79266350 | None:intergenic | 25.0% |
! | AAGTTTCATATTGTACAGAT+CGG | - | chr7_3:79266706-79266725 | Msa1127650:intron | 25.0% |
! | TCTTCTTCTTAAAGAAGAAA+TGG | - | chr7_3:79266864-79266883 | Msa1127650:intron | 25.0% |
ACCGGATCTGTTAAATATAA+TGG | - | chr7_3:79260647-79260666 | Msa1127650:three_prime_UTR | 30.0% | |
GTACAAAATTACCTTCTGTT+TGG | + | chr7_3:79260921-79260940 | None:intergenic | 30.0% | |
!! | CTACACTGACTATCTTATTT+TGG | - | chr7_3:79261196-79261215 | Msa1127650:intron | 30.0% |
TTGTGAGAAGTTTGAATTTC+AGG | + | chr7_3:79261719-79261738 | None:intergenic | 30.0% | |
AATTTCTTGAGTCAGATAGT+TGG | + | chr7_3:79261753-79261772 | None:intergenic | 30.0% | |
!! | ACAATTACTTTGTTGCTTTG+TGG | - | chr7_3:79261787-79261806 | Msa1127650:intron | 30.0% |
CTATAGCCTACAAAAATTTC+AGG | - | chr7_3:79261835-79261854 | Msa1127650:intron | 30.0% | |
!! | CTTTCTTCTTGATTTGTTCA+AGG | - | chr7_3:79261863-79261882 | Msa1127650:intron | 30.0% |
ATGGTCAATGTTCAAATGAA+AGG | + | chr7_3:79262213-79262232 | None:intergenic | 30.0% | |
AGATGCAAACAACATAGAAA+TGG | + | chr7_3:79262232-79262251 | None:intergenic | 30.0% | |
TCCAAAGTCAGAATTGAAAA+TGG | + | chr7_3:79262429-79262448 | None:intergenic | 30.0% | |
! | ATTTGAGATGCAAAAGATGA+AGG | + | chr7_3:79263076-79263095 | None:intergenic | 30.0% |
AAGAAGATGAAAGAATTAGG+GGG | + | chr7_3:79263125-79263144 | None:intergenic | 30.0% | |
GAAGAAGATGAAAGAATTAG+GGG | + | chr7_3:79263126-79263145 | None:intergenic | 30.0% | |
! | CTTCTTCATATTCAGTTTTG+AGG | - | chr7_3:79263139-79263158 | Msa1127650:intron | 30.0% |
! | TGATTTGATGGTCATAATTC+TGG | - | chr7_3:79263182-79263201 | Msa1127650:intron | 30.0% |
AACAAGAAAGTCAAAAGCAA+GGG | + | chr7_3:79263244-79263263 | None:intergenic | 30.0% | |
AAACAAGAAAGTCAAAAGCA+AGG | + | chr7_3:79263245-79263264 | None:intergenic | 30.0% | |
!!! | TTTTTTATCTGAGCCATTGT+TGG | - | chr7_3:79263279-79263298 | Msa1127650:intron | 30.0% |
TAGTGTTTAAGCATTTATGG+TGG | - | chr7_3:79263477-79263496 | Msa1127650:intron | 30.0% | |
AGTGTTTAAGCATTTATGGT+GGG | - | chr7_3:79263478-79263497 | Msa1127650:intron | 30.0% | |
CCTTTCTATATCCAACAAAT+TGG | + | chr7_3:79263552-79263571 | None:intergenic | 30.0% | |
!! | CCAATTTGTTGGATATAGAA+AGG | - | chr7_3:79263549-79263568 | Msa1127650:intron | 30.0% |
ATTTATCCTTCATATAAGCG+GGG | - | chr7_3:79263851-79263870 | Msa1127650:intron | 30.0% | |
AAAGACAGAAAAAAATGCCA+TGG | + | chr7_3:79264079-79264098 | None:intergenic | 30.0% | |
!!! | TGGCATTTTTTTCTGTCTTT+TGG | - | chr7_3:79264079-79264098 | Msa1127650:intron | 30.0% |
!!! | CATTTTTTTCTGTCTTTTGG+TGG | - | chr7_3:79264082-79264101 | Msa1127650:intron | 30.0% |
TAGTAAAAGAATAAGGCTGT+CGG | - | chr7_3:79264363-79264382 | Msa1127650:intron | 30.0% | |
AGACAAAGACATGCTAAATA+TGG | - | chr7_3:79264469-79264488 | Msa1127650:intron | 30.0% | |
! | TGATGAAAGAGATTGCATTT+TGG | - | chr7_3:79264577-79264596 | Msa1127650:intron | 30.0% |
AAAAAAGCAAAACGATCAAC+AGG | + | chr7_3:79264702-79264721 | None:intergenic | 30.0% | |
GTAAGGTTACACTTTATACT+TGG | - | chr7_3:79264839-79264858 | Msa1127650:intron | 30.0% | |
TATAGCTCAATCTGATATGA+AGG | - | chr7_3:79264971-79264990 | Msa1127650:intron | 30.0% | |
ATAGCTCAATCTGATATGAA+GGG | - | chr7_3:79264972-79264991 | Msa1127650:intron | 30.0% | |
GATAGAAGTTGCATTTGTAT+GGG | + | chr7_3:79265582-79265601 | None:intergenic | 30.0% | |
AGATAGAAGTTGCATTTGTA+TGG | + | chr7_3:79265583-79265602 | None:intergenic | 30.0% | |
!!! | ACATGTAAATTGTGCCATTT+TGG | + | chr7_3:79265904-79265923 | None:intergenic | 30.0% |
AATGTTTATGGAGTTAGTTG+TGG | + | chr7_3:79265993-79266012 | None:intergenic | 30.0% | |
TGACACATGGTTATTACTAA+TGG | - | chr7_3:79266105-79266124 | Msa1127650:intron | 30.0% | |
GACACATGGTTATTACTAAT+GGG | - | chr7_3:79266106-79266125 | Msa1127650:intron | 30.0% | |
CTGAAACAACATATGCTTAA+TGG | + | chr7_3:79266346-79266365 | None:intergenic | 30.0% | |
CAAAATAATAAAGTCATCGC+AGG | + | chr7_3:79266429-79266448 | None:intergenic | 30.0% | |
! | CTGCGATGACTTTATTATTT+TGG | - | chr7_3:79266427-79266446 | Msa1127650:intron | 30.0% |
AAGAAAAGAAGGGGAAAAAA+AGG | + | chr7_3:79266674-79266693 | None:intergenic | 30.0% | |
! | TTTTTCCCCTTCTTTTCTTT+TGG | - | chr7_3:79266675-79266694 | Msa1127650:intron | 30.0% |
TCAATCCAAAAGAAAAGAAG+GGG | + | chr7_3:79266683-79266702 | None:intergenic | 30.0% | |
GTCAATCCAAAAGAAAAGAA+GGG | + | chr7_3:79266684-79266703 | None:intergenic | 30.0% | |
AGTCAATCCAAAAGAAAAGA+AGG | + | chr7_3:79266685-79266704 | None:intergenic | 30.0% | |
TCAACAAAAATCTTCGACTG+AGG | + | chr7_3:79260367-79260386 | None:intergenic | 35.0% | |
TAAAGACGAAACCGGAAATT+CGG | + | chr7_3:79260518-79260537 | None:intergenic | 35.0% | |
GATTCAAATCGGAAAGTTAC+CGG | + | chr7_3:79260546-79260565 | None:intergenic | 35.0% | |
ATTCTCTGCTATTAAGCACA+GGG | - | chr7_3:79260677-79260696 | Msa1127650:three_prime_UTR | 35.0% | |
AAAATGTCGTGTAAGTGTCT+TGG | - | chr7_3:79261104-79261123 | Msa1127650:intron | 35.0% | |
AAATGTCGTGTAAGTGTCTT+GGG | - | chr7_3:79261105-79261124 | Msa1127650:intron | 35.0% | |
CTAAGCTATGTCTTTGTCTT+CGG | - | chr7_3:79261147-79261166 | Msa1127650:intron | 35.0% | |
!! | TAAGTATTGTGTGGCTTTGT+TGG | - | chr7_3:79261268-79261287 | Msa1127650:intron | 35.0% |
!! | TGGCTTTGTTGGATATAGAA+AGG | - | chr7_3:79261279-79261298 | Msa1127650:intron | 35.0% |
GGATATAGAAAGGTTTAACG+TGG | - | chr7_3:79261289-79261308 | Msa1127650:intron | 35.0% | |
TGTTATGTGAACAGCATGAA+AGG | - | chr7_3:79261321-79261340 | Msa1127650:intron | 35.0% | |
TAACAAATAGAGCATACCAG+AGG | - | chr7_3:79261447-79261466 | Msa1127650:intron | 35.0% | |
AACAAATAGAGCATACCAGA+GGG | - | chr7_3:79261448-79261467 | Msa1127650:intron | 35.0% | |
GATATGCAGTTTCAGATTCA+AGG | + | chr7_3:79261560-79261579 | None:intergenic | 35.0% | |
CACTTTCAGACATCTATCAA+AGG | + | chr7_3:79261651-79261670 | None:intergenic | 35.0% | |
TGAGAAGTTTGAATTTCAGG+AGG | + | chr7_3:79261716-79261735 | None:intergenic | 35.0% | |
TGAGTCAGATAGTTGGAATT+GGG | + | chr7_3:79261746-79261765 | None:intergenic | 35.0% | |
TTGAGTCAGATAGTTGGAAT+TGG | + | chr7_3:79261747-79261766 | None:intergenic | 35.0% | |
! | GCAGAACCTGAAATTTTTGT+AGG | + | chr7_3:79261844-79261863 | None:intergenic | 35.0% |
! | ACTTCAGTAACATCCTGTTT+TGG | - | chr7_3:79261991-79262010 | Msa1127650:intron | 35.0% |
! | GTTTCCATTGATTGTATCGA+TGG | - | chr7_3:79262059-79262078 | Msa1127650:three_prime_UTR | 35.0% |
AGTTCCATCGATACAATCAA+TGG | + | chr7_3:79262066-79262085 | None:intergenic | 35.0% | |
TTCCTCATTCATCAAATCCA+AGG | - | chr7_3:79262176-79262195 | Msa1127650:three_prime_UTR | 35.0% | |
!! | TGGTTATAAGGTGTTGTTTG+AGG | + | chr7_3:79262274-79262293 | None:intergenic | 35.0% |
ACTGCTAGAGAATGGTTATA+AGG | + | chr7_3:79262286-79262305 | None:intergenic | 35.0% | |
CTTATCGAAGTAAAAGGCAA+GGG | + | chr7_3:79262402-79262421 | None:intergenic | 35.0% | |
ACTTATCGAAGTAAAAGGCA+AGG | + | chr7_3:79262403-79262422 | None:intergenic | 35.0% | |
!! | GCCATTTTCAATTCTGACTT+TGG | - | chr7_3:79262425-79262444 | Msa1127650:intron | 35.0% |
TCGTGAGCTCTTTAATAATC+TGG | + | chr7_3:79262466-79262485 | None:intergenic | 35.0% | |
TATCTATAAGCCAACTCTCT+CGG | - | chr7_3:79262514-79262533 | Msa1127650:intron | 35.0% | |
ACATGTGGAAAGAATATGCA+AGG | + | chr7_3:79262628-79262647 | None:intergenic | 35.0% | |
! | TAAAGAACTACAATGGTGGA+AGG | + | chr7_3:79262783-79262802 | None:intergenic | 35.0% |
AGAAGAATGATAAGGTCTGA+AGG | + | chr7_3:79262835-79262854 | None:intergenic | 35.0% | |
TAGTTGCTTCGAATCTTTCA+AGG | - | chr7_3:79262935-79262954 | Msa1127650:three_prime_UTR | 35.0% | |
GCTAACAAAGTAAGATTGCT+TGG | + | chr7_3:79263009-79263028 | None:intergenic | 35.0% | |
GGCTCAGATAAAAAATCACA+AGG | + | chr7_3:79263274-79263293 | None:intergenic | 35.0% | |
TTTGTCAGACAATCCAACAA+TGG | + | chr7_3:79263295-79263314 | None:intergenic | 35.0% | |
ATTGTTGGATTGTCTGACAA+AGG | - | chr7_3:79263294-79263313 | Msa1127650:intron | 35.0% | |
! | TAGTTTTCACCATCAAACAC+AGG | - | chr7_3:79263399-79263418 | Msa1127650:intron | 35.0% |
! | ATCAAACACAGGTAATGGTA+GGG | - | chr7_3:79263410-79263429 | Msa1127650:intron | 35.0% |
GGATATAGAAAGGTTTAACG+TGG | - | chr7_3:79261289-79261308 | Msa1127650:intron | 35.0% | |
TGTTATGTGAACAGCATGAA+AGG | - | chr7_3:79261321-79261340 | Msa1127650:intron | 35.0% | |
TTTATCCTTCATATAAGCGG+GGG | - | chr7_3:79263852-79263871 | Msa1127650:intron | 35.0% | |
CCATGTCATGAACTAAATCT+TGG | + | chr7_3:79263990-79264009 | None:intergenic | 35.0% | |
! | CCAAGATTTAGTTCATGACA+TGG | - | chr7_3:79263987-79264006 | Msa1127650:intron | 35.0% |
AATTTAGGCAATTAGGCTGT+CGG | - | chr7_3:79264211-79264230 | Msa1127650:intron | 35.0% | |
CTTACAATGCCGAAATTGTT+AGG | - | chr7_3:79264249-79264268 | Msa1127650:intron | 35.0% | |
!!! | TTTTTTGTCTGTAGACGAAG+TGG | + | chr7_3:79264341-79264360 | None:intergenic | 35.0% |
AGTAAAAGAATAAGGCTGTC+GGG | - | chr7_3:79264364-79264383 | Msa1127650:intron | 35.0% | |
TCTTGAATATCACGTGATAC+AGG | - | chr7_3:79264389-79264408 | Msa1127650:intron | 35.0% | |
! | TGAAAGAGATTGCATTTTGG+AGG | - | chr7_3:79264580-79264599 | Msa1127650:intron | 35.0% |
AATTTCTGTCAGCTTGTCTT+AGG | - | chr7_3:79264675-79264694 | Msa1127650:intron | 35.0% | |
! | TTATACAATTTTGCAGGCAC+TGG | - | chr7_3:79264774-79264793 | Msa1127650:intron | 35.0% |
GATACTATCTTGCCAAATGT+AGG | - | chr7_3:79264901-79264920 | Msa1127650:intron | 35.0% | |
ATACTTCTCGTACCTACATT+TGG | + | chr7_3:79264916-79264935 | None:intergenic | 35.0% | |
ATCTGATATGAAGGGATTCA+AGG | - | chr7_3:79264980-79264999 | Msa1127650:intron | 35.0% | |
!! | ATGACCTGTTTTTCAGTATG+TGG | - | chr7_3:79265026-79265045 | Msa1127650:intron | 35.0% |
TGGTAAACACTATAAACGGA+AGG | + | chr7_3:79265107-79265126 | None:intergenic | 35.0% | |
CAAACGGAAGGAAAAAACAA+TGG | + | chr7_3:79265127-79265146 | None:intergenic | 35.0% | |
!!! | ATTGTAGGAGTTGGTGTTTT+TGG | - | chr7_3:79265230-79265249 | Msa1127650:intron | 35.0% |
!!! | TTGTAGGAGTTGGTGTTTTT+GGG | - | chr7_3:79265231-79265250 | Msa1127650:intron | 35.0% |
GGGAAACTAAAATTTGAGAG+TGG | - | chr7_3:79265251-79265270 | Msa1127650:intron | 35.0% | |
ATTCGTAGATTTGATGTGAG+AGG | + | chr7_3:79265306-79265325 | None:intergenic | 35.0% | |
! | ATGAACACGTCCCAATTTTT+CGG | + | chr7_3:79265383-79265402 | None:intergenic | 35.0% |
ATGCAACTTCTATCTTTCTG+TGG | - | chr7_3:79265588-79265607 | Msa1127650:intron | 35.0% | |
TATCTTTCTGTGGTTTCCTT+TGG | - | chr7_3:79265598-79265617 | Msa1127650:intron | 35.0% | |
TGATGAATGGAATTGCAAAG+AGG | - | chr7_3:79265632-79265651 | Msa1127650:intron | 35.0% | |
GGTTGACGTTCAGTTAAAAA+AGG | - | chr7_3:79265731-79265750 | Msa1127650:intron | 35.0% | |
! | ATTGATTTCTATAGATCCGG+TGG | - | chr7_3:79265765-79265784 | Msa1127650:intron | 35.0% |
TTGTAGCACTACTAATAACG+TGG | + | chr7_3:79266026-79266045 | None:intergenic | 35.0% | |
GACATGAACTTACTAATGGA+AGG | - | chr7_3:79266167-79266186 | Msa1127650:intron | 35.0% | |
GATTTGTGTTCATTCATGTG+TGG | - | chr7_3:79266232-79266251 | Msa1127650:intron | 35.0% | |
!!! | CACAGAATTTTGAGGCTAAA+TGG | + | chr7_3:79266266-79266285 | None:intergenic | 35.0% |
AAAATTCTGTGTACACGGAT+AGG | - | chr7_3:79266275-79266294 | Msa1127650:intron | 35.0% | |
AAATGCCTCTTGCAATATCT+TGG | + | chr7_3:79266373-79266392 | None:intergenic | 35.0% | |
AGGCATTTGACATAGTTGAT+GGG | - | chr7_3:79266385-79266404 | Msa1127650:intron | 35.0% | |
AGCAGAAATTTGAAAGCAGA+GGG | + | chr7_3:79266505-79266524 | None:intergenic | 35.0% | |
ATATTGTACAGATCGGTAGT+GGG | - | chr7_3:79266713-79266732 | Msa1127650:intron | 35.0% | |
CTTGAGGAAAGTTGTATGTT+CGG | + | chr7_3:79266756-79266775 | None:intergenic | 35.0% | |
CAACTCTATGATCAGTTACA+CGG | + | chr7_3:79266780-79266799 | None:intergenic | 35.0% | |
!! | AAGAAGAAGAGCATCAATGA+AGG | + | chr7_3:79266854-79266873 | None:intergenic | 35.0% |
TAAGCAAAAATTTGACCCAC+TGG | + | chr7_3:79266923-79266942 | None:intergenic | 35.0% | |
TCTAAGCTTCTTTCGCGTTT+CGG | + | chr7_3:79260323-79260342 | None:intergenic | 40.0% | |
!!! | TCCGTTATCTTTTTCAGCTG+CGG | - | chr7_3:79260459-79260478 | Msa1127650:three_prime_UTR | 40.0% |
TCCGCAGCTGAAAAAGATAA+CGG | + | chr7_3:79260463-79260482 | None:intergenic | 40.0% | |
GAAATTCGGAAGTGAGAGTT+CGG | + | chr7_3:79260504-79260523 | None:intergenic | 40.0% | |
AACTCTCACTTCCGAATTTC+CGG | - | chr7_3:79260504-79260523 | Msa1127650:three_prime_UTR | 40.0% | |
AGTGGAACCTGAAATATCAC+CGG | - | chr7_3:79260629-79260648 | Msa1127650:three_prime_UTR | 40.0% | |
AACAGATCCGGTGATATTTC+AGG | + | chr7_3:79260639-79260658 | None:intergenic | 40.0% | |
GATTCTCTGCTATTAAGCAC+AGG | - | chr7_3:79260676-79260695 | Msa1127650:three_prime_UTR | 40.0% | |
AGAGTATGCAAGAGCTAACA+AGG | - | chr7_3:79260847-79260866 | Msa1127650:three_prime_UTR | 40.0% | |
TCAATTGAAGGCCAAACAGA+AGG | - | chr7_3:79260907-79260926 | Msa1127650:three_prime_UTR | 40.0% | |
GCATAGACACTTCTAATCGA+AGG | + | chr7_3:79261080-79261099 | None:intergenic | 40.0% | |
TGTTATTGTTAGGAACCCTC+TGG | + | chr7_3:79261466-79261485 | None:intergenic | 40.0% | |
ATGCAGTTTCAGATTCAAGG+AGG | + | chr7_3:79261557-79261576 | None:intergenic | 40.0% | |
!! | CTAGCTTTGTCATATCCTTC+TGG | - | chr7_3:79261604-79261623 | Msa1127650:three_prime_UTR | 40.0% |
! | AGTGATCTAGTTCCTCTAAC+AGG | - | chr7_3:79261667-79261686 | Msa1127650:three_prime_UTR | 40.0% |
!! | GTTGATGATGAACCTGTTAG+AGG | + | chr7_3:79261682-79261701 | None:intergenic | 40.0% |
GCATCCACAGCAGAATATTT+AGG | - | chr7_3:79261889-79261908 | Msa1127650:intron | 40.0% | |
CAAGCCTAAATATTCTGCTG+TGG | + | chr7_3:79261896-79261915 | None:intergenic | 40.0% | |
!! | AGCACAAGTTGATGCCATAT+GGG | + | chr7_3:79261968-79261987 | None:intergenic | 40.0% |
!! | AAGCACAAGTTGATGCCATA+TGG | + | chr7_3:79261969-79261988 | None:intergenic | 40.0% |
!!! | TAACATCCTGTTTTGGTTCC+AGG | - | chr7_3:79261998-79262017 | Msa1127650:intron | 40.0% |
! | TGTCAAAGAACTTGTTCCAG+GGG | + | chr7_3:79262028-79262047 | None:intergenic | 40.0% |
! | CTGTCAAAGAACTTGTTCCA+GGG | + | chr7_3:79262029-79262048 | None:intergenic | 40.0% |
! | TCTGTCAAAGAACTTGTTCC+AGG | + | chr7_3:79262030-79262049 | None:intergenic | 40.0% |
ACAACATGCTGTTGTACACA+AGG | + | chr7_3:79262157-79262176 | None:intergenic | 40.0% | |
TGCCTTGGATTTGATGAATG+AGG | + | chr7_3:79262181-79262200 | None:intergenic | 40.0% | |
GTTACTCAACTGCTAGAGAA+TGG | + | chr7_3:79262294-79262313 | None:intergenic | 40.0% | |
GCAGTTGAGTAACACTCAAA+AGG | - | chr7_3:79262301-79262320 | Msa1127650:intron | 40.0% | |
GTTGCAATTGAAAGCCTTTC+AGG | + | chr7_3:79262375-79262394 | None:intergenic | 40.0% | |
! | GAGAGTTGGCTTATAGATAG+TGG | + | chr7_3:79262513-79262532 | None:intergenic | 40.0% |
ATCTATAAGCCAACTCTCTC+GGG | - | chr7_3:79262515-79262534 | Msa1127650:intron | 40.0% | |
TGCTGAAGATCAAACTTTGG+AGG | + | chr7_3:79262580-79262599 | None:intergenic | 40.0% | |
ATATGCAAGGCTCAACATCA+GGG | + | chr7_3:79262615-79262634 | None:intergenic | 40.0% | |
AATATGCAAGGCTCAACATC+AGG | + | chr7_3:79262616-79262635 | None:intergenic | 40.0% | |
! | TGTCACAAGTGTTGTCAGTT+AGG | + | chr7_3:79262651-79262670 | None:intergenic | 40.0% |
! | CACTTGTGACATTTTACGTC+TGG | - | chr7_3:79262660-79262679 | Msa1127650:intron | 40.0% |
AGAGCTTGTAAATGCTATGC+AGG | + | chr7_3:79262869-79262888 | None:intergenic | 40.0% | |
AGCATTTACAAGCTCTGTCA+CGG | - | chr7_3:79262873-79262892 | Msa1127650:three_prime_UTR | 40.0% | |
! | GGTAAGCTTTAACATGTCCT+TGG | - | chr7_3:79262894-79262913 | Msa1127650:three_prime_UTR | 40.0% |
! | CATGTCCTTGGTATTTTCCA+AGG | - | chr7_3:79262906-79262925 | Msa1127650:three_prime_UTR | 40.0% |
CACTTCCTTGGAAAATACCA+AGG | + | chr7_3:79262914-79262933 | None:intergenic | 40.0% | |
TTTAGAGGCAAATGACCTCT+GGG | + | chr7_3:79263349-79263368 | None:intergenic | 40.0% | |
ATTTAGAGGCAAATGACCTC+TGG | + | chr7_3:79263350-79263369 | None:intergenic | 40.0% | |
ACTATCATATATGGGCAGCA+AGG | + | chr7_3:79263383-79263402 | None:intergenic | 40.0% | |
TCACCATCAAACACAGGTAA+TGG | - | chr7_3:79263405-79263424 | Msa1127650:intron | 40.0% | |
CTACCATTACCTGTGTTTGA+TGG | + | chr7_3:79263411-79263430 | None:intergenic | 40.0% | |
! | CATCAAACACAGGTAATGGT+AGG | - | chr7_3:79263409-79263428 | Msa1127650:intron | 40.0% |
!! | GGCTCTAGATACCAATTTGT+TGG | - | chr7_3:79263538-79263557 | Msa1127650:intron | 40.0% |
TTCATAGTCATCCAGTCAAC+AGG | - | chr7_3:79261531-79261550 | Msa1127650:intron | 40.0% | |
CTAAACTTAAGCCTGTTGAC+TGG | + | chr7_3:79263815-79263834 | None:intergenic | 40.0% | |
TTATCCTTCATATAAGCGGG+GGG | - | chr7_3:79263853-79263872 | Msa1127650:intron | 40.0% | |
CAACTCCACTTTGTTGAAAC+AGG | - | chr7_3:79264038-79264057 | Msa1127650:intron | 40.0% | |
AACAGCCTGTTTCAACAAAG+TGG | + | chr7_3:79264046-79264065 | None:intergenic | 40.0% | |
!! | GGCTGTTGTTATTTCTTCCA+TGG | - | chr7_3:79264059-79264078 | Msa1127650:intron | 40.0% |
CAATGCCGAAATTGTTAGGT+TGG | - | chr7_3:79264253-79264272 | Msa1127650:intron | 40.0% | |
! | TACAGGTTTTTACCATCTGC+AGG | - | chr7_3:79264406-79264425 | Msa1127650:intron | 40.0% |
TACCATCTGCAGGAAATTGA+TGG | - | chr7_3:79264416-79264435 | Msa1127650:intron | 40.0% | |
CATGCTAAATATGGCAACAG+AGG | - | chr7_3:79264478-79264497 | Msa1127650:intron | 40.0% | |
CAGTTTCCTTTCTTCCTCTA+TGG | + | chr7_3:79264516-79264535 | None:intergenic | 40.0% | |
GCTGAAGTCATTACTTCCTA+AGG | - | chr7_3:79264547-79264566 | Msa1127650:intron | 40.0% | |
CTTTCATCAGCATCATCCTT+AGG | + | chr7_3:79264566-79264585 | None:intergenic | 40.0% | |
! | GAGAAGTATGCTCACAACAA+AGG | - | chr7_3:79264927-79264946 | Msa1127650:intron | 40.0% |
AGTATGCTCACAACAAAGGT+TGG | - | chr7_3:79264931-79264950 | Msa1127650:intron | 40.0% | |
CAAAGGTTGGAAGTTTGATG+TGG | - | chr7_3:79264944-79264963 | Msa1127650:intron | 40.0% | |
ACAGCCACATACTGAAAAAC+AGG | + | chr7_3:79265033-79265052 | None:intergenic | 40.0% | |
GAGTGGAATTCATAGAGTAC+AGG | - | chr7_3:79265268-79265287 | Msa1127650:intron | 40.0% | |
TAATTACCTCATCAGCCTGT+GGG | + | chr7_3:79265432-79265451 | None:intergenic | 40.0% | |
TTAATTACCTCATCAGCCTG+TGG | + | chr7_3:79265433-79265452 | None:intergenic | 40.0% | |
!! | CACAAGGCATTGTTCCATAA+GGG | + | chr7_3:79265462-79265481 | None:intergenic | 40.0% |
!! | TCACAAGGCATTGTTCCATA+AGG | + | chr7_3:79265463-79265482 | None:intergenic | 40.0% |
TATGTTCATGGCCCATTTGT+AGG | - | chr7_3:79265710-79265729 | Msa1127650:intron | 40.0% | |
CTGAACGTCAACCTACAAAT+GGG | + | chr7_3:79265724-79265743 | None:intergenic | 40.0% | |
ACTGAACGTCAACCTACAAA+TGG | + | chr7_3:79265725-79265744 | None:intergenic | 40.0% | |
AGAATGACTCACATTCCAAC+TGG | - | chr7_3:79265828-79265847 | Msa1127650:intron | 40.0% | |
GAATGACTCACATTCCAACT+GGG | - | chr7_3:79265829-79265848 | Msa1127650:intron | 40.0% | |
GGAGATGCCGAAAATGTTTA+TGG | + | chr7_3:79266005-79266024 | None:intergenic | 40.0% | |
CACACACTTAAAGTGACACA+TGG | - | chr7_3:79266092-79266111 | Msa1127650:intron | 40.0% | |
TGAACTTACTAATGGAAGGC+AGG | - | chr7_3:79266171-79266190 | Msa1127650:intron | 40.0% | |
GTACTACTCTTCATGCACAT+TGG | - | chr7_3:79266210-79266229 | Msa1127650:intron | 40.0% | |
GCCTCAAAATTCTGTGTACA+CGG | - | chr7_3:79266270-79266289 | Msa1127650:intron | 40.0% | |
! | TCCGTGTACACAGAATTTTG+AGG | + | chr7_3:79266274-79266293 | None:intergenic | 40.0% |
GACGTGAATCATTTACCGTT+AGG | - | chr7_3:79266313-79266332 | Msa1127650:intron | 40.0% | |
GTTGTCCAAGATATTGCAAG+AGG | - | chr7_3:79266365-79266384 | Msa1127650:intron | 40.0% | |
! | GAGGCATTTGACATAGTTGA+TGG | - | chr7_3:79266384-79266403 | Msa1127650:intron | 40.0% |
! | GGCATTTGACATAGTTGATG+GGG | - | chr7_3:79266386-79266405 | Msa1127650:intron | 40.0% |
!! | GCATTTGACATAGTTGATGG+GGG | - | chr7_3:79266387-79266406 | Msa1127650:intron | 40.0% |
GAGCAGAAATTTGAAAGCAG+AGG | + | chr7_3:79266506-79266525 | None:intergenic | 40.0% | |
GAATAAAGCCAAAGCTCTCA+AGG | - | chr7_3:79266527-79266546 | Msa1127650:three_prime_UTR | 40.0% | |
TGATCGACTACTATGAAGTC+TGG | + | chr7_3:79266586-79266605 | None:intergenic | 40.0% | |
CATATTGTACAGATCGGTAG+TGG | - | chr7_3:79266712-79266731 | Msa1127650:intron | 40.0% | |
TATTGTACAGATCGGTAGTG+GGG | - | chr7_3:79266714-79266733 | Msa1127650:intron | 40.0% | |
CGAACATACAACTTTCCTCA+AGG | - | chr7_3:79266754-79266773 | Msa1127650:CDS | 40.0% | |
CGTGTAACTGATCATAGAGT+TGG | - | chr7_3:79266778-79266797 | Msa1127650:CDS | 40.0% | |
AACATAGACGATGTGATGCA+AGG | - | chr7_3:79266814-79266833 | Msa1127650:intron | 40.0% | |
GTTATTCTGTTCGAGATGCT+AGG | - | chr7_3:79266996-79267015 | Msa1127650:CDS | 40.0% | |
CGTTTCGGCTAAGCTGAAAA+TGG | + | chr7_3:79260308-79260327 | None:intergenic | 45.0% | |
CAGTTCAGTGTGTGAAAGAG+AGG | - | chr7_3:79260400-79260419 | Msa1127650:three_prime_UTR | 45.0% | |
CGGAAGAGTAAAGACGAAAC+CGG | + | chr7_3:79260526-79260545 | None:intergenic | 45.0% | |
CGGTTTCGTCTTTACTCTTC+CGG | - | chr7_3:79260524-79260543 | Msa1127650:three_prime_UTR | 45.0% | |
TACTCTGACTGTGACGTTTC+TGG | + | chr7_3:79260833-79260852 | None:intergenic | 45.0% | |
CACTGTGTCAAACACCAAAC+AGG | - | chr7_3:79261054-79261073 | Msa1127650:intron | 45.0% | |
CTTCTAATCGAAGGCCTGTT+TGG | + | chr7_3:79261071-79261090 | None:intergenic | 45.0% | |
!! | ATTCAAGGAGGAGTGTTGAC+TGG | + | chr7_3:79261545-79261564 | None:intergenic | 45.0% |
AAGGAAGGAAGGATTCAGGT+TGG | + | chr7_3:79262138-79262157 | None:intergenic | 45.0% | |
ACACAAGGAAGGAAGGATTC+AGG | + | chr7_3:79262142-79262161 | None:intergenic | 45.0% | |
CTGTTGTACACAAGGAAGGA+AGG | + | chr7_3:79262149-79262168 | None:intergenic | 45.0% | |
CATGCTGTTGTACACAAGGA+AGG | + | chr7_3:79262153-79262172 | None:intergenic | 45.0% | |
CGAAGTAAAAGGCAAGGGAA+CGG | + | chr7_3:79262397-79262416 | None:intergenic | 45.0% | |
GGCGCACTTATCGAAGTAAA+AGG | + | chr7_3:79262408-79262427 | None:intergenic | 45.0% | |
GCTCACGATCATAAGTCATG+TGG | - | chr7_3:79262478-79262497 | Msa1127650:three_prime_UTR | 45.0% | |
GGCTGCTGAAGATCAAACTT+TGG | + | chr7_3:79262583-79262602 | None:intergenic | 45.0% | |
TCAACATCAGGGAGAAGCTA+AGG | + | chr7_3:79262604-79262623 | None:intergenic | 45.0% | |
GTGTTGTCAGTTAGGACATG+TGG | + | chr7_3:79262643-79262662 | None:intergenic | 45.0% | |
ATCCACCAAACAGATGTTGG+TGG | + | chr7_3:79262689-79262708 | None:intergenic | 45.0% | |
! | ACCAACATCTGTTTGGTGGA+TGG | - | chr7_3:79262688-79262707 | Msa1127650:intron | 45.0% |
ACCATCCACCAAACAGATGT+TGG | + | chr7_3:79262692-79262711 | None:intergenic | 45.0% | |
AGAGACTTGTATTGCTGCTC+TGG | - | chr7_3:79262743-79262762 | Msa1127650:intron | 45.0% | |
GATAAGGTCTGAAGGTTCAG+TGG | + | chr7_3:79262827-79262846 | None:intergenic | 45.0% | |
CGAAGCAACTATCACTTCCT+TGG | + | chr7_3:79262926-79262945 | None:intergenic | 45.0% | |
! | AAGGATGGAGGCGTATTTAG+AGG | + | chr7_3:79263364-79263383 | None:intergenic | 45.0% |
TCATATATGGGCAGCAAGGA+TGG | + | chr7_3:79263379-79263398 | None:intergenic | 45.0% | |
! | AGGTAATGGTAGGGCTTTGT+AGG | - | chr7_3:79263419-79263438 | Msa1127650:intron | 45.0% |
! | TCTAGAGCCTTCTTCTTGGA+GGG | + | chr7_3:79263527-79263546 | None:intergenic | 45.0% |
! | ATCTAGAGCCTTCTTCTTGG+AGG | + | chr7_3:79263528-79263547 | None:intergenic | 45.0% |
! | GGTATCTAGAGCCTTCTTCT+TGG | + | chr7_3:79263531-79263550 | None:intergenic | 45.0% |
TATCCTTCATATAAGCGGGG+GGG | - | chr7_3:79263854-79263873 | Msa1127650:intron | 45.0% | |
GGTGAACACAAAACTGAAGC+AGG | + | chr7_3:79263906-79263925 | None:intergenic | 45.0% | |
GATACTCACACAGAACTGCA+AGG | + | chr7_3:79264307-79264326 | None:intergenic | 45.0% | |
CAGTTCTGTGTGAGTATCTG+TGG | - | chr7_3:79264309-79264328 | Msa1127650:intron | 45.0% | |
AGCCATCAATTTCCTGCAGA+TGG | + | chr7_3:79264421-79264440 | None:intergenic | 45.0% | |
GTAGGGAGACAAAAGCAAAC+AGG | + | chr7_3:79264726-79264745 | None:intergenic | 45.0% | |
!!! | TACAATTTTGCAGGCACTGG+TGG | - | chr7_3:79264777-79264796 | Msa1127650:intron | 45.0% |
!!! | ACAATTTTGCAGGCACTGGT+GGG | - | chr7_3:79264778-79264797 | Msa1127650:intron | 45.0% |
TTTCAGCATCCAACATGCAC+TGG | - | chr7_3:79265079-79265098 | Msa1127650:intron | 45.0% | |
TGCTACAGACTACAAACGGA+AGG | + | chr7_3:79265139-79265158 | None:intergenic | 45.0% | |
!! | ACGGTGCTACAGACTACAAA+CGG | + | chr7_3:79265143-79265162 | None:intergenic | 45.0% |
GGTTTGGACCTCAATTTCTC+AGG | - | chr7_3:79265193-79265212 | Msa1127650:intron | 45.0% | |
TTGGACCTCAATTTCTCAGG+AGG | - | chr7_3:79265196-79265215 | Msa1127650:intron | 45.0% | |
AGTAGCCTCCTGAGAAATTG+AGG | + | chr7_3:79265204-79265223 | None:intergenic | 45.0% | |
ACTGCAGCTATTGTAGGAGT+TGG | - | chr7_3:79265221-79265240 | Msa1127650:intron | 45.0% | |
AGTTCCCGTGACCGAAAAAT+TGG | - | chr7_3:79265369-79265388 | Msa1127650:intron | 45.0% | |
GTTCCCGTGACCGAAAAATT+GGG | - | chr7_3:79265370-79265389 | Msa1127650:intron | 45.0% | |
!! | ACGTCCCAATTTTTCGGTCA+CGG | + | chr7_3:79265377-79265396 | None:intergenic | 45.0% |
AATTGCAACGGAAACAGCAC+TGG | + | chr7_3:79265407-79265426 | None:intergenic | 45.0% | |
!! | TGGTTTCCTTTGGCTCTGTT+AGG | - | chr7_3:79265608-79265627 | Msa1127650:intron | 45.0% |
CATCAACCTAACAGAGCCAA+AGG | + | chr7_3:79265617-79265636 | None:intergenic | 45.0% | |
!! | GGCTCTGTTAGGTTGATGAA+TGG | - | chr7_3:79265619-79265638 | Msa1127650:intron | 45.0% |
TTCTATAGATCCGGTGGTTC+AGG | - | chr7_3:79265771-79265790 | Msa1127650:intron | 45.0% | |
ATAGCAATCACGATCCCAGT+TGG | + | chr7_3:79265846-79265865 | None:intergenic | 45.0% | |
AGATGAGCGTTCTCAGCATA+TGG | - | chr7_3:79265869-79265888 | Msa1127650:intron | 45.0% | |
!! | GACATAGTTGATGGGGGATT+TGG | - | chr7_3:79266393-79266412 | Msa1127650:intron | 45.0% |
! | TTGAAAGCAGAGGGCACATA+AGG | + | chr7_3:79266496-79266515 | None:intergenic | 45.0% |
ACACAGTACCTTGAGAGCTT+TGG | + | chr7_3:79266538-79266557 | None:intergenic | 45.0% | |
ATCAAAGCTTCGATCAGAGC+AGG | - | chr7_3:79266602-79266621 | Msa1127650:CDS | 45.0% | |
GTTCTTCTACGTAAGCCAGT+GGG | - | chr7_3:79266905-79266924 | Msa1127650:intron | 45.0% | |
AAGGAGCTTCGAAAGCTCAG+TGG | - | chr7_3:79260866-79260885 | Msa1127650:three_prime_UTR | 50.0% | |
GTGTCTGCGTTTGTGCTTCA+CGG | + | chr7_3:79260948-79260967 | None:intergenic | 50.0% | |
TCGTGTAAGTGTCTTGGGAG+AGG | - | chr7_3:79261110-79261129 | Msa1127650:intron | 50.0% | |
GTTGCTGTCATGGAACCAGA+AGG | + | chr7_3:79261622-79261641 | None:intergenic | 50.0% | |
GGAAAGCCTGGAACCAAAAC+AGG | + | chr7_3:79262007-79262026 | None:intergenic | 50.0% | |
TCCATCTATCGTGAACGCTG+CGG | + | chr7_3:79262097-79262116 | None:intergenic | 50.0% | |
CAGCGTTCACGATAGATGGA+TGG | - | chr7_3:79262097-79262116 | Msa1127650:intron | 50.0% | |
CGTTCACGATAGATGGATGG+TGG | - | chr7_3:79262100-79262119 | Msa1127650:intron | 50.0% | |
! | TCACGATAGATGGATGGTGG+AGG | - | chr7_3:79262103-79262122 | Msa1127650:intron | 50.0% |
GAAAGGCAAGAGCTTTGCCT+TGG | + | chr7_3:79262196-79262215 | None:intergenic | 50.0% | |
TATAAGCCAACTCTCTCGGG+TGG | - | chr7_3:79262518-79262537 | Msa1127650:intron | 50.0% | |
GGTCTCCACCAACATCTGTT+TGG | - | chr7_3:79262681-79262700 | Msa1127650:intron | 50.0% | |
CTCCACCAACATCTGTTTGG+TGG | - | chr7_3:79262684-79262703 | Msa1127650:intron | 50.0% | |
AGGTCTGAAGGTTCAGTGGA+AGG | + | chr7_3:79262823-79262842 | None:intergenic | 50.0% | |
TATATGGGCAGCAAGGATGG+AGG | + | chr7_3:79263376-79263395 | None:intergenic | 50.0% | |
CACAAGTCCCTCCAAGAAGA+AGG | - | chr7_3:79263517-79263536 | Msa1127650:intron | 50.0% | |
ATCCTTCATATAAGCGGGGG+GGG | - | chr7_3:79263855-79263874 | Msa1127650:intron | 50.0% | |
TCCTTTCTTCCTCTATGGCC+TGG | + | chr7_3:79264511-79264530 | None:intergenic | 50.0% | |
!! | TGCATTTTGGAGGTACGAGC+AGG | - | chr7_3:79264590-79264609 | Msa1127650:intron | 50.0% |
!!! | CAATTTTGCAGGCACTGGTG+GGG | - | chr7_3:79264779-79264798 | Msa1127650:intron | 50.0% |
GAGGCTACTGCAGCTATTGT+AGG | - | chr7_3:79265215-79265234 | Msa1127650:intron | 50.0% | |
!! | CGTCCCAATTTTTCGGTCAC+GGG | + | chr7_3:79265376-79265395 | None:intergenic | 50.0% |
TTCCGTTGCAATTCTCCCAC+AGG | - | chr7_3:79265414-79265433 | Msa1127650:intron | 50.0% | |
AGCCTGTGGGAGAATTGCAA+CGG | + | chr7_3:79265419-79265438 | None:intergenic | 50.0% | |
AATTCTCCCACAGGCTGATG+AGG | - | chr7_3:79265423-79265442 | Msa1127650:intron | 50.0% | |
TATAGATCCGGTGGTTCAGG+TGG | - | chr7_3:79265774-79265793 | Msa1127650:intron | 50.0% | |
TGATCAGTTACACGGCCTTG+AGG | + | chr7_3:79266772-79266791 | None:intergenic | 50.0% | |
CGTTCTTCTACGTAAGCCAG+TGG | - | chr7_3:79266904-79266923 | Msa1127650:intron | 50.0% | |
AAGGTGCGACGTTGCTGTCA+TGG | + | chr7_3:79261632-79261651 | None:intergenic | 55.0% | |
! | TTTGGTTCCAGGCTTTCCCC+TGG | - | chr7_3:79262009-79262028 | Msa1127650:intron | 55.0% |
ACTTGTTCCAGGGGAAAGCC+TGG | + | chr7_3:79262019-79262038 | None:intergenic | 55.0% | |
CCATCTATCGTGAACGCTGC+GGG | + | chr7_3:79262096-79262115 | None:intergenic | 55.0% | |
! | TGACCTCTGGGAAGCTGTTG+AGG | + | chr7_3:79263337-79263356 | None:intergenic | 55.0% |
TCCTTCATATAAGCGGGGGG+GGG | - | chr7_3:79263856-79263875 | Msa1127650:intron | 55.0% | |
CCTTCACCCAGGTTCAAACC+CGG | - | chr7_3:79264279-79264298 | Msa1127650:intron | 55.0% | |
CTTCACCCAGGTTCAAACCC+GGG | - | chr7_3:79264280-79264299 | Msa1127650:intron | 55.0% | |
AAGGTCCCGGGTTTGAACCT+GGG | + | chr7_3:79264288-79264307 | None:intergenic | 55.0% | |
ACACAGAACTGCAAGGTCCC+GGG | + | chr7_3:79264300-79264319 | None:intergenic | 55.0% | |
CACACAGAACTGCAAGGTCC+CGG | + | chr7_3:79264301-79264320 | None:intergenic | 55.0% | |
GGCAACAGAGGAAATGAGCC+AGG | - | chr7_3:79264490-79264509 | Msa1127650:intron | 55.0% | |
GGAAATGAGCCAGGCCATAG+AGG | - | chr7_3:79264499-79264518 | Msa1127650:intron | 55.0% | |
GCCAGGCCATAGAGGAAGAA+AGG | - | chr7_3:79264507-79264526 | Msa1127650:intron | 55.0% | |
CGGAAGGTTCCAGTGCATGT+TGG | + | chr7_3:79265091-79265110 | None:intergenic | 55.0% | |
ATGCTGACCACCTGAACCAC+CGG | + | chr7_3:79265784-79265803 | None:intergenic | 55.0% | |
CTGTTCGAGATGCTAGGCAG+AGG | - | chr7_3:79267002-79267021 | Msa1127650:CDS | 55.0% | |
TGCTAGGCAGAGGAAGAGCA+TGG | - | chr7_3:79267012-79267031 | Msa1127650:exon | 55.0% | |
CCCGCAGCGTTCACGATAGA+TGG | - | chr7_3:79262093-79262112 | Msa1127650:intron | 60.0% | |
CCAACACCACCCGAGAGAGT+TGG | + | chr7_3:79262527-79262546 | None:intergenic | 60.0% | |
CCAACTCTCTCGGGTGGTGT+TGG | - | chr7_3:79262524-79262543 | Msa1127650:intron | 60.0% | |
! | ACTCTCTCGGGTGGTGTTGG+TGG | - | chr7_3:79262527-79262546 | Msa1127650:intron | 60.0% |
! | CCTCTGGGAAGCTGTTGAGG+AGG | + | chr7_3:79263334-79263353 | None:intergenic | 60.0% |
CCTCCTCAACAGCTTCCCAG+AGG | - | chr7_3:79263331-79263350 | Msa1127650:intron | 60.0% | |
ACCCCCCCCCGCTTATATGA+AGG | + | chr7_3:79263860-79263879 | None:intergenic | 60.0% | |
TTCATATAAGCGGGGGGGGG+TGG | - | chr7_3:79263859-79263878 | Msa1127650:intron | 60.0% | |
TCATATAAGCGGGGGGGGGT+GGG | - | chr7_3:79263860-79263879 | Msa1127650:intron | 60.0% | |
CCGGGTTTGAACCTGGGTGA+AGG | + | chr7_3:79264282-79264301 | None:intergenic | 60.0% | |
CAAGGTCCCGGGTTTGAACC+TGG | + | chr7_3:79264289-79264308 | None:intergenic | 60.0% | |
!!! | TTTTGCAGGCACTGGTGGGG+AGG | - | chr7_3:79264782-79264801 | Msa1127650:intron | 60.0% |
!! | TGCAGGCACTGGTGGGGAGG+AGG | - | chr7_3:79264785-79264804 | Msa1127650:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 79260277 | 79267177 | 79260277 | ID=Msa1127650;Name=Msa1127650 |
chr7_3 | mRNA | 79260277 | 79267177 | 79260277 | ID=Msa1127650-mRNA-1;Parent=Msa1127650;Name=Msa1127650-mRNA-1;_AED=0.21;_eAED=0.21;_QI=154|1|1|1|0.8|0.81|11|1269|84 |
chr7_3 | exon | 79260277 | 79260730 | 79260277 | ID=Msa1127650-mRNA-1:exon:22422;Parent=Msa1127650-mRNA-1 |
chr7_3 | exon | 79260831 | 79260926 | 79260831 | ID=Msa1127650-mRNA-1:exon:22421;Parent=Msa1127650-mRNA-1 |
chr7_3 | exon | 79261533 | 79261722 | 79261533 | ID=Msa1127650-mRNA-1:exon:22420;Parent=Msa1127650-mRNA-1 |
chr7_3 | exon | 79262010 | 79262087 | 79262010 | ID=Msa1127650-mRNA-1:exon:22419;Parent=Msa1127650-mRNA-1 |
chr7_3 | exon | 79262165 | 79262239 | 79262165 | ID=Msa1127650-mRNA-1:exon:22418;Parent=Msa1127650-mRNA-1 |
chr7_3 | exon | 79262453 | 79262531 | 79262453 | ID=Msa1127650-mRNA-1:exon:22417;Parent=Msa1127650-mRNA-1 |
chr7_3 | exon | 79262616 | 79262664 | 79262616 | ID=Msa1127650-mRNA-1:exon:22416;Parent=Msa1127650-mRNA-1 |
chr7_3 | exon | 79262843 | 79263026 | 79262843 | ID=Msa1127650-mRNA-1:exon:22415;Parent=Msa1127650-mRNA-1 |
chr7_3 | exon | 79266526 | 79266628 | 79266526 | ID=Msa1127650-mRNA-1:exon:22414;Parent=Msa1127650-mRNA-1 |
chr7_3 | exon | 79266726 | 79266826 | 79266726 | ID=Msa1127650-mRNA-1:exon:22413;Parent=Msa1127650-mRNA-1 |
chr7_3 | exon | 79266909 | 79267177 | 79266909 | ID=Msa1127650-mRNA-1:exon:22412;Parent=Msa1127650-mRNA-1 |
chr7_3 | five_prime_UTR | 79267024 | 79267177 | 79267024 | ID=Msa1127650-mRNA-1:five_prime_utr;Parent=Msa1127650-mRNA-1 |
chr7_3 | CDS | 79266909 | 79267023 | 79266909 | ID=Msa1127650-mRNA-1:cds;Parent=Msa1127650-mRNA-1 |
chr7_3 | CDS | 79266726 | 79266826 | 79266726 | ID=Msa1127650-mRNA-1:cds;Parent=Msa1127650-mRNA-1 |
chr7_3 | CDS | 79266590 | 79266628 | 79266590 | ID=Msa1127650-mRNA-1:cds;Parent=Msa1127650-mRNA-1 |
chr7_3 | three_prime_UTR | 79266526 | 79266589 | 79266526 | ID=Msa1127650-mRNA-1:three_prime_utr;Parent=Msa1127650-mRNA-1 |
chr7_3 | three_prime_UTR | 79262843 | 79263026 | 79262843 | ID=Msa1127650-mRNA-1:three_prime_utr;Parent=Msa1127650-mRNA-1 |
chr7_3 | three_prime_UTR | 79262616 | 79262664 | 79262616 | ID=Msa1127650-mRNA-1:three_prime_utr;Parent=Msa1127650-mRNA-1 |
chr7_3 | three_prime_UTR | 79262453 | 79262531 | 79262453 | ID=Msa1127650-mRNA-1:three_prime_utr;Parent=Msa1127650-mRNA-1 |
chr7_3 | three_prime_UTR | 79262165 | 79262239 | 79262165 | ID=Msa1127650-mRNA-1:three_prime_utr;Parent=Msa1127650-mRNA-1 |
chr7_3 | three_prime_UTR | 79262010 | 79262087 | 79262010 | ID=Msa1127650-mRNA-1:three_prime_utr;Parent=Msa1127650-mRNA-1 |
chr7_3 | three_prime_UTR | 79261533 | 79261722 | 79261533 | ID=Msa1127650-mRNA-1:three_prime_utr;Parent=Msa1127650-mRNA-1 |
chr7_3 | three_prime_UTR | 79260831 | 79260926 | 79260831 | ID=Msa1127650-mRNA-1:three_prime_utr;Parent=Msa1127650-mRNA-1 |
chr7_3 | three_prime_UTR | 79260277 | 79260730 | 79260277 | ID=Msa1127650-mRNA-1:three_prime_utr;Parent=Msa1127650-mRNA-1 |
Gene Sequence |
Protein sequence |