Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643220 | XP_003606405.1 | 92.593 | 189 | 4 | 2 | 1 | 189 | 1 | 179 | 1.89e-119 | 345 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643220 | sp|Q9LN09|DPB31_ARATH | 49.000 | 100 | 50 | 1 | 81 | 180 | 99 | 197 | 2.03e-26 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0643220 | TF | NF-YC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0643220 | 0.848804 | 4.852937e-60 | -8.615850e-47 |
| Msa0004860 | Msa0643220 | 0.824310 | 8.650149e-54 | -8.615850e-47 |
| Msa0004920 | Msa0643220 | 0.816925 | 4.299940e-52 | -8.615850e-47 |
| Msa0006290 | Msa0643220 | 0.803635 | 3.173654e-49 | -8.615850e-47 |
| Msa0016670 | Msa0643220 | 0.819132 | 1.363887e-52 | -8.615850e-47 |
| Msa0017510 | Msa0643220 | 0.830068 | 3.615165e-55 | -8.615850e-47 |
| Msa0025730 | Msa0643220 | 0.804040 | 2.614259e-49 | -8.615850e-47 |
| Msa0028640 | Msa0643220 | 0.801784 | 7.645588e-49 | -8.615850e-47 |
| Msa0030430 | Msa0643220 | 0.800745 | 1.247707e-48 | -8.615850e-47 |
| Msa0032090 | Msa0643220 | 0.807289 | 5.435990e-50 | -8.615850e-47 |
| Msa0032260 | Msa0643220 | 0.834045 | 3.760083e-56 | -8.615850e-47 |
| Msa0032430 | Msa0643220 | 0.817994 | 2.470121e-52 | -8.615850e-47 |
| Msa0040450 | Msa0643220 | 0.827182 | 1.801301e-54 | -8.615850e-47 |
| Msa0040690 | Msa0643220 | 0.823066 | 1.691763e-53 | -8.615850e-47 |
| Msa0044020 | Msa0643220 | 0.822262 | 2.602825e-53 | -8.615850e-47 |
| Msa0047050 | Msa0643220 | 0.807968 | 3.900434e-50 | -8.615850e-47 |
| Msa0047160 | Msa0643220 | 0.801156 | 1.028476e-48 | -8.615850e-47 |
| Msa0051770 | Msa0643220 | 0.816450 | 5.496498e-52 | -8.615850e-47 |
| Msa0054440 | Msa0643220 | 0.802099 | 6.589177e-49 | -8.615850e-47 |
| Msa0054480 | Msa0643220 | 0.807252 | 5.534969e-50 | -8.615850e-47 |
| Msa0067620 | Msa0643220 | 0.810711 | 1.006472e-50 | -8.615850e-47 |
| Msa0073480 | Msa0643220 | 0.829522 | 4.910999e-55 | -8.615850e-47 |
| Msa0076000 | Msa0643220 | 0.840409 | 8.849661e-58 | -8.615850e-47 |
| Msa0078650 | Msa0643220 | 0.801865 | 7.357794e-49 | -8.615850e-47 |
| Msa0090590 | Msa0643220 | 0.815613 | 8.450288e-52 | -8.615850e-47 |
| Msa0094120 | Msa0643220 | 0.849690 | 2.751039e-60 | -8.615850e-47 |
| Msa0094470 | Msa0643220 | 0.828134 | 1.064158e-54 | -8.615850e-47 |
| Msa0094920 | Msa0643220 | 0.806362 | 8.533467e-50 | -8.615850e-47 |
| Msa0100300 | Msa0643220 | 0.809049 | 2.292997e-50 | -8.615850e-47 |
| Msa0101700 | Msa0643220 | 0.802316 | 5.945239e-49 | -8.615850e-47 |
| Msa0110970 | Msa0643220 | 0.836783 | 7.643061e-57 | -8.615850e-47 |
| Msa0113970 | Msa0643220 | 0.804989 | 1.657657e-49 | -8.615850e-47 |
| Msa0607050 | Msa0643220 | 0.811928 | 5.477754e-51 | -8.615850e-47 |
| Msa0610430 | Msa0643220 | 0.811247 | 7.701884e-51 | -8.615850e-47 |
| Msa0615440 | Msa0643220 | 0.826043 | 3.368932e-54 | -8.615850e-47 |
| Msa0615870 | Msa0643220 | 0.803294 | 3.734595e-49 | -8.615850e-47 |
| Msa0616020 | Msa0643220 | 0.812631 | 3.847301e-51 | -8.615850e-47 |
| Msa0616220 | Msa0643220 | 0.821591 | 3.721089e-53 | -8.615850e-47 |
| Msa0619070 | Msa0643220 | 0.810246 | 1.267948e-50 | -8.615850e-47 |
| Msa0623700 | Msa0643220 | 0.821586 | 3.731477e-53 | -8.615850e-47 |
| Msa0625070 | Msa0643220 | 0.815452 | 9.178850e-52 | -8.615850e-47 |
| Msa0625720 | Msa0643220 | 0.815792 | 7.711733e-52 | -8.615850e-47 |
| Msa0631120 | Msa0643220 | 0.807817 | 4.199776e-50 | -8.615850e-47 |
| Msa0633840 | Msa0643220 | 0.824797 | 6.644793e-54 | -8.615850e-47 |
| Msa0638070 | Msa0643220 | 0.803876 | 2.827995e-49 | -8.615850e-47 |
| Msa0639430 | Msa0643220 | 0.815230 | 1.028216e-51 | -8.615850e-47 |
| Msa0641190 | Msa0643220 | 0.826478 | 2.653571e-54 | -8.615850e-47 |
| Msa0643220 | Msa0644840 | 0.800854 | 1.185569e-48 | -8.615850e-47 |
| Msa0643220 | Msa0650020 | 0.806201 | 9.226243e-50 | -8.615850e-47 |
| Msa0643220 | Msa0655560 | 0.808381 | 3.185386e-50 | -8.615850e-47 |
| Msa0643220 | Msa0657580 | 0.805593 | 1.238492e-49 | -8.615850e-47 |
| Msa0643220 | Msa0657970 | 0.829534 | 4.878762e-55 | -8.615850e-47 |
| Msa0643220 | Msa0663390 | 0.824947 | 6.123486e-54 | -8.615850e-47 |
| Msa0643220 | Msa0669340 | 0.809001 | 2.347418e-50 | -8.615850e-47 |
| Msa0643220 | Msa0682330 | 0.821573 | 3.757047e-53 | -8.615850e-47 |
| Msa0643220 | Msa0682900 | 0.964168 | 5.475294e-123 | -8.615850e-47 |
| Msa0643220 | Msa0684500 | 0.821283 | 4.383947e-53 | -8.615850e-47 |
| Msa0643220 | Msa0689010 | 0.804780 | 1.832679e-49 | -8.615850e-47 |
| Msa0643220 | Msa0689260 | 0.801691 | 7.988802e-49 | -8.615850e-47 |
| Msa0643220 | Msa0690150 | 0.812222 | 4.725055e-51 | -8.615850e-47 |
| Msa0643220 | Msa0691380 | 0.805776 | 1.133728e-49 | -8.615850e-47 |
| Msa0643220 | Msa0691900 | 0.804773 | 1.839373e-49 | -8.615850e-47 |
| Msa0643220 | Msa0693380 | 0.816060 | 6.719637e-52 | -8.615850e-47 |
| Msa0643220 | Msa0698060 | 0.833471 | 5.232370e-56 | -8.615850e-47 |
| Msa0643220 | Msa0698490 | 0.828339 | 9.499261e-55 | -8.615850e-47 |
| Msa0643220 | Msa0698660 | 0.833358 | 5.584789e-56 | -8.615850e-47 |
| Msa0643220 | Msa0699550 | 0.810649 | 1.037641e-50 | -8.615850e-47 |
| Msa0643220 | Msa0703230 | 0.843545 | 1.312227e-58 | -8.615850e-47 |
| Msa0643220 | Msa0704600 | 0.812237 | 4.689574e-51 | -8.615850e-47 |
| Msa0643220 | Msa0708520 | 0.851938 | 6.403080e-61 | -8.615850e-47 |
| Msa0643220 | Msa0709500 | 0.844658 | 6.595867e-59 | -8.615850e-47 |
| Msa0643220 | Msa0711780 | 0.825866 | 3.711243e-54 | -8.615850e-47 |
| Msa0643220 | Msa0715700 | 0.800661 | 1.297892e-48 | -8.615850e-47 |
| Msa0643220 | Msa0720820 | 0.812912 | 3.339125e-51 | -8.615850e-47 |
| Msa0643220 | Msa0724830 | 0.831946 | 1.250796e-55 | -8.615850e-47 |
| Msa0643220 | Msa0742380 | 0.805839 | 1.099597e-49 | -8.615850e-47 |
| Msa0643220 | Msa0744040 | 0.811177 | 7.976426e-51 | -8.615850e-47 |
| Msa0643220 | Msa0745790 | 0.810335 | 1.213389e-50 | -8.615850e-47 |
| Msa0643220 | Msa0750430 | 0.803827 | 2.894590e-49 | -8.615850e-47 |
| Msa0643220 | Msa0750880 | 0.849853 | 2.475841e-60 | -8.615850e-47 |
| Msa0643220 | Msa0760380 | 0.818667 | 1.739302e-52 | -8.615850e-47 |
| Msa0643220 | Msa0761940 | 0.809356 | 1.970195e-50 | -8.615850e-47 |
| Msa0643220 | Msa0770200 | 0.839486 | 1.540059e-57 | -8.615850e-47 |
| Msa0643220 | Msa0790850 | 0.850064 | 2.161352e-60 | -8.615850e-47 |
| Msa0643220 | Msa0794670 | 0.832341 | 9.992727e-56 | -8.615850e-47 |
| Msa0643220 | Msa0796530 | 0.865275 | 6.643791e-65 | -8.615850e-47 |
| Msa0643220 | Msa0803890 | 0.805418 | 1.348030e-49 | -8.615850e-47 |
| Msa0643220 | Msa0808270 | 0.850989 | 1.188454e-60 | -8.615850e-47 |
| Msa0643220 | Msa0813720 | 0.804175 | 2.450656e-49 | -8.615850e-47 |
| Msa0643220 | Msa0813740 | 0.819953 | 8.858449e-53 | -8.615850e-47 |
| Msa0643220 | Msa0816700 | 0.815940 | 7.146728e-52 | -8.615850e-47 |
| Msa0643220 | Msa0841940 | 0.808096 | 3.662818e-50 | -8.615850e-47 |
| Msa0643220 | Msa0850960 | 0.837533 | 4.914040e-57 | -8.615850e-47 |
| Msa0643220 | Msa0856920 | 0.811191 | 7.920712e-51 | -8.615850e-47 |
| Msa0643220 | Msa0869100 | 0.802464 | 5.540080e-49 | -8.615850e-47 |
| Msa0643220 | Msa0871400 | 0.805535 | 1.273794e-49 | -8.615850e-47 |
| Msa0643220 | Msa0876200 | 0.832707 | 8.105627e-56 | -8.615850e-47 |
| Msa0643220 | Msa0880140 | 0.828403 | 9.164599e-55 | -8.615850e-47 |
| Msa0643220 | Msa0888320 | 0.801890 | 7.273940e-49 | -8.615850e-47 |
| Msa0643220 | Msa0902760 | 0.844000 | 9.908825e-59 | -8.615850e-47 |
| Msa0643220 | Msa0932660 | -0.800544 | 1.371516e-48 | -8.615850e-47 |
| Msa0643220 | Msa0938220 | 0.804898 | 1.731716e-49 | -8.615850e-47 |
| Msa0643220 | Msa0944190 | 0.805987 | 1.023492e-49 | -8.615850e-47 |
| Msa0643220 | Msa0945970 | 0.819439 | 1.160750e-52 | -8.615850e-47 |
| Msa0643220 | Msa0954130 | 0.809342 | 1.984142e-50 | -8.615850e-47 |
| Msa0643220 | Msa0959050 | 0.802216 | 6.234261e-49 | -8.615850e-47 |
| Msa0643220 | Msa0968590 | 0.833056 | 6.640829e-56 | -8.615850e-47 |
| Msa0643220 | Msa0970030 | 0.826571 | 2.521931e-54 | -8.615850e-47 |
| Msa0643220 | Msa0970570 | -0.806356 | 8.561247e-50 | -8.615850e-47 |
| Msa0643220 | Msa0993600 | 0.803134 | 4.030407e-49 | -8.615850e-47 |
| Msa0643220 | Msa1006840 | 0.830257 | 3.251336e-55 | -8.615850e-47 |
| Msa0643220 | Msa1013400 | 0.846279 | 2.399186e-59 | -8.615850e-47 |
| Msa0643220 | Msa1014420 | 0.826688 | 2.364584e-54 | -8.615850e-47 |
| Msa0643220 | Msa1040400 | 0.817035 | 4.063342e-52 | -8.615850e-47 |
| Msa0643220 | Msa1041210 | 0.806418 | 8.306221e-50 | -8.615850e-47 |
| Msa0643220 | Msa1046020 | 0.811602 | 6.450389e-51 | -8.615850e-47 |
| Msa0643220 | Msa1046060 | 0.806725 | 7.154796e-50 | -8.615850e-47 |
| Msa0643220 | Msa1063950 | 0.800963 | 1.126442e-48 | -8.615850e-47 |
| Msa0643220 | Msa1081150 | 0.836431 | 9.393894e-57 | -8.615850e-47 |
| Msa0643220 | Msa1082500 | 0.834977 | 2.193619e-56 | -8.615850e-47 |
| Msa0643220 | Msa1082700 | 0.805686 | 1.183999e-49 | -8.615850e-47 |
| Msa0643220 | Msa1083150 | 0.802198 | 6.285999e-49 | -8.615850e-47 |
| Msa0643220 | Msa1083210 | 0.802986 | 4.323124e-49 | -8.615850e-47 |
| Msa0643220 | Msa1084470 | 0.828427 | 9.043963e-55 | -8.615850e-47 |
| Msa0643220 | Msa1085200 | 0.804104 | 2.535199e-49 | -8.615850e-47 |
| Msa0643220 | Msa1093530 | 0.842033 | 3.310538e-58 | -8.615850e-47 |
| Msa0643220 | Msa1098400 | 0.811412 | 7.091569e-51 | -8.615850e-47 |
| Msa0643220 | Msa1098420 | 0.804317 | 2.289147e-49 | -8.615850e-47 |
| Msa0643220 | Msa1104140 | 0.830972 | 2.173238e-55 | -8.615850e-47 |
| Msa0643220 | Msa1108160 | 0.808337 | 3.254724e-50 | -8.615850e-47 |
| Msa0643220 | Msa1111110 | 0.811053 | 8.484464e-51 | -8.615850e-47 |
| Msa0643220 | Msa1119200 | 0.819671 | 1.027536e-52 | -8.615850e-47 |
| Msa0643220 | Msa1121440 | 0.834166 | 3.507212e-56 | -8.615850e-47 |
| Msa0643220 | Msa1125760 | 0.838825 | 2.284638e-57 | -8.615850e-47 |
| Msa0643220 | Msa1126510 | 0.806724 | 7.156951e-50 | -8.615850e-47 |
| Msa0643220 | Msa1127890 | 0.841326 | 5.086087e-58 | -8.615850e-47 |
| Msa0643220 | Msa1139810 | 0.811874 | 5.629059e-51 | -8.615850e-47 |
| Msa0643220 | Msa1147900 | 0.836482 | 9.119407e-57 | -8.615850e-47 |
| Msa0643220 | Msa1151910 | 0.804626 | 1.973655e-49 | -8.615850e-47 |
| Msa0643220 | Msa1165870 | 0.814970 | 1.174414e-51 | -8.615850e-47 |
| Msa0643220 | Msa1171360 | 0.844507 | 7.243092e-59 | -8.615850e-47 |
| Msa0643220 | Msa1179460 | 0.800337 | 1.511139e-48 | -8.615850e-47 |
| Msa0643220 | Msa1187840 | 0.836030 | 1.188017e-56 | -8.615850e-47 |
| Msa0643220 | Msa1199220 | 0.825584 | 4.328692e-54 | -8.615850e-47 |
| Msa0643220 | Msa1201650 | 0.809081 | 2.257300e-50 | -8.615850e-47 |
| Msa0643220 | Msa1207270 | 0.826840 | 2.175760e-54 | -8.615850e-47 |
| Msa0643220 | Msa1209460 | 0.826767 | 2.264755e-54 | -8.615850e-47 |
| Msa0643220 | Msa1209760 | 0.807655 | 4.546666e-50 | -8.615850e-47 |
| Msa0643220 | Msa1217940 | 0.803062 | 4.169971e-49 | -8.615850e-47 |
| Msa0643220 | Msa1218600 | 0.861615 | 9.060574e-64 | -8.615850e-47 |
| Msa0643220 | Msa1231240 | 0.812730 | 3.659511e-51 | -8.615850e-47 |
| Msa0643220 | Msa1233890 | 0.814430 | 1.546602e-51 | -8.615850e-47 |
| Msa0643220 | Msa1237940 | 0.804821 | 1.796847e-49 | -8.615850e-47 |
| Msa0643220 | Msa1240180 | 0.806522 | 7.898556e-50 | -8.615850e-47 |
| Msa0643220 | Msa1242240 | 0.804053 | 2.597970e-49 | -8.615850e-47 |
| Msa0643220 | Msa1252190 | 0.805126 | 1.551748e-49 | -8.615850e-47 |
| Msa0643220 | Msa1252740 | 0.828841 | 7.185904e-55 | -8.615850e-47 |
| Msa0643220 | Msa1254610 | 0.812968 | 3.245783e-51 | -8.615850e-47 |
| Msa0643220 | Msa1255040 | -0.827730 | 1.331466e-54 | -8.615850e-47 |
| Msa0643220 | Msa1265630 | 0.800143 | 1.654870e-48 | -8.615850e-47 |
| Msa0643220 | Msa1271990 | 0.813326 | 2.708309e-51 | -8.615850e-47 |
| Msa0643220 | Msa1283170 | 0.804428 | 2.170926e-49 | -8.615850e-47 |
| Msa0643220 | Msa1283860 | 0.803619 | 3.197341e-49 | -8.615850e-47 |
| Msa0643220 | Msa1284260 | 0.801335 | 9.451844e-49 | -8.615850e-47 |
| Msa0643220 | Msa1292830 | 0.806550 | 7.790104e-50 | -8.615850e-47 |
| Msa0643220 | Msa1293280 | 0.805394 | 1.363701e-49 | -8.615850e-47 |
| Msa0643220 | Msa1295490 | -0.817302 | 3.539118e-52 | -8.615850e-47 |
| Msa0643220 | Msa1300490 | 0.813857 | 2.069485e-51 | -8.615850e-47 |
| Msa0643220 | Msa1306840 | 0.821875 | 3.198865e-53 | -8.615850e-47 |
| Msa0643220 | Msa1307950 | 0.812581 | 3.944979e-51 | -8.615850e-47 |
| Msa0643220 | Msa1308380 | 0.804020 | 2.639799e-49 | -8.615850e-47 |
| Msa0643220 | Msa1314340 | 0.806985 | 6.303932e-50 | -8.615850e-47 |
| Msa0643220 | Msa1316780 | 0.846482 | 2.113004e-59 | -8.615850e-47 |
| Msa0643220 | Msa1316830 | 0.830577 | 2.715116e-55 | -8.615850e-47 |
| Msa0643220 | Msa1320410 | 0.800041 | 1.735547e-48 | -8.615850e-47 |
| Msa0643220 | Msa1320620 | 0.812615 | 3.877775e-51 | -8.615850e-47 |
| Msa0643220 | Msa1333410 | 0.808335 | 3.257568e-50 | -8.615850e-47 |
| Msa0643220 | Msa1336110 | 0.801973 | 6.993269e-49 | -8.615850e-47 |
| Msa0643220 | Msa1336710 | 0.816024 | 6.844589e-52 | -8.615850e-47 |
| Msa0643220 | Msa1343070 | 0.850595 | 1.534242e-60 | -8.615850e-47 |
| Msa0643220 | Msa1346370 | 0.815028 | 1.140168e-51 | -8.615850e-47 |
| Msa0643220 | Msa1351730 | 0.803187 | 3.929103e-49 | -8.615850e-47 |
| Msa0643220 | Msa1353060 | 0.853685 | 2.029383e-61 | -8.615850e-47 |
| Msa0643220 | Msa1353980 | 0.823182 | 1.589867e-53 | -8.615850e-47 |
| Msa0643220 | Msa1356440 | 0.827286 | 1.701248e-54 | -8.615850e-47 |
| Msa0643220 | Msa1358250 | 0.809016 | 2.329776e-50 | -8.615850e-47 |
| Msa0643220 | Msa1359390 | 0.812435 | 4.244953e-51 | -8.615850e-47 |
| Msa0643220 | Msa1366600 | 0.824145 | 9.459292e-54 | -8.615850e-47 |
| Msa0643220 | Msa1371430 | 0.804670 | 1.932129e-49 | -8.615850e-47 |
| Msa0643220 | Msa1374120 | 0.819540 | 1.100653e-52 | -8.615850e-47 |
| Msa0643220 | Msa1375560 | 0.803248 | 3.816226e-49 | -8.615850e-47 |
| Msa0643220 | Msa1379760 | 0.801459 | 8.917051e-49 | -8.615850e-47 |
| Msa0643220 | Msa1385670 | 0.828909 | 6.917298e-55 | -8.615850e-47 |
| Msa0643220 | Msa1386780 | 0.821759 | 3.404076e-53 | -8.615850e-47 |
| Msa0643220 | Msa1394290 | 0.840030 | 1.110983e-57 | -8.615850e-47 |
| Msa0643220 | Msa1394500 | 0.801489 | 8.789728e-49 | -8.615850e-47 |
| Msa0643220 | Msa1397810 | 0.822435 | 2.372049e-53 | -8.615850e-47 |
| Msa0643220 | Msa1407460 | 0.802705 | 4.942518e-49 | -8.615850e-47 |
| Msa0643220 | Msa1409870 | 0.810024 | 1.415755e-50 | -8.615850e-47 |
| Msa0643220 | Msa1415640 | 0.810688 | 1.017956e-50 | -8.615850e-47 |
| Msa0643220 | Msa1423350 | 0.824743 | 6.841071e-54 | -8.615850e-47 |
| Msa0643220 | Msa1427060 | 0.813438 | 2.559760e-51 | -8.615850e-47 |
| Msa0643220 | Msa1444310 | 0.821600 | 3.705164e-53 | -8.615850e-47 |
| Msa0643220 | Msa1445080 | 0.814263 | 1.684244e-51 | -8.615850e-47 |
| Msa0643220 | Msa1446830 | 0.817191 | 3.747073e-52 | -8.615850e-47 |
| Msa0643220 | Msa1448690 | 0.820785 | 5.709920e-53 | -8.615850e-47 |
| Msa0643220 | Msa1449820 | 0.812417 | 4.284016e-51 | -8.615850e-47 |
| Msa0643220 | Msa1457910 | 0.835026 | 2.131817e-56 | -8.615850e-47 |
| Msa0643220 | Msa1457920 | 0.814538 | 1.464200e-51 | -8.615850e-47 |
| Msa0643220 | Msa1460020 | 0.805402 | 1.358311e-49 | -8.615850e-47 |
| Msa0643220 | Msa1461280 | 0.805443 | 1.331808e-49 | -8.615850e-47 |
| Msa0643220 | Msa1463670 | 0.811046 | 8.513296e-51 | -8.615850e-47 |
| Msa0643220 | Msa1466300 | 0.811497 | 6.798766e-51 | -8.615850e-47 |
| Msa0121590 | Msa0643220 | 0.806018 | 1.008646e-49 | -8.615850e-47 |
| Msa0124340 | Msa0643220 | 0.832878 | 7.350259e-56 | -8.615850e-47 |
| Msa0127310 | Msa0643220 | 0.819546 | 1.097445e-52 | -8.615850e-47 |
| Msa0127820 | Msa0643220 | 0.802389 | 5.741326e-49 | -8.615850e-47 |
| Msa0136070 | Msa0643220 | 0.814788 | 1.288573e-51 | -8.615850e-47 |
| Msa0141340 | Msa0643220 | 0.815041 | 1.132491e-51 | -8.615850e-47 |
| Msa0142660 | Msa0643220 | 0.802576 | 5.255139e-49 | -8.615850e-47 |
| Msa0150820 | Msa0643220 | 0.800768 | 1.234336e-48 | -8.615850e-47 |
| Msa0157290 | Msa0643220 | 0.829954 | 3.854369e-55 | -8.615850e-47 |
| Msa0160550 | Msa0643220 | 0.810840 | 9.434340e-51 | -8.615850e-47 |
| Msa0172070 | Msa0643220 | 0.820335 | 7.241427e-53 | -8.615850e-47 |
| Msa0173990 | Msa0643220 | 0.820000 | 8.642920e-53 | -8.615850e-47 |
| Msa0184960 | Msa0643220 | 0.828789 | 7.396246e-55 | -8.615850e-47 |
| Msa0186890 | Msa0643220 | 0.841581 | 4.357460e-58 | -8.615850e-47 |
| Msa0187930 | Msa0643220 | 0.823841 | 1.114739e-53 | -8.615850e-47 |
| Msa0189290 | Msa0643220 | 0.816821 | 4.537841e-52 | -8.615850e-47 |
| Msa0193120 | Msa0643220 | 0.825817 | 3.810514e-54 | -8.615850e-47 |
| Msa0194540 | Msa0643220 | 0.829021 | 6.496171e-55 | -8.615850e-47 |
| Msa0195460 | Msa0643220 | 0.807038 | 6.144087e-50 | -8.615850e-47 |
| Msa0220580 | Msa0643220 | 0.800281 | 1.551454e-48 | -8.615850e-47 |
| Msa0222620 | Msa0643220 | 0.820089 | 8.247204e-53 | -8.615850e-47 |
| Msa0225180 | Msa0643220 | 0.804732 | 1.876057e-49 | -8.615850e-47 |
| Msa0225740 | Msa0643220 | 0.847404 | 1.181910e-59 | -8.615850e-47 |
| Msa0226470 | Msa0643220 | 0.805576 | 1.248600e-49 | -8.615850e-47 |
| Msa0227400 | Msa0643220 | 0.837122 | 6.260174e-57 | -8.615850e-47 |
| Msa0231650 | Msa0643220 | 0.837861 | 4.047798e-57 | -8.615850e-47 |
| Msa0366240 | Msa0643220 | 0.804763 | 1.848208e-49 | -8.615850e-47 |
| Msa0372660 | Msa0643220 | 0.832880 | 7.341270e-56 | -8.615850e-47 |
| Msa0372670 | Msa0643220 | 0.838975 | 2.089224e-57 | -8.615850e-47 |
| Msa0385580 | Msa0643220 | 0.857556 | 1.505895e-62 | -8.615850e-47 |
| Msa0395870 | Msa0643220 | 0.805616 | 1.224824e-49 | -8.615850e-47 |
| Msa0402330 | Msa0643220 | 0.805909 | 1.062899e-49 | -8.615850e-47 |
| Msa0402650 | Msa0643220 | 0.812385 | 4.353646e-51 | -8.615850e-47 |
| Msa0410500 | Msa0643220 | 0.815857 | 7.458277e-52 | -8.615850e-47 |
| Msa0410650 | Msa0643220 | 0.807792 | 4.252091e-50 | -8.615850e-47 |
| Msa0417270 | Msa0643220 | 0.806788 | 6.938222e-50 | -8.615850e-47 |
| Msa0417880 | Msa0643220 | 0.803574 | 3.266851e-49 | -8.615850e-47 |
| Msa0419820 | Msa0643220 | 0.815914 | 7.240326e-52 | -8.615850e-47 |
| Msa0422840 | Msa0643220 | 0.810997 | 8.725855e-51 | -8.615850e-47 |
| Msa0422920 | Msa0643220 | 0.801401 | 9.162222e-49 | -8.615850e-47 |
| Msa0425400 | Msa0643220 | 0.800977 | 1.118922e-48 | -8.615850e-47 |
| Msa0432770 | Msa0643220 | 0.806847 | 6.741367e-50 | -8.615850e-47 |
| Msa0433640 | Msa0643220 | 0.802235 | 6.175908e-49 | -8.615850e-47 |
| Msa0442670 | Msa0643220 | 0.817565 | 3.087138e-52 | -8.615850e-47 |
| Msa0474950 | Msa0643220 | 0.809094 | 2.241859e-50 | -8.615850e-47 |
| Msa0475790 | Msa0643220 | 0.800502 | 1.398375e-48 | -8.615850e-47 |
| Msa0479170 | Msa0643220 | 0.816440 | 5.523097e-52 | -8.615850e-47 |
| Msa0480000 | Msa0643220 | 0.811009 | 8.672073e-51 | -8.615850e-47 |
| Msa0481530 | Msa0643220 | 0.821709 | 3.494607e-53 | -8.615850e-47 |
| Msa0242230 | Msa0643220 | 0.800937 | 1.140095e-48 | -8.615850e-47 |
| Msa0243100 | Msa0643220 | 0.814183 | 1.753919e-51 | -8.615850e-47 |
| Msa0244780 | Msa0643220 | 0.815487 | 9.015407e-52 | -8.615850e-47 |
| Msa0244860 | Msa0643220 | 0.818637 | 1.767093e-52 | -8.615850e-47 |
| Msa0260210 | Msa0643220 | 0.804115 | 2.522188e-49 | -8.615850e-47 |
| Msa0262310 | Msa0643220 | 0.814300 | 1.652594e-51 | -8.615850e-47 |
| Msa0262340 | Msa0643220 | 0.802190 | 6.311240e-49 | -8.615850e-47 |
| Msa0264570 | Msa0643220 | 0.805098 | 1.572705e-49 | -8.615850e-47 |
| Msa0264930 | Msa0643220 | 0.813993 | 1.931585e-51 | -8.615850e-47 |
| Msa0268130 | Msa0643220 | 0.830723 | 2.500397e-55 | -8.615850e-47 |
| Msa0271530 | Msa0643220 | 0.808427 | 3.113738e-50 | -8.615850e-47 |
| Msa0274360 | Msa0643220 | 0.810915 | 9.090691e-51 | -8.615850e-47 |
| Msa0279790 | Msa0643220 | 0.807005 | 6.243998e-50 | -8.615850e-47 |
| Msa0283450 | Msa0643220 | 0.804911 | 1.721105e-49 | -8.615850e-47 |
| Msa0283520 | Msa0643220 | 0.826620 | 2.454578e-54 | -8.615850e-47 |
| Msa0287650 | Msa0643220 | 0.824706 | 6.978843e-54 | -8.615850e-47 |
| Msa0298990 | Msa0643220 | 0.829239 | 5.752199e-55 | -8.615850e-47 |
| Msa0299870 | Msa0643220 | 0.800626 | 1.319610e-48 | -8.615850e-47 |
| Msa0300120 | Msa0643220 | 0.821905 | 3.148279e-53 | -8.615850e-47 |
| Msa0302980 | Msa0643220 | 0.808239 | 3.414582e-50 | -8.615850e-47 |
| Msa0304290 | Msa0643220 | 0.802568 | 5.274175e-49 | -8.615850e-47 |
| Msa0304330 | Msa0643220 | 0.805782 | 1.130268e-49 | -8.615850e-47 |
| Msa0309750 | Msa0643220 | 0.814581 | 1.432432e-51 | -8.615850e-47 |
| Msa0309770 | Msa0643220 | 0.831479 | 1.631354e-55 | -8.615850e-47 |
| Msa0311860 | Msa0643220 | 0.807673 | 4.505123e-50 | -8.615850e-47 |
| Msa0314210 | Msa0643220 | 0.802036 | 6.787238e-49 | -8.615850e-47 |
| Msa0332000 | Msa0643220 | 0.820422 | 6.917262e-53 | -8.615850e-47 |
| Msa0337620 | Msa0643220 | 0.812112 | 4.995315e-51 | -8.615850e-47 |
| Msa0337650 | Msa0643220 | 0.804515 | 2.081815e-49 | -8.615850e-47 |
| Msa0342360 | Msa0643220 | 0.828195 | 1.029022e-54 | -8.615850e-47 |
| Msa0355270 | Msa0643220 | 0.803455 | 3.458508e-49 | -8.615850e-47 |
| Msa0364000 | Msa0643220 | 0.822976 | 1.775891e-53 | -8.615850e-47 |
| Msa0484780 | Msa0643220 | 0.829835 | 4.120301e-55 | -8.615850e-47 |
| Msa0488400 | Msa0643220 | 0.807876 | 4.079450e-50 | -8.615850e-47 |
| Msa0505770 | Msa0643220 | 0.808570 | 2.901890e-50 | -8.615850e-47 |
| Msa0507680 | Msa0643220 | 0.809312 | 2.013202e-50 | -8.615850e-47 |
| Msa0509390 | Msa0643220 | 0.803581 | 3.256469e-49 | -8.615850e-47 |
| Msa0509610 | Msa0643220 | 0.833451 | 5.292826e-56 | -8.615850e-47 |
| Msa0521540 | Msa0643220 | 0.804199 | 2.423082e-49 | -8.615850e-47 |
| Msa0526890 | Msa0643220 | 0.812864 | 3.421598e-51 | -8.615850e-47 |
| Msa0529890 | Msa0643220 | 0.810929 | 9.027907e-51 | -8.615850e-47 |
| Msa0534590 | Msa0643220 | 0.805521 | 1.282434e-49 | -8.615850e-47 |
| Msa0541860 | Msa0643220 | 0.845163 | 4.819760e-59 | -8.615850e-47 |
| Msa0546360 | Msa0643220 | 0.803910 | 2.781956e-49 | -8.615850e-47 |
| Msa0547360 | Msa0643220 | 0.957896 | 8.930022e-116 | -8.615850e-47 |
| Msa0547720 | Msa0643220 | 0.815686 | 8.140122e-52 | -8.615850e-47 |
| Msa0552810 | Msa0643220 | 0.814107 | 1.823496e-51 | -8.615850e-47 |
| Msa0557070 | Msa0643220 | 0.819487 | 1.132144e-52 | -8.615850e-47 |
| Msa0568820 | Msa0643220 | 0.803566 | 3.279271e-49 | -8.615850e-47 |
| Msa0577500 | Msa0643220 | 0.827446 | 1.557911e-54 | -8.615850e-47 |
| Msa0585560 | Msa0643220 | 0.821341 | 4.250973e-53 | -8.615850e-47 |
| Msa0590800 | Msa0643220 | 0.816917 | 4.319087e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643220 | MtrunA17_Chr4g0029311 | 92.593 | 189 | 4 | 2 | 1 | 189 | 1 | 179 | 1.74e-123 | 345 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643220 | AT1G07980.1 | 49.000 | 100 | 50 | 1 | 81 | 180 | 99 | 197 | 2.06e-27 | 103 |
| Msa0643220 | AT1G07980.2 | 40.541 | 74 | 43 | 1 | 81 | 154 | 99 | 171 | 2.06e-14 | 68.2 |
Find 54 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACTTTCTTCCTGTTCTT+TGG | 0.144244 | 4_3:-45744270 | None:intergenic |
| TTCGTTCTTTATCTTCTCTT+TGG | 0.213367 | 4_3:-45744186 | None:intergenic |
| TTCTTCCTGTTCTTTGGAAT+TGG | 0.238672 | 4_3:-45744264 | None:intergenic |
| TGTTTCCTATGAATCGAATT+AGG | 0.259220 | 4_3:+45744348 | Msa0643220:CDS |
| TCCTCGGCTTTCACTTTCTC+AGG | 0.351904 | 4_3:-45746785 | None:intergenic |
| ACAAACTCAAGAGGGAATAA+AGG | 0.360672 | 4_3:+45746821 | Msa0643220:CDS |
| TTTAAAGCTTCCATCTCATA+TGG | 0.365236 | 4_3:+45746989 | Msa0643220:three_prime_UTR |
| CAATTAGCGGAGGATGCTTA+TGG | 0.368797 | 4_3:+45744562 | Msa0643220:CDS |
| TGTTTCTCAGGAAGCAATCT+TGG | 0.399959 | 4_3:+45744403 | Msa0643220:CDS |
| TAGCGATTTGCGTGTTTCTC+AGG | 0.418237 | 4_3:+45744391 | Msa0643220:CDS |
| AAATCTGTCACATTCTGAAA+TGG | 0.428197 | 4_3:+45746897 | Msa0643220:three_prime_UTR |
| AAGAGGGAATAAAGGAGGTT+AGG | 0.433079 | 4_3:+45746829 | Msa0643220:CDS |
| AAACTCAGTGTAAGCTGAAA+GGG | 0.437263 | 4_3:+45744005 | Msa0643220:five_prime_UTR |
| TGCTTATGGTTGTTGTGCTC+AGG | 0.449173 | 4_3:+45744576 | Msa0643220:CDS |
| AAAAGATATGACTTTCTGTC+TGG | 0.459425 | 4_3:+45746635 | Msa0643220:CDS |
| CTTGTAGGTGTTGAGGTTTG+TGG | 0.466318 | 4_3:-45744128 | None:intergenic |
| AAATTCCAATTCCAAAGAAC+AGG | 0.466460 | 4_3:+45744259 | Msa0643220:CDS |
| GTGCAACGGTAAATACACTA+TGG | 0.467964 | 4_3:-45746961 | None:intergenic |
| TAGCTGAAGGTAAATTTCCC+AGG | 0.480965 | 4_3:+45747110 | Msa0643220:three_prime_UTR |
| TGTCTCTCTTAATGCATCCT+CGG | 0.488436 | 4_3:-45746801 | None:intergenic |
| CGGTGTTTCTGACACAATGA+AGG | 0.489095 | 4_3:-45743972 | None:intergenic |
| TCGAATTAGGACGATGTTGA+AGG | 0.492300 | 4_3:+45744361 | Msa0643220:CDS |
| ATCGTCCTAATTCGATTCAT+AGG | 0.501138 | 4_3:-45744353 | None:intergenic |
| GACAGATTTAACAAAAGAAT+AGG | 0.507997 | 4_3:-45746883 | None:intergenic |
| ATGGTTGTTGTGCTCAGGAT+CGG | 0.518192 | 4_3:+45744581 | Msa0643220:CDS |
| TTTGGAATTGGAATTTCCGT+TGG | 0.525440 | 4_3:-45744252 | None:intergenic |
| TTCTGCAATGGAGTTGTTTG+AGG | 0.526556 | 4_3:-45744081 | None:intergenic |
| CATTGTTTCCACCCTGTCGT+TGG | 0.535443 | 4_3:-45747167 | None:intergenic |
| TAAACTCAGTGTAAGCTGAA+AGG | 0.541822 | 4_3:+45744004 | Msa0643220:five_prime_UTR |
| TCCAAAGAACAGGAAGAAAG+TGG | 0.544342 | 4_3:+45744269 | Msa0643220:CDS |
| CACTGAGTTTACTACTCTCA+CGG | 0.545080 | 4_3:-45743992 | None:intergenic |
| AGTTGCTAAATACCAACGAC+AGG | 0.545923 | 4_3:+45747155 | Msa0643220:three_prime_UTR |
| GGAAATGTAAAACAAAATAG+TGG | 0.550060 | 4_3:+45746850 | Msa0643220:exon |
| GAAGTTTCTCGAACAATTAG+CGG | 0.558467 | 4_3:+45744549 | Msa0643220:CDS |
| TTTAACAAAAGAATAGGCTA+AGG | 0.561110 | 4_3:-45746877 | None:intergenic |
| TTGATGCTTGACATTTGTAA+CGG | 0.572008 | 4_3:+45747047 | Msa0643220:three_prime_UTR |
| CGAATTAGGACGATGTTGAA+GGG | 0.589179 | 4_3:+45744362 | Msa0643220:CDS |
| AAATTTCGTGGCATAGCTGA+AGG | 0.598046 | 4_3:+45747097 | Msa0643220:three_prime_UTR |
| TGAAATGGAAACGTGTATGA+TGG | 0.599020 | 4_3:+45746912 | Msa0643220:three_prime_UTR |
| AGCTGAAGGTAAATTTCCCA+GGG | 0.606570 | 4_3:+45747111 | Msa0643220:three_prime_UTR |
| GGTGTTTCTGACACAATGAA+GGG | 0.610475 | 4_3:-45743971 | None:intergenic |
| TAAGAGAGACAAACTCAAGA+GGG | 0.613384 | 4_3:+45746813 | Msa0643220:CDS |
| AAGAAACTCAATTTCACCAA+CGG | 0.626812 | 4_3:+45744236 | Msa0643220:CDS |
| AACTCAAGAGGGAATAAAGG+AGG | 0.639462 | 4_3:+45746824 | Msa0643220:CDS |
| TTAAGAGAGACAAACTCAAG+AGG | 0.641585 | 4_3:+45746812 | Msa0643220:CDS |
| CTTGGCTATTAACAATGCTG+CGG | 0.645511 | 4_3:+45744421 | Msa0643220:CDS |
| GTTTCTCGAACAATTAGCGG+AGG | 0.647450 | 4_3:+45744552 | Msa0643220:CDS |
| AAGAAGAAAGAAACATGCAA+AGG | 0.664587 | 4_3:+45744292 | Msa0643220:CDS |
| AGCTTTAAAGAAGAGTGCAA+CGG | 0.672288 | 4_3:-45746975 | None:intergenic |
| TTATCAAAATACAATCACAA+TGG | 0.679852 | 4_3:+45744055 | Msa0643220:exon |
| GCTAAATACCAACGACAGGG+TGG | 0.680625 | 4_3:+45747159 | Msa0643220:three_prime_UTR |
| TCCTGAGAAAGTGAAAGCCG+AGG | 0.694332 | 4_3:+45746784 | Msa0643220:CDS |
| GTTGCTAAATACCAACGACA+GGG | 0.704192 | 4_3:+45747156 | Msa0643220:three_prime_UTR |
| GCTGAAGGTAAATTTCCCAG+GGG | 0.789466 | 4_3:+45747112 | Msa0643220:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTGTTATGGTTTTTAT+TGG | + | chr4_3:45744483-45744502 | Msa0643220:intron | 15.0% |
| !! | AATTAACCAATTATTAAGTT+AGG | + | chr4_3:45745979-45745998 | Msa0643220:intron | 15.0% |
| !! | ATTAACCAATTATTAAGTTA+GGG | + | chr4_3:45745980-45745999 | Msa0643220:intron | 15.0% |
| !! | TTTATTTACCACTAATTAAA+AGG | + | chr4_3:45746727-45746746 | Msa0643220:intron | 15.0% |
| !! | TTATTTACCACTAATTAAAA+GGG | + | chr4_3:45746728-45746747 | Msa0643220:intron | 15.0% |
| !! | TTATCAAAATACAATCACAA+TGG | + | chr4_3:45744055-45744074 | Msa0643220:exon | 20.0% |
| !!! | ATTGTTATGTGTTTTTGATT+TGG | + | chr4_3:45744508-45744527 | Msa0643220:intron | 20.0% |
| !! | GTTGCGTTTAAATTATTATT+CGG | + | chr4_3:45744735-45744754 | Msa0643220:intron | 20.0% |
| !! | TTAGAGAACTTATGAAAATA+AGG | + | chr4_3:45744963-45744982 | Msa0643220:intron | 20.0% |
| !! | TATGAAAATAAGGTGAAAAA+AGG | + | chr4_3:45744973-45744992 | Msa0643220:intron | 20.0% |
| !!! | TTTAGATTTTGCAATCTATT+AGG | + | chr4_3:45745153-45745172 | Msa0643220:intron | 20.0% |
| !!! | CTATTAACTAGATTTGATTT+GGG | - | chr4_3:45745597-45745616 | None:intergenic | 20.0% |
| !! | ACTATTAACTAGATTTGATT+TGG | - | chr4_3:45745598-45745617 | None:intergenic | 20.0% |
| !! | CATTATCATGAATAAAAAAC+TGG | + | chr4_3:45746212-45746231 | Msa0643220:intron | 20.0% |
| !! | ATTAATCTAACCCATTAATT+AGG | + | chr4_3:45746255-45746274 | Msa0643220:intron | 20.0% |
| !!! | AACCTTTTTTGTTTTCTTTA+TGG | + | chr4_3:45746388-45746407 | Msa0643220:intron | 20.0% |
| !!! | TTTTATCAGTAATTAGGAAA+AGG | - | chr4_3:45746576-45746595 | None:intergenic | 20.0% |
| !! | TGGTAAATAAATACATGTAA+AGG | - | chr4_3:45746718-45746737 | None:intergenic | 20.0% |
| ! | ATGTGTTAATGTCAAATGTT+TGG | + | chr4_3:45744799-45744818 | Msa0643220:intron | 25.0% |
| ! | TGTGTTAATGTCAAATGTTT+GGG | + | chr4_3:45744800-45744819 | Msa0643220:intron | 25.0% |
| !! | CTAATATAACTTGTAAGAAC+AGG | - | chr4_3:45744947-45744966 | None:intergenic | 25.0% |
| ! | TCTATATTCTTGGAACTTAA+GGG | + | chr4_3:45745095-45745114 | Msa0643220:intron | 25.0% |
| !! | TTTTCTTTGTTGGGAAATAT+TGG | + | chr4_3:45745122-45745141 | Msa0643220:intron | 25.0% |
| ! | TACAAATTAATATGTGACAG+TGG | + | chr4_3:45745242-45745261 | Msa0643220:intron | 25.0% |
| !!! | AGTTATTTGTGGTTACTTTT+CGG | + | chr4_3:45745460-45745479 | Msa0643220:intron | 25.0% |
| !! | TTTTGTAACATTCTTATGCA+GGG | - | chr4_3:45745653-45745672 | None:intergenic | 25.0% |
| !! | ATTTTGTAACATTCTTATGC+AGG | - | chr4_3:45745654-45745673 | None:intergenic | 25.0% |
| ! | AACTATTCAGAAGTGAATAT+AGG | - | chr4_3:45745887-45745906 | None:intergenic | 25.0% |
| ! | ATTCATGTGAATCAGAATAT+AGG | - | chr4_3:45745956-45745975 | None:intergenic | 25.0% |
| ! | TTCAACCCTAACTTAATAAT+TGG | - | chr4_3:45745988-45746007 | None:intergenic | 25.0% |
| ! | ATTATTAAGTTAGGGTTGAA+TGG | + | chr4_3:45745988-45746007 | Msa0643220:intron | 25.0% |
| ! | GACCATAAAGAAAACAAAAA+AGG | - | chr4_3:45746393-45746412 | None:intergenic | 25.0% |
| !! | TCAAATATTAAGTCTTGTGT+TGG | - | chr4_3:45746449-45746468 | None:intergenic | 25.0% |
| !!! | CAGTTGTTTTATCAGTAATT+AGG | - | chr4_3:45746582-45746601 | None:intergenic | 25.0% |
| ! | GGAAATGTAAAACAAAATAG+TGG | + | chr4_3:45746850-45746869 | Msa0643220:exon | 25.0% |
| ! | TTTAACAAAAGAATAGGCTA+AGG | - | chr4_3:45746880-45746899 | None:intergenic | 25.0% |
| ! | GACAGATTTAACAAAAGAAT+AGG | - | chr4_3:45746886-45746905 | None:intergenic | 25.0% |
| !!! | AGATTTTTTTTTTCTTGCTG+TGG | + | chr4_3:45747014-45747033 | Msa0643220:three_prime_UTR | 25.0% |
| !! | TTTTTATGCTGAAAATTTCG+TGG | + | chr4_3:45747085-45747104 | Msa0643220:three_prime_UTR | 25.0% |
| ! | TCTTTCTTGATTTTGCTTGT+AGG | - | chr4_3:45744146-45744165 | None:intergenic | 30.0% |
| TTCGTTCTTTATCTTCTCTT+TGG | - | chr4_3:45744189-45744208 | None:intergenic | 30.0% | |
| AAGAAACTCAATTTCACCAA+CGG | + | chr4_3:45744236-45744255 | Msa0643220:CDS | 30.0% | |
| AAATTCCAATTCCAAAGAAC+AGG | + | chr4_3:45744259-45744278 | Msa0643220:CDS | 30.0% | |
| AAGAAGAAAGAAACATGCAA+AGG | + | chr4_3:45744292-45744311 | Msa0643220:CDS | 30.0% | |
| TGTTTCCTATGAATCGAATT+AGG | + | chr4_3:45744348-45744367 | Msa0643220:CDS | 30.0% | |
| !!! | ATTTGGTGTTTGTGTTTTGT+AGG | + | chr4_3:45744525-45744544 | Msa0643220:intron | 30.0% |
| TAATTTAAACGCAACCACAT+CGG | - | chr4_3:45744730-45744749 | None:intergenic | 30.0% | |
| !! | ATAAGCTAGTTCTATAGCAA+AGG | + | chr4_3:45744884-45744903 | Msa0643220:intron | 30.0% |
| TTTCATAAGTTCTCCCAAAT+AGG | + | chr4_3:45745019-45745038 | Msa0643220:intron | 30.0% | |
| !! | TAAGTTTTGTGAGCCTATTT+GGG | - | chr4_3:45745035-45745054 | None:intergenic | 30.0% |
| !! | ATAAGTTTTGTGAGCCTATT+TGG | - | chr4_3:45745036-45745055 | None:intergenic | 30.0% |
| GTCTATATTCTTGGAACTTA+AGG | + | chr4_3:45745094-45745113 | Msa0643220:intron | 30.0% | |
| ! | TTTGTTGGGAAATATTGGTT+TGG | + | chr4_3:45745127-45745146 | Msa0643220:intron | 30.0% |
| GGTCAAAAACAATAAACAGA+CGG | - | chr4_3:45745302-45745321 | None:intergenic | 30.0% | |
| GTAGAAGTCTTAGTTATTTG+TGG | + | chr4_3:45745449-45745468 | Msa0643220:intron | 30.0% | |
| !!! | GTTATTTGTGGTTACTTTTC+GGG | + | chr4_3:45745461-45745480 | Msa0643220:intron | 30.0% |
| !!! | TTATTTGTGGTTACTTTTCG+GGG | + | chr4_3:45745462-45745481 | Msa0643220:intron | 30.0% |
| !!! | ATATCATACTGGTTTTGTTC+TGG | + | chr4_3:45745542-45745561 | Msa0643220:intron | 30.0% |
| ACTGATAGGCTTAATATGAT+TGG | - | chr4_3:45745685-45745704 | None:intergenic | 30.0% | |
| ATATTAAGCCTATCAGTTCA+TGG | + | chr4_3:45745688-45745707 | Msa0643220:intron | 30.0% | |
| TATTAAGCCTATCAGTTCAT+GGG | + | chr4_3:45745689-45745708 | Msa0643220:intron | 30.0% | |
| CGATTCAGTTCATATCATAT+AGG | + | chr4_3:45745772-45745791 | Msa0643220:intron | 30.0% | |
| TCAGAAGTGAATATAGGAAA+CGG | - | chr4_3:45745881-45745900 | None:intergenic | 30.0% | |
| GGTGATATTTATAAGTGGAT+GGG | - | chr4_3:45745915-45745934 | None:intergenic | 30.0% | |
| TGGTGATATTTATAAGTGGA+TGG | - | chr4_3:45745916-45745935 | None:intergenic | 30.0% | |
| GTAGTGGTGATATTTATAAG+TGG | - | chr4_3:45745920-45745939 | None:intergenic | 30.0% | |
| !! | AGGTTTCTAGAATAAAGTAG+TGG | - | chr4_3:45745936-45745955 | None:intergenic | 30.0% |
| GATAGAGATTTCCTTCAATA+TGG | - | chr4_3:45746193-45746212 | None:intergenic | 30.0% | |
| ATTTGACCTATGCTATAAGT+AGG | + | chr4_3:45746463-45746482 | Msa0643220:intron | 30.0% | |
| TTACAACCTACTTATAGCAT+AGG | - | chr4_3:45746472-45746491 | None:intergenic | 30.0% | |
| CACATAAATAAACATGCACA+AGG | - | chr4_3:45746536-45746555 | None:intergenic | 30.0% | |
| AAAAGATATGACTTTCTGTC+TGG | + | chr4_3:45746635-45746654 | Msa0643220:CDS | 30.0% | |
| CACTAGATTAAGTTTCAACA+GGG | - | chr4_3:45746672-45746691 | None:intergenic | 30.0% | |
| TCACTAGATTAAGTTTCAAC+AGG | - | chr4_3:45746673-45746692 | None:intergenic | 30.0% | |
| ! | AAATCTGTCACATTCTGAAA+TGG | + | chr4_3:45746897-45746916 | Msa0643220:three_prime_UTR | 30.0% |
| ! | TTTAAAGCTTCCATCTCATA+TGG | + | chr4_3:45746989-45747008 | Msa0643220:three_prime_UTR | 30.0% |
| AAAAATCTAGCCATATGAGA+TGG | - | chr4_3:45747002-45747021 | None:intergenic | 30.0% | |
| TTGATGCTTGACATTTGTAA+CGG | + | chr4_3:45747047-45747066 | Msa0643220:three_prime_UTR | 30.0% | |
| TAAACTCAGTGTAAGCTGAA+AGG | + | chr4_3:45744004-45744023 | Msa0643220:five_prime_UTR | 35.0% | |
| AAACTCAGTGTAAGCTGAAA+GGG | + | chr4_3:45744005-45744024 | Msa0643220:five_prime_UTR | 35.0% | |
| !!! | CTTCTTGTTGTTTTCTGCAA+TGG | - | chr4_3:45744096-45744115 | None:intergenic | 35.0% |
| ! | TTTGGAATTGGAATTTCCGT+TGG | - | chr4_3:45744255-45744274 | None:intergenic | 35.0% |
| !! | TTCTTCCTGTTCTTTGGAAT+TGG | - | chr4_3:45744267-45744286 | None:intergenic | 35.0% |
| ATCGTCCTAATTCGATTCAT+AGG | - | chr4_3:45744356-45744375 | None:intergenic | 35.0% | |
| GAAGTTTCTCGAACAATTAG+CGG | + | chr4_3:45744549-45744568 | Msa0643220:CDS | 35.0% | |
| AGCTGTTACATTTGTACTTG+CGG | + | chr4_3:45744667-45744686 | Msa0643220:intron | 35.0% | |
| AACCACTTCTAGTAGCTTAT+CGG | + | chr4_3:45744771-45744790 | Msa0643220:intron | 35.0% | |
| ATATAGACGCTTGTTTGGAT+TGG | - | chr4_3:45745082-45745101 | None:intergenic | 35.0% | |
| CAAGAATATAGACGCTTGTT+TGG | - | chr4_3:45745087-45745106 | None:intergenic | 35.0% | |
| CAAACAAGCGTCTATATTCT+TGG | + | chr4_3:45745085-45745104 | Msa0643220:intron | 35.0% | |
| ! | TAAGGGATGCTTTTCTTTGT+TGG | + | chr4_3:45745112-45745131 | Msa0643220:intron | 35.0% |
| ! | AAGGGATGCTTTTCTTTGTT+GGG | + | chr4_3:45745113-45745132 | Msa0643220:intron | 35.0% |
| !! | TTACTTTTCGGGGAGAATAA+CGG | + | chr4_3:45745472-45745491 | Msa0643220:intron | 35.0% |
| ! | TTGAAAGAGCTTTTGCCTTT+AGG | + | chr4_3:45745512-45745531 | Msa0643220:intron | 35.0% |
| ! | TGAAAGAGCTTTTGCCTTTA+GGG | + | chr4_3:45745513-45745532 | Msa0643220:intron | 35.0% |
| TATGATATTCCCTACCCTAA+AGG | - | chr4_3:45745530-45745549 | None:intergenic | 35.0% | |
| ATTAAGCCTATCAGTTCATG+GGG | + | chr4_3:45745690-45745709 | Msa0643220:intron | 35.0% | |
| TATAGGAAACGGTTCAAGAA+GGG | - | chr4_3:45745870-45745889 | None:intergenic | 35.0% | |
| ATATAGGAAACGGTTCAAGA+AGG | - | chr4_3:45745871-45745890 | None:intergenic | 35.0% | |
| ACTTCCAGTGCCTAATTAAT+GGG | - | chr4_3:45746268-45746287 | None:intergenic | 35.0% | |
| AACTTCCAGTGCCTAATTAA+TGG | - | chr4_3:45746269-45746288 | None:intergenic | 35.0% | |
| TATCAATAAGAGCAAAAGCG+AGG | + | chr4_3:45746340-45746359 | Msa0643220:intron | 35.0% | |
| ! | TTTTCTTTATGGTCTGCACT+TGG | + | chr4_3:45746399-45746418 | Msa0643220:intron | 35.0% |
| !! | CTGTTACTTTGTATGTCCAT+TGG | + | chr4_3:45746497-45746516 | Msa0643220:intron | 35.0% |
| CTTTGTATGTCCATTGGAAT+TGG | + | chr4_3:45746503-45746522 | Msa0643220:intron | 35.0% | |
| AGGATCAATTCCAATTCCAA+TGG | - | chr4_3:45746516-45746535 | None:intergenic | 35.0% | |
| !! | GCAGAAACCCTTTTAATTAG+TGG | - | chr4_3:45746738-45746757 | None:intergenic | 35.0% |
| ACTTTCTCAGGAACAAAATC+TGG | - | chr4_3:45746776-45746795 | None:intergenic | 35.0% | |
| TTAAGAGAGACAAACTCAAG+AGG | + | chr4_3:45746812-45746831 | Msa0643220:CDS | 35.0% | |
| TAAGAGAGACAAACTCAAGA+GGG | + | chr4_3:45746813-45746832 | Msa0643220:CDS | 35.0% | |
| ACAAACTCAAGAGGGAATAA+AGG | + | chr4_3:45746821-45746840 | Msa0643220:CDS | 35.0% | |
| TGAAATGGAAACGTGTATGA+TGG | + | chr4_3:45746912-45746931 | Msa0643220:three_prime_UTR | 35.0% | |
| !! | AGCTTTAAAGAAGAGTGCAA+CGG | - | chr4_3:45746978-45746997 | None:intergenic | 35.0% |
| ! | TATGTTTTCTATCTTCCCCT+GGG | - | chr4_3:45747130-45747149 | None:intergenic | 35.0% |
| ! | ATATGTTTTCTATCTTCCCC+TGG | - | chr4_3:45747131-45747150 | None:intergenic | 35.0% |
| ! | GGTGTTTCTGACACAATGAA+GGG | - | chr4_3:45743974-45743993 | None:intergenic | 40.0% |
| CACTGAGTTTACTACTCTCA+CGG | - | chr4_3:45743995-45744014 | None:intergenic | 40.0% | |
| TTCTGCAATGGAGTTGTTTG+AGG | - | chr4_3:45744084-45744103 | None:intergenic | 40.0% | |
| ! | TGTTGAGGTTTGTGGCTTTT+TGG | - | chr4_3:45744123-45744142 | None:intergenic | 40.0% |
| !! | GATTTTGCTTGTAGGTGTTG+AGG | - | chr4_3:45744138-45744157 | None:intergenic | 40.0% |
| TCCAAAGAACAGGAAGAAAG+TGG | + | chr4_3:45744269-45744288 | Msa0643220:CDS | 40.0% | |
| TCCACTTTCTTCCTGTTCTT+TGG | - | chr4_3:45744273-45744292 | None:intergenic | 40.0% | |
| TCGAATTAGGACGATGTTGA+AGG | + | chr4_3:45744361-45744380 | Msa0643220:CDS | 40.0% | |
| CGAATTAGGACGATGTTGAA+GGG | + | chr4_3:45744362-45744381 | Msa0643220:CDS | 40.0% | |
| TGTTTCTCAGGAAGCAATCT+TGG | + | chr4_3:45744403-45744422 | Msa0643220:CDS | 40.0% | |
| CTTGGCTATTAACAATGCTG+CGG | + | chr4_3:45744421-45744440 | Msa0643220:CDS | 40.0% | |
| !! | GTCAAATGTTTGGGCTAGTT+TGG | + | chr4_3:45744809-45744828 | Msa0643220:intron | 40.0% |
| ! | ACCATTTGCTACCTTGTGAT+TGG | + | chr4_3:45745319-45745338 | Msa0643220:intron | 40.0% |
| ACCAATCACAAGGTAGCAAA+TGG | - | chr4_3:45745323-45745342 | None:intergenic | 40.0% | |
| GCACGAAAACACAACAAAAC+TGG | - | chr4_3:45745352-45745371 | None:intergenic | 40.0% | |
| TAGGGTAGGGAATATCATAC+TGG | + | chr4_3:45745531-45745550 | Msa0643220:intron | 40.0% | |
| GGTTGAATGGTTCAGAGATA+TGG | + | chr4_3:45746001-45746020 | Msa0643220:intron | 40.0% | |
| TCAGTGCTGTACACTAGAAA+AGG | + | chr4_3:45746043-45746062 | Msa0643220:intron | 40.0% | |
| CAGTGCTGTACACTAGAAAA+GGG | + | chr4_3:45746044-45746063 | Msa0643220:intron | 40.0% | |
| ATATGGCACAGGAAAAGAGA+AGG | - | chr4_3:45746176-45746195 | None:intergenic | 40.0% | |
| ! | CTTTTCCTGTGCCATATTGA+AGG | + | chr4_3:45746179-45746198 | Msa0643220:intron | 40.0% |
| GATTTCCTTCAATATGGCAC+AGG | - | chr4_3:45746187-45746206 | None:intergenic | 40.0% | |
| CTAACCCATTAATTAGGCAC+TGG | + | chr4_3:45746261-45746280 | Msa0643220:intron | 40.0% | |
| AATAAGAGCAAAAGCGAGGA+GGG | + | chr4_3:45746344-45746363 | Msa0643220:intron | 40.0% | |
| TGTCTCTCTTAATGCATCCT+CGG | - | chr4_3:45746804-45746823 | None:intergenic | 40.0% | |
| AACTCAAGAGGGAATAAAGG+AGG | + | chr4_3:45746824-45746843 | Msa0643220:CDS | 40.0% | |
| AAGAGGGAATAAAGGAGGTT+AGG | + | chr4_3:45746829-45746848 | Msa0643220:CDS | 40.0% | |
| GTGCAACGGTAAATACACTA+TGG | - | chr4_3:45746964-45746983 | None:intergenic | 40.0% | |
| AAATTTCGTGGCATAGCTGA+AGG | + | chr4_3:45747097-45747116 | Msa0643220:three_prime_UTR | 40.0% | |
| TAGCTGAAGGTAAATTTCCC+AGG | + | chr4_3:45747110-45747129 | Msa0643220:three_prime_UTR | 40.0% | |
| AGCTGAAGGTAAATTTCCCA+GGG | + | chr4_3:45747111-45747130 | Msa0643220:three_prime_UTR | 40.0% | |
| AGTTGCTAAATACCAACGAC+AGG | + | chr4_3:45747155-45747174 | Msa0643220:three_prime_UTR | 40.0% | |
| GTTGCTAAATACCAACGACA+GGG | + | chr4_3:45747156-45747175 | Msa0643220:three_prime_UTR | 40.0% | |
| ! | CGGTGTTTCTGACACAATGA+AGG | - | chr4_3:45743975-45743994 | None:intergenic | 45.0% |
| !! | CTTGTAGGTGTTGAGGTTTG+TGG | - | chr4_3:45744131-45744150 | None:intergenic | 45.0% |
| TAGCGATTTGCGTGTTTCTC+AGG | + | chr4_3:45744391-45744410 | Msa0643220:CDS | 45.0% | |
| GTTTCTCGAACAATTAGCGG+AGG | + | chr4_3:45744552-45744571 | Msa0643220:CDS | 45.0% | |
| CAATTAGCGGAGGATGCTTA+TGG | + | chr4_3:45744562-45744581 | Msa0643220:CDS | 45.0% | |
| TGCTTATGGTTGTTGTGCTC+AGG | + | chr4_3:45744576-45744595 | Msa0643220:CDS | 45.0% | |
| ATGGTTGTTGTGCTCAGGAT+CGG | + | chr4_3:45744581-45744600 | Msa0643220:CDS | 45.0% | |
| TGCGGCTTGTGTTTAGTGTT+TGG | + | chr4_3:45744685-45744704 | Msa0643220:intron | 45.0% | |
| CACCGATAAGCTACTAGAAG+TGG | - | chr4_3:45744776-45744795 | None:intergenic | 45.0% | |
| CTGGTAAACGACCAATCACA+AGG | - | chr4_3:45745333-45745352 | None:intergenic | 45.0% | |
| !! | TTTCGGGGAGAATAACGGAT+AGG | + | chr4_3:45745477-45745496 | Msa0643220:intron | 45.0% |
| !!! | AGAGCTTTTGCCTTTAGGGT+AGG | + | chr4_3:45745517-45745536 | Msa0643220:intron | 45.0% |
| !!! | GAGCTTTTGCCTTTAGGGTA+GGG | + | chr4_3:45745518-45745537 | Msa0643220:intron | 45.0% |
| CTAAGTCCCCATGAACTGAT+AGG | - | chr4_3:45745699-45745718 | None:intergenic | 45.0% | |
| TCAGTTCATGGGGACTTAGA+AGG | + | chr4_3:45745700-45745719 | Msa0643220:intron | 45.0% | |
| GGCATGGATGATAAGACACA+AGG | + | chr4_3:45745721-45745740 | Msa0643220:intron | 45.0% | |
| TCCATGTGATGTGAAGTGTG+AGG | + | chr4_3:45745820-45745839 | Msa0643220:intron | 45.0% | |
| TCCTCACACTTCACATCACA+TGG | - | chr4_3:45745824-45745843 | None:intergenic | 45.0% | |
| ! | GGTTCAAGAAGGGAGGTATA+TGG | - | chr4_3:45745860-45745879 | None:intergenic | 45.0% |
| CAATAAGAGCAAAAGCGAGG+AGG | + | chr4_3:45746343-45746362 | Msa0643220:intron | 45.0% | |
| GCTGAAGGTAAATTTCCCAG+GGG | + | chr4_3:45747112-45747131 | Msa0643220:three_prime_UTR | 45.0% | |
| !!! | TTTTTTTTTTTTTATTGTTA+TGG | + | chr4_3:45744473-45744492 | Msa0643220:intron | 5.0% |
| AAACGCAACCACATCGGTGT+TGG | - | chr4_3:45744724-45744743 | None:intergenic | 50.0% | |
| !! | GGGGAGAATAACGGATAGGT+AGG | + | chr4_3:45745481-45745500 | Msa0643220:intron | 50.0% |
| TCATGGGGACTTAGAAGGCA+TGG | + | chr4_3:45745705-45745724 | Msa0643220:intron | 50.0% | |
| AGGAAACGGTTCAAGAAGGG+AGG | - | chr4_3:45745867-45745886 | None:intergenic | 50.0% | |
| TCCTGAGAAAGTGAAAGCCG+AGG | + | chr4_3:45746784-45746803 | Msa0643220:CDS | 50.0% | |
| TCCTCGGCTTTCACTTTCTC+AGG | - | chr4_3:45746788-45746807 | None:intergenic | 50.0% | |
| GTCAGTGTCCAACACCGATG+TGG | + | chr4_3:45744713-45744732 | Msa0643220:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 45743968 | 45747181 | 45743968 | ID=Msa0643220;Name=Msa0643220 |
| chr4_3 | mRNA | 45743968 | 45747181 | 45743968 | ID=Msa0643220-mRNA-1;Parent=Msa0643220;Name=Msa0643220-mRNA-1;_AED=0.06;_eAED=0.06;_QI=106|1|1|1|1|1|4|331|189 |
| chr4_3 | exon | 45743968 | 45744442 | 45743968 | ID=Msa0643220-mRNA-1:exon:10627;Parent=Msa0643220-mRNA-1 |
| chr4_3 | exon | 45744547 | 45744631 | 45744547 | ID=Msa0643220-mRNA-1:exon:10628;Parent=Msa0643220-mRNA-1 |
| chr4_3 | exon | 45746615 | 45746656 | 45746615 | ID=Msa0643220-mRNA-1:exon:10629;Parent=Msa0643220-mRNA-1 |
| chr4_3 | exon | 45746777 | 45747181 | 45746777 | ID=Msa0643220-mRNA-1:exon:10630;Parent=Msa0643220-mRNA-1 |
| chr4_3 | five_prime_UTR | 45743968 | 45744073 | 45743968 | ID=Msa0643220-mRNA-1:five_prime_utr;Parent=Msa0643220-mRNA-1 |
| chr4_3 | CDS | 45744074 | 45744442 | 45744074 | ID=Msa0643220-mRNA-1:cds;Parent=Msa0643220-mRNA-1 |
| chr4_3 | CDS | 45744547 | 45744631 | 45744547 | ID=Msa0643220-mRNA-1:cds;Parent=Msa0643220-mRNA-1 |
| chr4_3 | CDS | 45746615 | 45746656 | 45746615 | ID=Msa0643220-mRNA-1:cds;Parent=Msa0643220-mRNA-1 |
| chr4_3 | CDS | 45746777 | 45746850 | 45746777 | ID=Msa0643220-mRNA-1:cds;Parent=Msa0643220-mRNA-1 |
| chr4_3 | three_prime_UTR | 45746851 | 45747181 | 45746851 | ID=Msa0643220-mRNA-1:three_prime_utr;Parent=Msa0643220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
