Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0120050 | sp|P0DI40|CASP1_VIGUN | 79.082 | 196 | 37 | 2 | 1 | 196 | 1 | 192 | 1.19e-92 | 271 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0120050 | A0A072VV58 | 95.918 | 196 | 8 | 0 | 1 | 196 | 1 | 196 | 1.07e-116 | 338 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004580 | Msa0120050 | 0.826785 | 2.242389e-54 | -8.615850e-47 |
Msa0010150 | Msa0120050 | 0.820925 | 5.301579e-53 | -8.615850e-47 |
Msa0024280 | Msa0120050 | 0.902251 | 1.173689e-78 | -8.615850e-47 |
Msa0024290 | Msa0120050 | 0.802406 | 5.696542e-49 | -8.615850e-47 |
Msa0027860 | Msa0120050 | 0.812718 | 3.681893e-51 | -8.615850e-47 |
Msa0033120 | Msa0120050 | 0.804325 | 2.280656e-49 | -8.615850e-47 |
Msa0048950 | Msa0120050 | 0.824943 | 6.137191e-54 | -8.615850e-47 |
Msa0057870 | Msa0120050 | 0.831329 | 1.775389e-55 | -8.615850e-47 |
Msa0059880 | Msa0120050 | 0.858445 | 8.195849e-63 | -8.615850e-47 |
Msa0072030 | Msa0120050 | 0.827569 | 1.455359e-54 | -8.615850e-47 |
Msa0073270 | Msa0120050 | 0.806888 | 6.610566e-50 | -8.615850e-47 |
Msa0074620 | Msa0120050 | 0.800766 | 1.235378e-48 | -8.615850e-47 |
Msa0075560 | Msa0120050 | 0.820956 | 5.215664e-53 | -8.615850e-47 |
Msa0099890 | Msa0120050 | 0.801760 | 7.734618e-49 | -8.615850e-47 |
Msa0102930 | Msa0120050 | 0.826073 | 3.312642e-54 | -8.615850e-47 |
Msa0108350 | Msa0120050 | 0.801733 | 7.832214e-49 | -8.615850e-47 |
Msa0120050 | Msa0120070 | 0.846950 | 1.574253e-59 | -8.615850e-47 |
Msa0120050 | Msa0131460 | 0.830330 | 3.120054e-55 | -8.615850e-47 |
Msa0120050 | Msa0140270 | 0.837549 | 4.866972e-57 | -8.615850e-47 |
Msa0120050 | Msa0147670 | 0.840103 | 1.063645e-57 | -8.615850e-47 |
Msa0120050 | Msa0147680 | 0.803230 | 3.849099e-49 | -8.615850e-47 |
Msa0120050 | Msa0150910 | 0.865010 | 8.052111e-65 | -8.615850e-47 |
Msa0120050 | Msa0163340 | 0.924624 | 5.495388e-90 | -8.615850e-47 |
Msa0120050 | Msa0163370 | 0.819212 | 1.307317e-52 | -8.615850e-47 |
Msa0120050 | Msa0168010 | 0.802128 | 6.498183e-49 | -8.615850e-47 |
Msa0120050 | Msa0170990 | 0.803231 | 3.847838e-49 | -8.615850e-47 |
Msa0120050 | Msa0177260 | 0.819582 | 1.076608e-52 | -8.615850e-47 |
Msa0120050 | Msa0190670 | 0.817335 | 3.477775e-52 | -8.615850e-47 |
Msa0120050 | Msa0190890 | 0.818476 | 1.921924e-52 | -8.615850e-47 |
Msa0120050 | Msa0195580 | 0.800835 | 1.196026e-48 | -8.615850e-47 |
Msa0120050 | Msa0209060 | 0.808878 | 2.494477e-50 | -8.615850e-47 |
Msa0120050 | Msa0212550 | 0.800163 | 1.639316e-48 | -8.615850e-47 |
Msa0120050 | Msa0219210 | 0.826163 | 3.154145e-54 | -8.615850e-47 |
Msa0120050 | Msa0220090 | 0.809665 | 1.691444e-50 | -8.615850e-47 |
Msa0120050 | Msa0223880 | 0.809030 | 2.314113e-50 | -8.615850e-47 |
Msa0120050 | Msa0233210 | 0.800767 | 1.234680e-48 | -8.615850e-47 |
Msa0120050 | Msa0261400 | 0.818215 | 2.202297e-52 | -8.615850e-47 |
Msa0120050 | Msa0269720 | 0.821817 | 3.300238e-53 | -8.615850e-47 |
Msa0120050 | Msa0278480 | 0.800977 | 1.118884e-48 | -8.615850e-47 |
Msa0120050 | Msa0278940 | 0.810320 | 1.221981e-50 | -8.615850e-47 |
Msa0120050 | Msa0281190 | 0.808017 | 3.807295e-50 | -8.615850e-47 |
Msa0120050 | Msa0288540 | 0.808696 | 2.728724e-50 | -8.615850e-47 |
Msa0120050 | Msa0298270 | 0.828139 | 1.061636e-54 | -8.615850e-47 |
Msa0120050 | Msa0299030 | 0.815010 | 1.150566e-51 | -8.615850e-47 |
Msa0120050 | Msa0336070 | 0.810051 | 1.396712e-50 | -8.615850e-47 |
Msa0120050 | Msa0336630 | 0.820720 | 5.910036e-53 | -8.615850e-47 |
Msa0120050 | Msa0340650 | 0.814089 | 1.840040e-51 | -8.615850e-47 |
Msa0120050 | Msa0342660 | 0.801469 | 8.874084e-49 | -8.615850e-47 |
Msa0120050 | Msa0349930 | 0.816427 | 5.561944e-52 | -8.615850e-47 |
Msa0120050 | Msa0366510 | 0.810511 | 1.111690e-50 | -8.615850e-47 |
Msa0120050 | Msa0374130 | 0.830089 | 3.573181e-55 | -8.615850e-47 |
Msa0120050 | Msa0380680 | 0.833773 | 4.398166e-56 | -8.615850e-47 |
Msa0120050 | Msa0414480 | 0.841596 | 4.316906e-58 | -8.615850e-47 |
Msa0120050 | Msa0425950 | 0.812973 | 3.237986e-51 | -8.615850e-47 |
Msa0120050 | Msa0426030 | 0.817656 | 2.944111e-52 | -8.615850e-47 |
Msa0120050 | Msa0426170 | 0.813556 | 2.411551e-51 | -8.615850e-47 |
Msa0120050 | Msa0430460 | 0.800916 | 1.151543e-48 | -8.615850e-47 |
Msa0120050 | Msa0439000 | 0.819358 | 1.211428e-52 | -8.615850e-47 |
Msa0120050 | Msa0439360 | 0.815349 | 9.676097e-52 | -8.615850e-47 |
Msa0120050 | Msa0444200 | 0.809845 | 1.547284e-50 | -8.615850e-47 |
Msa0120050 | Msa0464310 | 0.804270 | 2.341558e-49 | -8.615850e-47 |
Msa0120050 | Msa0469550 | 0.808052 | 3.742287e-50 | -8.615850e-47 |
Msa0120050 | Msa0482790 | 0.800491 | 1.405617e-48 | -8.615850e-47 |
Msa0120050 | Msa0490060 | 0.801872 | 7.335007e-49 | -8.615850e-47 |
Msa0120050 | Msa0491760 | 0.818632 | 1.771222e-52 | -8.615850e-47 |
Msa0120050 | Msa0491770 | 0.831213 | 1.896572e-55 | -8.615850e-47 |
Msa0120050 | Msa0515260 | 0.803411 | 3.531173e-49 | -8.615850e-47 |
Msa0120050 | Msa0523720 | 0.818391 | 2.008574e-52 | -8.615850e-47 |
Msa0120050 | Msa0531030 | 0.806380 | 8.460552e-50 | -8.615850e-47 |
Msa0120050 | Msa0531080 | 0.801422 | 9.071503e-49 | -8.615850e-47 |
Msa0120050 | Msa0535570 | 0.842076 | 3.225274e-58 | -8.615850e-47 |
Msa0120050 | Msa0538440 | 0.808370 | 3.202226e-50 | -8.615850e-47 |
Msa0120050 | Msa0538450 | 0.811485 | 6.839474e-51 | -8.615850e-47 |
Msa0120050 | Msa0538520 | 0.812204 | 4.768945e-51 | -8.615850e-47 |
Msa0120050 | Msa0543740 | 0.835410 | 1.705708e-56 | -8.615850e-47 |
Msa0120050 | Msa0548970 | 0.800352 | 1.500747e-48 | -8.615850e-47 |
Msa0120050 | Msa0549170 | 0.808861 | 2.515521e-50 | -8.615850e-47 |
Msa0120050 | Msa0549920 | 0.833528 | 5.064274e-56 | -8.615850e-47 |
Msa0120050 | Msa0554660 | 0.804094 | 2.547920e-49 | -8.615850e-47 |
Msa0120050 | Msa0555920 | 0.803652 | 3.146790e-49 | -8.615850e-47 |
Msa0120050 | Msa0574320 | 0.807307 | 5.389262e-50 | -8.615850e-47 |
Msa0120050 | Msa0579530 | 0.830063 | 3.625337e-55 | -8.615850e-47 |
Msa0120050 | Msa0587870 | 0.800169 | 1.635182e-48 | -8.615850e-47 |
Msa0120050 | Msa0587920 | 0.810629 | 1.048347e-50 | -8.615850e-47 |
Msa0120050 | Msa0591490 | 0.834655 | 2.642951e-56 | -8.615850e-47 |
Msa0120050 | Msa0599600 | 0.839111 | 1.926050e-57 | -8.615850e-47 |
Msa0120050 | Msa0602050 | 0.826644 | 2.422195e-54 | -8.615850e-47 |
Msa0120050 | Msa0603950 | 0.829060 | 6.357375e-55 | -8.615850e-47 |
Msa0120050 | Msa0604200 | 0.818402 | 1.997280e-52 | -8.615850e-47 |
Msa0120050 | Msa0605400 | 0.811739 | 6.021622e-51 | -8.615850e-47 |
Msa0120050 | Msa0605470 | 0.857642 | 1.420062e-62 | -8.615850e-47 |
Msa0120050 | Msa0616300 | 0.819830 | 9.452253e-53 | -8.615850e-47 |
Msa0120050 | Msa0628140 | 0.810402 | 1.173628e-50 | -8.615850e-47 |
Msa0120050 | Msa0631700 | 0.824268 | 8.849657e-54 | -8.615850e-47 |
Msa0120050 | Msa0639410 | 0.801169 | 1.022176e-48 | -8.615850e-47 |
Msa0120050 | Msa0640290 | 0.807919 | 3.994581e-50 | -8.615850e-47 |
Msa0120050 | Msa0643190 | 0.806369 | 8.507332e-50 | -8.615850e-47 |
Msa0120050 | Msa0643840 | 0.846972 | 1.551828e-59 | -8.615850e-47 |
Msa0120050 | Msa0645060 | 0.801730 | 7.844695e-49 | -8.615850e-47 |
Msa0120050 | Msa0651820 | 0.803724 | 3.041343e-49 | -8.615850e-47 |
Msa0120050 | Msa0655430 | 0.813656 | 2.291495e-51 | -8.615850e-47 |
Msa0120050 | Msa0655800 | 0.811457 | 6.933472e-51 | -8.615850e-47 |
Msa0120050 | Msa0668220 | 0.803761 | 2.987561e-49 | -8.615850e-47 |
Msa0120050 | Msa0670360 | 0.831224 | 1.883978e-55 | -8.615850e-47 |
Msa0120050 | Msa0678620 | 0.840261 | 9.670089e-58 | -8.615850e-47 |
Msa0120050 | Msa0684720 | 0.821795 | 3.338108e-53 | -8.615850e-47 |
Msa0120050 | Msa0699230 | 0.803370 | 3.600653e-49 | -8.615850e-47 |
Msa0120050 | Msa0711260 | 0.821240 | 4.486190e-53 | -8.615850e-47 |
Msa0120050 | Msa0727480 | 0.857515 | 1.548839e-62 | -8.615850e-47 |
Msa0120050 | Msa0735130 | 0.808281 | 3.345176e-50 | -8.615850e-47 |
Msa0120050 | Msa0735140 | 0.806655 | 7.402802e-50 | -8.615850e-47 |
Msa0120050 | Msa0735280 | 0.829177 | 5.956707e-55 | -8.615850e-47 |
Msa0120050 | Msa0768670 | 0.888930 | 3.811064e-73 | -8.615850e-47 |
Msa0120050 | Msa0768720 | 0.872963 | 2.122416e-67 | -8.615850e-47 |
Msa0120050 | Msa0777070 | 0.808754 | 2.651141e-50 | -8.615850e-47 |
Msa0120050 | Msa0777250 | 0.844440 | 7.549099e-59 | -8.615850e-47 |
Msa0120050 | Msa0787860 | 0.802821 | 4.676654e-49 | -8.615850e-47 |
Msa0120050 | Msa0791300 | 0.817061 | 4.008286e-52 | -8.615850e-47 |
Msa0120050 | Msa0794240 | 0.808470 | 3.048723e-50 | -8.615850e-47 |
Msa0120050 | Msa0804170 | 0.810501 | 1.117309e-50 | -8.615850e-47 |
Msa0120050 | Msa0806930 | 0.831110 | 2.009374e-55 | -8.615850e-47 |
Msa0120050 | Msa0814160 | 0.847492 | 1.117548e-59 | -8.615850e-47 |
Msa0120050 | Msa0814230 | 0.849473 | 3.160921e-60 | -8.615850e-47 |
Msa0120050 | Msa0822410 | 0.803883 | 2.817793e-49 | -8.615850e-47 |
Msa0120050 | Msa0824860 | 0.804263 | 2.349571e-49 | -8.615850e-47 |
Msa0120050 | Msa0831890 | 0.823067 | 1.690967e-53 | -8.615850e-47 |
Msa0120050 | Msa0854840 | 0.821160 | 4.678776e-53 | -8.615850e-47 |
Msa0120050 | Msa0861730 | 0.840536 | 8.194828e-58 | -8.615850e-47 |
Msa0120050 | Msa0863840 | 0.812412 | 4.295346e-51 | -8.615850e-47 |
Msa0120050 | Msa0863850 | 0.803878 | 2.825399e-49 | -8.615850e-47 |
Msa0120050 | Msa0864160 | 0.804608 | 1.990879e-49 | -8.615850e-47 |
Msa0120050 | Msa0883640 | 0.846562 | 2.009492e-59 | -8.615850e-47 |
Msa0120050 | Msa0893840 | 0.835900 | 1.281983e-56 | -8.615850e-47 |
Msa0120050 | Msa0895420 | 0.835704 | 1.437025e-56 | -8.615850e-47 |
Msa0120050 | Msa0896910 | 0.812476 | 4.158239e-51 | -8.615850e-47 |
Msa0120050 | Msa0896920 | 0.841960 | 3.459481e-58 | -8.615850e-47 |
Msa0120050 | Msa0896950 | 0.820201 | 7.772085e-53 | -8.615850e-47 |
Msa0120050 | Msa0902340 | 0.800516 | 1.389133e-48 | -8.615850e-47 |
Msa0120050 | Msa0910830 | 0.840766 | 7.135471e-58 | -8.615850e-47 |
Msa0120050 | Msa0913550 | 0.855255 | 7.130478e-62 | -8.615850e-47 |
Msa0120050 | Msa0920400 | 0.807523 | 4.849598e-50 | -8.615850e-47 |
Msa0120050 | Msa0922090 | 0.800337 | 1.511391e-48 | -8.615850e-47 |
Msa0120050 | Msa0941120 | 0.811525 | 6.703931e-51 | -8.615850e-47 |
Msa0120050 | Msa0946010 | 0.813901 | 2.024090e-51 | -8.615850e-47 |
Msa0120050 | Msa0951150 | 0.860599 | 1.846678e-63 | -8.615850e-47 |
Msa0120050 | Msa0960090 | 0.849021 | 4.224462e-60 | -8.615850e-47 |
Msa0120050 | Msa0962290 | 0.821170 | 4.656100e-53 | -8.615850e-47 |
Msa0120050 | Msa0967820 | 0.807687 | 4.475570e-50 | -8.615850e-47 |
Msa0120050 | Msa0972370 | 0.806727 | 7.149471e-50 | -8.615850e-47 |
Msa0120050 | Msa0985700 | 0.846954 | 1.569477e-59 | -8.615850e-47 |
Msa0120050 | Msa0987640 | 0.850521 | 1.609517e-60 | -8.615850e-47 |
Msa0120050 | Msa0989480 | 0.813506 | 2.472656e-51 | -8.615850e-47 |
Msa0120050 | Msa0990490 | 0.803567 | 3.278404e-49 | -8.615850e-47 |
Msa0120050 | Msa0993450 | 0.847965 | 8.278706e-60 | -8.615850e-47 |
Msa0120050 | Msa0996980 | 0.815732 | 7.950650e-52 | -8.615850e-47 |
Msa0120050 | Msa1003110 | 0.838109 | 3.494590e-57 | -8.615850e-47 |
Msa0120050 | Msa1006170 | 0.824052 | 9.944174e-54 | -8.615850e-47 |
Msa0120050 | Msa1006220 | 0.808524 | 2.969573e-50 | -8.615850e-47 |
Msa0120050 | Msa1007930 | 0.819797 | 9.617397e-53 | -8.615850e-47 |
Msa0120050 | Msa1018590 | 0.803665 | 3.128373e-49 | -8.615850e-47 |
Msa0120050 | Msa1021620 | 0.883651 | 3.747111e-71 | -8.615850e-47 |
Msa0120050 | Msa1022580 | 0.824662 | 7.146690e-54 | -8.615850e-47 |
Msa0120050 | Msa1024350 | 0.848836 | 4.755552e-60 | -8.615850e-47 |
Msa0120050 | Msa1026050 | 0.818558 | 1.841129e-52 | -8.615850e-47 |
Msa0120050 | Msa1036590 | 0.804773 | 1.839227e-49 | -8.615850e-47 |
Msa0120050 | Msa1037350 | 0.815413 | 9.364168e-52 | -8.615850e-47 |
Msa0120050 | Msa1041910 | 0.800085 | 1.700495e-48 | -8.615850e-47 |
Msa0120050 | Msa1046210 | 0.821025 | 5.028205e-53 | -8.615850e-47 |
Msa0120050 | Msa1048350 | 0.814751 | 1.313328e-51 | -8.615850e-47 |
Msa0120050 | Msa1055450 | 0.829212 | 5.841700e-55 | -8.615850e-47 |
Msa0120050 | Msa1061670 | 0.847103 | 1.429373e-59 | -8.615850e-47 |
Msa0120050 | Msa1064940 | 0.809199 | 2.128899e-50 | -8.615850e-47 |
Msa0120050 | Msa1068080 | 0.808823 | 2.562311e-50 | -8.615850e-47 |
Msa0120050 | Msa1076830 | 0.815919 | 7.221561e-52 | -8.615850e-47 |
Msa0120050 | Msa1076900 | 0.807898 | 4.035528e-50 | -8.615850e-47 |
Msa0120050 | Msa1091000 | 0.812134 | 4.939986e-51 | -8.615850e-47 |
Msa0120050 | Msa1099640 | 0.804101 | 2.539351e-49 | -8.615850e-47 |
Msa0120050 | Msa1104960 | 0.842011 | 3.354736e-58 | -8.615850e-47 |
Msa0120050 | Msa1106680 | 0.805512 | 1.288138e-49 | -8.615850e-47 |
Msa0120050 | Msa1106960 | 0.849736 | 2.671009e-60 | -8.615850e-47 |
Msa0120050 | Msa1109880 | 0.845302 | 4.421607e-59 | -8.615850e-47 |
Msa0120050 | Msa1109890 | 0.850967 | 1.205149e-60 | -8.615850e-47 |
Msa0120050 | Msa1123010 | 0.817200 | 3.729936e-52 | -8.615850e-47 |
Msa0120050 | Msa1133860 | 0.834780 | 2.459392e-56 | -8.615850e-47 |
Msa0120050 | Msa1147030 | 0.818677 | 1.730261e-52 | -8.615850e-47 |
Msa0120050 | Msa1149020 | 0.870633 | 1.258939e-66 | -8.615850e-47 |
Msa0120050 | Msa1152180 | 0.808593 | 2.869600e-50 | -8.615850e-47 |
Msa0120050 | Msa1156240 | 0.812730 | 3.660292e-51 | -8.615850e-47 |
Msa0120050 | Msa1164240 | 0.821572 | 3.759374e-53 | -8.615850e-47 |
Msa0120050 | Msa1170320 | 0.807099 | 5.962615e-50 | -8.615850e-47 |
Msa0120050 | Msa1170340 | 0.801545 | 8.561170e-49 | -8.615850e-47 |
Msa0120050 | Msa1179170 | 0.816642 | 4.978005e-52 | -8.615850e-47 |
Msa0120050 | Msa1225850 | 0.803453 | 3.461150e-49 | -8.615850e-47 |
Msa0120050 | Msa1233640 | 0.806776 | 6.978083e-50 | -8.615850e-47 |
Msa0120050 | Msa1233650 | 0.804060 | 2.589245e-49 | -8.615850e-47 |
Msa0120050 | Msa1269050 | 0.857851 | 1.231088e-62 | -8.615850e-47 |
Msa0120050 | Msa1275860 | 0.820690 | 6.002223e-53 | -8.615850e-47 |
Msa0120050 | Msa1286420 | 0.833583 | 4.907741e-56 | -8.615850e-47 |
Msa0120050 | Msa1300610 | 0.827979 | 1.159892e-54 | -8.615850e-47 |
Msa0120050 | Msa1319290 | 0.805754 | 1.145711e-49 | -8.615850e-47 |
Msa0120050 | Msa1323030 | 0.834741 | 2.514620e-56 | -8.615850e-47 |
Msa0120050 | Msa1323120 | 0.931360 | 4.237615e-94 | -8.615850e-47 |
Msa0120050 | Msa1329740 | 0.827199 | 1.784691e-54 | -8.615850e-47 |
Msa0120050 | Msa1355340 | 0.807295 | 5.420516e-50 | -8.615850e-47 |
Msa0120050 | Msa1357490 | 0.812040 | 5.177325e-51 | -8.615850e-47 |
Msa0120050 | Msa1357860 | 0.825173 | 5.415343e-54 | -8.615850e-47 |
Msa0120050 | Msa1365850 | 0.804829 | 1.790146e-49 | -8.615850e-47 |
Msa0120050 | Msa1368490 | 0.808871 | 2.502583e-50 | -8.615850e-47 |
Msa0120050 | Msa1373560 | 0.803084 | 4.125961e-49 | -8.615850e-47 |
Msa0120050 | Msa1376070 | 0.815776 | 7.774174e-52 | -8.615850e-47 |
Msa0120050 | Msa1377460 | 0.808449 | 3.080593e-50 | -8.615850e-47 |
Msa0120050 | Msa1377520 | 0.830196 | 3.365029e-55 | -8.615850e-47 |
Msa0120050 | Msa1406840 | 0.805793 | 1.124217e-49 | -8.615850e-47 |
Msa0120050 | Msa1407670 | 0.841109 | 5.798041e-58 | -8.615850e-47 |
Msa0120050 | Msa1409600 | 0.811262 | 7.642801e-51 | -8.615850e-47 |
Msa0120050 | Msa1413020 | 0.807182 | 5.726884e-50 | -8.615850e-47 |
Msa0120050 | Msa1420020 | 0.822040 | 2.930368e-53 | -8.615850e-47 |
Msa0120050 | Msa1421120 | 0.820314 | 7.323854e-53 | -8.615850e-47 |
Msa0120050 | Msa1421130 | 0.803247 | 3.818448e-49 | -8.615850e-47 |
Msa0120050 | Msa1445900 | 0.856494 | 3.097483e-62 | -8.615850e-47 |
Msa0120050 | Msa1449770 | 0.845451 | 4.028558e-59 | -8.615850e-47 |
Msa0120050 | Msa1459610 | 0.857384 | 1.693599e-62 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0120050 | MtrunA17_Chr1g0178161 | 95.918 | 196 | 8 | 0 | 1 | 196 | 1 | 196 | 2.06e-120 | 338 |
Msa0120050 | MtrunA17_Chr1g0178191 | 77.041 | 196 | 43 | 1 | 1 | 196 | 1 | 194 | 2.52e-93 | 270 |
Msa0120050 | MtrunA17_Chr1g0178181 | 80.102 | 196 | 38 | 1 | 1 | 196 | 1 | 195 | 9.05e-92 | 266 |
Msa0120050 | MtrunA17_Chr2g0321671 | 52.857 | 210 | 83 | 1 | 2 | 195 | 10 | 219 | 1.81e-59 | 185 |
Msa0120050 | MtrunA17_Chr7g0217691 | 45.263 | 190 | 100 | 1 | 7 | 196 | 1 | 186 | 2.62e-52 | 166 |
Msa0120050 | MtrunA17_Chr4g0042551 | 42.197 | 173 | 100 | 0 | 23 | 195 | 44 | 216 | 2.93e-47 | 154 |
Msa0120050 | MtrunA17_Chr5g0417761 | 40.722 | 194 | 102 | 2 | 4 | 196 | 5 | 186 | 1.15e-41 | 139 |
Msa0120050 | MtrunA17_Chr4g0021111 | 34.615 | 156 | 87 | 4 | 37 | 189 | 7 | 150 | 3.16e-18 | 77.8 |
Msa0120050 | MtrunA17_Chr2g0303151 | 34.167 | 120 | 73 | 3 | 73 | 189 | 69 | 185 | 1.27e-12 | 63.9 |
Msa0120050 | MtrunA17_Chr3g0109681 | 27.564 | 156 | 96 | 3 | 42 | 193 | 49 | 191 | 3.74e-11 | 60.1 |
Msa0120050 | MtrunA17_Chr8g0381001 | 29.114 | 158 | 99 | 4 | 42 | 189 | 30 | 184 | 5.02e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0120050 | AT2G36100.1 | 54.950 | 202 | 84 | 2 | 2 | 196 | 5 | 206 | 3.36e-68 | 207 |
Msa0120050 | AT3G11550.1 | 60.500 | 200 | 74 | 1 | 2 | 196 | 5 | 204 | 2.83e-64 | 197 |
Msa0120050 | AT2G27370.1 | 55.978 | 184 | 74 | 1 | 12 | 195 | 43 | 219 | 7.01e-64 | 197 |
Msa0120050 | AT5G06200.1 | 58.586 | 198 | 77 | 2 | 2 | 195 | 5 | 201 | 1.07e-63 | 196 |
Msa0120050 | AT5G15290.1 | 44.000 | 150 | 84 | 0 | 27 | 176 | 17 | 166 | 4.72e-44 | 145 |
Msa0120050 | AT1G14160.1 | 40.000 | 165 | 99 | 0 | 32 | 196 | 45 | 209 | 8.61e-42 | 140 |
Msa0120050 | AT1G03700.1 | 30.769 | 169 | 99 | 3 | 21 | 189 | 1 | 151 | 2.00e-17 | 76.3 |
Msa0120050 | AT1G17200.1 | 26.984 | 189 | 125 | 5 | 9 | 193 | 2 | 181 | 2.42e-14 | 68.9 |
Msa0120050 | AT4G03540.1 | 32.258 | 124 | 75 | 2 | 55 | 178 | 26 | 140 | 1.09e-13 | 66.2 |
Msa0120050 | AT3G06390.1 | 27.820 | 133 | 91 | 2 | 38 | 165 | 37 | 169 | 5.83e-11 | 59.7 |
Find 42 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGCCATTTGCAACCAATT+TGG | 0.187527 | 1_3:+44696441 | Msa0120050:CDS |
GTTGGTTGTGATGTCTTCTT+TGG | 0.281389 | 1_3:+44696530 | Msa0120050:CDS |
GTGATGTCTTCTTTGGCTCT+TGG | 0.299534 | 1_3:+44696537 | Msa0120050:CDS |
TCTTAGAACAAAATCCATTA+TGG | 0.318159 | 1_3:-44695374 | None:intergenic |
ATGATGGTTACTATGGAAAA+TGG | 0.329026 | 1_3:-44695783 | None:intergenic |
TGATGTCTTCTTTGGCTCTT+GGG | 0.348436 | 1_3:+44696538 | Msa0120050:CDS |
AGCAGCTGCCATGGTTTACT+TGG | 0.359773 | 1_3:+44696389 | Msa0120050:CDS |
GGCATTTGTGGGTGGCTACC+TGG | 0.401958 | 1_3:+44695749 | Msa0120050:CDS |
AATGTCAACCACTATTGATA+TGG | 0.415102 | 1_3:+44695267 | None:intergenic |
AGGGCGAATGATGGTTACTA+TGG | 0.422728 | 1_3:-44695790 | None:intergenic |
CATAACTAGCTTCAAATTGA+AGG | 0.426220 | 1_3:-44695477 | None:intergenic |
ATTGGAGCCACTGCAAGGCC+TGG | 0.429435 | 1_3:+44695331 | Msa0120050:CDS |
ATGGCAATCAAGACTCAAAC+TGG | 0.433393 | 1_3:+44696418 | Msa0120050:CDS |
ATCTCCAAATTGGTTGCAAA+TGG | 0.439108 | 1_3:-44696445 | None:intergenic |
TGTTATTGCAATGGCATTTG+TGG | 0.446696 | 1_3:+44695737 | Msa0120050:CDS |
GTTATTGCAATGGCATTTGT+GGG | 0.458726 | 1_3:+44695738 | Msa0120050:CDS |
TGATTCTGCCATATCAATAG+TGG | 0.478795 | 1_3:-44695275 | None:intergenic |
ATCATTCGCCCTCATGCACC+TGG | 0.484461 | 1_3:+44695801 | Msa0120050:CDS |
TGGTTACTATGGAAAATGGT+AGG | 0.486275 | 1_3:-44695779 | None:intergenic |
TGGTGCTTCAGCAGCTGCCA+TGG | 0.489524 | 1_3:+44696380 | Msa0120050:CDS |
TGAAGGAACTGAGTGAAGAA+AGG | 0.493692 | 1_3:-44695460 | None:intergenic |
CCACTGCAAGGCCTGGAGGA+TGG | 0.524990 | 1_3:+44695338 | Msa0120050:CDS |
TGCAGCAAGAGAAGCTGCTA+TGG | 0.527344 | 1_3:-44695404 | None:intergenic |
CCATCCTCCAGGCCTTGCAG+TGG | 0.532661 | 1_3:-44695338 | None:intergenic |
ATGAGGAAAAGCCTTGGTCC+AGG | 0.542585 | 1_3:-44695819 | None:intergenic |
CTTTAATTGGAGCCACTGCA+AGG | 0.554612 | 1_3:+44695326 | Msa0120050:CDS |
GGTTACTATGGAAAATGGTA+GGG | 0.561081 | 1_3:-44695778 | None:intergenic |
AGCCTTGGTCCAGGTGCATG+AGG | 0.573726 | 1_3:-44695810 | None:intergenic |
AGGTGCATGAGGGCGAATGA+TGG | 0.573876 | 1_3:-44695799 | None:intergenic |
GCCCTCATGCACCTGGACCA+AGG | 0.587519 | 1_3:+44695808 | Msa0120050:CDS |
TGCTGAAGCACCACTAGCAG+TGG | 0.592321 | 1_3:-44696370 | None:intergenic |
AATCTGATCACTAGTTGCCA+TGG | 0.596028 | 1_3:-44695434 | None:intergenic |
ATTGCAATGGCATTTGTGGG+TGG | 0.596308 | 1_3:+44695741 | Msa0120050:CDS |
ATGACATTAGCCACTGCTAG+TGG | 0.602800 | 1_3:+44696360 | Msa0120050:CDS |
ATGGTTTACTTGGCACACAA+TGG | 0.608727 | 1_3:+44696399 | Msa0120050:CDS |
GCGATGATGAGGAAAAGCCT+TGG | 0.613791 | 1_3:-44695825 | None:intergenic |
GCCTTGGTCCAGGTGCATGA+GGG | 0.623258 | 1_3:-44695809 | None:intergenic |
GGAGCCACTGCAAGGCCTGG+AGG | 0.665040 | 1_3:+44695334 | Msa0120050:CDS |
TTACTGTGTCTGCGATGATG+AGG | 0.667059 | 1_3:-44695836 | None:intergenic |
TCTTGCTGCAACTATCACCA+TGG | 0.694318 | 1_3:+44695417 | Msa0120050:CDS |
AAAATGGTAGGGATAAGACC+AGG | 0.708096 | 1_3:-44695767 | None:intergenic |
ATTGTGTGCCAAGTAAACCA+TGG | 0.791669 | 1_3:-44696397 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTATTTGTTTAAGTTAG+AGG | - | chr1_3:44695538-44695557 | None:intergenic | 15.0% |
!! | TAAGAATTAATTAGGAAATT+AGG | - | chr1_3:44695869-44695888 | None:intergenic | 15.0% |
!! | ACTCTAATTAAGAATTAATT+AGG | - | chr1_3:44695877-44695896 | None:intergenic | 15.0% |
!! | TCATGTAAAAAAAATTTGAA+GGG | - | chr1_3:44695920-44695939 | None:intergenic | 15.0% |
!! | TTCATGTAAAAAAAATTTGA+AGG | - | chr1_3:44695921-44695940 | None:intergenic | 15.0% |
!! | AAAAAAAATCAATAAAGCAA+TGG | - | chr1_3:44696026-44696045 | None:intergenic | 15.0% |
!!! | AGAAACTATTATTTTAAAAG+TGG | + | chr1_3:44696250-44696269 | Msa0120050:intron | 15.0% |
!!! | AAATTATTTGTTTAAGTTAG+AGG | - | chr1_3:44695538-44695557 | None:intergenic | 15.0% |
!! | TAAGAATTAATTAGGAAATT+AGG | - | chr1_3:44695869-44695888 | None:intergenic | 15.0% |
!! | ACTCTAATTAAGAATTAATT+AGG | - | chr1_3:44695877-44695896 | None:intergenic | 15.0% |
!! | TCATGTAAAAAAAATTTGAA+GGG | - | chr1_3:44695920-44695939 | None:intergenic | 15.0% |
!! | TTCATGTAAAAAAAATTTGA+AGG | - | chr1_3:44695921-44695940 | None:intergenic | 15.0% |
!! | AAAAAAAATCAATAAAGCAA+TGG | - | chr1_3:44696026-44696045 | None:intergenic | 15.0% |
!!! | AGAAACTATTATTTTAAAAG+TGG | + | chr1_3:44696250-44696269 | Msa0120050:intron | 15.0% |
!! | AATGTTTATTGTAAATATGC+AGG | + | chr1_3:44695709-44695728 | Msa0120050:intron | 20.0% |
!! | ATGAACATATATATTCTAGT+AGG | + | chr1_3:44695936-44695955 | Msa0120050:intron | 20.0% |
!!! | GTTAAGTACTTTTAAAAAAC+TGG | + | chr1_3:44696221-44696240 | Msa0120050:intron | 20.0% |
!! | AATGTTTATTGTAAATATGC+AGG | + | chr1_3:44695709-44695728 | Msa0120050:intron | 20.0% |
!! | ATGAACATATATATTCTAGT+AGG | + | chr1_3:44695936-44695955 | Msa0120050:intron | 20.0% |
!!! | GTTAAGTACTTTTAAAAAAC+TGG | + | chr1_3:44696221-44696240 | Msa0120050:intron | 20.0% |
!! | AATGAAAAAGCTGCTTTAAT+TGG | + | chr1_3:44695313-44695332 | Msa0120050:CDS | 25.0% |
! | TCTTAGAACAAAATCCATTA+TGG | - | chr1_3:44695377-44695396 | None:intergenic | 25.0% |
!!! | ATGGATTTTGTTCTAAGATT+AGG | + | chr1_3:44695379-44695398 | Msa0120050:CDS | 25.0% |
! | GGTCATTTGAAAATAAATAG+AGG | - | chr1_3:44696005-44696024 | None:intergenic | 25.0% |
! | AATGAGGAAATGAACTATTA+AGG | + | chr1_3:44696136-44696155 | Msa0120050:intron | 25.0% |
!! | AATGAAAAAGCTGCTTTAAT+TGG | + | chr1_3:44695313-44695332 | Msa0120050:CDS | 25.0% |
! | TCTTAGAACAAAATCCATTA+TGG | - | chr1_3:44695377-44695396 | None:intergenic | 25.0% |
!!! | ATGGATTTTGTTCTAAGATT+AGG | + | chr1_3:44695379-44695398 | Msa0120050:CDS | 25.0% |
! | GGTCATTTGAAAATAAATAG+AGG | - | chr1_3:44696005-44696024 | None:intergenic | 25.0% |
! | AATGAGGAAATGAACTATTA+AGG | + | chr1_3:44696136-44696155 | Msa0120050:intron | 25.0% |
! | CATAACTAGCTTCAAATTGA+AGG | - | chr1_3:44695480-44695499 | None:intergenic | 30.0% |
! | AATACACCTAGGTTTTACAA+TGG | - | chr1_3:44695572-44695591 | None:intergenic | 30.0% |
TGGACTAAATAAATACACCT+AGG | - | chr1_3:44695583-44695602 | None:intergenic | 30.0% | |
! | GTGTAGTTCAAATTTTGTGT+TGG | - | chr1_3:44695603-44695622 | None:intergenic | 30.0% |
!!! | CAGGTTTTTTGTTATTGCAA+TGG | + | chr1_3:44695728-44695747 | Msa0120050:intron | 30.0% |
ATGATGGTTACTATGGAAAA+TGG | - | chr1_3:44695786-44695805 | None:intergenic | 30.0% | |
ATTACTCCTTGTGTTTCTTT+CGG | + | chr1_3:44695979-44695998 | Msa0120050:intron | 30.0% | |
GAAGATAAATTGCTACAATG+AGG | + | chr1_3:44696120-44696139 | Msa0120050:intron | 30.0% | |
TAATGTCATAAACACCTACA+CGG | - | chr1_3:44696349-44696368 | None:intergenic | 30.0% | |
!!! | TATTGCTGTGGTTGTTTTAA+TGG | + | chr1_3:44696506-44696525 | Msa0120050:CDS | 30.0% |
! | CATAACTAGCTTCAAATTGA+AGG | - | chr1_3:44695480-44695499 | None:intergenic | 30.0% |
! | AATACACCTAGGTTTTACAA+TGG | - | chr1_3:44695572-44695591 | None:intergenic | 30.0% |
TGGACTAAATAAATACACCT+AGG | - | chr1_3:44695583-44695602 | None:intergenic | 30.0% | |
! | GTGTAGTTCAAATTTTGTGT+TGG | - | chr1_3:44695603-44695622 | None:intergenic | 30.0% |
!!! | CAGGTTTTTTGTTATTGCAA+TGG | + | chr1_3:44695728-44695747 | Msa0120050:intron | 30.0% |
ATGATGGTTACTATGGAAAA+TGG | - | chr1_3:44695786-44695805 | None:intergenic | 30.0% | |
ATTACTCCTTGTGTTTCTTT+CGG | + | chr1_3:44695979-44695998 | Msa0120050:intron | 30.0% | |
GAAGATAAATTGCTACAATG+AGG | + | chr1_3:44696120-44696139 | Msa0120050:intron | 30.0% | |
TAATGTCATAAACACCTACA+CGG | - | chr1_3:44696349-44696368 | None:intergenic | 30.0% | |
!!! | TATTGCTGTGGTTGTTTTAA+TGG | + | chr1_3:44696506-44696525 | Msa0120050:CDS | 30.0% |
TGATTCTGCCATATCAATAG+TGG | - | chr1_3:44695278-44695297 | None:intergenic | 35.0% | |
! | GAAAAAAGGCATAGCCATAA+TGG | + | chr1_3:44695360-44695379 | Msa0120050:CDS | 35.0% |
GAGGTTTAAATGTGACATAC+TGG | - | chr1_3:44695519-44695538 | None:intergenic | 35.0% | |
TGTTATTGCAATGGCATTTG+TGG | + | chr1_3:44695737-44695756 | Msa0120050:CDS | 35.0% | |
GTTATTGCAATGGCATTTGT+GGG | + | chr1_3:44695738-44695757 | Msa0120050:CDS | 35.0% | |
GGTTACTATGGAAAATGGTA+GGG | - | chr1_3:44695781-44695800 | None:intergenic | 35.0% | |
TGGTTACTATGGAAAATGGT+AGG | - | chr1_3:44695782-44695801 | None:intergenic | 35.0% | |
! | AAACTCAAACTTTTCCGTGT+AGG | + | chr1_3:44696332-44696351 | Msa0120050:intron | 35.0% |
ATCTCCAAATTGGTTGCAAA+TGG | - | chr1_3:44696448-44696467 | None:intergenic | 35.0% | |
GAGCACAAAAATCTCCAAAT+TGG | - | chr1_3:44696458-44696477 | None:intergenic | 35.0% | |
! | GATTTTTGTGCTCAAACAAG+TGG | + | chr1_3:44696465-44696484 | Msa0120050:CDS | 35.0% |
!! | TGTGTCATGTTTTATTGCTG+TGG | + | chr1_3:44696494-44696513 | Msa0120050:CDS | 35.0% |
!!! | TGTGGTTGTTTTAATGGTGT+TGG | + | chr1_3:44696512-44696531 | Msa0120050:CDS | 35.0% |
TGATTCTGCCATATCAATAG+TGG | - | chr1_3:44695278-44695297 | None:intergenic | 35.0% | |
! | GAAAAAAGGCATAGCCATAA+TGG | + | chr1_3:44695360-44695379 | Msa0120050:CDS | 35.0% |
GAGGTTTAAATGTGACATAC+TGG | - | chr1_3:44695519-44695538 | None:intergenic | 35.0% | |
TGTTATTGCAATGGCATTTG+TGG | + | chr1_3:44695737-44695756 | Msa0120050:CDS | 35.0% | |
GTTATTGCAATGGCATTTGT+GGG | + | chr1_3:44695738-44695757 | Msa0120050:CDS | 35.0% | |
GGTTACTATGGAAAATGGTA+GGG | - | chr1_3:44695781-44695800 | None:intergenic | 35.0% | |
TGGTTACTATGGAAAATGGT+AGG | - | chr1_3:44695782-44695801 | None:intergenic | 35.0% | |
! | AAACTCAAACTTTTCCGTGT+AGG | + | chr1_3:44696332-44696351 | Msa0120050:intron | 35.0% |
ATCTCCAAATTGGTTGCAAA+TGG | - | chr1_3:44696448-44696467 | None:intergenic | 35.0% | |
GAGCACAAAAATCTCCAAAT+TGG | - | chr1_3:44696458-44696477 | None:intergenic | 35.0% | |
! | GATTTTTGTGCTCAAACAAG+TGG | + | chr1_3:44696465-44696484 | Msa0120050:CDS | 35.0% |
!! | TGTGTCATGTTTTATTGCTG+TGG | + | chr1_3:44696494-44696513 | Msa0120050:CDS | 35.0% |
!!! | TGTGGTTGTTTTAATGGTGT+TGG | + | chr1_3:44696512-44696531 | Msa0120050:CDS | 35.0% |
AATCTGATCACTAGTTGCCA+TGG | - | chr1_3:44695437-44695456 | None:intergenic | 40.0% | |
TGAAGGAACTGAGTGAAGAA+AGG | - | chr1_3:44695463-44695482 | None:intergenic | 40.0% | |
! | CACCTAGGTTTTACAATGGA+GGG | - | chr1_3:44695568-44695587 | None:intergenic | 40.0% |
! | ACACCTAGGTTTTACAATGG+AGG | - | chr1_3:44695569-44695588 | None:intergenic | 40.0% |
AAAATGGTAGGGATAAGACC+AGG | - | chr1_3:44695770-44695789 | None:intergenic | 40.0% | |
ATTGTGTGCCAAGTAAACCA+TGG | - | chr1_3:44696400-44696419 | None:intergenic | 40.0% | |
ATGGTTTACTTGGCACACAA+TGG | + | chr1_3:44696399-44696418 | Msa0120050:CDS | 40.0% | |
ATGGCAATCAAGACTCAAAC+TGG | + | chr1_3:44696418-44696437 | Msa0120050:CDS | 40.0% | |
! | CTTGCCATTTGCAACCAATT+TGG | + | chr1_3:44696441-44696460 | Msa0120050:CDS | 40.0% |
GTTGGTTGTGATGTCTTCTT+TGG | + | chr1_3:44696530-44696549 | Msa0120050:CDS | 40.0% | |
!! | TGATGTCTTCTTTGGCTCTT+GGG | + | chr1_3:44696538-44696557 | Msa0120050:CDS | 40.0% |
AATCTGATCACTAGTTGCCA+TGG | - | chr1_3:44695437-44695456 | None:intergenic | 40.0% | |
TGAAGGAACTGAGTGAAGAA+AGG | - | chr1_3:44695463-44695482 | None:intergenic | 40.0% | |
! | CACCTAGGTTTTACAATGGA+GGG | - | chr1_3:44695568-44695587 | None:intergenic | 40.0% |
! | ACACCTAGGTTTTACAATGG+AGG | - | chr1_3:44695569-44695588 | None:intergenic | 40.0% |
AAAATGGTAGGGATAAGACC+AGG | - | chr1_3:44695770-44695789 | None:intergenic | 40.0% | |
ATTGTGTGCCAAGTAAACCA+TGG | - | chr1_3:44696400-44696419 | None:intergenic | 40.0% | |
ATGGTTTACTTGGCACACAA+TGG | + | chr1_3:44696399-44696418 | Msa0120050:CDS | 40.0% | |
ATGGCAATCAAGACTCAAAC+TGG | + | chr1_3:44696418-44696437 | Msa0120050:CDS | 40.0% | |
! | CTTGCCATTTGCAACCAATT+TGG | + | chr1_3:44696441-44696460 | Msa0120050:CDS | 40.0% |
GTTGGTTGTGATGTCTTCTT+TGG | + | chr1_3:44696530-44696549 | Msa0120050:CDS | 40.0% | |
!! | TGATGTCTTCTTTGGCTCTT+GGG | + | chr1_3:44696538-44696557 | Msa0120050:CDS | 40.0% |
CTTTAATTGGAGCCACTGCA+AGG | + | chr1_3:44695326-44695345 | Msa0120050:CDS | 45.0% | |
!!! | ATGCCTTTTTTCCATCCTCC+AGG | - | chr1_3:44695352-44695371 | None:intergenic | 45.0% |
TCTTGCTGCAACTATCACCA+TGG | + | chr1_3:44695417-44695436 | Msa0120050:CDS | 45.0% | |
CTCCCTCCATTGTAAAACCT+AGG | + | chr1_3:44695563-44695582 | Msa0120050:intron | 45.0% | |
ATTGCAATGGCATTTGTGGG+TGG | + | chr1_3:44695741-44695760 | Msa0120050:CDS | 45.0% | |
AGGGCGAATGATGGTTACTA+TGG | - | chr1_3:44695793-44695812 | None:intergenic | 45.0% | |
TTACTGTGTCTGCGATGATG+AGG | - | chr1_3:44695839-44695858 | None:intergenic | 45.0% | |
TAGAGGCCGAAAGAAACACA+AGG | - | chr1_3:44695988-44696007 | None:intergenic | 45.0% | |
ATGACATTAGCCACTGCTAG+TGG | + | chr1_3:44696360-44696379 | Msa0120050:CDS | 45.0% | |
!! | GTGATGTCTTCTTTGGCTCT+TGG | + | chr1_3:44696537-44696556 | Msa0120050:CDS | 45.0% |
CTTTAATTGGAGCCACTGCA+AGG | + | chr1_3:44695326-44695345 | Msa0120050:CDS | 45.0% | |
!!! | ATGCCTTTTTTCCATCCTCC+AGG | - | chr1_3:44695352-44695371 | None:intergenic | 45.0% |
TCTTGCTGCAACTATCACCA+TGG | + | chr1_3:44695417-44695436 | Msa0120050:CDS | 45.0% | |
CTCCCTCCATTGTAAAACCT+AGG | + | chr1_3:44695563-44695582 | Msa0120050:intron | 45.0% | |
ATTGCAATGGCATTTGTGGG+TGG | + | chr1_3:44695741-44695760 | Msa0120050:CDS | 45.0% | |
AGGGCGAATGATGGTTACTA+TGG | - | chr1_3:44695793-44695812 | None:intergenic | 45.0% | |
TTACTGTGTCTGCGATGATG+AGG | - | chr1_3:44695839-44695858 | None:intergenic | 45.0% | |
TAGAGGCCGAAAGAAACACA+AGG | - | chr1_3:44695988-44696007 | None:intergenic | 45.0% | |
ATGACATTAGCCACTGCTAG+TGG | + | chr1_3:44696360-44696379 | Msa0120050:CDS | 45.0% | |
!! | GTGATGTCTTCTTTGGCTCT+TGG | + | chr1_3:44696537-44696556 | Msa0120050:CDS | 45.0% |
AGGCCTGGAGGATGGAAAAA+AGG | + | chr1_3:44695346-44695365 | Msa0120050:CDS | 50.0% | |
TGCAGCAAGAGAAGCTGCTA+TGG | - | chr1_3:44695407-44695426 | None:intergenic | 50.0% | |
ATGAGGAAAAGCCTTGGTCC+AGG | - | chr1_3:44695822-44695841 | None:intergenic | 50.0% | |
GCGATGATGAGGAAAAGCCT+TGG | - | chr1_3:44695828-44695847 | None:intergenic | 50.0% | |
AGCAGCTGCCATGGTTTACT+TGG | + | chr1_3:44696389-44696408 | Msa0120050:CDS | 50.0% | |
AGGCCTGGAGGATGGAAAAA+AGG | + | chr1_3:44695346-44695365 | Msa0120050:CDS | 50.0% | |
TGCAGCAAGAGAAGCTGCTA+TGG | - | chr1_3:44695407-44695426 | None:intergenic | 50.0% | |
ATGAGGAAAAGCCTTGGTCC+AGG | - | chr1_3:44695822-44695841 | None:intergenic | 50.0% | |
GCGATGATGAGGAAAAGCCT+TGG | - | chr1_3:44695828-44695847 | None:intergenic | 50.0% | |
AGCAGCTGCCATGGTTTACT+TGG | + | chr1_3:44696389-44696408 | Msa0120050:CDS | 50.0% | |
AGGTGCATGAGGGCGAATGA+TGG | - | chr1_3:44695802-44695821 | None:intergenic | 55.0% | |
ATCATTCGCCCTCATGCACC+TGG | + | chr1_3:44695801-44695820 | Msa0120050:CDS | 55.0% | |
! | TGCTGAAGCACCACTAGCAG+TGG | - | chr1_3:44696373-44696392 | None:intergenic | 55.0% |
AGGTGCATGAGGGCGAATGA+TGG | - | chr1_3:44695802-44695821 | None:intergenic | 55.0% | |
ATCATTCGCCCTCATGCACC+TGG | + | chr1_3:44695801-44695820 | Msa0120050:CDS | 55.0% | |
! | TGCTGAAGCACCACTAGCAG+TGG | - | chr1_3:44696373-44696392 | None:intergenic | 55.0% |
ATTGGAGCCACTGCAAGGCC+TGG | + | chr1_3:44695331-44695350 | Msa0120050:CDS | 60.0% | |
GGCATTTGTGGGTGGCTACC+TGG | + | chr1_3:44695749-44695768 | Msa0120050:CDS | 60.0% | |
GCCTTGGTCCAGGTGCATGA+GGG | - | chr1_3:44695812-44695831 | None:intergenic | 60.0% | |
AGCCTTGGTCCAGGTGCATG+AGG | - | chr1_3:44695813-44695832 | None:intergenic | 60.0% | |
TGGTGCTTCAGCAGCTGCCA+TGG | + | chr1_3:44696380-44696399 | Msa0120050:CDS | 60.0% | |
ATTGGAGCCACTGCAAGGCC+TGG | + | chr1_3:44695331-44695350 | Msa0120050:CDS | 60.0% | |
GGCATTTGTGGGTGGCTACC+TGG | + | chr1_3:44695749-44695768 | Msa0120050:CDS | 60.0% | |
GCCTTGGTCCAGGTGCATGA+GGG | - | chr1_3:44695812-44695831 | None:intergenic | 60.0% | |
AGCCTTGGTCCAGGTGCATG+AGG | - | chr1_3:44695813-44695832 | None:intergenic | 60.0% | |
TGGTGCTTCAGCAGCTGCCA+TGG | + | chr1_3:44696380-44696399 | Msa0120050:CDS | 60.0% | |
CCATCCTCCAGGCCTTGCAG+TGG | - | chr1_3:44695341-44695360 | None:intergenic | 65.0% | |
CCACTGCAAGGCCTGGAGGA+TGG | + | chr1_3:44695338-44695357 | Msa0120050:CDS | 65.0% | |
GCCCTCATGCACCTGGACCA+AGG | + | chr1_3:44695808-44695827 | Msa0120050:CDS | 65.0% | |
CCATCCTCCAGGCCTTGCAG+TGG | - | chr1_3:44695341-44695360 | None:intergenic | 65.0% | |
CCACTGCAAGGCCTGGAGGA+TGG | + | chr1_3:44695338-44695357 | Msa0120050:CDS | 65.0% | |
GCCCTCATGCACCTGGACCA+AGG | + | chr1_3:44695808-44695827 | Msa0120050:CDS | 65.0% | |
GGAGCCACTGCAAGGCCTGG+AGG | + | chr1_3:44695334-44695353 | Msa0120050:CDS | 70.0% | |
GGAGCCACTGCAAGGCCTGG+AGG | + | chr1_3:44695334-44695353 | Msa0120050:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 44695268 | 44696569 | 44695268 | ID=Msa0120050;Name=Msa0120050 |
chr1_3 | mRNA | 44695268 | 44696569 | 44695268 | ID=Msa0120050-mRNA-1;Parent=Msa0120050;Name=Msa0120050-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|196 |
chr1_3 | exon | 44695268 | 44695518 | 44695268 | ID=Msa0120050-mRNA-1:exon:13323;Parent=Msa0120050-mRNA-1 |
chr1_3 | exon | 44695731 | 44695854 | 44695731 | ID=Msa0120050-mRNA-1:exon:13324;Parent=Msa0120050-mRNA-1 |
chr1_3 | exon | 44696354 | 44696569 | 44696354 | ID=Msa0120050-mRNA-1:exon:13325;Parent=Msa0120050-mRNA-1 |
chr1_3 | CDS | 44695268 | 44695518 | 44695268 | ID=Msa0120050-mRNA-1:cds;Parent=Msa0120050-mRNA-1 |
chr1_3 | CDS | 44695731 | 44695854 | 44695731 | ID=Msa0120050-mRNA-1:cds;Parent=Msa0120050-mRNA-1 |
chr1_3 | CDS | 44696354 | 44696569 | 44696354 | ID=Msa0120050-mRNA-1:cds;Parent=Msa0120050-mRNA-1 |
Gene Sequence |
Protein sequence |